Pregenerated sensors for CUL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024231Ensembl transcript IDs: ENSMUST00000025073.12, ENSMUST00000080089.11, ENSMUST00000162301.8, ENSMUST00000234414.2, ENSMUST00000234843.2
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCTGGTGGAACTCCTTAGCATTGAGGGGCCCTGCTATCAACTTGTaGTGGGGGAGTCATCTGCACTGTGGAAGGGTGCCAGCGATGAGC | + |
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Preference number: 1 (lower is better) Translates to: AWWNSLALRGPAINL*WGSHLHCGRVPAMS Trigger: GCTCATCGCTGGCACCCTTCCACAGTGCAGATGACTCCCCCATCACAAGTTGATAGCAGGGCCCCTCAATGCTAAGGAGTTCCACCAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| 3UTR GCA 90 bp | CCCTATACAAGATGCCTGGTGGAACTCCTTAGCATTGAGGGGCCCTaGTATCAACTTGTGATGGGGGAGTCATCTGCACTGTGGAAGGGT | + |
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Preference number: 1 (lower is better) Translates to: PYTRCLVELLSIEGP*YQLVMGESSALWKG Trigger: ACCCTTCCACAGTGCAGATGACTCCCCCATCACAAGTTGATAGCAGGGCCCCTCAATGCTAAGGAGTTCCACCAGGCATCTTGTATAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| 3UTR TCA 90 bp | CTGAGGCCCTCGTCATGGATATGTTTCTGCAGCTCCTCAATCATATaGGGTAAACCACTGGACACAGCACGGAGTAAGACGTACATATTT | + |
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Preference number: 1 (lower is better) Translates to: LRPSSWICFCSSSII*GKPLDTARSKTYIF Trigger: AAATATGTACGTCTTACTCCGTGCTGTGTCCAGTGGTTTACCTCATATGATTGAGGAGCTGCAGAAACATATCCATGACGAGGGCCTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080089.11 |
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| 3UTR TCA 90 bp | CGATCATTTTTAATTTCTCGAAGCAGCATCCGGATGAGGATGTTCTaGAGGGGTTCAACCATTAACTTCCTCCACATATCCAATGCTAGC | + |
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Preference number: 1 (lower is better) Translates to: RSFLISRSSIRMRMF*RGSTINFLHISNAS Trigger: GCTAGCATTGGATATGTGGAGGAAGTTAATGGTTGAACCCCTTCAGAACATCCTCATCCGGATGCTGCTTCGAGAAATTAAAAATGATCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080089.11 ENSMUST00000234843.2 |
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| 3UTR TCA 90 bp | CTTCACCTGTACAGAGATAATGCAACCATGTCAGCTTCCGTCCACTaGAATGCTGGCTATAAAACAATTCAAACATCTGTACACTTTTCT | + |
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Preference number: 1 (lower is better) Translates to: LHLYRDNATMSASVH*NAGYKTIQTSVHFS Trigger: AGAAAAGTGTACAGATGTTTGAATTGTTTTATAGCCAGCATTTCAGTGGACGGAAGCTGACATGGTTGCATTATCTCTGTACAGGTGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080089.11 |
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| 3UTR TCA 90 bp | TGTGATCTAGAGATGGCAGATGGAGAATATAGTAACCAGAGTATCTaGATGCCCCTGTTATCTACTAGAAACAAACTCATGAAATCTCAT | + |
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Preference number: 1 (lower is better) Translates to: CDLEMADGEYSNQSI*MPLLSTRNKLMKSH Trigger: ATGAGATTTCATGAGTTTGTTTCTAGTAGATAACAGGGGCATTCAGATACTCTGGTTACTATATTCTCCATCTGCCATCTCTAGATCACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| 3UTR CCA 90 bp | AACATGAACAAAGGAGTTAATAACCCCATGGATTACTTTCTGGTTTaGATCTTCACCACCACGATCATTTTTAATTTCTCGAAGCAGCAT | + |
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Preference number: 1 (lower is better) Translates to: NMNKGVNNPMDYFLV*IFTTTIIFNFSKQH Trigger: ATGCTGCTTCGAGAAATTAAAAATGATCGTGGTGGTGAAGATCCAAACCAGAAAGTAATCCATGGGGTTATTAACTCCTTTGTTCATGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080089.11 ENSMUST00000234843.2 |
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| 3UTR TCA 90 bp | TTCACAATCTTATGTATTCAAAGACAGAACCCTGGCACTTTTAATTaGACTTTAGATGGGAGCCCAAGTAAATTCATCACCATGACGAAA | + |
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Preference number: 1 (lower is better) Translates to: FTILCIQRQNPGTFN*TLDGSPSKFITMTK Trigger: TTTCGTCATGGTGATGAATTTACTTGGGCTCCCATCTAAAGTTCAATTAAAAGTGCCAGGGTTCTGTCTTTGAATACATAAGATTGTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| 3UTR CCA 90 bp | AGAACATATATTTGGAAACTAATCCCCAAGTCAATCACGGTGTCTTaGTTTCTGATGAAATTGTTGAACTTATTGTTCAAATCAGCGCTG | + |
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Preference number: 1 (lower is better) Translates to: RTYIWKLIPKSITVS*FLMKLLNLLFKSAL Trigger: CAGCGCTGATTTGAACAATAAGTTCAACAATTTCATCAGAAACCAAGACACCGTGATTGACTTGGGGATTAGTTTCCAAATATATGTTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080089.11 |
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| 3UTR-3UTR TCA 90 bp | CTGTGGAAGGGTGCCAGCGATGAGCAGGGGGAGCTGGAAGGAATTCACTGTACTAAATGGGGATGGCAATaGCCTCACAGCTGCACCAGG | + |
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Preference number: 2 (lower is better) Translates to: LWKGASDEQGELEGIHCTKWGWQ*PHSCTR Trigger: CCTGGTGCAGCTGTGAGGTCATTGCCATCCCCATTT...AGTACAGTGAATTCCTTCCAGCTCCCCCTGCTCATCGCTGGCACCCTTCCACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| 3UTR-3UTR TCA 90 bp | CTGTGGAAGGGTGCCAGCGATGAGCAGGGGGAGCTGGAAGGAATTCACTGTACTCATCAACTGCAAACGTaGGGGGAGAAAGCATGGTAC | + |
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Preference number: 2 (lower is better) Translates to: LWKGASDEQGELEGIHCTHQLQT*GEKAWY Trigger: GTACCATGCTTTCTCCCCTCACGTTTGCAGTTGATG...AGTACAGTGAATTCCTTCCAGCTCCCCCTGCTCATCGCTGGCACCCTTCCACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| 3UTR-3UTR TCA 90 bp | CTGTGGAAGGGTGCCAGCGATGAGCAGGGGGAGCTGGAAGGAATTCACTGTACTAGAATGGGTCAAGAGTaGGCAGTTCTTTTCTGCCAG | + |
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Preference number: 2 (lower is better) Translates to: LWKGASDEQGELEGIHCTRMGQE*AVLFCQ Trigger: CTGGCAGAAAAGAACTGCTCACTCTTGACCCATTCT...AGTACAGTGAATTCCTTCCAGCTCCCCCTGCTCATCGCTGGCACCCTTCCACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| 3UTR-3UTR TCA 90 bp | GGTTTAAAACAGCAATGTGATCTAGAGATGGCAGATGGAGAATATAGTAACCAGGAAGGGTGCCAGCGATaGGCAGGGGGAGCTGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: GLKQQCDLEMADGEYSNQEGCQR*AGGAGR Trigger: CCTTCCAGCTCCCCCTGCTCATCGCTGGCACCCTTC...CTGGTTACTATATTCTCCATCTGCCATCTCTAGATCACATTGCTGTTTTAAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| 3UTR-3UTR CCA 90 bp | CATGAAGAATGGGTCAAGAGTGAGCAGTTCTTTTCTGCCAGCCTAGAAGTCACTCAGACGACCAAAGTATaGAGGCACAGGCCTGCTTTC | + |
