Pregenerated sensors for CRMP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029121Ensembl transcript IDs: ENSMUST00000031004.11, ENSMUST00000114158.9, ENSMUST00000202434.4
Found 162 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTGGGGTCACTAGGAAGGGAAAACGGAGGCACCATGCTCTGAGGTaGAGTCGGTGTGAACACACACTGTGGGCGAGGGACTTCCAGGCA | + |
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Preference number: 1 (lower is better) Translates to: PGVTRKGKRRHHALR*SRCEHTLWARDFQA Trigger: TGCCTGGAAGTCCCTCGCCCACAGTGTGTGTTCACACCGACTCCACCTCAGAGCATGGTGCCTCCGTTTTCCCTTCCTAGTGACCCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| 3UTR TCA 90 bp | CTAAACCTGGGGTCACTAGGAAGGGAAAACGGAGGCACCATGCTCTaGGGTGGAGTCGGTGTGAACACACACTGTGGGCGAGGGACTTCC | + |
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Preference number: 1 (lower is better) Translates to: LNLGSLGRENGGTML*GGVGVNTHCGRGTS Trigger: GGAAGTCCCTCGCCCACAGTGTGTGTTCACACCGACTCCACCTCAGAGCATGGTGCCTCCGTTTTCCCTTCCTAGTGACCCCAGGTTTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| 3UTR GCA 90 bp | CTGGAAGAACACACAGACCAGAAAGACACTATGGCCAGTTACAGGTaGCACAGGGACCGGGTTGTTGACACAGGACATGGGTGGTGGAGC | + |
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Preference number: 1 (lower is better) Translates to: LEEHTDQKDTMASYR*HRDRVVDTGHGWWS Trigger: GCTCCACCACCCATGTCCTGTGTCAACAACCCGGTCCCTGTGGCACCTGTAACTGGCCATAGTGTCTTTCTGGTCTGTGTGTTCTTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| 3UTR CCA 90 bp | TTCCCTGCCACTCTGCATCTTCACAGGTCTCAGTCAGGGTGGGGATaGGGACCACATCTTTCTAGTGAAGACTCATGGGAGCCTTCATTT | + |
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Preference number: 1 (lower is better) Translates to: FPATLHLHRSQSGWG*GPHLSSEDSWEPSF Trigger: AAATGAAGGCTCCCATGAGTCTTCACTAGAAAGATGTGGTCCCCATCCCCACCCTGACTGAGACCTGTGAAGATGCAGAGTGGCAGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| 3UTR-3UTR TCA 90 bp | ACCGCACCGTCCTCAAGGCCTGGGTGGGGTGTCAGGACACCCCTTTCTGGGTGTGGTGGTGGAGCTCTGTaGCCTTCCCTGCCACTCTGC | + |
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Preference number: 2 (lower is better) Translates to: TAPSSRPGWGVRTPLSGCGGGAL*PSLPLC Trigger: GCAGAGTGGCAGGGAAGGTCACAGAGCTCCACCACC...ACACCCAGAAAGGGGTGTCCTGACACCCCACCCAGGCCTTGAGGACGGTGCGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| 3UTR-3UTR TCA 90 bp | AAAAATCTGACTGCCCTGCTCGAACTCCTCAGAGGGTCAGAGACTCAGGCAGCCGGTGGTGGAGCTCTGTaGCCTTCCCTGCCACTCTGC | + |
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Preference number: 2 (lower is better) Translates to: KNLTALLELLRGSETQAAGGGAL*PSLPLC Trigger: GCAGAGTGGCAGGGAAGGTCACAGAGCTCCACCACC...GGCTGCCTGAGTCTCTGACCCTCTGAGGAGTTCGAGCAGGGCAGTCAGATTTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| 3UTR-3UTR CCA 90 bp | CTCGAACTCCTCAGAGGGTCAGAGACTCAGGCAGCCTGGGCAGTCATTACCGCAAGGTCTCAGTCAGGGTaGGGATGGGGACCACATCTT | + |
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Preference number: 2 (lower is better) Translates to: LELLRGSETQAAWAVITARSQSG*GWGPHL Trigger: AAGATGTGGTCCCCATCCCCACCCTGACTGAGACCT...TGCGGTAATGACTGCCCAGGCTGCCTGAGTCTCTGACCCTCTGAGGAGTTCGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| 3UTR-3UTR TCA 90 bp | AGTCAGGGTGGGGATGGGGACCACATCTTTCTAGTGAAGACTCATGGGAGCCTTGGAGGCACCATGCTCTaGGGTGGAGTCGGTGTGAAC | + |
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Preference number: 2 (lower is better) Translates to: SQGGDGDHIFLVKTHGSLGGTML*GGVGVN Trigger: GTTCACACCGACTCCACCTCAGAGCATGGTGCCTCC...AAGGCTCCCATGAGTCTTCACTAGAAAGATGTGGTCCCCATCCCCACCCTGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| 3UTR-3UTR GCA 90 bp | GCCACTCTGCATCTTCACAGGTCTCAGTCAGGGTGGGGATGGGGACCACATCTTAAAACGGAGGCACCATaGTCTGAGGTGGAGTCGGTG | + |
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Preference number: 2 (lower is better) Translates to: ATLHLHRSQSGWGWGPHLKTEAP*SEVESV Trigger: CACCGACTCCACCTCAGAGCATGGTGCCTCCGTTTT...AAGATGTGGTCCCCATCCCCACCCTGACTGAGACCTGTGAAGATGCAGAGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| 3UTR-3UTR GCA 90 bp | TGGCCAGTTACAGGTGCCACAGGGACCGGGTTGTTGACACAGGACATGGGTGGTCTCTGTGACCTTCCCTaGCACTCTGCATCTTCACAG | + |
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Preference number: 2 (lower is better) Translates to: WPVTGATGTGLLTQDMGGLCDLP*HSASSQ Trigger: CTGTGAAGATGCAGAGTGGCAGGGAAGGTCACAGAG...ACCACCCATGTCCTGTGTCAACAACCCGGTCCCTGTGGCACCTGTAACTGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| 3UTR-3UTR CCA 90 bp | ATGGCCAGTTACAGGTGCCACAGGGACCGGGTTGTTGACACAGGACATGGGTGGAGGGTCATGGAGGAGTaGAGGGAACAGTATAGGACG | + |
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Preference number: 2 (lower is better) Translates to: MASYRCHRDRVVDTGHGWRVMEE*REQYRT Trigger: CGTCCTATACTGTTCCCTCCACTCCTCCATGACCCT...CCACCCATGTCCTGTGTCAACAACCCGGTCCCTGTGGCACCTGTAACTGGCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| 3UTR-3UTR CCA 90 bp | AGTTACAGGTGCCACAGGGACCGGGTTGTTGACACAGGACATGGGTGGTGGAGCAGGGTCATGGAGGAGTaGAGGGAACAGTATAGGACG | + |
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Preference number: 2 (lower is better) Translates to: SYRCHRDRVVDTGHGWWSRVMEE*REQYRT Trigger: CGTCCTATACTGTTCCCTCCACTCCTCCATGACCCT...GCTCCACCACCCATGTCCTGTGTCAACAACCCGGTCCCTGTGGCACCTGTAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| 3UTR-3UTR CCA 90 bp | AGTTACAGGTGCCACAGGGACCGGGTTGTTGACACAGGACATGGGTGGTGGAGCTCACTCAGAGGGTCATaGAGGAGTGGAGGGAACAGT | + |
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Preference number: 2 (lower is better) Translates to: SYRCHRDRVVDTGHGWWSSLRGS*RSGGNS Trigger: ACTGTTCCCTCCACTCCTCCATGACCCTCTGAGTGA...GCTCCACCACCCATGTCCTGTGTCAACAACCCGGTCCCTGTGGCACCTGTAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| 3UTR-3UTR CCA 90 bp | ACAGGGCGCAAAAGAACCATCACTCAGAGGGTCATGGAGGAGTGGAGGGAACAGTGTGAACACACACTGTaGGCGAGGGACTTCCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: TGRKRTITQRVMEEWREQCEHTL*ARDFQA Trigger: TGCCTGGAAGTCCCTCGCCCACAGTGTGTGTTCACA...CTGTTCCCTCCACTCCTCCATGACCCTCTGAGTGATGGTTCTTTTGCGCCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| 3UTR-3UTR GCA 90 bp | ATCACTCAGAGGGTCATGGAGGAGTGGAGGGAACAGTATAGGACGATGCTAAACAAAACGGAGGCACCATaGTCTGAGGTGGAGTCGGTG | + |
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Preference number: 2 (lower is better) Translates to: ITQRVMEEWREQYRTMLNKTEAP*SEVESV Trigger: CACCGACTCCACCTCAGAGCATGGTGCCTCCGTTTT...GTTTAGCATCGTCCTATACTGTTCCCTCCACTCCTCCATGACCCTCTGAGTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| 3UTR-3UTR GCA 90 bp | ACAGGTCTCAGTCAGGGTGGGGATGGGGACCACATCTTTCTAGTGAAGACTCATGCGCGCGCTCAGACTTaGATACGTAACTTACTAACA | + |
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Preference number: 2 (lower is better) Translates to: TGLSQGGDGDHIFLVKTHARAQT*IRNLLT Trigger: TGTTAGTAAGTTACGTATGCAAGTCTGAGCGCGCGC...ATGAGTCTTCACTAGAAAGATGTGGTCCCCATCCCCACCCTGACTGAGACCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| 3UTR-3UTR CCA 90 bp | ATGGCCAGTTACAGGTGCCACAGGGACCGGGTTGTTGACACAGGACATGGGTGGTCTAGTGAAGACTCATaGGAGCCTTCATTTTTAAGA | + |
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Preference number: 2 (lower is better) Translates to: MASYRCHRDRVVDTGHGWSSEDS*EPSFLR Trigger: TCTTAAAAATGAAGGCTCCCATGAGTCTTCACTAGA...CCACCCATGTCCTGTGTCAACAACCCGGTCCCTGTGGCACCTGTAACTGGCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| 3UTR-3UTR GCA 90 bp | AGGAAAGAGCATCGCTCAATCTCCCCTCCGTCAGTACCAACTAAAACTGTGGGCATAATCCTTCACTCTTaGATATCTGGCTCATCTGAG | + |
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Preference number: 2 (lower is better) Translates to: RKEHRSISPPSVPTKTVGIILHS*ISGSSE Trigger: CTCAGATGAGCCAGATATGCAAGAGTGAAGGATTAT...GCCCACAGTTTTAGTTGGTACTGACGGAGGGGAGATTGAGCGATGCTCTTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| 3UTR-3UTR CCA 90 bp | AGGGTCATGGAGGAGTGGAGGGAACAGTATAGGACGATGCTAAACCTGGGGTCATACCAACTAAAACTGTaGGCTTCAAAAACACGGAAA | + |
