Pregenerated sensors for CYB561 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019590Ensembl transcript IDs: ENSMUST00000019734.11, ENSMUST00000143251.8, ENSMUST00000150563.3, ENSMUST00000183493.8, ENSMUST00000184086.8, ENSMUST00000184269.3
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGTCCTACTGTCCAGCGATGATGGACCCAGGGCTGGGAGGACCATaGTCCCTCAGGGCTGCTTCAACCAAGACAGGGCACCCCAAGCCA | + |
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Preference number: 1 (lower is better) Translates to: QSYCPAMMDPGLGGP*SLRAASTKTGHPKP Trigger: TGGCTTGGGGTGCCCTGTCTTGGTTGAAGCAGCCCTGAGGGATCATGGTCCTCCCAGCCCTGGGTCCATCATCGCTGGACAGTAGGACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019734.11 |
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| 3UTR TCA 90 bp | AGGGCCAGGCTTGACCCCAGATCCCCTAACCAAGCTTTCTGCACGTaGACGGACAACAGCGGGTACAGGCAGACAGAGCCTACTCAGGGC | + |
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Preference number: 1 (lower is better) Translates to: RARLDPRSPNQAFCT*TDNSGYRQTEPTQG Trigger: GCCCTGAGTAGGCTCTGTCTGCCTGTACCCGCTGTTGTCCGTTCACGTGCAGAAAGCTTGGTTAGGGGATCTGGGGTCAAGCCTGGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019734.11 ENSMUST00000183493.8 ENSMUST00000184086.8 |
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| 3UTR GCA 90 bp | GGAACTCCTGGGTTGAATACACAAAGCAGCGGTCTGACTTCTCCATaGCAGTCCCTCAGGCCCAGGCCCAGCAGCCATCTGCTGCATGGA | + |
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Preference number: 1 (lower is better) Translates to: GTPGLNTQSSGLTSP*QSLRPRPSSHLLHG Trigger: TCCATGCAGCAGATGGCTGCTGGGCCTGGGCCTGAGGGACTGGCATGGAGAAGTCAGACCGCTGCTTTGTGTATTCAACCCAGGAGTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019734.11 ENSMUST00000183493.8 |
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| 3UTR TCA 90 bp | ACCAATCCCGTTCCTCTCTTCCACTTCAGTCCTACTGTCCAGCGATaGTGGACCCAGGGCTGGGAGGACCATGATCCCTCAGGGCTGCTT | + |
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Preference number: 1 (lower is better) Translates to: TNPVPLFHFSPTVQR*WTQGWEDHDPSGLL Trigger: AAGCAGCCCTGAGGGATCATGGTCCTCCCAGCCCTGGGTCCATCATCGCTGGACAGTAGGACTGAAGTGGAAGAGAGGAACGGGATTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019734.11 |
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| 3UTR GCA 90 bp | ACACAGCCCCACACTCACACTCCTGGACCTAAGAGACTCAGTGTCTaGAGGGAAGAGCAAAAAGATATCTGGAAACCCACAGAGCCAAGA | + |
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Preference number: 1 (lower is better) Translates to: TQPHTHTPGPKRLSV*REEQKDIWKPTEPR Trigger: TCTTGGCTCTGTGGGTTTCCAGATATCTTTTTGCTCTTCCCTGCAGACACTGAGTCTCTTAGGTCCAGGAGTGTGAGTGTGGGGCTGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019734.11 ENSMUST00000183493.8 ENSMUST00000184086.8 |
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| 3UTR GCA 90 bp | GCATATTTTACACATAATATCACTTGCTCTACTGCCAAGGACACATaGTTCCCAAGCTGCTGGAACTCCTGGGTTGAATACACAAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: AYFTHNITCSTAKDT*FPSCWNSWVEYTKQ Trigger: CTGCTTTGTGTATTCAACCCAGGAGTTCCAGCAGCTTGGGAAGCATGTGTCCTTGGCAGTAGAGCAAGTGATATTATGTGTAAAATATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019734.11 |
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| 3UTR CAA 90 bp | GAGGGCGATCACTGGGGACTGGGGCTGTCTCCCTCCGTGAGTGTCTaGAAGTCCATGGAGAGGGCTTGCTCTTCAGCCTGGGAAGGCCGC | + |
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Preference number: 2 (lower is better) Translates to: EGDHWGLGLSPSVSV*KSMERACSSAWEGR Trigger: GCGGCCTTCCCAGGCTGAAGAGCAAGCCCTCTCCATGGACTTCAAGACACTCACGGAGGGAGACAGCCCCAGTCCCCAGTGATCGCCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000183493.8 ENSMUST00000184086.8 |
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| 3UTR CAA 90 bp | GGGGCTGTCTCCCTCCGTGAGTGTCTTGAAGTCCATGGAGAGGGCTaGCTCTTCAGCCTGGGAAGGCCGCTTCCAGTCAGCCTGAGCCAA | + |
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Preference number: 2 (lower is better) Translates to: GAVSLRECLEVHGEG*LFSLGRPLPVSLSQ Trigger: TTGGCTCAGGCTGACTGGAAGCGGCCTTCCCAGGCTGAAGAGCAAGCCCTCTCCATGGACTTCAAGACACTCACGGAGGGAGACAGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000183493.8 ENSMUST00000184086.8 |
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| 3UTR-3UTR CCA 90 bp | CTTTCTGCACGTGAACGGACAACAGCGGGTACAGGCAGACAGAGCCTACTCAGGGCTTGCTCTTCAGCCTaGGAAGGCCGCTTCCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: LSARERTTAGTGRQSLLRACSSA*EGRFQS Trigger: TGACTGGAAGCGGCCTTCCCAGGCTGAAGAGCAAGC...CCTGAGTAGGCTCTGTCTGCCTGTACCCGCTGTTGTCCGTTCACGTGCAGAAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000183493.8 ENSMUST00000184086.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGCTGCATGGAGGGCGGAGCTATTGTCTAGCTCCAATAGGGATCAGGGCCAGCAGCCATCTGCTGCATaGAGGGCGGAGCTATTGTCT | + |
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Preference number: 2 (lower is better) Translates to: SAAWRAELLSSSNRDQGQQPSAA*RAELLS Trigger: AGACAATAGCTCCGCCCTCCATGCAGCAGATGGCTG...CTGGCCCTGATCCCTATTGGAGCTAGACAATAGCTCCGCCCTCCATGCAGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019734.11 ENSMUST00000183493.8 |
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| 3UTR CAA 90 bp | CAGAAAGGCCTAAAGACTGTAGCCAACCCACACGCCAAGGCTCCTTaGGGAGCCAGAGTCAACCTTTCTGGGGAGCCTTCCTCTGAACAC | + |
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Preference number: 2 (lower is better) Translates to: QKGLKTVANPHAKAP*GARVNLSGEPSSEH Trigger: GTGTTCAGAGGAAGGCTCCCCAGAAAGGTTGACTCTGGCTCCCAAAGGAGCCTTGGCGTGTGGGTTGGCTACAGTCTTTAGGCCTTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019734.11 |
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| 3UTR-3UTR TCA 90 bp | CAGCAGCCATCTGCTGCATGGAGGGCGGAGCTATTGTCTAGCTCCAATAGGGATGGGAGGAAGGGAGACTaGGAACAACTCCAAAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: QQPSAAWRAELLSSSNRDGRKGD*EQLQSL Trigger: CAGGCTTTGGAGTTGTTCTCAGTCTCCCTTCCTCCC...ATCCCTATTGGAGCTAGACAATAGCTCCGCCCTCCATGCAGCAGATGGCTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019734.11 ENSMUST00000183493.8 |
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| 3UTR-3UTR GCA 90 bp | GCTCTTCAGCCTGGGAAGGCCGCTTCCAGTCAGCCTGAGCCAAGATGTAGAGCACCTCAGGTTCAAACGTaGTGTACTTGGACCCCAATT | + |