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Preference number: 2 (lower is better) Translates to: HEEWVKSEQFFSASLEVTQTTKV*RHRPAF Trigger: GAAAGCAGGCCTGTGCCTCCATACTTTGGTCGTCTG...AGTGACTTCTAGGCTGGCAGAAAAGAACTGCTCACTCTTGACCCATTCTTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| 3UTR-3UTR TCA 90 bp | GGTGCCAGCGATGAGCAGGGGGAGCTGGAAGGAATTCACTGTACTCATAGTCTCGTAAATTCATCACCATaGCGAAATGATGAAATGACG | + |
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Preference number: 2 (lower is better) Translates to: GASDEQGELEGIHCTHSLVNSSP*RNDEMT Trigger: CGTCATTTCATCATTTCGTCATGGTGATGAATTTAC...GAGACTATGAGTACAGTGAATTCCTTCCAGCTCCCCCTGCTCATCGCTGGCACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| 3UTR-3UTR GCA 90 bp | CTGTGGAAGGGTGCCAGCGATGAGCAGGGGGAGCTGGAAGGAATTCACTGTACTACATCCTACTCAAAATaGAAAAACTGCTTATGCCAT | + |
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Preference number: 2 (lower is better) Translates to: LWKGASDEQGELEGIHCTTSYSK*KNCLCH Trigger: ATGGCATAAGCAGTTTTTGCATTTTGAGTAGGATGT...AGTACAGTGAATTCCTTCCAGCTCCCCCTGCTCATCGCTGGCACCCTTCCACAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCTAGTCTGTTCCAGTTCTTGTGGCGTATCCTTCTGCATTGACGTAGTAATCCATCAACTGCAAACGTaGGGGGAGAAAGCATGGTAC | + |
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Preference number: 2 (lower is better) Translates to: LLVCSSSCGVSFCIDVVIHQLQT*GEKAWY Trigger: GTACCATGCTTTCTCCCCTCACGTTTGCAGTTGATG...GATTACTACGTCAATGCAGAAGGATACGCCACAAGAACTGGAACAGACTAGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080089.11 |
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| 3UTR-3UTR GCA 90 bp | GGTTTAAAACAGCAATGTGATCTAGAGATGGCAGATGGAGAATATAGTAACCAGATGGAGGCACAGGCCTaGTTTCTCCCACAGGAGCTC | + |
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Preference number: 2 (lower is better) Translates to: GLKQQCDLEMADGEYSNQMEAQA*FLPQEL Trigger: GAGCTCCTGTGGGAGAAAGCAGGCCTGTGCCTCCAT...CTGGTTACTATATTCTCCATCTGCCATCTCTAGATCACATTGCTGTTTTAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| 3UTR-3UTR CCA 90 bp | CCATGTCAGCTTCCGTCCACTGAAATGCTGGCTATAAAACAATTCAAACATCTGCAGACGACCAAAGTATaGAGGCACAGGCCTGCTTTC | + |
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Preference number: 2 (lower is better) Translates to: PCQLPSTEMLAIKQFKHLQTTKV*RHRPAF Trigger: GAAAGCAGGCCTGTGCCTCCATACTTTGGTCGTCTG...CAGATGTTTGAATTGTTTTATAGCCAGCATTTCAGTGGACGGAAGCTGACATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080089.11 |
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| 3UTR-3UTR TCA 90 bp | GGTTTAAAACAGCAATGTGATCTAGAGATGGCAGATGGAGAATATAGTAACCAGAAATGGGGATGGCAATaGCCTCACAGCTGCACCAGG | + |
|
Preference number: 2 (lower is better) Translates to: GLKQQCDLEMADGEYSNQKWGWQ*PHSCTR Trigger: CCTGGTGCAGCTGTGAGGTCATTGCCATCCCCATTT...CTGGTTACTATATTCTCCATCTGCCATCTCTAGATCACATTGCTGTTTTAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| 3UTR-3UTR GCA 90 bp | TGGATTACTTTCTGGTTTGGATCTTCACCACCACGATCATTTTTAATTTCTCGAATGGAGGCACAGGCCTaGTTTCTCCCACAGGAGCTC | + |
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Preference number: 2 (lower is better) Translates to: WITFWFGSSPPRSFLISRMEAQA*FLPQEL Trigger: GAGCTCCTGTGGGAGAAAGCAGGCCTGTGCCTCCAT...TCGAGAAATTAAAAATGATCGTGGTGGTGAAGATCCAAACCAGAAAGTAATCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080089.11 |
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| 3UTR-3UTR TCA 90 bp | GGTTTAAAACAGCAATGTGATCTAGAGATGGCAGATGGAGAATATAGTAACCAGCCTGCTATCAACTTGTaGTGGGGGAGTCATCTGCAC | + |
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Preference number: 2 (lower is better) Translates to: GLKQQCDLEMADGEYSNQPAINL*WGSHLH Trigger: GTGCAGATGACTCCCCCATCACAAGTTGATAGCAGG...CTGGTTACTATATTCTCCATCTGCCATCTCTAGATCACATTGCTGTTTTAAACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| 3UTR-3UTR TCA 90 bp | CATATCTACTCCACCATAGCCATACTGTATATCAGCTTCTGTCAATTTATTCTTAAATGGGGATGGCAATaGCCTCACAGCTGCACCAGG | + |
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Preference number: 2 (lower is better) Translates to: HIYSTIAILYISFCQFILKWGWQ*PHSCTR Trigger: CCTGGTGCAGCTGTGAGGTCATTGCCATCCCCATTT...AAGAATAAATTGACAGAAGCTGATATACAGTATGGCTATGGTGGAGTAGATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080089.11 |
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| 3UTR-3UTR CCA 90 bp | CCACGCACCAGCCTGAAGAACATATATTTGGAAACTAATCCCCAAGTCAATCACCCATGGATTACTTTCTaGTTTGGATCTTCACCACCA | + |
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Preference number: 2 (lower is better) Translates to: PRTSLKNIYLETNPQVNHPWITF*FGSSPP Trigger: TGGTGGTGAAGATCCAAACCAGAAAGTAATCCATGG...GTGATTGACTTGGGGATTAGTTTCCAAATATATGTTCTTCAGGCTGGTGCGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080089.11 |
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| 3UTR CAA 90 bp | GCCTTTGCTGTATTCTTCCCAGTACCTATGATACATAACAAGCACTaGTTCTTCAGACTCCAGAACTCTTATACAAATGCCGAACGTGAC | + |
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Preference number: 2 (lower is better) Translates to: AFAVFFPVPMIHNKH*FFRLQNSYTNAERD Trigger: GTCACGTTCGGCATTTGTATAAGAGTTCTGGAGTCTGAAGAACAAGTGCTTGTTATGTATCATAGGTACTGGGAAGAATACAGCAAAGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234843.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCTTATGCCATTAGCTCAAATTCACAATCTTATGTATTCAAAGACAGAACCCTGTTTGCTGCTTGGGTaGCTCATAGGCATTTACAGA | + |
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Preference number: 2 (lower is better) Translates to: LLMPLAQIHNLMYSKTEPCLLLG*LIGIYR Trigger: TCTGTAAATGCCTATGAGTCACCCAAGCAGCAAACA...GGGTTCTGTCTTTGAATACATAAGATTGTGAATTTGAGCTAATGGCATAAGCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| 3UTR-3UTR CCA 90 bp | ACCCCATGGATTACTTTCTGGTTTGGATCTTCACCACCACGATCATTTTTAATTCCATGGATTACTTTCTaGTTTGGATCTTCACCACCA | + |
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Preference number: 2 (lower is better) Translates to: TPWITFWFGSSPPRSFLIPWITF*FGSSPP Trigger: TGGTGGTGAAGATCCAAACCAGAAAGTAATCCATGG...AATTAAAAATGATCGTGGTGGTGAAGATCCAAACCAGAAAGTAATCCATGGGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080089.11 ENSMUST00000234843.2 |
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| 3UTR CAA 90 bp | AAACTAATCCCCAAGTCAATCACGGTGTCTTGGTTTCTGATGAAATaGTTGAACTTATTGTTCAAATCAGCGCTGACACTCATGTCTGTA | + |
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Preference number: 2 (lower is better) Translates to: KLIPKSITVSWFLMK*LNLLFKSALTLMSV Trigger: TACAGACATGAGTGTCAGCGCTGATTTGAACAATAAGTTCAACAATTTCATCAGAAACCAAGACACCGTGATTGACTTGGGGATTAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080089.11 |
