Pregenerated sensors for CST13 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000036924

Ensembl transcript IDs: ENSMUST00000046589.4

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	CTTTCATGGCATACCAGAGTGCATGCTGCACATAGACATAGGATTTaGGGATGTCTTCGAATGGCCTCACAATCTGTGGGGAGCCCCAGG	+
Preference number: 5 (lower is better) Translates to: LSWHTRVHAAHRHRI*GCLRMASQSVGSPR Trigger: CCTGGGGCTCCCCACAGATTGTGAGGCCATTCGAAGACATCCCCAAATCCTATGTCTATGTGCAGCATGCACTCTGGTATGCCATGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046589.4
CDS CCA 90 bp	ATAGACATAGGATTTGGGGATGTCTTCGAATGGCCTCACAATCTGTaGGGAGCCCCAGGCTTCGACTCTTCTAGATACAAACTCCACCAT	+
Preference number: 5 (lower is better) Translates to: IDIGFGDVFEWPHNL*GAPGFDSSRYKLHH Trigger: ATGGTGGAGTTTGTATCTAGAAGAGTCGAAGCCTGGGGCTCCCCACAGATTGTGAGGCCATTCGAAGACATCCCCAAATCCTATGTCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046589.4
CDS GCA 90 bp	GAGGTCATTGCTGGCCTTGTTATATTCTTTCATGGCATACCAGAGTaGATGCTGCACATAGACATAGGATTTGGGGATGTCTTCGAATGG	+
Preference number: 5 (lower is better) Translates to: EVIAGLVIFFHGIPE*MLHIDIGFGDVFEW Trigger: CCATTCGAAGACATCCCCAAATCCTATGTCTATGTGCAGCATGCACTCTGGTATGCCATGAAAGAATATAACAAGGCCAGCAATGACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046589.4
CDS GCA 90 bp	TTTCATTTTAGGATCCTGTTGAAACAAGCAGTTTTCATTATCTCCTaGAATCTTCTTGCACATTGTTCGGGCAATGTTTACTTCAAGATA	+
Preference number: 5 (lower is better) Translates to: FHFRILLKQAVFIIS*NLLAHCSGNVYFKI Trigger: TATCTTGAAGTAAACATTGCCCGAACAATGTGCAAGAAGATTGCAGGAGATAATGAAAACTGCTTGTTTCAACAGGATCCTAAAATGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046589.4
CDS CCA 72 bp	CATACCAGAGTGCATGCTGCACATAGACATAGGATTTaGGGATGTCTTCGAATGGCCTCACAATCTGTGGGG	+
Preference number: 6 (lower is better) Translates to: HTRVHAAHRHRI*GCLRMASQSVG Trigger: CCCCACAGATTGTGAGGCCATTCGAAGACATCCCCAAATCCTATGTCTATGTGCAGCATGCACTCTGGTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046589.4
CDS GCA 72 bp	GCTGGCCTTGTTATATTCTTTCATGGCATACCAGAGTaGATGCTGCACATAGACATAGGATTTGGGGATGTC	+
Preference number: 6 (lower is better) Translates to: AGLVIFFHGIPE*MLHIDIGFGDV Trigger: GACATCCCCAAATCCTATGTCTATGTGCAGCATGCACTCTGGTATGCCATGAAAGAATATAACAAGGCCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046589.4
CDS CCA 72 bp	TGTAGAGGTCATTGCTGGCCTTGTTATATTCTTTCATaGCATACCAGAGTGCATGCTGCACATAGACATAGG	+
Preference number: 6 (lower is better) Translates to: CRGHCWPCYILS*HTRVHAAHRHR Trigger: CCTATGTCTATGTGCAGCATGCACTCTGGTATGCCATGAAAGAATATAACAAGGCCAGCAATGACCTCTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046589.4

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