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Preference number: 2 (lower is better) Translates to: ALQPGKAASSQPEPRCRAPQVQT*CTWTPI Trigger: AATTGGGGTCCAAGTACAGCACGTTTGAACCTGAGG...TGCTCTACATCTTGGCTCAGGCTGACTGGAAGCGGCCTTCCCAGGCTGAAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184086.8 |
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| 3UTR-3UTR CCA 90 bp | GGCGATCACTGGGGACTGGGGCTGTCTCCCTCCGTGAGTGTCTTGAAGTCCATGGAGCAAAAAGATATCTaGAAACCCACAGAGCCAAGA | + |
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Preference number: 2 (lower is better) Translates to: GDHWGLGLSPSVSVLKSMEQKDI*KPTEPR Trigger: TCTTGGCTCTGTGGGTTTCCAGATATCTTTTTGCTC...CATGGACTTCAAGACACTCACGGAGGGAGACAGCCCCAGTCCCCAGTGATCGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000183493.8 ENSMUST00000184086.8 |
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| 3UTR-3UTR CCA 90 bp | GCTTCCCAAGCTGCTGGAACTCCTGGGTTGAATACACAAAGCAGCGGTCTGACTTGCTTCCCAAGCTGCTaGAACTCCTGGGTTGAATAC | + |
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Preference number: 2 (lower is better) Translates to: ASQAAGTPGLNTQSSGLTCFPSC*NSWVEY Trigger: GTATTCAACCCAGGAGTTCCAGCAGCTTGGGAAGCA...AGTCAGACCGCTGCTTTGTGTATTCAACCCAGGAGTTCCAGCAGCTTGGGAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019734.11 ENSMUST00000183493.8 |
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| 3UTR-3UTR GCA 90 bp | CTTTCTGCACGTGAACGGACAACAGCGGGTACAGGCAGACAGAGCCTACTCAGGAAGAGACTCAGTGTCTaGAGGGAAGAGCAAAAAGAT | + |
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Preference number: 2 (lower is better) Translates to: LSARERTTAGTGRQSLLRKRLSV*REEQKD Trigger: ATCTTTTTGCTCTTCCCTGCAGACACTGAGTCTCTT...CCTGAGTAGGCTCTGTCTGCCTGTACCCGCTGTTGTCCGTTCACGTGCAGAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000019734.11 ENSMUST00000183493.8 ENSMUST00000184086.8 |
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| 3UTR CAA 90 bp | GTACTCGTGAGTTTGTCTAAGGCCGAGTCGCCCAGATGTAAACACTaGACTGTACAAGTGTGCCAACCGACGACAGAACTCCTAAGATTC | + |
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Preference number: 2 (lower is better) Translates to: VLVSLSKAESPRCKH*TVQVCQPTTELLRF Trigger: GAATCTTAGGAGTTCTGTCGTCGGTTGGCACACTTGTACAGTCAAGTGTTTACATCTGGGCGACTCGGCCTTAGACAAACTCACGAGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019734.11 |
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| 3UTR-3UTR CCA 90 bp | GAAGGGGAGGAAGGGAGACTGAGAACAACTCCAAAGCCTGGAACCCCACTAAACGAGCAAAAAGATATCTaGAAACCCACAGAGCCAAGA | + |
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Preference number: 2 (lower is better) Translates to: EGEEGRLRTTPKPGTPLNEQKDI*KPTEPR Trigger: TCTTGGCTCTGTGGGTTTCCAGATATCTTTTTGCTC...GTTTAGTGGGGTTCCAGGCTTTGGAGTTGTTCTCAGTCTCCCTTCCTCCCCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000019734.11 ENSMUST00000183493.8 ENSMUST00000184086.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGGAGGAAGGGAGACTGAGAACAACTCCAAAGCCTGGAACCCCACTAAACTAGAGCAAAAAGATATCTaGAAACCCACAGAGCCAAGA | + |
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Preference number: 2 (lower is better) Translates to: RGGRETENNSKAWNPTKLEQKDI*KPTEPR Trigger: TCTTGGCTCTGTGGGTTTCCAGATATCTTTTTGCTC...TAGTTTAGTGGGGTTCCAGGCTTTGGAGTTGTTCTCAGTCTCCCTTCCTCCCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000019734.11 ENSMUST00000183493.8 ENSMUST00000184086.8 |
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| 3UTR-3UTR CCA 90 bp | AAATCTGACAGAGAAAACCAGCCTAGTGACTTAAAGAACTGCCAGGTTCAGAAAAAAACTCCGGAGGTGTaGCCTCCCACTCTCAGAGTC | + |
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Preference number: 2 (lower is better) Translates to: KSDRENQPSDLKNCQVQKKTPEV*PPTLRV Trigger: GACTCTGAGAGTGGGAGGCCACACCTCCGGAGTTTT...TTTCTGAACCTGGCAGTTCTTTAAGTCACTAGGCTGGTTTTCTCTGTCAGATTT 47% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000019734.11 |
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| 3UTR-3UTR GCA 90 bp | ACTCACACTCCTGGACCTAAGAGACTCAGTGTCTGCAGGGAAGAGCAAAAAGATAAGAGACTCAGTGTCTaGAGGGAAGAGCAAAAAGAT | + |
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Preference number: 2 (lower is better) Translates to: THTPGPKRLSVCREEQKDKRLSV*REEQKD Trigger: ATCTTTTTGCTCTTCCCTGCAGACACTGAGTCTCTT...ATCTTTTTGCTCTTCCCTGCAGACACTGAGTCTCTTAGGTCCAGGAGTGTGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000019734.11 ENSMUST00000183493.8 ENSMUST00000184086.8 |
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| 3UTR-3UTR CCA 90 bp | AAATCTGACAGAGAAAACCAGCCTAGTGACTTAAAGAACTGCCAGGTTCAGAAAACGCCAAGGCTCCTTTaGGAGCCAGAGTCAACCTTT | + |
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Preference number: 2 (lower is better) Translates to: KSDRENQPSDLKNCQVQKTPRLL*EPESTF Trigger: AAAGGTTGACTCTGGCTCCCAAAGGAGCCTTGGCGT...TTTCTGAACCTGGCAGTTCTTTAAGTCACTAGGCTGGTTTTCTCTGTCAGATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019734.11 |
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| 3UTR-3UTR GCA 90 bp | CTAAGAGACTCAGTGTCTGCAGGGAAGAGCAAAAAGATATCTGGAAACCCACAGAAGAGACTCAGTGTCTaGAGGGAAGAGCAAAAAGAT | + |
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Preference number: 2 (lower is better) Translates to: LRDSVSAGKSKKISGNPQKRLSV*REEQKD Trigger: ATCTTTTTGCTCTTCCCTGCAGACACTGAGTCTCTT...CTGTGGGTTTCCAGATATCTTTTTGCTCTTCCCTGCAGACACTGAGTCTCTTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000019734.11 ENSMUST00000183493.8 ENSMUST00000184086.8 |
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| 3UTR-3UTR GCA 90 bp | CATATACAGTTGGAACTGGAGGCAAACCTCACCATCCTAGCAAGTGGAGAGACGAGAATACAAGATCAGTaGTCTAATCCCAATATCTCT | + |
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Preference number: 2 (lower is better) Translates to: HIQLELEANLTILASGETRIQDQ*SNPNIS Trigger: AGAGATATTGGGATTAGAGCACTGATCTTGTATTCT...CGTCTCTCCACTTGCTAGGATGGTGAGGTTTGCCTCCAGTTCCAACTGTATATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019734.11 |
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| 3UTR-3UTR CCA 90 bp | CTGCTTGGGGGCTTTCTTTGGTCCTTAGTCATGTATCATACACTTTGGCAAAAAATATACAGTTGGAACTaGAGGCAAACCTCACCATCC | + |
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Preference number: 2 (lower is better) Translates to: LLGGFLWSLVMYHTLWQKIYSWN*RQTSPS Trigger: GGATGGTGAGGTTTGCCTCCAGTTCCAACTGTATAT...TTTTTGCCAAAGTGTATGATACATGACTAAGGACCAAAGAAAGCCCCCAAGCAG 43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000019734.11 |