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| 3UTR CAA 90 bp | GTAGCTGACAGTTTCACTGTTGTTAAAGGCAAGAAGAACTGCCATTaGGTAGGTTGTAACCATAGCTACATATGGTTTTCCCAAATAGTT | + |
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Preference number: 2 (lower is better) Translates to: VADSFTVVKGKKNCH*VGCNHSYIWFSQIV Trigger: AACTATTTGGGAAAACCATATGTAGCTATGGTTACAACCTACCAAATGGCAGTTCTTCTTGCCTTTAACAACAGTGAAACTGTCAGCTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080089.11 |
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| 3UTR-3UTR CCA 90 bp | CAACCATGTCAGCTTCCGTCCACTGAAATGCTGGCTATAAAACAATTCAAACATCTTTTCTCTAGCTCTTaGGGAATTGCAAATGTAGAT | + |
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Preference number: 2 (lower is better) Translates to: QPCQLPSTEMLAIKQFKHLFSSS*GIANVD Trigger: ATCTACATTTGCAATTCCCCAAGAGCTAGAGAAAAG...ATGTTTGAATTGTTTTATAGCCAGCATTTCAGTGGACGGAAGCTGACATGGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080089.11 |
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| 3UTR TCA 72 bp | GGGGGAGTCATCTGCACTGTGGAAGGGTGCCAGCGATaGGCAGGGGGAGCTGGAAGGAATTCACTGTACTCA | + |
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Preference number: 3 (lower is better) Translates to: GGVICTVEGCQR*AGGAGRNSLYS Trigger: TGAGTACAGTGAATTCCTTCCAGCTCCCCCTGCTCATCGCTGGCACCCTTCCACAGTGCAGATGACTCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| 3UTR CCA 72 bp | TGCTATCAACTTGTGATGGGGGAGTCATCTGCACTGTaGAAGGGTGCCAGCGATGAGCAGGGGGAGCTGGAA | + |
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Preference number: 3 (lower is better) Translates to: CYQLVMGESSAL*KGASDEQGELE Trigger: TTCCAGCTCCCCCTGCTCATCGCTGGCACCCTTCCACAGTGCAGATGACTCCCCCATCACAAGTTGATAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| 3UTR TCA 72 bp | TTTCTCCCACAGGAGCTCACCAAATGGGGATGGCAATaGCCTCACAGCTGCACCAGGAGAAGGTGTCATGCG | + |
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Preference number: 3 (lower is better) Translates to: FLPQELTKWGWQ*PHSCTRRRCHA Trigger: CGCATGACACCTTCTCCTGGTGCAGCTGTGAGGTCATTGCCATCCCCATTTGGTGAGCTCCTGTGGGAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080089.11 |
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| 3UTR TCA 72 bp | AACTCCTTAGCATTGAGGGGCCCTGCTATCAACTTGTaGTGGGGGAGTCATCTGCACTGTGGAAGGGTGCCA | + |
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Preference number: 3 (lower is better) Translates to: NSLALRGPAINL*WGSHLHCGRVP Trigger: TGGCACCCTTCCACAGTGCAGATGACTCCCCCATCACAAGTTGATAGCAGGGCCCCTCAATGCTAAGGAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| 3UTR-3UTR CAA 90 bp | GACCTCACAGCTGCACCAGGAGAAGGTGTCATGCGACGTAACTGTATTCATCTGGCGGACAATAGCAGCTaGAAGATACATTTTCCGGTC | + |
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Preference number: 3 (lower is better) Translates to: DLTAAPGEGVMRRNCIHLADNSS*KIHFPV Trigger: GACCGGAAAATGTATCTTCAAGCTGCTATTGTCCGC...CAGATGAATACAGTTACGTCGCATGACACCTTCTCCTGGTGCAGCTGTGAGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080089.11 |
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| 3UTR TCA 72 bp | TCGTCATGGATATGTTTCTGCAGCTCCTCAATCATATaGGGTAAACCACTGGACACAGCACGGAGTAAGACG | + |
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Preference number: 3 (lower is better) Translates to: SSWICFCSSSII*GKPLDTARSKT Trigger: CGTCTTACTCCGTGCTGTGTCCAGTGGTTTACCTCATATGATTGAGGAGCTGCAGAAACATATCCATGACGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080089.11 |
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| 3UTR CCA 72 bp | AAACTCATGAAATCTCATGTCCCTATACAAGATGCCTaGTGGAACTCCTTAGCATTGAGGGGCCCTGCTATC | + |
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Preference number: 3 (lower is better) Translates to: KLMKSHVPIQDA*WNSLALRGPAI Trigger: GATAGCAGGGCCCCTCAATGCTAAGGAGTTCCACCAGGCATCTTGTATAGGGACATGAGATTTCATGAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| 3UTR TCA 72 bp | AAAACTGATTCCACAAATAGTGTTGGCATATGTTCCTaGGTAAGGTTACTGGTCGCTCTGAGGCCCTCGTCA | + |
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Preference number: 3 (lower is better) Translates to: KTDSTNSVGICS*VRLLVALRPSS Trigger: TGACGAGGGCCTCAGAGCGACCAGTAACCTTACTCAGGAACATATGCCAACACTATTTGTGGAATCAGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080089.11 |
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| 3UTR TCA 72 bp | TTAATTTCTCGAAGCAGCATCCGGATGAGGATGTTCTaGAGGGGTTCAACCATTAACTTCCTCCACATATCC | + |
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Preference number: 3 (lower is better) Translates to: LISRSSIRMRMF*RGSTINFLHIS Trigger: GGATATGTGGAGGAAGTTAATGGTTGAACCCCTTCAGAACATCCTCATCCGGATGCTGCTTCGAGAAATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080089.11 ENSMUST00000234843.2 |
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| 3UTR TCA 72 bp | ACATATTTGCCATGTCGTTCTTCCTCTCTTGCTGAATaGTGCTGTGGCACTCTGAATGTAAGAACTGTAAGT | + |
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Preference number: 3 (lower is better) Translates to: TYLPCRSSSLAE*CCGTLNVRTVS Trigger: ACTTACAGTTCTTACATTCAGAGTGCCACAGCATCATTCAGCAAGAGAGGAAGAACGACATGGCAAATATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080089.11 |
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| 3UTR TCA 72 bp | GAGATGGCAGATGGAGAATATAGTAACCAGAGTATCTaGATGCCCCTGTTATCTACTAGAAACAAACTCATG | + |
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Preference number: 3 (lower is better) Translates to: EMADGEYSNQSI*MPLLSTRNKLM Trigger: CATGAGTTTGTTTCTAGTAGATAACAGGGGCATTCAGATACTCTGGTTACTATATTCTCCATCTGCCATCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| 3UTR-3UTR CAA 90 bp | AACATATATTTGGAAACTAATCCCCAAGTCAATCACGGTGTCTTGGTTTCTGATATGAAGCTAGTGAGCTaGTCCTCCACTTCATTTTCA | + |
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Preference number: 3 (lower is better) Translates to: NIYLETNPQVNHGVLVSDMKLVS*SSTSFS Trigger: TGAAAATGAAGTGGAGGACAAGCTCACTAGCTTCAT...ATCAGAAACCAAGACACCGTGATTGACTTGGGGATTAGTTTCCAAATATATGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080089.11 |
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| 3UTR TCA 72 bp | AATGATGAAATGACGAAATGCTGTTTGCTGCTTGGGTaGCTCATAGGCATTTACAGATGTCTCATTTTCTGT | + |