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Preference number: 2 (lower is better) Translates to: RVMEEWREQYRTMLNLGSYQLKL*ASKTRK Trigger: TTTCCGTGTTTTTGAAGCCCACAGTTTTAGTTGGTA...TGACCCCAGGTTTAGCATCGTCCTATACTGTTCCCTCCACTCCTCCATGACCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| 3UTR-3UTR GCA 90 bp | ATCACTCAGAGGGTCATGGAGGAGTGGAGGGAACAGTATAGGACGATGCTAAACATAATCCTTCACTCTTaGATATCTGGCTCATCTGAG | + |
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Preference number: 2 (lower is better) Translates to: ITQRVMEEWREQYRTMLNIILHS*ISGSSE Trigger: CTCAGATGAGCCAGATATGCAAGAGTGAAGGATTAT...GTTTAGCATCGTCCTATACTGTTCCCTCCACTCCTCCATGACCCTCTGAGTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| 3UTR-3UTR CAA 90 bp | ACCGCACCGTCCTCAAGGCCTGGGTGGGGTGTCAGGACACCCCTTTCTGGGTGTGCCACAGGGACCGGGTaGTTGACACAGGACATGGGT | + |
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Preference number: 3 (lower is better) Translates to: TAPSSRPGWGVRTPLSGCATGTG*LTQDMG Trigger: ACCCATGTCCTGTGTCAACAACCCGGTCCCTGTGGC...ACACCCAGAAAGGGGTGTCCTGACACCCCACCCAGGCCTTGAGGACGGTGCGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| 3UTR CCA 72 bp | TGGGCAGTCATTACCGCACCGTCCTCAAGGCCTGGGTaGGGTGTCAGGACACCCCTTTCTGGGTGTGAGCCT | + |
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Preference number: 3 (lower is better) Translates to: WAVITAPSSRPG*GVRTPLSGCEP Trigger: AGGCTCACACCCAGAAAGGGGTGTCCTGACACCCCACCCAGGCCTTGAGGACGGTGCGGTAATGACTGCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| 3UTR CCA 72 bp | CTCGAACTCCTCAGAGGGTCAGAGACTCAGGCAGCCTaGGCAGTCATTACCGCACCGTCCTCAAGGCCTGGG | + |
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Preference number: 3 (lower is better) Translates to: LELLRGSETQAA*AVITAPSSRPG Trigger: CCCAGGCCTTGAGGACGGTGCGGTAATGACTGCCCAGGCTGCCTGAGTCTCTGACCCTCTGAGGAGTTCGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| 3UTR CCA 72 bp | TGCCACAGGGACCGGGTTGTTGACACAGGACATGGGTaGTGGAGCTCTGTGACCTTCCCTGCCACTCTGCAT | + |
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Preference number: 3 (lower is better) Translates to: CHRDRVVDTGHG*WSSVTFPATLH Trigger: ATGCAGAGTGGCAGGGAAGGTCACAGAGCTCCACCACCCATGTCCTGTGTCAACAACCCGGTCCCTGTGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| 3UTR CCA 72 bp | CCTGCCACTCTGCATCTTCACAGGTCTCAGTCAGGGTaGGGATGGGGACCACATCTTTCTAGTGAAGACTCA | + |
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Preference number: 3 (lower is better) Translates to: PATLHLHRSQSG*GWGPHLSSEDS Trigger: TGAGTCTTCACTAGAAAGATGTGGTCCCCATCCCCACCCTGACTGAGACCTGTGAAGATGCAGAGTGGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| 3UTR CCA 72 bp | CGCAAAAGAACCATCACTCAGAGGGTCATGGAGGAGTaGAGGGAACAGTATAGGACGATGCTAAACCTGGGG | + |
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Preference number: 3 (lower is better) Translates to: RKRTITQRVMEE*REQYRTMLNLG Trigger: CCCCAGGTTTAGCATCGTCCTATACTGTTCCCTCCACTCCTCCATGACCCTCTGAGTGATGGTTCTTTTGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| 3UTR CCA 72 bp | ACTCTGCATCTTCACAGGTCTCAGTCAGGGTGGGGATaGGGACCACATCTTTCTAGTGAAGACTCATGGGAG | + |
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Preference number: 3 (lower is better) Translates to: TLHLHRSQSGWG*GPHLSSEDSWE Trigger: CTCCCATGAGTCTTCACTAGAAAGATGTGGTCCCCATCCCCACCCTGACTGAGACCTGTGAAGATGCAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| CDS-3UTR CCA 90 bp | CCAGTTACAGGTGCCACAGGGACCGGGTTGTTGACACAGGACATGGGTGGTGGAATGCCGCCGTACTTCTaGCGCGGGGTCTGCGCCGCG | + |
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Preference number: 4 (lower is better) Translates to: PVTGATGTGLLTQDMGGGMPPYF*RGVCAA Trigger: CGCGGCGCAGACCCCGCGCCAGAAGTACGGCGGCAT...TCCACCACCCATGTCCTGTGTCAACAACCCGGTCCCTGTGGCACCTGTAACTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114158.9 |
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| CDS-3UTR GCA 90 bp | ACCGCACCGTCCTCAAGGCCTGGGTGGGGTGTCAGGACACCCCTTTCTGGGTGTCATCAGCCGAGGTCATaGCCTGGGAGGGCTTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: TAPSSRPGWGVRTPLSGCHQPRS*PGRASA Trigger: TGCAGAAGCCCTCCCAGGGCATGACCTCGGCTGATG...ACACCCAGAAAGGGGTGTCCTGACACCCCACCCAGGCCTTGAGGACGGTGCGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| CDS-3UTR TCA 90 bp | TGGCCAGTTACAGGTGCCACAGGGACCGGGTTGTTGACACAGGACATGGGTGGTGACCCTCGGGACCCGTaGTGCCCATCTCCAGGATCC | + |
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Preference number: 4 (lower is better) Translates to: WPVTGATGTGLLTQDMGGDPRDP*CPSPGS Trigger: GGATCCTGGAGATGGGCATCACGGGTCCCGAGGGTC...ACCACCCATGTCCTGTGTCAACAACCCGGTCCCTGTGGCACCTGTAACTGGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| CDS-3UTR TCA 90 bp | AGTTACAGGTGCCACAGGGACCGGGTTGTTGACACAGGACATGGGTGGTGGAGCGGTCTGCTCAGAGCATaGCCCTCGGGACCCGTGATG | + |
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Preference number: 4 (lower is better) Translates to: SYRCHRDRVVDTGHGWWSGLLRA*PSGPVM Trigger: CATCACGGGTCCCGAGGGTCATGCTCTGAGCAGACC...GCTCCACCACCCATGTCCTGTGTCAACAACCCGGTCCCTGTGGCACCTGTAACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| CDS-3UTR TCA 90 bp | ATGGCCAGTTACAGGTGCCACAGGGACCGGGTTGTTGACACAGGACATGGGTGGATGGCTTCCGAGGGATaGAGCGGCCCATGCCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: MASYRCHRDRVVDTGHGWMASEG*SGPCPC Trigger: GCAAGGGCATGGGCCGCTTCATCCCTCGGAAGCCAT...CCACCCATGTCCTGTGTCAACAACCCGGTCCCTGTGGCACCTGTAACTGGCCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| CDS-3UTR CCA 90 bp | ACCGCACCGTCCTCAAGGCCTGGGTGGGGTGTCAGGACACCCCTTTCTGGGTGTCGGATGGGTGGGGGTTaGTGTTTAGAAGGCGAGGAT | + |
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Preference number: 4 (lower is better) Translates to: TAPSSRPGWGVRTPLSGCRMGGG*CLEGED Trigger: ATCCTCGCCTTCTAAACACCAACCCCCACCCATCCG...ACACCCAGAAAGGGGTGTCCTGACACCCCACCCAGGCCTTGAGGACGGTGCGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| CDS-3UTR CCA 90 bp | AGTCAGGGTGGGGATGGGGACCACATCTTTCTAGTGAAGACTCATGGGAGCCTTATTGTCCCGGCCGAGTaGCAGGTCGCGGGGCGCAGG | + |
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Preference number: 4 (lower is better) Translates to: SQGGDGDHIFLVKTHGSLIVPAE*QVAGRR Trigger: CCTGCGCCCCGCGACCTGCCACTCGGCCGGGACAAT...AAGGCTCCCATGAGTCTTCACTAGAAAGATGTGGTCCCCATCCCCACCCTGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114158.9 |
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| CDS-3UTR TCA 90 bp | ACAGGGCGCAAAAGAACCATCACTCAGAGGGTCATGGAGGAGTGGAGGGAACAGGACCCTCGGGACCCGTaGTGCCCATCTCCAGGATCC | + |
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Preference number: 4 (lower is better) Translates to: TGRKRTITQRVMEEWREQDPRDP*CPSPGS Trigger: GGATCCTGGAGATGGGCATCACGGGTCCCGAGGGTC...CTGTTCCCTCCACTCCTCCATGACCCTCTGAGTGATGGTTCTTTTGCGCCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| CDS-3UTR TCA 90 bp | ATGGCCAGTTACAGGTGCCACAGGGACCGGGTTGTTGACACAGGACATGGGTGGTCCTGGCCAGTGCGATaGTGTCCGCTGCACTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: MASYRCHRDRVVDTGHGWSWPVR*CPLHSC Trigger: GCAAGAGTGCAGCGGACATCATCGCACTGGCCAGGA...CCACCCATGTCCTGTGTCAACAACCCGGTCCCTGTGGCACCTGTAACTGGCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| CDS-3UTR TCA 90 bp | TGGCCAGTTACAGGTGCCACAGGGACCGGGTTGTTGACACAGGACATGGGTGGTTCCTGGCCAGTGCGATaGTGTCCGCTGCACTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: WPVTGATGTGLLTQDMGGSWPVR*CPLHSC Trigger: GCAAGAGTGCAGCGGACATCATCGCACTGGCCAGGA...ACCACCCATGTCCTGTGTCAACAACCCGGTCCCTGTGGCACCTGTAACTGGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| CDS-3UTR TCA 90 bp | CAGGGCGCAAAAGAACCATCACTCAGAGGGTCATGGAGGAGTGGAGGGAACAGTGATCGCCTGGCGAACTaGCAGCAGAGCCCGAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: QGAKEPSLRGSWRSGGNSDRLAN*QQSPRA Trigger: AGCCCTCGGGCTCTGCTGTCAGTTCGCCAGGCGATC...ACTGTTCCCTCCACTCCTCCATGACCCTCTGAGTGATGGTTCTTTTGCGCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114158.9 |