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| 3UTR CAA 90 bp | CAGAAGAGACAGAAGAAACCACAGACATCTGCTTGGGGGCTTTCTTaGGTCCTTAGTCATGTATCATACACTTTGGCAAAAAGACTAGTT | + |
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Preference number: 2 (lower is better) Translates to: QKRQKKPQTSAWGLS*VLSHVSYTLAKRLV Trigger: AACTAGTCTTTTTGCCAAAGTGTATGATACATGACTAAGGACCAAAGAAAGCCCCCAAGCAGATGTCTGTGGTTTCTTCTGTCTCTTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019734.11 |
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| 3UTR TCA 72 bp | CTGAAGGGAGGTACTCTGCCAGGGCAGCCCTCACTGTaGGCAAGCAGCCTGCCCTCCTCCACCAGGGCAGGT | + |
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Preference number: 3 (lower is better) Translates to: LKGGTLPGQPSL*ASSLPSSTRAG Trigger: ACCTGCCCTGGTGGAGGAGGGCAGGCTGCTTGCTCACAGTGAGGGCTGCCCTGGCAGAGTACCTCCCTTCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019734.11 |
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| 3UTR TCA 72 bp | CTGGCCCGCAGAAGGAAGCTAGGGCTTAGCCCCTGCTaGAGGGAGGTACTCTGCCAGGGCAGCCCTCACTGT | + |
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Preference number: 3 (lower is better) Translates to: LARRRKLGLSPC*REVLCQGSPHC Trigger: ACAGTGAGGGCTGCCCTGGCAGAGTACCTCCCTTCAGCAGGGGCTAAGCCCTAGCTTCCTTCTGCGGGCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019734.11 |
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| 3UTR CCA 72 bp | GGTGAGGGAGCATCAGGGAGAGAGCTACACCACAGCTaGGGGAAGAGACCTCACCAGAAGCAGGGCCCACGC | + |
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Preference number: 3 (lower is better) Translates to: GEGASGRELHHS*GKRPHQKQGPR Trigger: GCGTGGGCCCTGCTTCTGGTGAGGTCTCTTCCCCCAGCTGTGGTGTAGCTCTCTCCCTGATGCTCCCTCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019734.11 |
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| 3UTR-3UTR CAA 90 bp | TCCAGCGATGATGGACCCAGGGCTGGGAGGACCATGATCCCTCAGGGCTGCTTCTGGAGGGCGGAGCTATaGTCTAGCTCCAATAGGGAT | + |
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Preference number: 3 (lower is better) Translates to: SSDDGPRAGRTMIPQGCFWRAEL*SSSNRD Trigger: ATCCCTATTGGAGCTAGACAATAGCTCCGCCCTCCA...GAAGCAGCCCTGAGGGATCATGGTCCTCCCAGCCCTGGGTCCATCATCGCTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019734.11 |
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| 3UTR CCA 72 bp | GTTGGAACTGGAGGCAAACCTCACCATCCTAGCAAGTaGAGAGACGGGAGGGAAGGTGAGGGAGCATCAGGG | + |
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Preference number: 3 (lower is better) Translates to: VGTGGKPHHPSK*RDGREGEGASG Trigger: CCCTGATGCTCCCTCACCTTCCCTCCCGTCTCTCCACTTGCTAGGATGGTGAGGTTTGCCTCCAGTTCCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019734.11 |
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| 3UTR-3UTR CAA 90 bp | GCCTACTCAGGGCTCACAGGATGTATCAAAAGCTGCAGAGAGGAAGGGGAGGAACCCTCCGTGAGTGTCTaGAAGTCCATGGAGAGGGCT | + |
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Preference number: 3 (lower is better) Translates to: AYSGLTGCIKSCREEGEEPSVSV*KSMERA Trigger: AGCCCTCTCCATGGACTTCAAGACACTCACGGAGGG...TTCCTCCCCTTCCTCTCTGCAGCTTTTGATACATCCTGTGAGCCCTGAGTAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000183493.8 ENSMUST00000184086.8 |
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| 3UTR CCA 72 bp | GCCAAGGACACATGCTTCCCAAGCTGCTGGAACTCCTaGGTTGAATACACAAAGCAGCGGTCTGACTTCTCC | + |
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Preference number: 3 (lower is better) Translates to: AKDTCFPSCWNS*VEYTKQRSDFS Trigger: GGAGAAGTCAGACCGCTGCTTTGTGTATTCAACCCAGGAGTTCCAGCAGCTTGGGAAGCATGTGTCCTTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019734.11 |
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| 3UTR GCA 72 bp | ACTTGCTCTACTGCCAAGGACACATGCTTCCCAAGCTaGTGGAACTCCTGGGTTGAATACACAAAGCAGCGG | + |
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Preference number: 3 (lower is better) Translates to: TCSTAKDTCFPS*WNSWVEYTKQR Trigger: CCGCTGCTTTGTGTATTCAACCCAGGAGTTCCAGCAGCTTGGGAAGCATGTGTCCTTGGCAGTAGAGCAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019734.11 |
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| 3UTR CCA 72 bp | TGCTCTACTGCCAAGGACACATGCTTCCCAAGCTGCTaGAACTCCTGGGTTGAATACACAAAGCAGCGGTCT | + |
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Preference number: 3 (lower is better) Translates to: CSTAKDTCFPSC*NSWVEYTKQRS Trigger: AGACCGCTGCTTTGTGTATTCAACCCAGGAGTTCCAGCAGCTTGGGAAGCATGTGTCCTTGGCAGTAGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019734.11 |
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| 3UTR-3UTR CAA 90 bp | AGACTCAGTGTCTGCAGGGAAGAGCAAAAAGATATCTGGAAACCCACAGAGCCACCCTCCGTGAGTGTCTaGAAGTCCATGGAGAGGGCT | + |
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Preference number: 3 (lower is better) Translates to: RLSVCREEQKDIWKPTEPPSVSV*KSMERA Trigger: AGCCCTCTCCATGGACTTCAAGACACTCACGGAGGG...TGGCTCTGTGGGTTTCCAGATATCTTTTTGCTCTTCCCTGCAGACACTGAGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000183493.8 ENSMUST00000184086.8 |
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| 3UTR TCA 72 bp | GTTTGTCTAAGGCCGAGTCGCCCAGATGTAAACACTTaGCTGTACAAGTGTGCCAACCGACGACAGAACTCC | + |
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Preference number: 3 (lower is better) Translates to: VCLRPSRPDVNT*LYKCANRRQNS Trigger: GGAGTTCTGTCGTCGGTTGGCACACTTGTACAGTCAAGTGTTTACATCTGGGCGACTCGGCCTTAGACAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019734.11 |
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| 3UTR GCA 72 bp | CACACTCACACTCCTGGACCTAAGAGACTCAGTGTCTaGAGGGAAGAGCAAAAAGATATCTGGAAACCCACA | + |
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Preference number: 3 (lower is better) Translates to: HTHTPGPKRLSV*REEQKDIWKPT Trigger: TGTGGGTTTCCAGATATCTTTTTGCTCTTCCCTGCAGACACTGAGTCTCTTAGGTCCAGGAGTGTGAGTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000019734.11 ENSMUST00000183493.8 ENSMUST00000184086.8 |
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| 3UTR GCA 72 bp | ACACATAATATCACTTGCTCTACTGCCAAGGACACATaGTTCCCAAGCTGCTGGAACTCCTGGGTTGAATAC | + |
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Preference number: 3 (lower is better) Translates to: THNITCSTAKDT*FPSCWNSWVEY Trigger: GTATTCAACCCAGGAGTTCCAGCAGCTTGGGAAGCATGTGTCCTTGGCAGTAGAGCAAGTGATATTATGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019734.11 |