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Preference number: 3 (lower is better) Translates to: NDEMTKCCLLLG*LIGIYRCLIFC Trigger: ACAGAAAATGAGACATCTGTAAATGCCTATGAGTCACCCAAGCAGCAAACAGCATTTCGTCATTTCATCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| 3UTR TCA 72 bp | TACAGAGATAATGCAACCATGTCAGCTTCCGTCCACTaGAATGCTGGCTATAAAACAATTCAAACATCTGTA | + |
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Preference number: 3 (lower is better) Translates to: YRDNATMSASVH*NAGYKTIQTSV Trigger: TACAGATGTTTGAATTGTTTTATAGCCAGCATTTCAGTGGACGGAAGCTGACATGGTTGCATTATCTCTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080089.11 |
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| 3UTR TCA 72 bp | TTATGTATTCAAAGACAGAACCCTGGCACTTTTAATTaGACTTTAGATGGGAGCCCAAGTAAATTCATCACC | + |
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Preference number: 3 (lower is better) Translates to: LCIQRQNPGTFN*TLDGSPSKFIT Trigger: GGTGATGAATTTACTTGGGCTCCCATCTAAAGTTCAATTAAAAGTGCCAGGGTTCTGTCTTTGAATACATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| 3UTR GCA 72 bp | CTTCTAGTCTGTTCCAGTTCTTGTGGCGTATCCTTCTaGATTGACGTAGTAATCTTAAATTTTGTTCTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: LLVCSSSCGVSF*IDVVILNFVLL Trigger: TAAGAGAACAAAATTTAAGATTACTACGTCAATGCAGAAGGATACGCCACAAGAACTGGAACAGACTAGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080089.11 |
||
| 3UTR TCA 72 bp | ATAGGCATTTACAGATGTCTCATTTTCTGTCCAACCTaGTATTCCGTCATCATAGAAAAAGGCATTATGCTT | + |
|
Preference number: 3 (lower is better) Translates to: IGIYRCLIFCPT*YSVIIEKGIML Trigger: AAGCATAATGCCTTTTTCTATGATGACGGAATATCAGGTTGGACAGAAAATGAGACATCTGTAAATGCCTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGCCTGCTTTCTCCCACAGGAGCTCACCAAATGGGGATGGCAATGACCTCAATGAAGGAGCCTGAGTaGGAGGCCACGCACCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TGLLSPTGAHQMGMAMTSMKEPE*EATHQP Trigger: AGGCTGGTGCGTGGCCTCTCACTCAGGCTCCTTCAT...TGAGGTCATTGCCATCCCCATTTGGTGAGCTCCTGTGGGAGAAAGCAGGCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
||
| CDS-3UTR TCA 90 bp | GGTGCCAGCGATGAGCAGGGGGAGCTGGAAGGAATTCACTGTACTCATAGTCTCGTAGATGAAGGAGCCTaGGTGAGAGGCCACGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: GASDEQGELEGIHCTHSLVDEGA*VRGHAP Trigger: TGGTGCGTGGCCTCTCACTCAGGCTCCTTCATCTAC...GAGACTATGAGTACAGTGAATTCCTTCCAGCTCCCCCTGCTCATCGCTGGCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
||
| CDS-3UTR TCA 90 bp | AAAGTATGGAGGCACAGGCCTGCTTTCTCCCACAGGAGCTCACCAAATGGGGATGTAGATGAAGGAGCCTaGGTGAGAGGCCACGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: KVWRHRPAFSHRSSPNGDVDEGA*VRGHAP Trigger: TGGTGCGTGGCCTCTCACTCAGGCTCCTTCATCTAC...ATCCCCATTTGGTGAGCTCCTGTGGGAGAAAGCAGGCCTGTGCCTCCATACTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
||
| CDS-3UTR CCA 90 bp | CTGTGGAAGGGTGCCAGCGATGAGCAGGGGGAGCTGGAAGGAATTCACTGTACTCTGAGGCCCTCGTCATaGATATGTTTCTGCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LWKGASDEQGELEGIHCTLRPSS*ICFCSS Trigger: GGAGCTGCAGAAACATATCCATGACGAGGGCCTCAG...AGTACAGTGAATTCCTTCCAGCTCCCCCTGCTCATCGCTGGCACCCTTCCACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
||
| CDS-3UTR TCA 90 bp | AAAGTATGGAGGCACAGGCCTGCTTTCTCCCACAGGAGCTCACCAAATGGGGATGAAGCAGCATCCGGATaGGGATGTTCTGAAGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KVWRHRPAFSHRSSPNGDEAASG*GCSEGV Trigger: AACCCCTTCAGAACATCCTCATCCGGATGCTGCTTC...ATCCCCATTTGGTGAGCTCCTGTGGGAGAAAGCAGGCCTGTGCCTCCATACTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
||
| CDS-3UTR CCA 90 bp | CTGTGGAAGGGTGCCAGCGATGAGCAGGGGGAGCTGGAAGGAATTCACTGTACTTGTAAGAACTGTAAGTaGTCTGCTACCATCCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LWKGASDEQGELEGIHCTCKNCK*SATIRC Trigger: GCAGCGGATGGTAGCAGACCACTTACAGTTCTTACA...AGTACAGTGAATTCCTTCCAGCTCCCCCTGCTCATCGCTGGCACCCTTCCACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
||
| CDS-3UTR CCA 90 bp | CTGTGGAAGGGTGCCAGCGATGAGCAGGGGGAGCTGGAAGGAATTCACTGTACTAACCTGGCTCTTGACTaGCTGATTACTTGTGGCGTA | + |
|
Preference number: 4 (lower is better) Translates to: LWKGASDEQGELEGIHCTNLALD*LITCGV Trigger: TACGCCACAAGTAATCAGCCAGTCAAGAGCCAGGTT...AGTACAGTGAATTCCTTCCAGCTCCCCCTGCTCATCGCTGGCACCCTTCCACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025073.12 |
||
| CDS-3UTR CCA 90 bp | GGTGCCAGCGATGAGCAGGGGGAGCTGGAAGGAATTCACTGTACTCATAGTCTCTCATCTGCAGATGCTTaGCTGCGCTCGATGTACTGT | + |
|
Preference number: 4 (lower is better) Translates to: GASDEQGELEGIHCTHSLSSADA*LRSMYC Trigger: ACAGTACATCGAGCGCAGCCAAGCATCTGCAGATGA...GAGACTATGAGTACAGTGAATTCCTTCCAGCTCCCCCTGCTCATCGCTGGCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGCCTGCTTTCTCCCACAGGAGCTCACCAAATGGGGATGGCAATGACCTCAGTTGGCATATGTTCCTaGGTAAGGTTACTGGTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: TGLLSPTGAHQMGMAMTSVGICS*VRLLVA Trigger: AGCGACCAGTAACCTTACTCAGGAACATATGCCAAC...TGAGGTCATTGCCATCCCCATTTGGTGAGCTCCTGTGGGAGAAAGCAGGCCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGCCTGCTTTCTCCCACAGGAGCTCACCAAATGGGGATGGCAATGACCTCAGGCCACGCACCAGCCTaGAGAACATATATTTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TGLLSPTGAHQMGMAMTSGHAPA*RTYIWK Trigger: TTTCCAAATATATGTTCTTCAGGCTGGTGCGTGGCC...TGAGGTCATTGCCATCCCCATTTGGTGAGCTCCTGTGGGAGAAAGCAGGCCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
||
| CDS-3UTR TCA 90 bp | GGTGCCAGCGATGAGCAGGGGGAGCTGGAAGGAATTCACTGTACTCATAGTCTCATTGAACCTGGCTCTTaGCTGGCTGATTACTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GASDEQGELEGIHCTHSLIEPGS*LADYLW Trigger: CCACAAGTAATCAGCCAGTCAAGAGCCAGGTTCAAT...GAGACTATGAGTACAGTGAATTCCTTCCAGCTCCCCCTGCTCATCGCTGGCACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025073.12 |
||
| CDS-3UTR GCA 90 bp | ACAGGCCTGCTTTCTCCCACAGGAGCTCACCAAATGGGGATGGCAATGACCTCAGTAACTGTATTCATCTaGAGATGCTTGGCTGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TGLLSPTGAHQMGMAMTSVTVFI*RCLAAL Trigger: GAGCGCAGCCAAGCATCTGCAGATGAATACAGTTAC...TGAGGTCATTGCCATCCCCATTTGGTGAGCTCCTGTGGGAGAAAGCAGGCCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
||