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| CDS-3UTR GCA 90 bp | CCAGTTACAGGTGCCACAGGGACCGGGTTGTTGACACAGGACATGGGTGGTGGATGCTCCAGTAGTGGGTaGCATCGGTTCCCAGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: PVTGATGTGLLTQDMGGGCSSSG*HRFPGW Trigger: CCAGCCTGGGAACCGATGGCACCCACTACTGGAGCA...TCCACCACCCATGTCCTGTGTCAACAACCCGGTCCCTGTGGCACCTGTAACTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| CDS-3UTR CCA 90 bp | AGTTACAGGTGCCACAGGGACCGGGTTGTTGACACAGGACATGGGTGGTGGAGCGGCGCCACAATGCGGTaGCCTGTACGCCTTGGATTG | + |
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Preference number: 4 (lower is better) Translates to: SYRCHRDRVVDTGHGWWSGATMR*PVRLGL Trigger: CAATCCAAGGCGTACAGGCCACCGCATTGTGGCGCC...GCTCCACCACCCATGTCCTGTGTCAACAACCCGGTCCCTGTGGCACCTGTAACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| CDS-3UTR TCA 90 bp | CTGAGGTGGAGTCGGTGTGAACACACACTGTGGGCGAGGGACTTCCAGGCAAACAGTGGCCACTACCTGTaGCCTGCAAGTCTCCACAGG | + |
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Preference number: 4 (lower is better) Translates to: LRWSRCEHTLWARDFQANSGHYL*PASLHR Trigger: CCTGTGGAGACTTGCAGGTCACAGGTAGTGGCCACT...GTTTGCCTGGAAGTCCCTCGCCCACAGTGTGTGTTCACACCGACTCCACCTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| CDS-3UTR GCA 90 bp | AGGGTCATGGAGGAGTGGAGGGAACAGTATAGGACGATGCTAAACCTGGGGTCACAGGGGGCGCCACAATaGGGTGGCCTGTACGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: RVMEEWREQYRTMLNLGSQGAPQ*GGLYAL Trigger: CAAGGCGTACAGGCCACCGCATTGTGGCGCCCCCTG...TGACCCCAGGTTTAGCATCGTCCTATACTGTTCCCTCCACTCCTCCATGACCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| CDS-3UTR CCA 90 bp | ACCGCACCGTCCTCAAGGCCTGGGTGGGGTGTCAGGACACCCCTTTCTGGGTGTTGGCTGTCAGACATCTaGTACAGGTCCTTATACGCC | + |
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Preference number: 4 (lower is better) Translates to: TAPSSRPGWGVRTPLSGCWLSDI*YRSLYA Trigger: GGCGTATAAGGACCTGTACCAGATGTCTGACAGCCA...ACACCCAGAAAGGGGTGTCCTGACACCCCACCCAGGCCTTGAGGACGGTGCGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| CDS-3UTR TCA 90 bp | AGTTACAGGTGCCACAGGGACCGGGTTGTTGACACAGGACATGGGTGGTGGAGCTCCTCGGGTACAGGTTaGAGATCTTGGCTGCGTTGG | + |
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Preference number: 4 (lower is better) Translates to: SYRCHRDRVVDTGHGWWSSSGTG*RSWLRW Trigger: CCAACGCAGCCAAGATCTTCAACCTGTACCCGAGGA...GCTCCACCACCCATGTCCTGTGTCAACAACCCGGTCCCTGTGGCACCTGTAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| CDS-3UTR TCA 90 bp | CCAGTTACAGGTGCCACAGGGACCGGGTTGTTGACACAGGACATGGGTGGTGGATCCTCGGGTACAGGTTaGAGATCTTGGCTGCGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PVTGATGTGLLTQDMGGGSSGTG*RSWLRW Trigger: CCAACGCAGCCAAGATCTTCAACCTGTACCCGAGGA...TCCACCACCCATGTCCTGTGTCAACAACCCGGTCCCTGTGGCACCTGTAACTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR TCA 90 bp | TGGCCAGTTACAGGTGCCACAGGGACCGGGTTGTTGACACAGGACATGGGTGGTTATCTGGGTCCCAGATaGCTACGTCAGCATCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WPVTGATGTGLLTQDMGGYLGPR*LRQHRS Trigger: GCTCCGATGCTGACGTAGTCATCTGGGACCCAGATA...ACCACCCATGTCCTGTGTCAACAACCCGGTCCCTGTGGCACCTGTAACTGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR TCA 90 bp | CACAGGTCTCAGTCAGGGTGGGGATGGGGACCACATCTTTCTAGTGAAGACTCAATGGCTTCCGAGGGATaGAGCGGCCCATGCCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HRSQSGWGWGPHLSSEDSMASEG*SGPCPC Trigger: GCAAGGGCATGGGCCGCTTCATCCCTCGGAAGCCAT...TGAGTCTTCACTAGAAAGATGTGGTCCCCATCCCCACCCTGACTGAGACCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR TCA 90 bp | CATGCTCTGAGGTGGAGTCGGTGTGAACACACACTGTGGGCGAGGGACTTCCAGGGGCACCTGATAAGCTaGAGTTGGACTGGTGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HALRWSRCEHTLWARDFQGHLIS*SWTGGG Trigger: ACCTCCACCAGTCCAACTTCAGCTTATCAGGTGCCC...CTGGAAGTCCCTCGCCCACAGTGTGTGTTCACACCGACTCCACCTCAGAGCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR TCA 90 bp | AGTTACAGGTGCCACAGGGACCGGGTTGTTGACACAGGACATGGGTGGTGGAGCGGGCACCTGATAAGCTaGAGTTGGACTGGTGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SYRCHRDRVVDTGHGWWSGHLIS*SWTGGG Trigger: ACCTCCACCAGTCCAACTTCAGCTTATCAGGTGCCC...GCTCCACCACCCATGTCCTGTGTCAACAACCCGGTCCCTGTGGCACCTGTAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR GCA 90 bp | ACAGGGCGCAAAAGAACCATCACTCAGAGGGTCATGGAGGAGTGGAGGGAACAGTGCTCCAGTAGTGGGTaGCATCGGTTCCCAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TGRKRTITQRVMEEWREQCSSSG*HRFPGW Trigger: CCAGCCTGGGAACCGATGGCACCCACTACTGGAGCA...CTGTTCCCTCCACTCCTCCATGACCCTCTGAGTGATGGTTCTTTTGCGCCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR GCA 90 bp | AGGAAAGAGCATCGCTCAATCTCCCCTCCGTCAGTACCAACTAAAACTGTGGGCCAGGGGGCGCCACAATaGGGTGGCCTGTACGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RKEHRSISPPSVPTKTVGQGAPQ*GGLYAL Trigger: CAAGGCGTACAGGCCACCGCATTGTGGCGCCCCCTG...GCCCACAGTTTTAGTTGGTACTGACGGAGGGGAGATTGAGCGATGCTCTTTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR GCA 90 bp | ATCACTCAGAGGGTCATGGAGGAGTGGAGGGAACAGTATAGGACGATGCTAAACCCACGGCGGCGAACATaGCGCCGTACTTCTGGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: ITQRVMEEWREQYRTMLNPRRRT*RRTSGA Trigger: CGCGCCAGAAGTACGGCGGCATGTTCGCCGCCGTGG...GTTTAGCATCGTCCTATACTGTTCCCTCCACTCCTCCATGACCCTCTGAGTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114158.9 |
||
| CDS-3UTR CCA 90 bp | AGTTACAGGTGCCACAGGGACCGGGTTGTTGACACAGGACATGGGTGGTGGAGCATGTTTGGGTGTAGCTaGCACCTCGTACACAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SYRCHRDRVVDTGHGWWSMFGCS*HLVHRP Trigger: GGGCCTGTGTACGAGGTGCCAGCTACACCCAAACAT...GCTCCACCACCCATGTCCTGTGTCAACAACCCGGTCCCTGTGGCACCTGTAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR CCA 90 bp | CCAGTTACAGGTGCCACAGGGACCGGGTTGTTGACACAGGACATGGGTGGTGGAAGGCGTCGAAGTCGATaGTCTTGTTCTCGTAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PVTGATGTGLLTQDMGGGRRRSR*SCSRRR Trigger: GCGCCTACGAGAACAAGACCATCGACTTCGACGCCT...TCCACCACCCATGTCCTGTGTCAACAACCCGGTCCCTGTGGCACCTGTAACTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114158.9 |
||
| CDS-3UTR GCA 90 bp | GCTACAGGGCGCAAAAGAACCATCACTCAGAGGGTCATGGAGGAGTGGAGGGAACGGTCACTGGTGATGTaGGGGATGCTCTTCTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ATGRKRTITQRVMEEWRERSLVM*GMLFFP Trigger: GGGGAAGAAGAGCATCCCGCACATCACCAGTGACCG...TTCCCTCCACTCCTCCATGACCCTCTGAGTGATGGTTCTTTTGCGCCCTGTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031004.11 |
||