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| 3UTR CCA 72 bp | AGACAGAAGAGACAGAAGAAACCACAGACATCTGCTTaGGGGCTTTCTTTGGTCCTTAGTCATGTATCATAC | + |
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Preference number: 3 (lower is better) Translates to: RQKRQKKPQTSA*GLSLVLSHVSY Trigger: GTATGATACATGACTAAGGACCAAAGAAAGCCCCCAAGCAGATGTCTGTGGTTTCTTCTGTCTCTTCTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019734.11 |
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| 3UTR GCA 72 bp | TCTGACAGAGAAAACCAGCCTAGTGACTTAAAGAACTaGCAGGTTCAGAAACCATTCATTTCCTCACTAAGT | + |
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Preference number: 3 (lower is better) Translates to: SDRENQPSDLKN*QVQKPFISSLS Trigger: ACTTAGTGAGGAAATGAATGGTTTCTGAACCTGGCAGTTCTTTAAGTCACTAGGCTGGTTTTCTCTGTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019734.11 |
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| 3UTR CCA 72 bp | AGAAGAAACCACAGACATCTGCTTGGGGGCTTTCTTTaGTCCTTAGTCATGTATCATACACTTTGGCAAAAA | + |
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Preference number: 3 (lower is better) Translates to: RRNHRHLLGGFL*SLVMYHTLWQK Trigger: TTTTTGCCAAAGTGTATGATACATGACTAAGGACCAAAGAAAGCCCCCAAGCAGATGTCTGTGGTTTCTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019734.11 |
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| 3UTR CAA 72 bp | CACTGGGGACTGGGGCTGTCTCCCTCCGTGAGTGTCTaGAAGTCCATGGAGAGGGCTTGCTCTTCAGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: HWGLGLSPSVSV*KSMERACSSAW Trigger: CCAGGCTGAAGAGCAAGCCCTCTCCATGGACTTCAAGACACTCACGGAGGGAGACAGCCCCAGTCCCCAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000183493.8 ENSMUST00000184086.8 |
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| CDS-3UTR TCA 90 bp | GCTCTTCAGCCTGGGAAGGCCGCTTCCAGTCAGCCTGAGCCAAGATGTAGAGCATCACAGCCACTACAGTaGGGCCCAGCAGCTGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: ALQPGKAASSQPEPRCRASQPLQ*GPAAGR Trigger: TCTCCCAGCTGCTGGGCCTCACTGTAGTGGCTGTGA...TGCTCTACATCTTGGCTCAGGCTGACTGGAAGCGGCCTTCCCAGGCTGAAGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000183493.8 ENSMUST00000184086.8 |
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| CDS-3UTR CCA 90 bp | GCACGTGAACGGACAACAGCGGGTACAGGCAGACAGAGCCTACTCAGGGCTCACGCTTGCTCTTCAGCCTaGGAAGGCCGCTTCCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: ARERTTAGTGRQSLLRAHACSSA*EGRFQS Trigger: TGACTGGAAGCGGCCTTCCCAGGCTGAAGAGCAAGC...GTGAGCCCTGAGTAGGCTCTGTCTGCCTGTACCCGCTGTTGTCCGTTCACGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019734.11 |
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| 3UTR CAA 72 bp | TCCCTCCGTGAGTGTCTTGAAGTCCATGGAGAGGGCTaGCTCTTCAGCCTGGGAAGGCCGCTTCCAGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLRECLEVHGEG*LFSLGRPLPVS Trigger: GCTGACTGGAAGCGGCCTTCCCAGGCTGAAGAGCAAGCCCTCTCCATGGACTTCAAGACACTCACGGAGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000183493.8 ENSMUST00000184086.8 |
||
| CDS-3UTR GCA 90 bp | ACTGGGGCTGTCTCCCTCCGTGAGTGTCTTGAAGTCCATGGAGAGGGCTTGCTCAGCTTTCCCAGGCAATaGCACCTCGGTACAGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: TGAVSLRECLEVHGEGLLSFPRQ*HLGTDP Trigger: TGGGTCTGTACCGAGGTGGCATTGCCTGGGAAAGCT...GAGCAAGCCCTCTCCATGGACTTCAAGACACTCACGGAGGGAGACAGCCCCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000183493.8 ENSMUST00000184086.8 |
||
| CDS-3UTR GCA 90 bp | GCTCTTCAGCCTGGGAAGGCCGCTTCCAGTCAGCCTGAGCCAAGATGTAGAGCAAGCTTTCCCAGGCAATaGCACCTCGGTACAGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: ALQPGKAASSQPEPRCRASFPRQ*HLGTDP Trigger: TGGGTCTGTACCGAGGTGGCATTGCCTGGGAAAGCT...TGCTCTACATCTTGGCTCAGGCTGACTGGAAGCGGCCTTCCCAGGCTGAAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000183493.8 ENSMUST00000184086.8 |
||
| CDS-3UTR GCA 90 bp | TTTCTGCACGTGAACGGACAACAGCGGGTACAGGCAGACAGAGCCTACTCAGGGGGCCCAGTAGGGCTGTaGCCACAGAGAAGAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FLHVNGQQRVQADRAYSGGPVGL*PQRRGR Trigger: TCTTCCTCTTCTCTGTGGGCACAGCCCTACTGGGCC...CCCTGAGTAGGCTCTGTCTGCCTGTACCCGCTGTTGTCCGTTCACGTGCAGAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019734.11 ENSMUST00000184086.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGCGATGATGGACCCAGGGCTGGGAGGACCATGATCCCTCAGGGCTGCTTCAGCAGAGCATCTCCTTaGAGGAAGATCATGCCTATG | + |
|
Preference number: 4 (lower is better) Translates to: SSDDGPRAGRTMIPQGCFSRASP*RKIMPM Trigger: CATAGGCATGATCTTCCTTCAAGGAGATGCTCTGCT...GAAGCAGCCCTGAGGGATCATGGTCCTCCCAGCCCTGGGTCCATCATCGCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019734.11 |
||
| CDS-3UTR TCA 90 bp | GCACAACCACCCCAAAACAGACCAGCAGCAAGCCTAGCACGTTGGCCAGCACCCGTTTGGCTTCTCTTCTaGAGACACGGTACACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AQPPQNRPAASLARWPAPVWLLF*RHGTPA Trigger: TGCTGGTGTACCGTGTCTTCAGAAGAGAAGCCAAAC...GGGTGCTGGCCAACGTGCTAGGCTTGCTGCTGGTCTGTTTTGGGGTGGTTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184086.8 |
||
| CDS-3UTR TCA 90 bp | CAGCCCCACACTCACACTCCTGGACCTAAGAGACTCAGTGTCTGCAGGGAAGAGGCTCCGCAGAGAGAATaGAGCTCCAGGGAACAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QPHTHTPGPKRLSVCREEAPQRE*SSREQE Trigger: TTCCTGTTCCCTGGAGCTTCATTCTCTCTGCGGAGC...CTCTTCCCTGCAGACACTGAGTCTCTTAGGTCCAGGAGTGTGAGTGTGGGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019734.11 ENSMUST00000184086.8 |
||
| CDS-3UTR TCA 90 bp | GCAGACAGAGCCTACTCAGGGCTCACAGGATGTATCAAAAGCTGCAGAGAGGAAGAGAGAGGGCTCTGCTaGGCCATGAGCTGGCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ADRAYSGLTGCIKSCREEERGLC*AMSWLG Trigger: TCCCAGCCAGCTCATGGCTCAGCAGAGCCCTCTCTC...TTCCTCTCTGCAGCTTTTGATACATCCTGTGAGCCCTGAGTAGGCTCTGTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184086.8 |
||
| CDS-3UTR TCA 90 bp | GCACGTGAACGGACAACAGCGGGTACAGGCAGACAGAGCCTACTCAGGGCTCACGGAACAGGAAGAAGCTaGAACCCACGAGCCACTAAA | + |
|
Preference number: 4 (lower is better) Translates to: ARERTTAGTGRQSLLRAHGTGRS*NPRATK Trigger: TTTAGTGGCTCGTGGGTTTCAGCTTCTTCCTGTTCC...GTGAGCCCTGAGTAGGCTCTGTCTGCCTGTACCCGCTGTTGTCCGTTCACGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184086.8 |
||
| CDS-3UTR GCA 90 bp | GATCACTGGGGACTGGGGCTGTCTCCCTCCGTGAGTGTCTTGAAGTCCATGGAGACCATGCAGAGCGGGTaGACATTAAACTGCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DHWGLGLSPSVSVLKSMETMQSG*TLNCRE Trigger: CTCCCTGCAGTTTAATGTGCACCCGCTCTGCATGGT...CTCCATGGACTTCAAGACACTCACGGAGGGAGACAGCCCCAGTCCCCAGTGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000183493.8 ENSMUST00000184086.8 |