| CDS-3UTR GCA 90 bp | GGTGCCAGCGATGAGCAGGGGGAGCTGGAAGGAATTCACTGTACTCATAGTCTCCCGAAGCACTTTTCGTaGTTTCATGATGCGGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: GASDEQGELEGIHCTHSLPKHFS*FHDADN Trigger: ATTGTCCGCATCATGAAAGCACGAAAAGTGCTTCGG...GAGACTATGAGTACAGTGAATTCCTTCCAGCTCCCCCTGCTCATCGCTGGCACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162301.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGCCTGCTTTCTCCCACAGGAGCTCACCAAATGGGGATGGCAATGACCTCATATGAGGTAAACCACTaGACACAGCACGGAGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TGLLSPTGAHQMGMAMTSYEVNH*TQHGVR Trigger: TCTTACTCCGTGCTGTGTCCAGTGGTTTACCTCATA...TGAGGTCATTGCCATCCCCATTTGGTGAGCTCCTGTGGGAGAAAGCAGGCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
||
| CDS-3UTR CCA 90 bp | GGTGCCAGCGATGAGCAGGGGGAGCTGGAAGGAATTCACTGTACTCATAGTCTCTATGAGGTAAACCACTaGACACAGCACGGAGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GASDEQGELEGIHCTHSLYEVNH*TQHGVR Trigger: TCTTACTCCGTGCTGTGTCCAGTGGTTTACCTCATA...GAGACTATGAGTACAGTGAATTCCTTCCAGCTCCCCCTGCTCATCGCTGGCACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
||
| CDS-3UTR GCA 90 bp | CTGTGGAAGGGTGCCAGCGATGAGCAGGGGGAGCTGGAAGGAATTCACTGTACTTCTGTATACATTCGATaGAGCTTGCTGGTAAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: LWKGASDEQGELEGIHCTSVYIR*SLLVNS Trigger: TGAGTTTACCAGCAAGCTGCATCGAATGTATACAGA...AGTACAGTGAATTCCTTCCAGCTCCCCCTGCTCATCGCTGGCACCCTTCCACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
||
| CDS-3UTR GCA 90 bp | CTGTGGAAGGGTGCCAGCGATGAGCAGGGGGAGCTGGAAGGAATTCACTGTACTAAAGGCAAGAAGAACTaGCATTTGGTAGGTTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: LWKGASDEQGELEGIHCTKGKKN*HLVGCN Trigger: GTTACAACCTACCAAATGGCAGTTCTTCTTGCCTTT...AGTACAGTGAATTCCTTCCAGCTCCCCCTGCTCATCGCTGGCACCCTTCCACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
||
| CDS-3UTR CCA 90 bp | AAAGTATGGAGGCACAGGCCTGCTTTCTCCCACAGGAGCTCACCAAATGGGGATAAGTCTTTCTCCAAGTaGTTCAGGATAGGCCACACA | + |
|
Preference number: 4 (lower is better) Translates to: KVWRHRPAFSHRSSPNGDKSFSK*FRIGHT Trigger: TGTGTGGCCTATCCTGAACCACTTGGAGAAAGACTT...ATCCCCATTTGGTGAGCTCCTGTGGGAGAAAGCAGGCCTGTGCCTCCATACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025073.12 ENSMUST00000080089.11 ENSMUST00000162301.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGCCTGCTTTCTCCCACAGGAGCTCACCAAATGGGGATGGCAATGACCTCAGATTACTTTCTGGTTTaGATCTTCACCACCACGATC | + |
|
Preference number: 4 (lower is better) Translates to: TGLLSPTGAHQMGMAMTSDYFLV*IFTTTI Trigger: GATCGTGGTGGTGAAGATCCAAACCAGAAAGTAATC...TGAGGTCATTGCCATCCCCATTTGGTGAGCTCCTGTGGGAGAAAGCAGGCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
||
| CDS-3UTR TCA 90 bp | CATGAAGAATGGGTCAAGAGTGAGCAGTTCTTTTCTGCCAGCCTAGAAGTCACTGAAGCAGCATCCGGATaGGGATGTTCTGAAGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: HEEWVKSEQFFSASLEVTEAASG*GCSEGV Trigger: AACCCCTTCAGAACATCCTCATCCGGATGCTGCTTC...AGTGACTTCTAGGCTGGCAGAAAAGAACTGCTCACTCTTGACCCATTCTTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
||
| CDS-3UTR TCA 90 bp | CTGTGGAAGGGTGCCAGCGATGAGCAGGGGGAGCTGGAAGGAATTCACTGTACTCATCAAGTAATGATTTaGTTGTTTTGGTCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LWKGASDEQGELEGIHCTHQVMI*LFWSAP Trigger: AGGAGCTGACCAAAACAATCAAATCATTACTTGATG...AGTACAGTGAATTCCTTCCAGCTCCCCCTGCTCATCGCTGGCACCCTTCCACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
||
| CDS-3UTR GCA 90 bp | AAAGTATGGAGGCACAGGCCTGCTTTCTCCCACAGGAGCTCACCAAATGGGGATAAAGGCAAGAAGAACTaGCATTTGGTAGGTTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: KVWRHRPAFSHRSSPNGDKGKKN*HLVGCN Trigger: GTTACAACCTACCAAATGGCAGTTCTTCTTGCCTTT...ATCCCCATTTGGTGAGCTCCTGTGGGAGAAAGCAGGCCTGTGCCTCCATACTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
||
| CDS-3UTR CCA 90 bp | GGTGCCAGCGATGAGCAGGGGGAGCTGGAAGGAATTCACTGTACTCATAGTCTCCTTTTCTCTAGCTCTTaGGGAATTGCAAATGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GASDEQGELEGIHCTHSLLFSSS*GIANVD Trigger: ATCTACATTTGCAATTCCCCAAGAGCTAGAGAAAAG...GAGACTATGAGTACAGTGAATTCCTTCCAGCTCCCCCTGCTCATCGCTGGCACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
||
| CDS-3UTR CCA 90 bp | CATGAAGAATGGGTCAAGAGTGAGCAGTTCTTTTCTGCCAGCCTAGAAGTCACTTCATCTGCAGATGCTTaGCTGCGCTCGATGTACTGT | + |
|
Preference number: 4 (lower is better) Translates to: HEEWVKSEQFFSASLEVTSSADA*LRSMYC Trigger: ACAGTACATCGAGCGCAGCCAAGCATCTGCAGATGA...AGTGACTTCTAGGCTGGCAGAAAAGAACTGCTCACTCTTGACCCATTCTTCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
||
| CDS-3UTR TCA 90 bp | CATGAAGAATGGGTCAAGAGTGAGCAGTTCTTTTCTGCCAGCCTAGAAGTCACTCGGACAATAGCAGCTTaGAGATACATTTTCCGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HEEWVKSEQFFSASLEVTRTIAA*RYIFRS Trigger: GGACCGGAAAATGTATCTTCAAGCTGCTATTGTCCG...AGTGACTTCTAGGCTGGCAGAAAAGAACTGCTCACTCTTGACCCATTCTTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162301.8 |
||
| CDS-3UTR CCA 90 bp | AAAGTATGGAGGCACAGGCCTGCTTTCTCCCACAGGAGCTCACCAAATGGGGATCTTTTCTCTAGCTCTTaGGGAATTGCAAATGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KVWRHRPAFSHRSSPNGDLFSSS*GIANVD Trigger: ATCTACATTTGCAATTCCCCAAGAGCTAGAGAAAAG...ATCCCCATTTGGTGAGCTCCTGTGGGAGAAAGCAGGCCTGTGCCTCCATACTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
||
| CDS-3UTR TCA 90 bp | GTGACTCATAGGCATTTACAGATGTCTCATTTTCTGTCCAACCTGATATTCCGTGGCCACGCACCAGCCTaGAGAACATATATTTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VTHRHLQMSHFLSNLIFRGHAPA*RTYIWK Trigger: TTTCCAAATATATGTTCTTCAGGCTGGTGCGTGGCC...ACGGAATATCAGGTTGGACAGAAAATGAGACATCTGTAAATGCCTATGAGTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTCCCAGTACCTATGATACATAACAAGCACTTGTTCTTCAGACTCCAGAACGCGGTCATTCCATGTTaGTCGCTCGACATATTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FFPVPMIHNKHLFFRLQNAVIPC*SLDIFQ Trigger: TTGGAATATGTCGAGCGAGCAACATGGAATGACCGC...GTTCTGGAGTCTGAAGAACAAGTGCTTGTTATGTATCATAGGTACTGGGAAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234843.2 |
||
| CDS-3UTR GCA 90 bp | GTGACTCATAGGCATTTACAGATGTCTCATTTTCTGTCCAACCTGATATTCCGTGTAACTGTATTCATCTaGAGATGCTTGGCTGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VTHRHLQMSHFLSNLIFRVTVFI*RCLAAL Trigger: GAGCGCAGCCAAGCATCTGCAGATGAATACAGTTAC...ACGGAATATCAGGTTGGACAGAAAATGAGACATCTGTAAATGCCTATGAGTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
||
| CDS-3UTR TCA 90 bp | GTGACTCATAGGCATTTACAGATGTCTCATTTTCTGTCCAACCTGATATTCCGTAGCTCCTCAATCATATaGGGTAAACCACTGGACACA | + |
|
Preference number: 4 (lower is better) Translates to: VTHRHLQMSHFLSNLIFRSSSII*GKPLDT Trigger: TGTGTCCAGTGGTTTACCTCATATGATTGAGGAGCT...ACGGAATATCAGGTTGGACAGAAAATGAGACATCTGTAAATGCCTATGAGTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