| CDS-3UTR GCA 90 bp | CCAGTTACAGGTGCCACAGGGACCGGGTTGTTGACACAGGACATGGGTGGTGGATTGACACCTTTGTCCTaGACCAGCACCTCCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PVTGATGTGLLTQDMGGGLTPLS*TSTSSS Trigger: AGAGCTGGAGGTGCTGGTGCAGGACAAAGGTGTCAA...TCCACCACCCATGTCCTGTGTCAACAACCCGGTCCCTGTGGCACCTGTAACTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR GCA 90 bp | ACAGCTACAGGGCGCAAAAGAACCATCACTCAGAGGGTCATGGAGGAGTGGAGGCCACTACCTGTGACCTaGAAGTCTCCACAGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TATGRKRTITQRVMEEWRPLPVT*KSPQAS Trigger: GCTGGCCTGTGGAGACTTGCAGGTCACAGGTAGTGG...CCTCCACTCCTCCATGACCCTCTGAGTGATGGTTCTTTTGCGCCCTGTAGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR GCA 90 bp | AAAAATCTGACTGCCCTGCTCGAACTCCTCAGAGGGTCAGAGACTCAGGCAGCCCCACTACCTGTGACCTaGAAGTCTCCACAGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KNLTALLELLRGSETQAAPLPVT*KSPQAS Trigger: GCTGGCCTGTGGAGACTTGCAGGTCACAGGTAGTGG...GGCTGCCTGAGTCTCTGACCCTCTGAGGAGTTCGAGCAGGGCAGTCAGATTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR CCA 90 bp | ATGGCCAGTTACAGGTGCCACAGGGACCGGGTTGTTGACACAGGACATGGGTGGGCTGCTTTAGTGCCCTaGAAGAAGTCATCAGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: MASYRCHRDRVVDTGHGWAALVP*KKSSAE Trigger: CTCGGCTGATGACTTCTTCCAGGGCACTAAAGCAGC...CCACCCATGTCCTGTGTCAACAACCCGGTCCCTGTGGCACCTGTAACTGGCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR CCA 90 bp | TGGCCAGTTACAGGTGCCACAGGGACCGGGTTGTTGACACAGGACATGGGTGGTAGTCACAGCAGGATTTaGTGTCTGCTGCTTCGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: WPVTGATGTGLLTQDMGGSHSRI*CLLLRA Trigger: GGCACGAAGCAGCAGACACCAAATCCTGCTGTGACT...ACCACCCATGTCCTGTGTCAACAACCCGGTCCCTGTGGCACCTGTAACTGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR CCA 90 bp | AGTCAGGGTGGGGATGGGGACCACATCTTTCTAGTGAAGACTCATGGGAGCCTTGGCGCCACAATGCGGTaGCCTGTACGCCTTGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: SQGGDGDHIFLVKTHGSLGATMR*PVRLGL Trigger: CAATCCAAGGCGTACAGGCCACCGCATTGTGGCGCC...AAGGCTCCCATGAGTCTTCACTAGAAAGATGTGGTCCCCATCCCCACCCTGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR TCA 90 bp | ATCACTCAGAGGGTCATGGAGGAGTGGAGGGAACAGTATAGGACGATGCTAAACGGTCTGCTCAGAGCATaGCCCTCGGGACCCGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: ITQRVMEEWREQYRTMLNGLLRA*PSGPVM Trigger: CATCACGGGTCCCGAGGGTCATGCTCTGAGCAGACC...GTTTAGCATCGTCCTATACTGTTCCCTCCACTCCTCCATGACCCTCTGAGTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR GCA 90 bp | ACAGCTACAGGGCGCAAAAGAACCATCACTCAGAGGGTCATGGAGGAGTGGAGGGTTGAAGATCTTGGCTaGGTTGGTGCTGGTGACGGC | + |
|
Preference number: 4 (lower is better) Translates to: TATGRKRTITQRVMEEWRVEDLG*VGAGDG Trigger: GCCGTCACCAGCACCAACGCAGCCAAGATCTTCAAC...CCTCCACTCCTCCATGACCCTCTGAGTGATGGTTCTTTTGCGCCCTGTAGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR CCA 90 bp | GCCACTCTGCATCTTCACAGGTCTCAGTCAGGGTGGGGATGGGGACCACATCTTAGTCACAGCAGGATTTaGTGTCTGCTGCTTCGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ATLHLHRSQSGWGWGPHLSHSRI*CLLLRA Trigger: GGCACGAAGCAGCAGACACCAAATCCTGCTGTGACT...AAGATGTGGTCCCCATCCCCACCCTGACTGAGACCTGTGAAGATGCAGAGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR CCA 90 bp | AGGAAAGAGCATCGCTCAATCTCCCCTCCGTCAGTACCAACTAAAACTGTGGGCCCAGGCTGGCGGCTATaGGCTCACCGAAGACAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RKEHRSISPPSVPTKTVGPGWRL*AHRRQE Trigger: CTCTTGTCTTCGGTGAGCCCATAGCCGCCAGCCTGG...GCCCACAGTTTTAGTTGGTACTGACGGAGGGGAGATTGAGCGATGCTCTTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR CCA 90 bp | GTTTGGAAATCTCCCCTTGGGGCTAAGGTCTTGGCATCGGGTCTATGTCGGTCCATGTTTGGGTGTAGCTaGCACCTCGTACACAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VWKSPLGAKVLASGLCRSMFGCS*HLVHRP Trigger: GGGCCTGTGTACGAGGTGCCAGCTACACCCAAACAT...GGACCGACATAGACCCGATGCCAAGACCTTAGCCCCAAGGGGAGATTTCCAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR CCA 90 bp | ACAGCTACAGGGCGCAAAAGAACCATCACTCAGAGGGTCATGGAGGAGTGGAGGGAGGTTCCGGATGGGTaGGGGTTGGTGTTTAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TATGRKRTITQRVMEEWREVPDG*GLVFRR Trigger: CCTTCTAAACACCAACCCCCACCCATCCGGAACCTC...CCTCCACTCCTCCATGACCCTCTGAGTGATGGTTCTTTTGCGCCCTGTAGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR CCA 90 bp | GCTACAGGGCGCAAAAGAACCATCACTCAGAGGGTCATGGAGGAGTGGAGGGAAGAGGTTCCGGATGGGTaGGGGTTGGTGTTTAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ATGRKRTITQRVMEEWREEVPDG*GLVFRR Trigger: CCTTCTAAACACCAACCCCCACCCATCCGGAACCTC...TTCCCTCCACTCCTCCATGACCCTCTGAGTGATGGTTCTTTTGCGCCCTGTAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR CCA 90 bp | CACAGGTCTCAGTCAGGGTGGGGATGGGGACCACATCTTTCTAGTGAAGACTCACTGAAGTTGGACTGGTaGAGGTTCCGGATGGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HRSQSGWGWGPHLSSEDSLKLDW*RFRMGG Trigger: CCCACCCATCCGGAACCTCCACCAGTCCAACTTCAG...TGAGTCTTCACTAGAAAGATGTGGTCCCCATCCCCACCCTGACTGAGACCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR TCA 90 bp | AAAAATCTGACTGCCCTGCTCGAACTCCTCAGAGGGTCAGAGACTCAGGCAGCCTGTACACAGGGCAATTaGTCCGGCCTGCAATGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KNLTALLELLRGSETQAACTQGN*SGLQWQ Trigger: TTGCCATTGCAGGCCGGATCAATTGCCCTGTGTACA...GGCTGCCTGAGTCTCTGACCCTCTGAGGAGTTCGAGCAGGGCAGTCAGATTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR GCA 90 bp | ACAGGGCGCAAAAGAACCATCACTCAGAGGGTCATGGAGGAGTGGAGGGAACAGTTGACACCTTTGTCCTaGACCAGCACCTCCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TGRKRTITQRVMEEWREQLTPLS*TSTSSS Trigger: AGAGCTGGAGGTGCTGGTGCAGGACAAAGGTGTCAA...CTGTTCCCTCCACTCCTCCATGACCCTCTGAGTGATGGTTCTTTTGCGCCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR GCA 90 bp | ACAGCTACAGGGCGCAAAAGAACCATCACTCAGAGGGTCATGGAGGAGTGGAGGGCAATTGATCCGGCCTaGAATGGCAATAGCCCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TATGRKRTITQRVMEEWRAIDPA*NGNSPE Trigger: TTCCGGGCTATTGCCATTGCAGGCCGGATCAATTGC...CCTCCACTCCTCCATGACCCTCTGAGTGATGGTTCTTTTGCGCCCTGTAGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR CCA 90 bp | AGTTACAGGTGCCACAGGGACCGGGTTGTTGACACAGGACATGGGTGGTGGAGCGGTCTTCATCTTATCTaGGTCCCAGATGACTACGTC | + |
|
Preference number: 4 (lower is better) Translates to: SYRCHRDRVVDTGHGWWSGLHLI*VPDDYV Trigger: GACGTAGTCATCTGGGACCCAGATAAGATGAAGACC...GCTCCACCACCCATGTCCTGTGTCAACAACCCGGTCCCTGTGGCACCTGTAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR CCA 90 bp | TGGCCAGTTACAGGTGCCACAGGGACCGGGTTGTTGACACAGGACATGGGTGGTGGTCTTCATCTTATCTaGGTCCCAGATGACTACGTC | + |
|
Preference number: 4 (lower is better) Translates to: WPVTGATGTGLLTQDMGGGLHLI*VPDDYV Trigger: GACGTAGTCATCTGGGACCCAGATAAGATGAAGACC...ACCACCCATGTCCTGTGTCAACAACCCGGTCCCTGTGGCACCTGTAACTGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR CCA 90 bp | ATGGCCAGTTACAGGTGCCACAGGGACCGGGTTGTTGACACAGGACATGGGTGGGTGGCCTGTACGCCTTaGATTGTTGTCATCTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: MASYRCHRDRVVDTGHGWVACTP*IVVIYL Trigger: CAGATAGATGACAACAATCCAAGGCGTACAGGCCAC...CCACCCATGTCCTGTGTCAACAACCCGGTCCCTGTGGCACCTGTAACTGGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR TCA 90 bp | ACAGCTACAGGGCGCAAAAGAACCATCACTCAGAGGGTCATGGAGGAGTGGAGGCATCATACCAGCTTGTaGTGTCCACGTGGAGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TATGRKRTITQRVMEEWRHHTSL*CPRGGN Trigger: ATTCCCTCCACGTGGACATCACAAGCTGGTATGATG...CCTCCACTCCTCCATGACCCTCTGAGTGATGGTTCTTTTGCGCCCTGTAGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR TCA 90 bp | GCTACAGGGCGCAAAAGAACCATCACTCAGAGGGTCATGGAGGAGTGGAGGGAACATCATACCAGCTTGTaGTGTCCACGTGGAGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: ATGRKRTITQRVMEEWREHHTSL*CPRGGN Trigger: ATTCCCTCCACGTGGACATCACAAGCTGGTATGATG...TTCCCTCCACTCCTCCATGACCCTCTGAGTGATGGTTCTTTTGCGCCCTGTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR TCA 90 bp | ATCACTCAGAGGGTCATGGAGGAGTGGAGGGAACAGTATAGGACGATGCTAAACAGTGGCCACTACCTGTaGCCTGCAAGTCTCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: ITQRVMEEWREQYRTMLNSGHYL*PASLHR Trigger: CCTGTGGAGACTTGCAGGTCACAGGTAGTGGCCACT...GTTTAGCATCGTCCTATACTGTTCCCTCCACTCCTCCATGACCCTCTGAGTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR TCA 90 bp | ACAGCTACAGGGCGCAAAAGAACCATCACTCAGAGGGTCATGGAGGAGTGGAGGGCTCTTCTATACCATTaGCACCCTCAGGGATCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TATGRKRTITQRVMEEWRALLYH*HPQGSE Trigger: CTCTGATCCCTGAGGGTGTCAATGGTATAGAAGAGC...CCTCCACTCCTCCATGACCCTCTGAGTGATGGTTCTTTTGCGCCCTGTAGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR TCA 90 bp | GTTTGGAAATCTCCCCTTGGGGCTAAGGTCTTGGCATCGGGTCTATGTCGGTCCGCTCTTCTATACCATTaGCACCCTCAGGGATCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VWKSPLGAKVLASGLCRSALLYH*HPQGSE Trigger: CTCTGATCCCTGAGGGTGTCAATGGTATAGAAGAGC...GGACCGACATAGACCCGATGCCAAGACCTTAGCCCCAAGGGGAGATTTCCAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR TCA 90 bp | ACAGGTCTCAGTCAGGGTGGGGATGGGGACCACATCTTTCTAGTGAAGACTCATTATCTGGGTCCCAGATaGCTACGTCAGCATCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TGLSQGGDGDHIFLVKTHYLGPR*LRQHRS Trigger: GCTCCGATGCTGACGTAGTCATCTGGGACCCAGATA...ATGAGTCTTCACTAGAAAGATGTGGTCCCCATCCCCACCCTGACTGAGACCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR GCA 90 bp | AGTTACAGGTGCCACAGGGACCGGGTTGTTGACACAGGACATGGGTGGTGGAGCGGATTTGGTGTCTGCTaGTTCGTGCCATTTCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SYRCHRDRVVDTGHGWWSGFGVC*FVPFLK Trigger: TTTGAGAAATGGCACGAAGCAGCAGACACCAAATCC...GCTCCACCACCCATGTCCTGTGTCAACAACCCGGTCCCTGTGGCACCTGTAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR GCA 90 bp | TGCATCTTCACAGGTCTCAGTCAGGGTGGGGATGGGGACCACATCTTTCTAGTGGCAATTGATCCGGCCTaGAATGGCAATAGCCCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CIFTGLSQGGDGDHIFLVAIDPA*NGNSPE Trigger: TTCCGGGCTATTGCCATTGCAGGCCGGATCAATTGC...CACTAGAAAGATGTGGTCCCCATCCCCACCCTGACTGAGACCTGTGAAGATGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR GCA 90 bp | ACAGGTCTCAGTCAGGGTGGGGATGGGGACCACATCTTTCTAGTGAAGACTCATGTTGAAGATCTTGGCTaGGTTGGTGCTGGTGACGGC | + |