||
| CDS-3UTR GCA 90 bp | GCTGTCTCCCTCCGTGAGTGTCTTGAAGTCCATGGAGAGGGCTTGCTCTTCAGCACGTGCAGCAGCCCATaGAAGATCTTGGTCGTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: AVSLRECLEVHGEGLLFSTCSSP*KILVVR Trigger: ACGCACGACCAAGATCTTGCATGGGCTGCTGCACGT...GCTGAAGAGCAAGCCCTCTCCATGGACTTCAAGACACTCACGGAGGGAGACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000183493.8 ENSMUST00000184086.8 |
||
| CDS-3UTR GCA 90 bp | ACTGGGGCTGTCTCCCTCCGTGAGTGTCTTGAAGTCCATGGAGAGGGCTTGCTCCCTCAGGTTCAAACGTaGTGTACTTGGACCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: TGAVSLRECLEVHGEGLLPQVQT*CTWTHQ Trigger: CTGGTGGGTCCAAGTACAGCACGTTTGAACCTGAGG...GAGCAAGCCCTCTCCATGGACTTCAAGACACTCACGGAGGGAGACAGCCCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183493.8 |
||
| CDS-3UTR GCA 90 bp | CTTCAGCCTGGGAAGGCCGCTTCCAGTCAGCCTGAGCCAAGATGTAGAGCACAAGGGTGCACATTAAACTaGAGGGAGCTTTCCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LQPGKAASSQPEPRCRAQGCTLN*RELSQA Trigger: TGCCTGGGAAAGCTCCCTGCAGTTTAATGTGCACCC...TTGTGCTCTACATCTTGGCTCAGGCTGACTGGAAGCGGCCTTCCCAGGCTGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000183493.8 ENSMUST00000184086.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCCCACACTCACACTCCTGGACCTAAGAGACTCAGTGTCTGCAGGGAAGAGACCATGCAGAGCGGGTaGACATTAAACTGCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QPHTHTPGPKRLSVCREETMQSG*TLNCRE Trigger: CTCCCTGCAGTTTAATGTGCACCCGCTCTGCATGGT...CTCTTCCCTGCAGACACTGAGTCTCTTAGGTCCAGGAGTGTGAGTGTGGGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019734.11 ENSMUST00000183493.8 ENSMUST00000184086.8 |
||
| CDS-3UTR TCA 90 bp | GCCTACTCAGGGCTCACAGGATGTATCAAAAGCTGCAGAGAGGAAGGGGAGGAAGGAACAGGAAGAAGCTaGAACCCACGAGCCACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: AYSGLTGCIKSCREEGEEGTGRS*NPRATA Trigger: TGCAGTGGCTCGTGGGTTTCAGCTTCTTCCTGTTCC...TTCCTCCCCTTCCTCTCTGCAGCTTTTGATACATCCTGTGAGCCCTGAGTAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019734.11 |
||
| CDS-3UTR CCA 90 bp | CCCAGGCCCAGCAGCCATCTGCTGCATGGAGGGCGGAGCTATTGTCTAGCTCCACAGAGAAGAGGAAGATaGTGGCACCAAAGAAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: PRPSSHLLHGGRSYCLAPQRRGR*WHQRKC Trigger: ACATTTTCTTTGGTGCCACCATCTTCCTCTTCTCTG...TGGAGCTAGACAATAGCTCCGCCCTCCATGCAGCAGATGGCTGCTGGGCCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019734.11 |
||
| CDS-3UTR TCA 90 bp | GGGCTGTCTCCCTCCGTGAGTGTCTTGAAGTCCATGGAGAGGGCTTGCTCTTCAAGCAGAGCATCTCCTTaGAGGAAGATCATGCCTATG | + |
|
Preference number: 4 (lower is better) Translates to: GLSPSVSVLKSMERACSSSRASP*RKIMPM Trigger: CATAGGCATGATCTTCCTTCAAGGAGATGCTCTGCT...TGAAGAGCAAGCCCTCTCCATGGACTTCAAGACACTCACGGAGGGAGACAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000183493.8 ENSMUST00000184086.8 |
||
| CDS-3UTR GCA 90 bp | GGGTTGAATACACAAAGCAGCGGTCTGACTTCTCCATGCCAGTCCCTCAGGCCCCCTCAGGTTCAAACGTaGTGTACTTGGACCCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: GLNTQSSGLTSPCQSLRPPQVQT*CTWTPI Trigger: AATTGGGGTCCAAGTACAGCACGTTTGAACCTGAGG...GGGCCTGAGGGACTGGCATGGAGAAGTCAGACCGCTGCTTTGTGTATTCAACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019734.11 |
||
| 3UTR CAA 72 bp | AGGACACATGCTTCCCAAGCTGCTGGAACTCCTGGGTaGAATACACAAAGCAGCGGTCTGACTTCTCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: RTHASQAAGTPG*NTQSSGLTSPC Trigger: GCATGGAGAAGTCAGACCGCTGCTTTGTGTATTCAACCCAGGAGTTCCAGCAGCTTGGGAAGCATGTGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019734.11 |
||
| CDS-3UTR TCA 90 bp | AAGAGACTCAGTGTCTGCAGGGAAGAGCAAAAAGATATCTGGAAACCCACAGAGTCACAGCCACTACAGTaGGGCCCAGCAGCTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KRLSVCREEQKDIWKPTESQPLQ*GPAAGR Trigger: TCTCCCAGCTGCTGGGCCTCACTGTAGTGGCTGTGA...CTCTGTGGGTTTCCAGATATCTTTTTGCTCTTCCCTGCAGACACTGAGTCTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000019734.11 ENSMUST00000183493.8 ENSMUST00000184086.8 |
||
| CDS-3UTR TCA 90 bp | GAACAGAAAGGCCTAAAGACTGTAGCCAACCCACACGCCAAGGCTCCTTTGGGAGTTTGGCTTCTCTTCTaGAGACACGGTACACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EQKGLKTVANPHAKAPLGVWLLF*RHGTPA Trigger: TGCTGGTGTACCGTGTCTTCAGAAGAGAAGCCAAAC...TCCCAAAGGAGCCTTGGCGTGTGGGTTGGCTACAGTCTTTAGGCCTTTCTGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019734.11 |
||
| CDS-3UTR TCA 90 bp | CAGTGTCTGCAGGGAAGAGCAAAAAGATATCTGGAAACCCACAGAGCCAAGAGGGCTCCGCAGAGAGAATaGAGCTCCAGGGAACAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QCLQGRAKRYLETHRAKRAPQRE*SSREQE Trigger: TTCCTGTTCCCTGGAGCTTCATTCTCTCTGCGGAGC...CCTCTTGGCTCTGTGGGTTTCCAGATATCTTTTTGCTCTTCCCTGCAGACACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019734.11 ENSMUST00000184086.8 |
||
| CDS-3UTR GCA 90 bp | CAGTGTCTGCAGGGAAGAGCAAAAAGATATCTGGAAACCCACAGAGCCAAGAGGAGCTTTCCCAGGCAATaGCACCTCGGTACAGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: QCLQGRAKRYLETHRAKRSFPRQ*HLGTDP Trigger: TGGGTCTGTACCGAGGTGGCATTGCCTGGGAAAGCT...CCTCTTGGCTCTGTGGGTTTCCAGATATCTTTTTGCTCTTCCCTGCAGACACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000019734.11 ENSMUST00000183493.8 ENSMUST00000184086.8 |
||
| CDS-3UTR GCA 90 bp | TTCCCAAGCTGCTGGAACTCCTGGGTTGAATACACAAAGCAGCGGTCTGACTTCGGGTGCACATTAAACTaGAGGGAGCTTTCCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FPSCWNSWVEYTKQRSDFGCTLN*RELSQA Trigger: TGCCTGGGAAAGCTCCCTGCAGTTTAATGTGCACCC...GAAGTCAGACCGCTGCTTTGTGTATTCAACCCAGGAGTTCCAGCAGCTTGGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019734.11 ENSMUST00000183493.8 |
||
| CDS-3UTR GCA 90 bp | CAGCAGCCATCTGCTGCATGGAGGGCGGAGCTATTGTCTAGCTCCAATAGGGATCAAGCTGTACAGGTCTaGATAGCCCTTCTTCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QQPSAAWRAELLSSSNRDQAVQV*IALLLV Trigger: CACAAGAAGAAGGGCTATGCAGACCTGTACAGCTTG...ATCCCTATTGGAGCTAGACAATAGCTCCGCCCTCCATGCAGCAGATGGCTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019734.11 |
||
| CDS-3UTR GCA 90 bp | GACTCAGTGTCTGCAGGGAAGAGCAAAAAGATATCTGGAAACCCACAGAGCCAAGGCCCAGTAGGGCTGTaGCCACAGAGAAGAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: DSVSAGKSKKISGNPQSQGPVGL*PQRRGR Trigger: TCTTCCTCTTCTCTGTGGGCACAGCCCTACTGGGCC...TTGGCTCTGTGGGTTTCCAGATATCTTTTTGCTCTTCCCTGCAGACACTGAGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019734.11 ENSMUST00000184086.8 |
||