||
| CDS-3UTR TCA 90 bp | GGTTTAAAACAGCAATGTGATCTAGAGATGGCAGATGGAGAATATAGTAACCAGGTTGGCATATGTTCCTaGGTAAGGTTACTGGTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLKQQCDLEMADGEYSNQVGICS*VRLLVA Trigger: AGCGACCAGTAACCTTACTCAGGAACATATGCCAAC...CTGGTTACTATATTCTCCATCTGCCATCTCTAGATCACATTGCTGTTTTAAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
||
| CDS-3UTR TCA 90 bp | GTGACTCATAGGCATTTACAGATGTCTCATTTTCTGTCCAACCTGATATTCCGTTCAGCTTCCGTCCACTaGAATGCTGGCTATAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: VTHRHLQMSHFLSNLIFRSASVH*NAGYKT Trigger: TGTTTTATAGCCAGCATTTCAGTGGACGGAAGCTGA...ACGGAATATCAGGTTGGACAGAAAATGAGACATCTGTAAATGCCTATGAGTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
||
| CDS-3UTR GCA 90 bp | CATAAGTGGTTCATTCATATCTACTCCACCATAGCCATACTGTATATCAGCTTCGCGGTCATTCCATGTTaGTCGCTCGACATATTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HKWFIHIYSTIAILYISFAVIPC*SLDIFQ Trigger: TTGGAATATGTCGAGCGAGCAACATGGAATGACCGC...GAAGCTGATATACAGTATGGCTATGGTGGAGTAGATATGAATGAACCACTTATG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080089.11 ENSMUST00000234414.2 ENSMUST00000234843.2 |
||
| CDS-3UTR CCA 90 bp | GTGACTCATAGGCATTTACAGATGTCTCATTTTCTGTCCAACCTGATATTCCGTAAGTCTTTCTCCAAGTaGTTCAGGATAGGCCACACA | + |
|
Preference number: 4 (lower is better) Translates to: VTHRHLQMSHFLSNLIFRKSFSK*FRIGHT Trigger: TGTGTGGCCTATCCTGAACCACTTGGAGAAAGACTT...ACGGAATATCAGGTTGGACAGAAAATGAGACATCTGTAAATGCCTATGAGTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
||
| CDS-3UTR TCA 90 bp | GGTTTAAAACAGCAATGTGATCTAGAGATGGCAGATGGAGAATATAGTAACCAGTCAGCTTCCGTCCACTaGAATGCTGGCTATAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: GLKQQCDLEMADGEYSNQSASVH*NAGYKT Trigger: TGTTTTATAGCCAGCATTTCAGTGGACGGAAGCTGA...CTGGTTACTATATTCTCCATCTGCCATCTCTAGATCACATTGCTGTTTTAAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
||
| CDS-3UTR TCA 90 bp | CTGCTTATGCCATTAGCTCAAATTCACAATCTTATGTATTCAAAGACAGAACCCATTGAACCTGGCTCTTaGCTGGCTGATTACCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLMPLAQIHNLMYSKTEPIEPGS*LADYLL Trigger: CAAGAGGTAATCAGCCAGTCAAGAGCCAGGTTCAAT...GGGTTCTGTCTTTGAATACATAAGATTGTGAATTTGAGCTAATGGCATAAGCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162301.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTTATGCCATTAGCTCAAATTCACAATCTTATGTATTCAAAGACAGAACCCGCGGTCATTCCATGTTaGTCGCTCGACATATTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LLMPLAQIHNLMYSKTEPAVIPC*SLDIFQ Trigger: TTGGAATATGTCGAGCGAGCAACATGGAATGACCGC...GGGTTCTGTCTTTGAATACATAAGATTGTGAATTTGAGCTAATGGCATAAGCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTTATGCCATTAGCTCAAATTCACAATCTTATGTATTCAAAGACAGAACCCTATAGTCGGCGCCTTTaGTGTATTCTTCCCAGTACC | + |
|
Preference number: 4 (lower is better) Translates to: LLMPLAQIHNLMYSKTEPYSRRL*CILPST Trigger: GGTACTGGGAAGAATACAGCAAAGGCGCCGACTATA...GGGTTCTGTCTTTGAATACATAAGATTGTGAATTTGAGCTAATGGCATAAGCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
||
| CDS-3UTR CCA 90 bp | CATAAGTGGTTCATTCATATCTACTCCACCATAGCCATACTGTATATCAGCTTCAAGTCTTTCTCCAAGTaGTTCAGGATAGGCCACACA | + |
|
Preference number: 4 (lower is better) Translates to: HKWFIHIYSTIAILYISFKSFSK*FRIGHT Trigger: TGTGTGGCCTATCCTGAACCACTTGGAGAAAGACTT...GAAGCTGATATACAGTATGGCTATGGTGGAGTAGATATGAATGAACCACTTATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080089.11 ENSMUST00000234414.2 |
||
| CDS-3UTR CCA 90 bp | CTGCTTATGCCATTAGCTCAAATTCACAATCTTATGTATTCAAAGACAGAACCCTGTAAGAACTGTAAGTaGTCTGCTACCATCCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLMPLAQIHNLMYSKTEPCKNCK*SATIRC Trigger: GCAGCGGATGGTAGCAGACCACTTACAGTTCTTACA...GGGTTCTGTCTTTGAATACATAAGATTGTGAATTTGAGCTAATGGCATAAGCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
||
| CDS-3UTR TCA 90 bp | CTGCTTATGCCATTAGCTCAAATTCACAATCTTATGTATTCAAAGACAGAACCCAGCTCCTCAATCATATaGGGTAAACCACTGGACACA | + |
|
Preference number: 4 (lower is better) Translates to: LLMPLAQIHNLMYSKTEPSSSII*GKPLDT Trigger: TGTGTCCAGTGGTTTACCTCATATGATTGAGGAGCT...GGGTTCTGTCTTTGAATACATAAGATTGTGAATTTGAGCTAATGGCATAAGCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
||
| CDS-3UTR GCA 90 bp | TCATATCTACTCCACCATAGCCATACTGTATATCAGCTTCTGTCAATTTATTCTGCGGTCATTCCATGTTaGTCGCTCGACATATTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SYLLHHSHTVYQLLSIYSAVIPC*SLDIFQ Trigger: TTGGAATATGTCGAGCGAGCAACATGGAATGACCGC...AGAATAAATTGACAGAAGCTGATATACAGTATGGCTATGGTGGAGTAGATATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080089.11 ENSMUST00000234414.2 ENSMUST00000234843.2 |
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| CDS-3UTR CCA 90 bp | GTTCATTCATATCTACTCCACCATAGCCATACTGTATATCAGCTTCTGTCAATTAAGTCTTTCTCCAAGTaGTTCAGGATAGGCCACACA | + |
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Preference number: 4 (lower is better) Translates to: VHSYLLHHSHTVYQLLSIKSFSK*FRIGHT Trigger: TGTGTGGCCTATCCTGAACCACTTGGAGAAAGACTT...AATTGACAGAAGCTGATATACAGTATGGCTATGGTGGAGTAGATATGAATGAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080089.11 ENSMUST00000234414.2 |
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| CDS-3UTR CCA 90 bp | GGTTTAAAACAGCAATGTGATCTAGAGATGGCAGATGGAGAATATAGTAACCAGCCATGGATTACTTTCTaGTTTGGATCTTCACCACCA | + |
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Preference number: 4 (lower is better) Translates to: GLKQQCDLEMADGEYSNQPWITF*FGSSPP Trigger: TGGTGGTGAAGATCCAAACCAGAAAGTAATCCATGG...CTGGTTACTATATTCTCCATCTGCCATCTCTAGATCACATTGCTGTTTTAAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| CDS-3UTR TCA 90 bp | GGTTTAAAACAGCAATGTGATCTAGAGATGGCAGATGGAGAATATAGTAACCAGTCTTCCCAGTACCTATaGTACATAACAAGCACTTGT | + |
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Preference number: 4 (lower is better) Translates to: GLKQQCDLEMADGEYSNQSSQYL*YITSTC Trigger: ACAAGTGCTTGTTATGTATCATAGGTACTGGGAAGA...CTGGTTACTATATTCTCCATCTGCCATCTCTAGATCACATTGCTGTTTTAAACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| CDS-3UTR CCA 90 bp | CTGCTTATGCCATTAGCTCAAATTCACAATCTTATGTATTCAAAGACAGAACCCCCATGGATTACTTTCTaGTTTGGATCTTCACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LLMPLAQIHNLMYSKTEPPWITF*FGSSPP Trigger: TGGTGGTGAAGATCCAAACCAGAAAGTAATCCATGG...GGGTTCTGTCTTTGAATACATAAGATTGTGAATTTGAGCTAATGGCATAAGCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| 3UTR CAA 72 bp | AGTTTCACTGTTGTTAAAGGCAAGAAGAACTGCCATTaGGTAGGTTGTAACCATAGCTACATATGGTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: SFTVVKGKKNCH*VGCNHSYIWFS Trigger: GGAAAACCATATGTAGCTATGGTTACAACCTACCAAATGGCAGTTCTTCTTGCCTTTAACAACAGTGAAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080089.11 |