|
Preference number: 4 (lower is better) Translates to: TGLSQGGDGDHIFLVKTHVEDLG*VGAGDG Trigger: GCCGTCACCAGCACCAACGCAGCCAAGATCTTCAAC...ATGAGTCTTCACTAGAAAGATGTGGTCCCCATCCCCACCCTGACTGAGACCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR CCA 90 bp | CACAGGTCTCAGTCAGGGTGGGGATGGGGACCACATCTTTCTAGTGAAGACTCAGCTGCTTTAGTGCCCTaGAAGAAGTCATCAGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: HRSQSGWGWGPHLSSEDSAALVP*KKSSAE Trigger: CTCGGCTGATGACTTCTTCCAGGGCACTAAAGCAGC...TGAGTCTTCACTAGAAAGATGTGGTCCCCATCCCCACCCTGACTGAGACCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR CCA 90 bp | ACAGGTCTCAGTCAGGGTGGGGATGGGGACCACATCTTTCTAGTGAAGACTCATCGGATGGGTGGGGGTTaGTGTTTAGAAGGCGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TGLSQGGDGDHIFLVKTHRMGGG*CLEGED Trigger: ATCCTCGCCTTCTAAACACCAACCCCCACCCATCCG...ATGAGTCTTCACTAGAAAGATGTGGTCCCCATCCCCACCCTGACTGAGACCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR CCA 90 bp | CACAGGTCTCAGTCAGGGTGGGGATGGGGACCACATCTTTCTAGTGAAGACTCAAAGCTGAAGTTGGACTaGTGGAGGTTCCGGATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HRSQSGWGWGPHLSSEDSKLKLD*WRFRMG Trigger: ACCCATCCGGAACCTCCACCAGTCCAACTTCAGCTT...TGAGTCTTCACTAGAAAGATGTGGTCCCCATCCCCACCCTGACTGAGACCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR CCA 90 bp | TGCATCTTCACAGGTCTCAGTCAGGGTGGGGATGGGGACCACATCTTTCTAGTGAAGCTGAAGTTGGACTaGTGGAGGTTCCGGATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: CIFTGLSQGGDGDHIFLVKLKLD*WRFRMG Trigger: ACCCATCCGGAACCTCCACCAGTCCAACTTCAGCTT...CACTAGAAAGATGTGGTCCCCATCCCCACCCTGACTGAGACCTGTGAAGATGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR TCA 90 bp | CACAGGTCTCAGTCAGGGTGGGGATGGGGACCACATCTTTCTAGTGAAGACTCAAGACTTGGAAGGAGTTaGCACCTTTGTCCTGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: HRSQSGWGWGPHLSSEDSRLGRS*HLCPAP Trigger: TGGTGCAGGACAAAGGTGTCAACTCCTTCCAAGTCT...TGAGTCTTCACTAGAAAGATGTGGTCCCCATCCCCACCCTGACTGAGACCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR CCA 90 bp | ATGGCCAGTTACAGGTGCCACAGGGACCGGGTTGTTGACACAGGACATGGGTGGTTGTTGTCATCTATCTaGGCACCTGATAAGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: MASYRCHRDRVVDTGHGWLLSSI*APDKLK Trigger: CTTCAGCTTATCAGGTGCCCAGATAGATGACAACAA...CCACCCATGTCCTGTGTCAACAACCCGGTCCCTGTGGCACCTGTAACTGGCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR CCA 90 bp | AGGAATGGACGTTTTCCCATAATCCTTCACTCTTGCATATCTGGCTCATCTGAGCCAGGCTGGCGGCTATaGGCTCACCGAAGACAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RNGRFPIILHSCISGSSEPGWRL*AHRRQE Trigger: CTCTTGTCTTCGGTGAGCCCATAGCCGCCAGCCTGG...CTCAGATGAGCCAGATATGCAAGAGTGAAGGATTATGGGAAAACGTCCATTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR CCA 90 bp | AGTTACAGGTGCCACAGGGACCGGGTTGTTGACACAGGACATGGGTGGTGGAGCTCCACAGTTGATTTATaGCTTTTGGCTGTTATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SYRCHRDRVVDTGHGWWSSTVDL*LLAVMV Trigger: GACCATAACAGCCAAAAGCCATAAATCAACTGTGGA...GCTCCACCACCCATGTCCTGTGTCAACAACCCGGTCCCTGTGGCACCTGTAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR TCA 90 bp | AGTTACAGGTGCCACAGGGACCGGGTTGTTGACACAGGACATGGGTGGTGGAGCATCCGTTTTTGTTCCTaGGCTATCAAATCTCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: SYRCHRDRVVDTGHGWWSIRFCS*AIKSPF Trigger: AAATGGAGATTTGATAGCTCAGGAACAAAAACGGAT...GCTCCACCACCCATGTCCTGTGTCAACAACCCGGTCCCTGTGGCACCTGTAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR TCA 90 bp | CAGGGCGCAAAAGAACCATCACTCAGAGGGTCATGGAGGAGTGGAGGGAACAGTGTTGTACTCCACAGTTaGTTTATGGCTTTTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QGAKEPSLRGSWRSGGNSVVLHS*FMAFGC Trigger: ACAGCCAAAAGCCATAAATCAACTGTGGAGTACAAC...ACTGTTCCCTCCACTCCTCCATGACCCTCTGAGTGATGGTTCTTTTGCGCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR GCA 90 bp | AGGGTCATGGAGGAGTGGAGGGAACAGTATAGGACGATGCTAAACCTGGGGTCAGGATTTGGTGTCTGCTaGTTCGTGCCATTTCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RVMEEWREQYRTMLNLGSGFGVC*FVPFLK Trigger: TTTGAGAAATGGCACGAAGCAGCAGACACCAAATCC...TGACCCCAGGTTTAGCATCGTCCTATACTGTTCCCTCCACTCCTCCATGACCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR CCA 90 bp | ACAGGTCTCAGTCAGGGTGGGGATGGGGACCACATCTTTCTAGTGAAGACTCATGTGGCCTGTACGCCTTaGATTGTTGTCATCTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: TGLSQGGDGDHIFLVKTHVACTP*IVVIYL Trigger: CAGATAGATGACAACAATCCAAGGCGTACAGGCCAC...ATGAGTCTTCACTAGAAAGATGTGGTCCCCATCCCCACCCTGACTGAGACCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR GCA 90 bp | AAACAGAGAAGGAAAGAGCATCGCTCAATCTCCCCTCCGTCAGTACCAACTAAATTTCTTCCTGGCCAGTaGGATGATGTCCGCTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: KQRRKEHRSISPPSVPTKFLPGQ*DDVRCT Trigger: AGTGCAGCGGACATCATCGCACTGGCCAGGAAGAAA...TTTAGTTGGTACTGACGGAGGGGAGATTGAGCGATGCTCTTTCCTTCTCTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR CCA 90 bp | CAGGGCGCAAAAGAACCATCACTCAGAGGGTCATGGAGGAGTGGAGGGAACAGTTCCACAGTTGATTTATaGCTTTTGGCTGTTATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QGAKEPSLRGSWRSGGNSSTVDL*LLAVMV Trigger: GACCATAACAGCCAAAAGCCATAAATCAACTGTGGA...ACTGTTCCCTCCACTCCTCCATGACCCTCTGAGTGATGGTTCTTTTGCGCCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR CCA 90 bp | CACAGGTCTCAGTCAGGGTGGGGATGGGGACCACATCTTTCTAGTGAAGACTCATTGTTGTCATCTATCTaGGCACCTGATAAGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HRSQSGWGWGPHLSSEDSLLSSI*APDKLK Trigger: CTTCAGCTTATCAGGTGCCCAGATAGATGACAACAA...TGAGTCTTCACTAGAAAGATGTGGTCCCCATCCCCACCCTGACTGAGACCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR TCA 90 bp | GGATGGGGACCACATCTTTCTAGTGAAGACTCATGGGAGCCTTCATTTTTAAGATGTACACAGGGCAATTaGTCCGGCCTGCAATGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GWGPHLSSEDSWEPSFLRCTQGN*SGLQWQ Trigger: TTGCCATTGCAGGCCGGATCAATTGCCCTGTGTACA...TCTTAAAAATGAAGGCTCCCATGAGTCTTCACTAGAAAGATGTGGTCCCCATCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR GCA 90 bp | AAACAGAGAAGGAAAGAGCATCGCTCAATCTCCCCTCCGTCAGTACCAACTAAAGCAGGATTTGGTGTCTaGTGCTTCGTGCCATTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KQRRKEHRSISPPSVPTKAGFGV*CFVPFL Trigger: GAGAAATGGCACGAAGCAGCAGACACCAAATCCTGC...TTTAGTTGGTACTGACGGAGGGGAGATTGAGCGATGCTCTTTCCTTCTCTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR GCA 90 bp | GGATGGGGACCACATCTTTCTAGTGAAGACTCATGGGAGCCTTCATTTTTAAGATTTCTTCCTGGCCAGTaGGATGATGTCCGCTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: GWGPHLSSEDSWEPSFLRFLPGQ*DDVRCT Trigger: AGTGCAGCGGACATCATCGCACTGGCCAGGAAGAAA...TCTTAAAAATGAAGGCTCCCATGAGTCTTCACTAGAAAGATGTGGTCCCCATCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR TCA 90 bp | CGATGTCCATCAGCCGCGCGCGCTCAGACTTGCATACGTAACTTACTAACATGCCTCCTATTTGTTTTATaGGTCCATCTTCTAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: RCPSAARAQTCIRNLLTCLLFVL*VHLLGR Trigger: TCTACCTAGAAGATGGACTCATAAAACAAATAGGAG...GCATGTTAGTAAGTTACGTATGCAAGTCTGAGCGCGCGCGGCTGATGGACATCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR TCA 90 bp | TGCATCTTCACAGGTCTCAGTCAGGGTGGGGATGGGGACCACATCTTTCTAGTGCTCCTATTTGTTTTATaGGTCCATCTTCTAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: CIFTGLSQGGDGDHIFLVLLFVL*VHLLGR Trigger: TCTACCTAGAAGATGGACTCATAAAACAAATAGGAG...CACTAGAAAGATGTGGTCCCCATCCCCACCCTGACTGAGACCTGTGAAGATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR TCA 90 bp | AGGGTCATGGAGGAGTGGAGGGAACAGTATAGGACGATGCTAAACCTGGGGTCAATCCGTTTTTGTTCCTaGGCTATCAAATCTCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: RVMEEWREQYRTMLNLGSIRFCS*AIKSPF Trigger: AAATGGAGATTTGATAGCTCAGGAACAAAAACGGAT...TGACCCCAGGTTTAGCATCGTCCTATACTGTTCCCTCCACTCCTCCATGACCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR TCA 90 bp | GGATGGGGACCACATCTTTCTAGTGAAGACTCATGGGAGCCTTCATTTTTAAGAGTTGTACTCCACAGTTaGTTTATGGCTTTTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GWGPHLSSEDSWEPSFLRVVLHS*FMAFGC Trigger: ACAGCCAAAAGCCATAAATCAACTGTGGAGTACAAC...TCTTAAAAATGAAGGCTCCCATGAGTCTTCACTAGAAAGATGTGGTCCCCATCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS GCA 90 bp | CAGCAGAGCCCGAGGGCTCGCTCACATCACTGGCCGTGTCTTCGCTaGCGCCGGGGCACGGCAGGCCCACGGCGTCGGGCCGGCCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: QQSPRARSHHWPCLR*RRGTAGPRRRAGQR Trigger: GCGCTGGCCGGCCCGACGCCGTGGGCCTGCCGTGCCCCGGCGGCAGCGAAGACACGGCCAGTGATGTGAGCGAGCCCTCGGGCTCTGCTG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114158.9 ENSMUST00000202434.4 |
||
| CDS CCA 90 bp | GCCGAGTGGCAGGTCGCGGGGCGCAGGACATCGGATGCGCAACGCTaGCGGTCTGTCATCGCGATCGCCTGGCGAACTGACAGCAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: AEWQVAGRRTSDAQR*RSVIAIAWRTDSRA Trigger: GGCTCTGCTGTCAGTTCGCCAGGCGATCGCGATGACAGACCGCCAGCGTTGCGCATCCGATGTCCTGCGCCCCGCGACCTGCCACTCGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114158.9 ENSMUST00000202434.4 |
||
| CDS TCA 90 bp | GGATGCGCAACGCTGGCGGTCTGTCATCGCGATCGCCTGGCGAACTaGCAGCAGAGCCCGAGGGCTCGCTCACATCACTGGCCGTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GCATLAVCHRDRLAN*QQSPRARSHHWPCL Trigger: AAGACACGGCCAGTGATGTGAGCGAGCCCTCGGGCTCTGCTGTCAGTTCGCCAGGCGATCGCGATGACAGACCGCCAGCGTTGCGCATCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114158.9 ENSMUST00000202434.4 |
||
| CDS CCA 90 bp | AGGACATCGGATGCGCAACGCTGGCGGTCTGTCATCGCGATCGCCTaGCGAACTGACAGCAGAGCCCGAGGGCTCGCTCACATCACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RTSDAQRWRSVIAIA*RTDSRARGLAHITG Trigger: GCCAGTGATGTGAGCGAGCCCTCGGGCTCTGCTGTCAGTTCGCCAGGCGATCGCGATGACAGACCGCCAGCGTTGCGCATCCGATGTCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114158.9 ENSMUST00000202434.4 |
||
| CDS-3UTR CAA 90 bp | ACCGCACCGTCCTCAAGGCCTGGGTGGGGTGTCAGGACACCCCTTTCTGGGTGTAAGGAGTTGACACCTTaGTCCTGCACCAGCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TAPSSRPGWGVRTPLSGCKELTP*SCTSTS Trigger: GGAGGTGCTGGTGCAGGACAAAGGTGTCAACTCCTT...ACACCCAGAAAGGGGTGTCCTGACACCCCACCCAGGCCTTGAGGACGGTGCGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR CAA 90 bp | ACCGCACCGTCCTCAAGGCCTGGGTGGGGTGTCAGGACACCCCTTTCTGGGTGTTTAGAAGGCGAGGATTaGGCAGAAGGAGCAGGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TAPSSRPGWGVRTPLSGCLEGED*AEGAGA Trigger: TGCTCCTGCTCCTTCTGCCAAATCCTCGCCTTCTAA...ACACCCAGAAAGGGGTGTCCTGACACCCCACCCAGGCCTTGAGGACGGTGCGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR CAA 90 bp | TGGCCAGTTACAGGTGCCACAGGGACCGGGTTGTTGACACAGGACATGGGTGGTCCGGATGGGTGGGGGTaGGTGTTTAGAAGGCGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: WPVTGATGTGLLTQDMGGPDGWG*VFRRRG Trigger: TCCTCGCCTTCTAAACACCAACCCCCACCCATCCGG...ACCACCCATGTCCTGTGTCAACAACCCGGTCCCTGTGGCACCTGTAACTGGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR CAA 90 bp | TGCATCTTCACAGGTCTCAGTCAGGGTGGGGATGGGGACCACATCTTTCTAGTGCGGTCACTCTGGCCATaGTCCCGGCCGAGTGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CIFTGLSQGGDGDHIFLVRSLWP*SRPSGR Trigger: CCTGCCACTCGGCCGGGACAATGGCCAGAGTGACCG...CACTAGAAAGATGTGGTCCCCATCCCCACCCTGACTGAGACCTGTGAAGATGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114158.9 |
||
| CDS-3UTR CAA 90 bp | ACCGCACCGTCCTCAAGGCCTGGGTGGGGTGTCAGGACACCCCTTTCTGGGTGTGTACGCCTTGGATTGTaGTCATCTATCTGGGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: TAPSSRPGWGVRTPLSGCVRLGL*SSIWAP Trigger: AGGTGCCCAGATAGATGACAACAATCCAAGGCGTAC...ACACCCAGAAAGGGGTGTCCTGACACCCCACCCAGGCCTTGAGGACGGTGCGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS CCA 90 bp | CCCGAAAACCTTGCTTCTGATCCTGACACGCTGGTAGAGATGCTCTaGGAATGGCTTCCGAGGGATGAAGCGGCCCATGCCCTTGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: PENLASDPDTLVEML*EWLPRDEAAHALAD Trigger: GTCAGCAAGGGCATGGGCCGCTTCATCCCTCGGAAGCCATTCCCAGAGCATCTCTACCAGCGTGTCAGGATCAGAAGCAAGGTTTTCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR CAA 90 bp | ATGGCCAGTTACAGGTGCCACAGGGACCGGGTTGTTGACACAGGACATGGGTGGAAGCGGCCCATGCCCTaGCTGACACTGATGTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: MASYRCHRDRVVDTGHGWKRPMP*LTLMFP Trigger: TGGAAACATCAGTGTCAGCAAGGGCATGGGCCGCTT...CCACCCATGTCCTGTGTCAACAACCCGGTCCCTGTGGCACCTGTAACTGGCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR CAA 90 bp | ACAGCTACAGGGCGCAAAAGAACCATCACTCAGAGGGTCATGGAGGAGTGGAGGGCAGGAGCAGCATGTTaGGGTGTAGCTGGCACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: TATGRKRTITQRVMEEWRAGAAC*GVAGTS Trigger: CGAGGTGCCAGCTACACCCAAACATGCTGCTCCTGC...CCTCCACTCCTCCATGACCCTCTGAGTGATGGTTCTTTTGCGCCCTGTAGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS TCA 90 bp | CCTCCAGCTCCTCGGGTCTGCTCAGAGCATGACCCTCGGGACCCGTaGTGCCCATCTCCAGGATCCGTTTTTGTTCCTGAGCTATCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: PPAPRVCSEHDPRDP*CPSPGSVFVPELSN Trigger: ATTTGATAGCTCAGGAACAAAAACGGATCCTGGAGATGGGCATCACGGGTCCCGAGGGTCATGCTCTGAGCAGACCCGAGGAGCTGGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR CAA 90 bp | ATGGCCAGTTACAGGTGCCACAGGGACCGGGTTGTTGACACAGGACATGGGTGGATGTACACAGGGCAATaGATCCGGCCTGCAATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: MASYRCHRDRVVDTGHGWMYTGQ*IRPAMA Trigger: TGCCATTGCAGGCCGGATCAATTGCCCTGTGTACAT...CCACCCATGTCCTGTGTCAACAACCCGGTCCCTGTGGCACCTGTAACTGGCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR CAA 90 bp | CATGCTCTGAGGTGGAGTCGGTGTGAACACACACTGTGGGCGAGGGACTTCCAGTGGTTCTCATCCATCTaGCCAGTAGCCACTGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: HALRWSRCEHTLWARDFQWFSSI*PVATAL Trigger: CAAGGCAGTGGCTACTGGCAAGATGGATGAGAACCA...CTGGAAGTCCCTCGCCCACAGTGTGTGTTCACACCGACTCCACCTCAGAGCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR CAA 90 bp | CGATGTCCATCAGCCGCGCGCGCTCAGACTTGCATACGTAACTTACTAACATGCGCAGGAGCAGCATGTTaGGGTGTAGCTGGCACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RCPSAARAQTCIRNLLTCAGAAC*GVAGTS Trigger: CGAGGTGCCAGCTACACCCAAACATGCTGCTCCTGC...GCATGTTAGTAAGTTACGTATGCAAGTCTGAGCGCGCGCGGCTGATGGACATCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR CAA 90 bp | CTGAGGTGGAGTCGGTGTGAACACACACTGTGGGCGAGGGACTTCCAGGCAAACTTAGAAGGCGAGGATTaGGCAGAAGGAGCAGGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LRWSRCEHTLWARDFQANLEGED*AEGAGA Trigger: TGCTCCTGCTCCTTCTGCCAAATCCTCGCCTTCTAA...GTTTGCCTGGAAGTCCCTCGCCCACAGTGTGTGTTCACACCGACTCCACCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS CCA 90 bp | AACCTTGCTTCTGATCCTGACACGCTGGTAGAGATGCTCTGGGAATaGCTTCCGAGGGATGAAGCGGCCCATGCCCTTGCTGACACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: NLASDPDTLVEMLWE*LPRDEAAHALADTD Trigger: ATCAGTGTCAGCAAGGGCATGGGCCGCTTCATCCCTCGGAAGCCATTCCCAGAGCATCTCTACCAGCGTGTCAGGATCAGAAGCAAGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR CAA 90 bp | AAAAATCTGACTGCCCTGCTCGAACTCCTCAGAGGGTCAGAGACTCAGGCAGCCAAGGAGTTGACACCTTaGTCCTGCACCAGCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KNLTALLELLRGSETQAAKELTP*SCTSTS Trigger: GGAGGTGCTGGTGCAGGACAAAGGTGTCAACTCCTT...GGCTGCCTGAGTCTCTGACCCTCTGAGGAGTTCGAGCAGGGCAGTCAGATTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR CAA 90 bp | GTTTGGAAATCTCCCCTTGGGGCTAAGGTCTTGGCATCGGGTCTATGTCGGTCCAAGATCTTGGCTGCGTaGGTGCTGGTGACGGCTACA | + |