| CDS-3UTR GCA 90 bp | AGAGACTCAGTGTCTGCAGGGAAGAGCAAAAAGATATCTGGAAACCCACAGAGCCACATAGTACGGCAGTaGAGCAGGGACAGACGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RDSVSAGKSKKISGNPQSHIVRQ*SRDRRR Trigger: TCTGCGTCTGTCCCTGCTGCACTGCCGTACTATGTG...GCTCTGTGGGTTTCCAGATATCTTTTTGCTCTTCCCTGCAGACACTGAGTCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019734.11 ENSMUST00000184086.8 |
||
| CDS-3UTR GCA 90 bp | ACTCACACTCCTGGACCTAAGAGACTCAGTGTCTGCAGGGAAGAGCAAAAAGATACGTGCAGCAGCCCATaGAAGATCTTGGTCGTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: THTPGPKRLSVCREEQKDTCSSP*KILVVR Trigger: ACGCACGACCAAGATCTTGCATGGGCTGCTGCACGT...ATCTTTTTGCTCTTCCCTGCAGACACTGAGTCTCTTAGGTCCAGGAGTGTGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000019734.11 ENSMUST00000183493.8 ENSMUST00000184086.8 |
||
| CDS-3UTR TCA 90 bp | CTGCTTGGGGGCTTTCTTTGGTCCTTAGTCATGTATCATACACTTTGGCAAAAATCACAGCCACTACAGTaGGGCCCAGCAGCTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLGGFLWSLVMYHTLWQKSQPLQ*GPAAGR Trigger: TCTCCCAGCTGCTGGGCCTCACTGTAGTGGCTGTGA...TTTTTGCCAAAGTGTATGATACATGACTAAGGACCAAAGAAAGCCCCCAAGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019734.11 |
||
| CDS-3UTR GCA 90 bp | CTAAGAGACTCAGTGTCTGCAGGGAAGAGCAAAAAGATATCTGGAAACCCACAGCACATAGTACGGCAGTaGAGCAGGGACAGACGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LRDSVSAGKSKKISGNPQHIVRQ*SRDRRR Trigger: TCTGCGTCTGTCCCTGCTGCACTGCCGTACTATGTG...CTGTGGGTTTCCAGATATCTTTTTGCTCTTCCCTGCAGACACTGAGTCTCTTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019734.11 ENSMUST00000184086.8 |
||
| CDS-3UTR GCA 90 bp | ACTCACACTCCTGGACCTAAGAGACTCAGTGTCTGCAGGGAAGAGCAAAAAGATGGGTGCACATTAAACTaGAGGGAGCTTTCCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: THTPGPKRLSVCREEQKDGCTLN*RELSQA Trigger: TGCCTGGGAAAGCTCCCTGCAGTTTAATGTGCACCC...ATCTTTTTGCTCTTCCCTGCAGACACTGAGTCTCTTAGGTCCAGGAGTGTGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000019734.11 ENSMUST00000183493.8 ENSMUST00000184086.8 |
||
| CDS-3UTR GCA 90 bp | ACTCACACTCCTGGACCTAAGAGACTCAGTGTCTGCAGGGAAGAGCAAAAAGATACCATGCAGAGCGGGTaGACATTAAACTGCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: THTPGPKRLSVCREEQKDTMQSG*TLNCRE Trigger: CTCCCTGCAGTTTAATGTGCACCCGCTCTGCATGGT...ATCTTTTTGCTCTTCCCTGCAGACACTGAGTCTCTTAGGTCCAGGAGTGTGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000019734.11 ENSMUST00000183493.8 ENSMUST00000184086.8 |
||
| 3UTR CAA 72 bp | AGTTTGTCTAAGGCCGAGTCGCCCAGATGTAAACACTaGACTGTACAAGTGTGCCAACCGACGACAGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: SLSKAESPRCKH*TVQVCQPTTEL Trigger: GAGTTCTGTCGTCGGTTGGCACACTTGTACAGTCAAGTGTTTACATCTGGGCGACTCGGCCTTAGACAAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019734.11 |
||
| CDS-3UTR TCA 90 bp | GACTCAGTGTCTGCAGGGAAGAGCAAAAAGATATCTGGAAACCCACAGAGCCAAGTTTGGCTTCTCTTCTaGAGACACGGTACACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DSVSAGKSKKISGNPQSQVWLLF*RHGTPA Trigger: TGCTGGTGTACCGTGTCTTCAGAAGAGAAGCCAAAC...TTGGCTCTGTGGGTTTCCAGATATCTTTTTGCTCTTCCCTGCAGACACTGAGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000019734.11 ENSMUST00000183493.8 ENSMUST00000184086.8 |
||
| CDS-3UTR GCA 90 bp | AGAGACTCAGTGTCTGCAGGGAAGAGCAAAAAGATATCTGGAAACCCACAGAGCCAAGCTGTACAGGTCTaGATAGCCCTTCTTCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RDSVSAGKSKKISGNPQSQAVQV*IALLLV Trigger: CACAAGAAGAAGGGCTATGCAGACCTGTACAGCTTG...GCTCTGTGGGTTTCCAGATATCTTTTTGCTCTTCCCTGCAGACACTGAGTCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019734.11 ENSMUST00000184086.8 |
||
| CDS-3UTR CCA 90 bp | GACTCAGTGTCTGCAGGGAAGAGCAAAAAGATATCTGGAAACCCACAGAGCCAACAGAGAAGAGGAAGATaGTGGCACCAAAGAAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: DSVSAGKSKKISGNPQSQQRRGR*WHQRKC Trigger: ACATTTTCTTTGGTGCCACCATCTTCCTCTTCTCTG...TTGGCTCTGTGGGTTTCCAGATATCTTTTTGCTCTTCCCTGCAGACACTGAGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019734.11 ENSMUST00000184086.8 |
||
| CDS-3UTR GCA 90 bp | GTCCTTAGTCATGTATCATACACTTTGGCAAAAAGACTAGTTTACAGACTCTCAACGTGCAGCAGCCCATaGAAGATCTTGGTCGTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: VLSHVSYTLAKRLVYRLSTCSSP*KILVVR Trigger: ACGCACGACCAAGATCTTGCATGGGCTGCTGCACGT...TGAGAGTCTGTAAACTAGTCTTTTTGCCAAAGTGTATGATACATGACTAAGGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019734.11 |
||
| 3UTR CAA 72 bp | CAGAAGAAACCACAGACATCTGCTTGGGGGCTTTCTTaGGTCCTTAGTCATGTATCATACACTTTGGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QKKPQTSAWGLS*VLSHVSYTLAK Trigger: TTTTGCCAAAGTGTATGATACATGACTAAGGACCAAAGAAAGCCCCCAAGCAGATGTCTGTGGTTTCTTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019734.11 |
||
| CDS TCA 90 bp | CACCTCGGTACAGACCCAGCCACGCACCAGTCACAGCCACTACAGTaGGGCCCAGCAGCTGGGAGAAGGCCACATAGTACGGCAGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HLGTDPATHQSQPLQ*GPAAGRRPHSTAVQ Trigger: CTGCACTGCCGTACTATGTGGCCTTCTCCCAGCTGCTGGGCCTCACTGTAGTGGCTGTGACTGGTGCGTGGCTGGGTCTGTACCGAGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019734.11 ENSMUST00000143251.8 ENSMUST00000150563.3 ENSMUST00000184086.8 ENSMUST00000184269.3 |
||
| CDS TCA 90 bp | CACCTCGGTACAGACCCAGCCACGCACCAGTCACAGCCACTACAGTaGGGCCCAGCAGCTGGGAGAAGGCCACATAGTACGGCAGTGCAN | + |
|
Preference number: 5 (lower is better) Translates to: HLGTDPATHQSQPLQ*GPAAGRRPHSTAVX Trigger: NTGCACTGCCGTACTATGTGGCCTTCTCCCAGCTGCTGGGCCTCACTGTAGTGGCTGTGACTGGTGCGTGGCTGGGTCTGTACCGAGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183493.8 |
||
| CDS GCA 90 bp | CTGAGACCCCAGCCTCTTGGGTTCTGCTCTAGATTAGTCCCACGATaGTCTCGAGGGAAATGTCTCCTGCCCTGCTCCTTGTCCCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LRPQPLGFCSRLVPR*SRGKCLLPCSLSRR Trigger: GCGGCGGGACAAGGAGCAGGGCAGGAGACATTTCCCTCGAGAGCATCGTGGGACTAATCTAGAGCAGAACCCAAGAGGCTGGGGTCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184269.3 |
||
| CDS TCA 90 bp | AGCGGCTCCGCAGAGAGAATGAAGCTCCAGGGAACAGGAAGAAGCTaGAACCCACGAGCCACTAAAGGGAGAGAGGGCTCTGCTGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SGSAERMKLQGTGRS*NPRATKGREGSAEP Trigger: TGGCTCAGCAGAGCCCTCTCTCCCTTTAGTGGCTCGTGGGTTTCAGCTTCTTCCTGTTCCCTGGAGCTTCATTCTCTCTGCGGAGCCGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184086.8 |
||
| CDS GCA 90 bp | GGACCCACCAGGGCGATGATGAAGGCGAAGACGTGCAGCAGCCCATaGAAGATCTTGGTCGTGCGTTTGGCTTCTCTTCTGAAGACACGG | + |
|