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| 3UTR CAA 72 bp | GTATTCTTCCCAGTACCTATGATACATAACAAGCACTaGTTCTTCAGACTCCAGAACTCTTATACAAATGCC | + |
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Preference number: 4 (lower is better) Translates to: VFFPVPMIHNKH*FFRLQNSYTNA Trigger: GGCATTTGTATAAGAGTTCTGGAGTCTGAAGAACAAGTGCTTGTTATGTATCATAGGTACTGGGAAGAATAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234843.2 |
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| CDS-3UTR TCA 90 bp | CTGCTTATGCCATTAGCTCAAATTCACAATCTTATGTATTCAAAGACAGAACCCTCTTCCCAGTACCTATaGTACATAACAAGCACTTGT | + |
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Preference number: 4 (lower is better) Translates to: LLMPLAQIHNLMYSKTEPSSQYL*YITSTC Trigger: ACAAGTGCTTGTTATGTATCATAGGTACTGGGAAGA...GGGTTCTGTCTTTGAATACATAAGATTGTGAATTTGAGCTAATGGCATAAGCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| CDS-3UTR GCA 90 bp | CTGCTTATGCCATTAGCTCAAATTCACAATCTTATGTATTCAAAGACAGAACCCTCTGTATACATTCGATaGAGCTTGCTGGTAAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLMPLAQIHNLMYSKTEPSVYIR*SLLVNS Trigger: TGAGTTTACCAGCAAGCTGCATCGAATGTATACAGA...GGGTTCTGTCTTTGAATACATAAGATTGTGAATTTGAGCTAATGGCATAAGCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| CDS-3UTR TCA 90 bp | TCATATCTACTCCACCATAGCCATACTGTATATCAGCTTCTGTCAATTTATTCTTCTTCCCAGTACCTATaGTACATAACAAGCACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SYLLHHSHTVYQLLSIYSSSQYL*YITSTC Trigger: ACAAGTGCTTGTTATGTATCATAGGTACTGGGAAGA...AGAATAAATTGACAGAAGCTGATATACAGTATGGCTATGGTGGAGTAGATATGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234414.2 |
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| CDS-3UTR CAA 90 bp | GGTGCCAGCGATGAGCAGGGGGAGCTGGAAGGAATTCACTGTACTCATAGTCTCAGCAGTTCAGGCGCTTaGCAAACAGACTTGGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GASDEQGELEGIHCTHSLSSSGA*QTDLGS Trigger: AGAACCCAAGTCTGTTTGCAAAGCGCCTGAACTGCT...GAGACTATGAGTACAGTGAATTCCTTCCAGCTCCCCCTGCTCATCGCTGGCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| CDS-3UTR CAA 90 bp | ACAGGCCTGCTTTCTCCCACAGGAGCTCACCAAATGGGGATGGCAATGACCTCAATGCTGATACTGGGATaGAACCTGGCTCTTGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: TGLLSPTGAHQMGMAMTSMLILG*NLALDW Trigger: CCAGTCAAGAGCCAGGTTCAATCCCAGTATCAGCAT...TGAGGTCATTGCCATCCCCATTTGGTGAGCTCCTGTGGGAGAAAGCAGGCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| CDS-3UTR CAA 90 bp | AAAGTATGGAGGCACAGGCCTGCTTTCTCCCACAGGAGCTCACCAAATGGGGATAGCGGTCATTCCATGTaGCTCGCTCGACATATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KVWRHRPAFSHRSSPNGDSGHSM*LARHIP Trigger: TGGAATATGTCGAGCGAGCAACATGGAATGACCGCT...ATCCCCATTTGGTGAGCTCCTGTGGGAGAAAGCAGGCCTGTGCCTCCATACTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025073.12 ENSMUST00000080089.11 ENSMUST00000162301.8 |
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| CDS-3UTR CAA 90 bp | ACAGGCCTGCTTTCTCCCACAGGAGCTCACCAAATGGGGATGGCAATGACCTCAGCGGACAATAGCAGCTaGAAGATACATTTTCCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: TGLLSPTGAHQMGMAMTSADNSS*KIHFPV Trigger: GACCGGAAAATGTATCTTCAAGCTGCTATTGTCCGC...TGAGGTCATTGCCATCCCCATTTGGTGAGCTCCTGTGGGAGAAAGCAGGCCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162301.8 |
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| CDS-3UTR CAA 90 bp | ACAGGCCTGCTTTCTCCCACAGGAGCTCACCAAATGGGGATGGCAATGACCTCAGGATTACTTTCTGGTTaGGATCTTCACCACCACGAT | + |
|
Preference number: 5 (lower is better) Translates to: TGLLSPTGAHQMGMAMTSGLLSG*DLHHHD Trigger: ATCGTGGTGGTGAAGATCCAAACCAGAAAGTAATCC...TGAGGTCATTGCCATCCCCATTTGGTGAGCTCCTGTGGGAGAAAGCAGGCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| CDS-3UTR CAA 90 bp | CTGTGGAAGGGTGCCAGCGATGAGCAGGGGGAGCTGGAAGGAATTCACTGTACTGTAAGACGTACATATTaGCCATGTCGTTCTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LWKGASDEQGELEGIHCTVRRTY*PCRSSS Trigger: AGAGGAAGAACGACATGGCAAATATGTACGTCTTAC...AGTACAGTGAATTCCTTCCAGCTCCCCCTGCTCATCGCTGGCACCCTTCCACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| CDS-3UTR CAA 90 bp | CTGTGGAAGGGTGCCAGCGATGAGCAGGGGGAGCTGGAAGGAATTCACTGTACTAAGAAGAACTGCCATTaGGTAGGTTGTAACCATAGC | + |
|
Preference number: 5 (lower is better) Translates to: LWKGASDEQGELEGIHCTKKNCH*VGCNHS Trigger: GCTATGGTTACAACCTACCAAATGGCAGTTCTTCTT...AGTACAGTGAATTCCTTCCAGCTCCCCCTGCTCATCGCTGGCACCCTTCCACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| CDS-3UTR CAA 90 bp | ACAGGCCTGCTTTCTCCCACAGGAGCTCACCAAATGGGGATGGCAATGACCTCAGTAAGACGTACATATTaGCCATGTCGTTCTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TGLLSPTGAHQMGMAMTSVRRTY*PCRSSS Trigger: AGAGGAAGAACGACATGGCAAATATGTACGTCTTAC...TGAGGTCATTGCCATCCCCATTTGGTGAGCTCCTGTGGGAGAAAGCAGGCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| CDS-3UTR CAA 90 bp | AAAGTATGGAGGCACAGGCCTGCTTTCTCCCACAGGAGCTCACCAAATGGGGATCATCTGGGTACTGTCTaGAAGTTCTTTGTAGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: KVWRHRPAFSHRSSPNGDHLGTV*KFFVAD Trigger: GTCAGCTACAAAGAACTTCAAGACAGTACCCAGATG...ATCCCCATTTGGTGAGCTCCTGTGGGAGAAAGCAGGCCTGTGCCTCCATACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| CDS-3UTR CAA 90 bp | ACAGGCCTGCTTTCTCCCACAGGAGCTCACCAAATGGGGATGGCAATGACCTCACGTGAATTAGACGTTTaGCTAGCATTCTTGCATAGA | + |
|
Preference number: 5 (lower is better) Translates to: TGLLSPTGAHQMGMAMTSRELDV*LAFLHR Trigger: TCTATGCAAGAATGCTAGCAAAACGTCTAATTCACG...TGAGGTCATTGCCATCCCCATTTGGTGAGCTCCTGTGGGAGAAAGCAGGCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| CDS-3UTR CAA 90 bp | GGTGCCAGCGATGAGCAGGGGGAGCTGGAAGGAATTCACTGTACTCATAGTCTCGTCAATCACGGTGTCTaGGTTTCTGATGAAATTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GASDEQGELEGIHCTHSLVNHGV*VSDEIV Trigger: AACAATTTCATCAGAAACCAAGACACCGTGATTGAC...GAGACTATGAGTACAGTGAATTCCTTCCAGCTCCCCCTGCTCATCGCTGGCACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| CDS-3UTR CAA 90 bp | AAAGTATGGAGGCACAGGCCTGCTTTCTCCCACAGGAGCTCACCAAATGGGGATAAGAAGAACTGCCATTaGGTAGGTTGTAACCATAGC | + |
|