|
Preference number: 5 (lower is better) Translates to: VWKSPLGAKVLASGLCRSKILAA*VLVTAT Trigger: TGTAGCCGTCACCAGCACCAACGCAGCCAAGATCTT...GGACCGACATAGACCCGATGCCAAGACCTTAGCCCCAAGGGGAGATTTCCAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR CAA 90 bp | ACAGGGCGCAAAAGAACCATCACTCAGAGGGTCATGGAGGAGTGGAGGGAACAGCCTGATAAGCTGAAGTaGGACTGGTGGAGGTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TGRKRTITQRVMEEWREQPDKLK*DWWRFR Trigger: CCGGAACCTCCACCAGTCCAACTTCAGCTTATCAGG...CTGTTCCCTCCACTCCTCCATGACCCTCTGAGTGATGGTTCTTTTGCGCCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR CAA 90 bp | ATGGCCAGTTACAGGTGCCACAGGGACCGGGTTGTTGACACAGGACATGGGTGGGGTGGCCTGTACGCCTaGGATTGTTGTCATCTATCT | + |
|
Preference number: 5 (lower is better) Translates to: MASYRCHRDRVVDTGHGWGGLYA*DCCHLS Trigger: AGATAGATGACAACAATCCAAGGCGTACAGGCCACC...CCACCCATGTCCTGTGTCAACAACCCGGTCCCTGTGGCACCTGTAACTGGCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR CAA 90 bp | CACAGGTCTCAGTCAGGGTGGGGATGGGGACCACATCTTTCTAGTGAAGACTCAAAGCGGCCCATGCCCTaGCTGACACTGATGTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: HRSQSGWGWGPHLSSEDSKRPMP*LTLMFP Trigger: TGGAAACATCAGTGTCAGCAAGGGCATGGGCCGCTT...TGAGTCTTCACTAGAAAGATGTGGTCCCCATCCCCACCCTGACTGAGACCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR CAA 90 bp | CACAGGTCTCAGTCAGGGTGGGGATGGGGACCACATCTTTCTAGTGAAGACTCACCTGATAAGCTGAAGTaGGACTGGTGGAGGTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: HRSQSGWGWGPHLSSEDSPDKLK*DWWRFR Trigger: CCGGAACCTCCACCAGTCCAACTTCAGCTTATCAGG...TGAGTCTTCACTAGAAAGATGTGGTCCCCATCCCCACCCTGACTGAGACCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR CAA 90 bp | CGATGTCCATCAGCCGCGCGCGCTCAGACTTGCATACGTAACTTACTAACATGCTGGTTCTCATCCATCTaGCCAGTAGCCACTGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RCPSAARAQTCIRNLLTCWFSSI*PVATAL Trigger: CAAGGCAGTGGCTACTGGCAAGATGGATGAGAACCA...GCATGTTAGTAAGTTACGTATGCAAGTCTGAGCGCGCGCGGCTGATGGACATCG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
||
| CDS-3UTR CAA 90 bp | CACAGGTCTCAGTCAGGGTGGGGATGGGGACCACATCTTTCTAGTGAAGACTCATGCAACCCGAAAACCTaGCTTCTGATCCTGACACGC | + |
|
Preference number: 5 (lower is better) Translates to: HRSQSGWGWGPHLSSEDSCNPKT*LLILTR Trigger: GCGTGTCAGGATCAGAAGCAAGGTTTTCGGGTTGCA...TGAGTCTTCACTAGAAAGATGTGGTCCCCATCCCCACCCTGACTGAGACCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| CDS-3UTR CAA 90 bp | ACAGGGCGCAAAAGAACCATCACTCAGAGGGTCATGGAGGAGTGGAGGGAACAGGTACGCCTTGGATTGTaGTCATCTATCTGGGCACCT | + |
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Preference number: 5 (lower is better) Translates to: TGRKRTITQRVMEEWREQVRLGL*SSIWAP Trigger: AGGTGCCCAGATAGATGACAACAATCCAAGGCGTAC...CTGTTCCCTCCACTCCTCCATGACCCTCTGAGTGATGGTTCTTTTGCGCCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| CDS-3UTR CAA 90 bp | ACAGGGCGCAAAAGAACCATCACTCAGAGGGTCATGGAGGAGTGGAGGGAACAGCCTGTACGCCTTGGATaGTTGTCATCTATCTGGGCA | + |
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Preference number: 5 (lower is better) Translates to: TGRKRTITQRVMEEWREQPVRLG*LSSIWA Trigger: TGCCCAGATAGATGACAACAATCCAAGGCGTACAGG...CTGTTCCCTCCACTCCTCCATGACCCTCTGAGTGATGGTTCTTTTGCGCCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| CDS-3UTR CAA 90 bp | GTTTGGAAATCTCCCCTTGGGGCTAAGGTCTTGGCATCGGGTCTATGTCGGTCCCCTGTACGCCTTGGATaGTTGTCATCTATCTGGGCA | + |
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Preference number: 5 (lower is better) Translates to: VWKSPLGAKVLASGLCRSPVRLG*LSSIWA Trigger: TGCCCAGATAGATGACAACAATCCAAGGCGTACAGG...GGACCGACATAGACCCGATGCCAAGACCTTAGCCCCAAGGGGAGATTTCCAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| CDS-3UTR CAA 90 bp | GTTTGGAAATCTCCCCTTGGGGCTAAGGTCTTGGCATCGGGTCTATGTCGGTCCGGTGGCCTGTACGCCTaGGATTGTTGTCATCTATCT | + |
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Preference number: 5 (lower is better) Translates to: VWKSPLGAKVLASGLCRSGGLYA*DCCHLS Trigger: AGATAGATGACAACAATCCAAGGCGTACAGGCCACC...GGACCGACATAGACCCGATGCCAAGACCTTAGCCCCAAGGGGAGATTTCCAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| CDS-3UTR CAA 90 bp | CATGCTCTGAGGTGGAGTCGGTGTGAACACACACTGTGGGCGAGGGACTTCCAGCAGGTTCTCTCCTATTaGTTTTATGAGTCCATCTTC | + |
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Preference number: 5 (lower is better) Translates to: HALRWSRCEHTLWARDFQQVLSY*FYESIF Trigger: GAAGATGGACTCATAAAACAAATAGGAGAGAACCTG...CTGGAAGTCCCTCGCCCACAGTGTGTGTTCACACCGACTCCACCTCAGAGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| CDS-3UTR CAA 90 bp | ATCACTCAGAGGGTCATGGAGGAGTGGAGGGAACAGTATAGGACGATGCTAAACATGTACACAGGGCAATaGATCCGGCCTGCAATGGCA | + |
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Preference number: 5 (lower is better) Translates to: ITQRVMEEWREQYRTMLNMYTGQ*IRPAMA Trigger: TGCCATTGCAGGCCGGATCAATTGCCCTGTGTACAT...GTTTAGCATCGTCCTATACTGTTCCCTCCACTCCTCCATGACCCTCTGAGTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| CDS-3UTR CAA 90 bp | AGGAATGGACGTTTTCCCATAATCCTTCACTCTTGCATATCTGGCTCATCTGAGCCGGATGGGTGGGGGTaGGTGTTTAGAAGGCGAGGA | + |
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Preference number: 5 (lower is better) Translates to: RNGRFPIILHSCISGSSEPDGWG*VFRRRG Trigger: TCCTCGCCTTCTAAACACCAACCCCCACCCATCCGG...CTCAGATGAGCCAGATATGCAAGAGTGAAGGATTATGGGAAAACGTCCATTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| CDS-3UTR CAA 90 bp | CGATGTCCATCAGCCGCGCGCGCTCAGACTTGCATACGTAACTTACTAACATGCCTCCAGGATCCGTTTTaGTTCCTGAGCTATCAAATC | + |
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Preference number: 5 (lower is better) Translates to: RCPSAARAQTCIRNLLTCLQDPF*FLSYQI Trigger: GATTTGATAGCTCAGGAACAAAAACGGATCCTGGAG...GCATGTTAGTAAGTTACGTATGCAAGTCTGAGCGCGCGCGGCTGATGGACATCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| CDS-3UTR CAA 90 bp | AGGAATGGACGTTTTCCCATAATCCTTCACTCTTGCATATCTGGCTCATCTGAGAAGATCTTGGCTGCGTaGGTGCTGGTGACGGCTACA | + |
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Preference number: 5 (lower is better) Translates to: RNGRFPIILHSCISGSSEKILAA*VLVTAT Trigger: TGTAGCCGTCACCAGCACCAACGCAGCCAAGATCTT...CTCAGATGAGCCAGATATGCAAGAGTGAAGGATTATGGGAAAACGTCCATTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| CDS-3UTR CAA 90 bp | ACAGCTACAGGGCGCAAAAGAACCATCACTCAGAGGGTCATGGAGGAGTGGAGGGTTGATTTATGGCTTTaGGCTGTTATGGTCTTCATC | + |
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Preference number: 5 (lower is better) Translates to: TATGRKRTITQRVMEEWRVDLWL*AVMVFI Trigger: GATGAAGACCATAACAGCCAAAAGCCATAAATCAAC...CCTCCACTCCTCCATGACCCTCTGAGTGATGGTTCTTTTGCGCCCTGTAGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| CDS-3UTR CAA 90 bp | CAGGGCGCAAAAGAACCATCACTCAGAGGGTCATGGAGGAGTGGAGGGAACAGTATGCCCTCAAAGATGTaGTACTCCACAGTTGATTTA | + |
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Preference number: 5 (lower is better) Translates to: QGAKEPSLRGSWRSGGNSMPSKM*YSTVDL Trigger: TAAATCAACTGTGGAGTACAACATCTTTGAGGGCAT...ACTGTTCCCTCCACTCCTCCATGACCCTCTGAGTGATGGTTCTTTTGCGCCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| CDS-3UTR CAA 90 bp | ACAGGGCGCAAAAGAACCATCACTCAGAGGGTCATGGAGGAGTGGAGGGAACAGATGCCCTCAAAGATGTaGTACTCCACAGTTGATTTA | + |