Preference number: 5 (lower is better) Translates to: GPTRAMMKAKTCSSP*KILVVRLASLLKTR Trigger: CCGTGTCTTCAGAAGAGAAGCCAAACGCACGACCAAGATCTTGCATGGGCTGCTGCACGTCTTCGCCTTCATCATCGCCCTGGTGGGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183493.8 |
||
| CDS-3UTR CAA 90 bp | GAGCCTACTCAGGGCTCACAGGATGTATCAAAAGCTGCAGAGAGGAAGGGGAGGGTCCATGGAGAGGGCTaGCTCTTCAGCCTGGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: EPTQGSQDVSKAAERKGRVHGEG*LFSLGR Trigger: CCTTCCCAGGCTGAAGAGCAAGCCCTCTCCATGGAC...CCTCCCCTTCCTCTCTGCAGCTTTTGATACATCCTGTGAGCCCTGAGTAGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019734.11 |
||
| CDS GCA 90 bp | AACCCCACCAGGGCGATGATGAAGGCGAAGACGTGCAGCAGCCCATaGAAGATCTTGGTCGTGCGTTTGGCTTCTCTTCTGAAGACACGG | + |
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Preference number: 5 (lower is better) Translates to: NPTRAMMKAKTCSSP*KILVVRLASLLKTR Trigger: CCGTGTCTTCAGAAGAGAAGCCAAACGCACGACCAAGATCTTGCATGGGCTGCTGCACGTCTTCGCCTTCATCATCGCCCTGGTGGGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019734.11 ENSMUST00000143251.8 ENSMUST00000184086.8 ENSMUST00000184269.3 |
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| CDS GCA 90 bp | AACACAGCCACCAACCCCACCAGGGCGATGATGAAGGCGAAGACGTaGAGCAGCCCATGCAAGATCTTGGTCGTGCGTTTGGCTTCTCTT | + |
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Preference number: 5 (lower is better) Translates to: NTATNPTRAMMKAKT*SSPCKILVVRLASL Trigger: AAGAGAAGCCAAACGCACGACCAAGATCTTGCATGGGCTGCTGCACGTCTTCGCCTTCATCATCGCCCTGGTGGGGTTGGTGGCTGTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019734.11 ENSMUST00000143251.8 ENSMUST00000184086.8 ENSMUST00000184269.3 |
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| CDS GCA 90 bp | CGTGCTGTACTTGGACCCACCAGGGCGATGATGAAGGCGAAGACGTaGAGCAGCCCATGCAAGATCTTGGTCGTGCGTTTGGCTTCTCTT | + |
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Preference number: 5 (lower is better) Translates to: RAVLGPTRAMMKAKT*SSPCKILVVRLASL Trigger: AAGAGAAGCCAAACGCACGACCAAGATCTTGCATGGGCTGCTGCACGTCTTCGCCTTCATCATCGCCCTGGTGGGTCCAAGTACAGCACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183493.8 |
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| CDS-3UTR CAA 90 bp | GTTGAATACACAAAGCAGCGGTCTGACTTCTCCATGCCAGTCCCTCAGGCCCAGCCCTCCGTGAGTGTCTaGAAGTCCATGGAGAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: VEYTKQRSDFSMPVPQAQPSVSV*KSMERA Trigger: AGCCCTCTCCATGGACTTCAAGACACTCACGGAGGG...CTGGGCCTGAGGGACTGGCATGGAGAAGTCAGACCGCTGCTTTGTGTATTCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019734.11 |
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| CDS GCA 90 bp | AGGAAGATCATGCCTATGACCATGCAGAGCGGGTGCACATTAAACTaGAGGGAGCTTTCCCAGGCAATGCCACCTCGGTACAGACCCAGC | + |
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Preference number: 5 (lower is better) Translates to: RKIMPMTMQSGCTLN*RELSQAMPPRYRPS Trigger: GCTGGGTCTGTACCGAGGTGGCATTGCCTGGGAAAGCTCCCTGCAGTTTAATGTGCACCCGCTCTGCATGGTCATAGGCATGATCTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019734.11 ENSMUST00000143251.8 ENSMUST00000150563.3 ENSMUST00000183493.8 ENSMUST00000184086.8 ENSMUST00000184269.3 |
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| CDS GCA 90 bp | CTAAAGGGAGAGAGGGCTCTGCTGAGCCATGAGCTGGCTGGGACCTaGACAAAGTACAGAACAAAGACTAAGATCCCACACCAGCTGTGC | + |
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Preference number: 5 (lower is better) Translates to: LKGERALLSHELAGT*TKYRTKTKIPHQLC Trigger: GCACAGCTGGTGTGGGATCTTAGTCTTTGTTCTGTACTTTGTGCAGGTCCCAGCCAGCTCATGGCTCAGCAGAGCCCTCTCTCCCTTTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184086.8 |
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| CDS-3UTR CAA 90 bp | GCTCTTCAGCCTGGGAAGGCCGCTTCCAGTCAGCCTGAGCCAAGATGTAGAGCACAGCAGAGCATCTCCTaGAAGGAAGATCATGCCTAT | + |
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Preference number: 5 (lower is better) Translates to: ALQPGKAASSQPEPRCRAQQSIS*KEDHAY Trigger: ATAGGCATGATCTTCCTTCAAGGAGATGCTCTGCTG...TGCTCTACATCTTGGCTCAGGCTGACTGGAAGCGGCCTTCCCAGGCTGAAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000183493.8 ENSMUST00000184086.8 |
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| CDS TCA 90 bp | GCAGCAGCCCATGCAAGATCTTGGTCGTGCGTTTGGCTTCTCTTCTaGAGACACGGTACACCAGCAGAGCATCTCCTTGAAGGAAGATCA | + |
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Preference number: 5 (lower is better) Translates to: AAAHARSWSCVWLLF*RHGTPAEHLLEGRS Trigger: TGATCTTCCTTCAAGGAGATGCTCTGCTGGTGTACCGTGTCTTCAGAAGAGAAGCCAAACGCACGACCAAGATCTTGCATGGGCTGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019734.11 ENSMUST00000143251.8 ENSMUST00000150563.3 ENSMUST00000183493.8 ENSMUST00000184086.8 ENSMUST00000184269.3 |
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| CDS TCA 90 bp | AGCGGCTCCGCAGAGAGAATGAAGCTCCAGGGAACAGGAAGAAGCTaGAACCCACGAGCCACTGCACAAAGTACAGAACAAAGACTAAGA | + |
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Preference number: 5 (lower is better) Translates to: SGSAERMKLQGTGRS*NPRATAQSTEQRLR Trigger: TCTTAGTCTTTGTTCTGTACTTTGTGCAGTGGCTCGTGGGTTTCAGCTTCTTCCTGTTCCCTGGAGCTTCATTCTCTCTGCGGAGCCGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019734.11 ENSMUST00000143251.8 |
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| CDS-3UTR CAA 90 bp | ACACTCACACTCCTGGACCTAAGAGACTCAGTGTCTGCAGGGAAGAGCAAAAAGCAGCAGAGCATCTCCTaGAAGGAAGATCATGCCTAT | + |
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Preference number: 5 (lower is better) Translates to: TLTLLDLRDSVSAGKSKKQQSIS*KEDHAY Trigger: ATAGGCATGATCTTCCTTCAAGGAGATGCTCTGCTG...CTTTTTGCTCTTCCCTGCAGACACTGAGTCTCTTAGGTCCAGGAGTGTGAGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000019734.11 ENSMUST00000183493.8 ENSMUST00000184086.8 |
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| CDS-3UTR CAA 90 bp | AGACTCAGTGTCTGCAGGGAAGAGCAAAAAGATATCTGGAAACCCACAGAGCCACAGCAGAGCATCTCCTaGAAGGAAGATCATGCCTAT | + |
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Preference number: 5 (lower is better) Translates to: RLSVCREEQKDIWKPTEPQQSIS*KEDHAY Trigger: ATAGGCATGATCTTCCTTCAAGGAGATGCTCTGCTG...TGGCTCTGTGGGTTTCCAGATATCTTTTTGCTCTTCCCTGCAGACACTGAGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000019734.11 ENSMUST00000183493.8 ENSMUST00000184086.8 |
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| CDS GCA 72 bp | GTCCCACGATGCTCTCGAGGGAAATGTCTCCTGCCCTaGTCCTTGTCCCGCCGCCGCCAGGCCTGCGCGCGT | + |