Preference number: 5 (lower is better) Translates to: KVWRHRPAFSHRSSPNGDKKNCH*VGCNHS Trigger: GCTATGGTTACAACCTACCAAATGGCAGTTCTTCTT...ATCCCCATTTGGTGAGCTCCTGTGGGAGAAAGCAGGCCTGTGCCTCCATACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| CDS-3UTR CAA 90 bp | ACAGGCCTGCTTTCTCCCACAGGAGCTCACCAAATGGGGATGGCAATGACCTCACTGAAGAACATATATTaGGAAACTAATCCCCAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: TGLLSPTGAHQMGMAMTSLKNIY*ETNPQV Trigger: GACTTGGGGATTAGTTTCCAAATATATGTTCTTCAG...TGAGGTCATTGCCATCCCCATTTGGTGAGCTCCTGTGGGAGAAAGCAGGCCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| CDS-3UTR CAA 90 bp | ACAGGCCTGCTTTCTCCCACAGGAGCTCACCAAATGGGGATGGCAATGACCTCAACATCAAGTAATGATTaGATTGTTTTGGTCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TGLLSPTGAHQMGMAMTSTSSND*IVLVSS Trigger: GGAGCTGACCAAAACAATCAAATCATTACTTGATGT...TGAGGTCATTGCCATCCCCATTTGGTGAGCTCCTGTGGGAGAAAGCAGGCCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| CDS-3UTR CAA 90 bp | GTGACTCATAGGCATTTACAGATGTCTCATTTTCTGTCCAACCTGATATTCCGTAGCAGTTCAGGCGCTTaGCAAACAGACTTGGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VTHRHLQMSHFLSNLIFRSSSGA*QTDLGS Trigger: AGAACCCAAGTCTGTTTGCAAAGCGCCTGAACTGCT...ACGGAATATCAGGTTGGACAGAAAATGAGACATCTGTAAATGCCTATGAGTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| CDS-3UTR CAA 90 bp | CATGAAGAATGGGTCAAGAGTGAGCAGTTCTTTTCTGCCAGCCTAGAAGTCACTATGAAGCTAGTGAGCTaGTCCTCCACTTCATTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: HEEWVKSEQFFSASLEVTMKLVS*SSTSFS Trigger: TGAAAATGAAGTGGAGGACAAGCTCACTAGCTTCAT...AGTGACTTCTAGGCTGGCAGAAAAGAACTGCTCACTCTTGACCCATTCTTCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| CDS-3UTR CAA 90 bp | GTTCATTCATATCTACTCCACCATAGCCATACTGTATATCAGCTTCTGTCAATTAGCGGTCATTCCATGTaGCTCGCTCGACATATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VHSYLLHHSHTVYQLLSISGHSM*LARHIP Trigger: TGGAATATGTCGAGCGAGCAACATGGAATGACCGCT...AATTGACAGAAGCTGATATACAGTATGGCTATGGTGGAGTAGATATGAATGAAC 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080089.11 ENSMUST00000234414.2 ENSMUST00000234843.2 |
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| CDS-3UTR CAA 90 bp | TTTGCTGTATTCTTCCCAGTACCTATGATACATAACAAGCACTTGTTCTTCAGAAGCGGTCATTCCATGTaGCTCGCTCGACATATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: FAVFFPVPMIHNKHLFFRSGHSM*LARHIP Trigger: TGGAATATGTCGAGCGAGCAACATGGAATGACCGCT...TCTGAAGAACAAGTGCTTGTTATGTATCATAGGTACTGGGAAGAATACAGCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234843.2 |
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| CDS-3UTR CAA 90 bp | TCATATCTACTCCACCATAGCCATACTGTATATCAGCTTCTGTCAATTTATTCTAGCGGTCATTCCATGTaGCTCGCTCGACATATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SYLLHHSHTVYQLLSIYSSGHSM*LARHIP Trigger: TGGAATATGTCGAGCGAGCAACATGGAATGACCGCT...AGAATAAATTGACAGAAGCTGATATACAGTATGGCTATGGTGGAGTAGATATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080089.11 ENSMUST00000234414.2 ENSMUST00000234843.2 |
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| CDS-3UTR CAA 90 bp | GTGACTCATAGGCATTTACAGATGTCTCATTTTCTGTCCAACCTGATATTCCGTATGAAGCTAGTGAGCTaGTCCTCCACTTCATTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: VTHRHLQMSHFLSNLIFRMKLVS*SSTSFS Trigger: TGAAAATGAAGTGGAGGACAAGCTCACTAGCTTCAT...ACGGAATATCAGGTTGGACAGAAAATGAGACATCTGTAAATGCCTATGAGTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| CDS-3UTR CAA 90 bp | CTGCTTATGCCATTAGCTCAAATTCACAATCTTATGTATTCAAAGACAGAACCCCATCTGGGTACTGTCTaGAAGTTCTTTGTAGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LLMPLAQIHNLMYSKTEPHLGTV*KFFVAD Trigger: GTCAGCTACAAAGAACTTCAAGACAGTACCCAGATG...GGGTTCTGTCTTTGAATACATAAGATTGTGAATTTGAGCTAATGGCATAAGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| CDS-3UTR CAA 90 bp | GGTTTAAAACAGCAATGTGATCTAGAGATGGCAGATGGAGAATATAGTAACCAGATACATAACAAGCACTaGTTCTTCAGACTCCAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: GLKQQCDLEMADGEYSNQIHNKH*FFRLQN Trigger: GTTCTGGAGTCTGAAGAACAAGTGCTTGTTATGTAT...CTGGTTACTATATTCTCCATCTGCCATCTCTAGATCACATTGCTGTTTTAAACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| CDS-3UTR CAA 90 bp | GGTTTAAAACAGCAATGTGATCTAGAGATGGCAGATGGAGAATATAGTAACCAGGTCAATCACGGTGTCTaGGTTTCTGATGAAATTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GLKQQCDLEMADGEYSNQVNHGV*VSDEIV Trigger: AACAATTTCATCAGAAACCAAGACACCGTGATTGAC...CTGGTTACTATATTCTCCATCTGCCATCTCTAGATCACATTGCTGTTTTAAACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| CDS-3UTR CAA 90 bp | GTGACTCATAGGCATTTACAGATGTCTCATTTTCTGTCCAACCTGATATTCCGTCTGAAGAACATATATTaGGAAACTAATCCCCAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: VTHRHLQMSHFLSNLIFRLKNIY*ETNPQV Trigger: GACTTGGGGATTAGTTTCCAAATATATGTTCTTCAG...ACGGAATATCAGGTTGGACAGAAAATGAGACATCTGTAAATGCCTATGAGTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| CDS-3UTR CAA 90 bp | CTGCTTATGCCATTAGCTCAAATTCACAATCTTATGTATTCAAAGACAGAACCCCGTGAATTAGACGTTTaGCTAGCATTCTTGCATAGA | + |
|
Preference number: 5 (lower is better) Translates to: LLMPLAQIHNLMYSKTEPRELDV*LAFLHR Trigger: TCTATGCAAGAATGCTAGCAAAACGTCTAATTCACG...GGGTTCTGTCTTTGAATACATAAGATTGTGAATTTGAGCTAATGGCATAAGCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| CDS-3UTR CAA 90 bp | GGTTTAAAACAGCAATGTGATCTAGAGATGGCAGATGGAGAATATAGTAACCAGACATCAAGTAATGATTaGATTGTTTTGGTCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GLKQQCDLEMADGEYSNQTSSND*IVLVSS Trigger: GGAGCTGACCAAAACAATCAAATCATTACTTGATGT...CTGGTTACTATATTCTCCATCTGCCATCTCTAGATCACATTGCTGTTTTAAACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025073.12 ENSMUST00000162301.8 |
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| CDS CAA 72 bp | ACTTCTATGCACTTCTTAATCATGCTGATACTGGGATaGAACCTGGCTCTTGACTGGCTGATTACTTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: TSMHFLIMLILG*NLALDWLITCG Trigger: GCCACAAGTAATCAGCCAGTCAAGAGCCAGGTTCAATCCCAGTATCAGCATGATTAAGAAGTGCATAGAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025073.12 |
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| CDS GCA 72 bp | GCTCTTGACTGGCTGATTACTTGTGGCGTATCCTTCTaGATTGACGTAGTAATCTTAAATTTTGTTCTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: ALDWLITCGVSF*IDVVILNFVLL Trigger: TAAGAGAACAAAATTTAAGATTACTACGTCAATGCAGAAGGATACGCCACAAGTAATCAGCCAGTCAAGAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025073.12 |
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