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Preference number: 5 (lower is better) Translates to: TGRKRTITQRVMEEWREQMPSKM*YSTVDL Trigger: TAAATCAACTGTGGAGTACAACATCTTTGAGGGCAT...CTGTTCCCTCCACTCCTCCATGACCCTCTGAGTGATGGTTCTTTTGCGCCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| CDS-3UTR CAA 90 bp | AAACAGAGAAGGAAAGAGCATCGCTCAATCTCCCCTCCGTCAGTACCAACTAAATGCAACCCGAAAACCTaGCTTCTGATCCTGACACGC | + |
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Preference number: 5 (lower is better) Translates to: KQRRKEHRSISPPSVPTKCNPKT*LLILTR Trigger: GCGTGTCAGGATCAGAAGCAAGGTTTTCGGGTTGCA...TTTAGTTGGTACTGACGGAGGGGAGATTGAGCGATGCTCTTTCCTTCTCTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| CDS-3UTR CAA 90 bp | AGGGTCATGGAGGAGTGGAGGGAACAGTATAGGACGATGCTAAACCTGGGGTCAGTTGATTTATGGCTTTaGGCTGTTATGGTCTTCATC | + |
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Preference number: 5 (lower is better) Translates to: RVMEEWREQYRTMLNLGSVDLWL*AVMVFI Trigger: GATGAAGACCATAACAGCCAAAAGCCATAAATCAAC...TGACCCCAGGTTTAGCATCGTCCTATACTGTTCCCTCCACTCCTCCATGACCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| CDS-3UTR CAA 90 bp | ACAGGTCTCAGTCAGGGTGGGGATGGGGACCACATCTTTCTAGTGAAGACTCATTGTTGTACTCCACAGTaGATTTATGGCTTTTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: TGLSQGGDGDHIFLVKTHCCTPQ*IYGFWL Trigger: CAGCCAAAAGCCATAAATCAACTGTGGAGTACAACA...ATGAGTCTTCACTAGAAAGATGTGGTCCCCATCCCCACCCTGACTGAGACCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| CDS-3UTR CAA 90 bp | AGGAAAGAGCATCGCTCAATCTCCCCTCCGTCAGTACCAACTAAAACTGTGGGCTGTTGTACTCCACAGTaGATTTATGGCTTTTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: RKEHRSISPPSVPTKTVGCCTPQ*IYGFWL Trigger: CAGCCAAAAGCCATAAATCAACTGTGGAGTACAACA...GCCCACAGTTTTAGTTGGTACTGACGGAGGGGAGATTGAGCGATGCTCTTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| CDS-3UTR CAA 90 bp | AGGAAAGAGCATCGCTCAATCTCCCCTCCGTCAGTACCAACTAAAACTGTGGGCCAGGTTCTCTCCTATTaGTTTTATGAGTCCATCTTC | + |
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Preference number: 5 (lower is better) Translates to: RKEHRSISPPSVPTKTVGQVLSY*FYESIF Trigger: GAAGATGGACTCATAAAACAAATAGGAGAGAACCTG...GCCCACAGTTTTAGTTGGTACTGACGGAGGGGAGATTGAGCGATGCTCTTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| CDS GCA 72 bp | CCGAGGGCTCGCTCACATCACTGGCCGTGTCTTCGCTaGCGCCGGGGCACGGCAGGCCCACGGCGTCGGGCC | + |
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Preference number: 6 (lower is better) Translates to: PRARSHHWPCLR*RRGTAGPRRRA Trigger: GGCCCGACGCCGTGGGCCTGCCGTGCCCCGGCGGCAGCGAAGACACGGCCAGTGATGTGAGCGAGCCCTCGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114158.9 ENSMUST00000202434.4 |
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| CDS GCA 72 bp | GGCCGAGTGGCAGGTCGCGGGGCGCAGGACATCGGATaGGCAACGCTGGCGGTCTGTCATCGCGATCGCCTG | + |
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Preference number: 6 (lower is better) Translates to: GRVAGRGAQDIG*ATLAVCHRDRL Trigger: CAGGCGATCGCGATGACAGACCGCCAGCGTTGCGCATCCGATGTCCTGCGCCCCGCGACCTGCCACTCGGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114158.9 ENSMUST00000202434.4 |
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| CDS CCA 72 bp | GAGGAGCCGGTCACTCTGGCCATTGTCCCGGCCGAGTaGCAGGTCGCGGGGCGCAGGACATCGGATGCGCAA | + |
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Preference number: 6 (lower is better) Translates to: EEPVTLAIVPAE*QVAGRRTSDAQ Trigger: TTGCGCATCCGATGTCCTGCGCCCCGCGACCTGCCACTCGGCCGGGACAATGGCCAGAGTGACCGGCTCCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114158.9 ENSMUST00000202434.4 |
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| CDS CCA 72 bp | CAGGTCGCGGGGCGCAGGACATCGGATGCGCAACGCTaGCGGTCTGTCATCGCGATCGCCTGGCGAACTGAC | + |
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Preference number: 6 (lower is better) Translates to: QVAGRRTSDAQR*RSVIAIAWRTD Trigger: GTCAGTTCGCCAGGCGATCGCGATGACAGACCGCCAGCGTTGCGCATCCGATGTCCTGCGCCCCGCGACCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114158.9 ENSMUST00000202434.4 |
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| CDS CCA 72 bp | GATGCGCAACGCTGGCGGTCTGTCATCGCGATCGCCTaGCGAACTGACAGCAGAGCCCGAGGGCTCGCTCAC | + |
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Preference number: 6 (lower is better) Translates to: DAQRWRSVIAIA*RTDSRARGLAH Trigger: GTGAGCGAGCCCTCGGGCTCTGCTGTCAGTTCGCCAGGCGATCGCGATGACAGACCGCCAGCGTTGCGCATC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114158.9 ENSMUST00000202434.4 |
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| CDS TCA 72 bp | ACGCTGGCGGTCTGTCATCGCGATCGCCTGGCGAACTaGCAGCAGAGCCCGAGGGCTCGCTCACATCACTGG | + |
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Preference number: 6 (lower is better) Translates to: TLAVCHRDRLAN*QQSPRARSHHW Trigger: CCAGTGATGTGAGCGAGCCCTCGGGCTCTGCTGTCAGTTCGCCAGGCGATCGCGATGACAGACCGCCAGCGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114158.9 ENSMUST00000202434.4 |
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| CDS TCA 72 bp | CCTCGGGTCTGCTCAGAGCATGACCCTCGGGACCCGTaGTGCCCATCTCCAGGATCCGTTTTTGTTCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: PRVCSEHDPRDP*CPSPGSVFVPE Trigger: CTCAGGAACAAAAACGGATCCTGGAGATGGGCATCACGGGTCCCGAGGGTCATGCTCTGAGCAGACCCGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| CDS CAA 90 bp | TGGAGGTTCCGGATGGGTGGGGGTTGGTGTTTAGAAGGCGAGGATTaGGCAGAAGGAGCAGGAGCAGCATGTTTGGGTGTAGCTGGCACC | + |
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Preference number: 6 (lower is better) Translates to: WRFRMGGGWCLEGED*AEGAGAACLGVAGT Trigger: GGTGCCAGCTACACCCAAACATGCTGCTCCTGCTCCTTCTGCCAAATCCTCGCCTTCTAAACACCAACCCCCACCCATCCGGAACCTCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| CDS CCA 72 bp | TCTGATCCTGACACGCTGGTAGAGATGCTCTGGGAATaGCTTCCGAGGGATGAAGCGGCCCATGCCCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: SDPDTLVEMLWE*LPRDEAAHALA Trigger: AGCAAGGGCATGGGCCGCTTCATCCCTCGGAAGCCATTCCCAGAGCATCTCTACCAGCGTGTCAGGATCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| CDS CCA 72 bp | CTTGCTTCTGATCCTGACACGCTGGTAGAGATGCTCTaGGAATGGCTTCCGAGGGATGAAGCGGCCCATGCC | + |
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Preference number: 6 (lower is better) Translates to: LASDPDTLVEML*EWLPRDEAAHA Trigger: GGCATGGGCCGCTTCATCCCTCGGAAGCCATTCCCAGAGCATCTCTACCAGCGTGTCAGGATCAGAAGCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| CDS CAA 90 bp | TGTTTAGAAGGCGAGGATTTGGCAGAAGGAGCAGGAGCAGCATGTTaGGGTGTAGCTGGCACCTCGTACACAGGCCCATCGTACATGCCC | + |
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Preference number: 6 (lower is better) Translates to: CLEGEDLAEGAGAAC*GVAGTSYTGPSYMP Trigger: GGGCATGTACGATGGGCCTGTGTACGAGGTGCCAGCTACACCCAAACATGCTGCTCCTGCTCCTTCTGCCAAATCCTCGCCTTCTAAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| CDS CAA 72 bp | GGGAATGGCTTCCGAGGGATGAAGCGGCCCATGCCCTaGCTGACACTGATGTTTCCATCCTCAAAGACAATC | + |
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Preference number: 6 (lower is better) Translates to: GNGFRGMKRPMP*LTLMFPSSKTI Trigger: GATTGTCTTTGAGGATGGAAACATCAGTGTCAGCAAGGGCATGGGCCGCTTCATCCCTCGGAAGCCATTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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| CDS CAA 72 bp | GGCGCCACAATGCGGTGGCCTGTACGCCTTGGATTGTaGTCATCTATCTGGGCACCTGATAAGCTGAAGTTG | + |
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Preference number: 6 (lower is better) Translates to: GATMRWPVRLGL*SSIWAPDKLKL Trigger: CAACTTCAGCTTATCAGGTGCCCAGATAGATGACAACAATCCAAGGCGTACAGGCCACCGCATTGTGGCGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031004.11 ENSMUST00000114158.9 |
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