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Preference number: 6 (lower is better) Translates to: VPRCSRGKCLLP*SLSRRRQACAR Trigger: ACGCGCGCAGGCCTGGCGGCGGCGGGACAAGGAGCAGGGCAGGAGACATTTCCCTCGAGAGCATCGTGGGAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184269.3 |
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| CDS GCA 72 bp | GCCCAGCAGCTGGGAGAAGGCCACATAGTACGGCAGTaGAGCAGGGACAGACGCAGAACTGTGCTCCATTCT | + |
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Preference number: 6 (lower is better) Translates to: AQQLGEGHIVRQ*SRDRRRTVLHS Trigger: AGAATGGAGCACAGTTCTGCGTCTGTCCCTGCTGCACTGCCGTACTATGTGGCCTTCTCCCAGCTGCTGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143251.8 ENSMUST00000184269.3 |
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| CDS GCA 72 bp | ACCAACCCCACCAGGGCGATGATGAAGGCGAAGACGTaGAGCAGCCCATGCAAGATCTTGGTCGTGCGTTTG | + |
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Preference number: 6 (lower is better) Translates to: TNPTRAMMKAKT*SSPCKILVVRL Trigger: CAAACGCACGACCAAGATCTTGCATGGGCTGCTGCACGTCTTCGCCTTCATCATCGCCCTGGTGGGGTTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019734.11 ENSMUST00000143251.8 ENSMUST00000184086.8 ENSMUST00000184269.3 |
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| CDS GCA 72 bp | CTTGGACCCACCAGGGCGATGATGAAGGCGAAGACGTaGAGCAGCCCATGCAAGATCTTGGTCGTGCGTTTG | + |
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Preference number: 6 (lower is better) Translates to: LGPTRAMMKAKT*SSPCKILVVRL Trigger: CAAACGCACGACCAAGATCTTGCATGGGCTGCTGCACGTCTTCGCCTTCATCATCGCCCTGGTGGGTCCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183493.8 |
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| CDS CAA 90 bp | AGGGCGATGATGAAGGCGAAGACGTGCAGCAGCCCATGCAAGATCTaGGTCGTGCGTTTGGCTTCTCTTCTGAAGACACGGTACACCAGC | + |
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Preference number: 6 (lower is better) Translates to: RAMMKAKTCSSPCKI*VVRLASLLKTRYTS Trigger: GCTGGTGTACCGTGTCTTCAGAAGAGAAGCCAAACGCACGACCAAGATCTTGCATGGGCTGCTGCACGTCTTCGCCTTCATCATCGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019734.11 ENSMUST00000143251.8 ENSMUST00000150563.3 ENSMUST00000183493.8 ENSMUST00000184086.8 ENSMUST00000184269.3 |
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| CDS CAA 90 bp | AAGGCGAAGACGTGCAGCAGCCCATGCAAGATCTTGGTCGTGCGTTaGGCTTCTCTTCTGAAGACACGGTACACCAGCAGAGCATCTCCT | + |
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Preference number: 6 (lower is better) Translates to: KAKTCSSPCKILVVR*ASLLKTRYTSRASP Trigger: AGGAGATGCTCTGCTGGTGTACCGTGTCTTCAGAAGAGAAGCCAAACGCACGACCAAGATCTTGCATGGGCTGCTGCACGTCTTCGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019734.11 ENSMUST00000143251.8 ENSMUST00000150563.3 ENSMUST00000183493.8 ENSMUST00000184086.8 ENSMUST00000184269.3 |
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| CDS TCA 72 bp | GCAGAGAGAATGAAGCTCCAGGGAACAGGAAGAAGCTaGAACCCACGAGCCACTAAAGGGAGAGAGGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: AERMKLQGTGRS*NPRATKGREGS Trigger: AGAGCCCTCTCTCCCTTTAGTGGCTCGTGGGTTTCAGCTTCTTCCTGTTCCCTGGAGCTTCATTCTCTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184086.8 |
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| CDS CAA 72 bp | ACGTGCAGCAGCCCATGCAAGATCTTGGTCGTGCGTTaGGCTTCTCTTCTGAAGACACGGTACACCAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: TCSSPCKILVVR*ASLLKTRYTSR Trigger: TCTGCTGGTGTACCGTGTCTTCAGAAGAGAAGCCAAACGCACGACCAAGATCTTGCATGGGCTGCTGCACGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019734.11 ENSMUST00000143251.8 ENSMUST00000150563.3 ENSMUST00000183493.8 ENSMUST00000184086.8 ENSMUST00000184269.3 |
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| CDS CAA 72 bp | ATGAAGGCGAAGACGTGCAGCAGCCCATGCAAGATCTaGGTCGTGCGTTTGGCTTCTCTTCTGAAGACACGG | + |
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Preference number: 6 (lower is better) Translates to: MKAKTCSSPCKI*VVRLASLLKTR Trigger: CCGTGTCTTCAGAAGAGAAGCCAAACGCACGACCAAGATCTTGCATGGGCTGCTGCACGTCTTCGCCTTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019734.11 ENSMUST00000143251.8 ENSMUST00000150563.3 ENSMUST00000183493.8 ENSMUST00000184086.8 ENSMUST00000184269.3 |
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| CDS TCA 72 bp | CTTCTGAAGACACGGTACACCAGCAGAGCATCTCCTTaGAGGAAGATCATGCCTATGACCATGCAGAGCGGG | + |
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Preference number: 6 (lower is better) Translates to: LLKTRYTSRASP*RKIMPMTMQSG Trigger: CCCGCTCTGCATGGTCATAGGCATGATCTTCCTTCAAGGAGATGCTCTGCTGGTGTACCGTGTCTTCAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019734.11 ENSMUST00000143251.8 ENSMUST00000150563.3 ENSMUST00000183493.8 ENSMUST00000184086.8 ENSMUST00000184269.3 |
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| CDS CAA 72 bp | TCTTCTGAAGACACGGTACACCAGCAGAGCATCTCCTaGAAGGAAGATCATGCCTATGACCATGCAGAGCGG | + |
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Preference number: 6 (lower is better) Translates to: SSEDTVHQQSIS*KEDHAYDHAER Trigger: CCGCTCTGCATGGTCATAGGCATGATCTTCCTTCAAGGAGATGCTCTGCTGGTGTACCGTGTCTTCAGAAGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019734.11 ENSMUST00000143251.8 ENSMUST00000150563.3 ENSMUST00000183493.8 ENSMUST00000184086.8 ENSMUST00000184269.3 |
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| CDS TCA 72 bp | CATGCAAGATCTTGGTCGTGCGTTTGGCTTCTCTTCTaGAGACACGGTACACCAGCAGAGCATCTCCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: HARSWSCVWLLF*RHGTPAEHLLE Trigger: TTCAAGGAGATGCTCTGCTGGTGTACCGTGTCTTCAGAAGAGAAGCCAAACGCACGACCAAGATCTTGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019734.11 ENSMUST00000143251.8 ENSMUST00000150563.3 ENSMUST00000183493.8 ENSMUST00000184086.8 ENSMUST00000184269.3 |
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| CDS TCA 72 bp | GCAGAGAGAATGAAGCTCCAGGGAACAGGAAGAAGCTaGAACCCACGAGCCACTGCACAAAGTACAGAACAA | + |
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Preference number: 6 (lower is better) Translates to: AERMKLQGTGRS*NPRATAQSTEQ Trigger: TTGTTCTGTACTTTGTGCAGTGGCTCGTGGGTTTCAGCTTCTTCCTGTTCCCTGGAGCTTCATTCTCTCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019734.11 ENSMUST00000143251.8 |
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