Pregenerated sensors for CRK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017776Ensembl transcript IDs: ENSMUST00000017920.14, ENSMUST00000093115.4, ENSMUST00000108425.8, ENSMUST00000108426.8, ENSMUST00000147718.2
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
3UTR CCA 90 bp | CCCCACTGGGTAATATTCACACAGTGCATGATTACGTCATGGGAGTaGGGAACAGTCTGCTGCCACTTGACAGTATGGATTCAGGATGAA | + |
Preference number: 1 (lower is better) Translates to: PHWVIFTQCMITSWE*GTVCCHLTVWIQDE Trigger: TTCATCCTGAATCCATACTGTCAAGTGGCAGCAGACTGTTCCCCACTCCCATGACGTAATCATGCACTGTGTGAATATTACCCAGTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR CCA 90 bp | ATGCAACCCCACTGGGTAATATTCACACAGTGCATGATTACGTCATaGGAGTGGGGAACAGTCTGCTGCCACTTGACAGTATGGATTCAG | + |
Preference number: 1 (lower is better) Translates to: MQPHWVIFTQCMITS*EWGTVCCHLTVWIQ Trigger: CTGAATCCATACTGTCAAGTGGCAGCAGACTGTTCCCCACTCCCATGACGTAATCATGCACTGTGTGAATATTACCCAGTGGGGTTGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR CCA 90 bp | AAGTTGCCTAAGCTGACCTTGAACTCCTGGGTTCAAGGAATCCCATaGCTTCAGAAGTCCTGGAATTATCAGCACAGGCCACCATACCTT | + |
Preference number: 1 (lower is better) Translates to: KLPKLTLNSWVQGIP*LQKSWNYQHRPPYL Trigger: AAGGTATGGTGGCCTGTGCTGATAATTCCAGGACTTCTGAAGCCATGGGATTCCTTGAACCCAGGAGTTCAAGGTCAGCTTAGGCAACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108425.8 |
||
3UTR CCA 90 bp | GAGTCAGATGTCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCAGGGCCTTCGGAAGAGCAGTCAATGCTCTTA | + |
Preference number: 1 (lower is better) Translates to: ESDVITDGCEPPCGC*DLNSGPSEEQSMLL Trigger: TAAGAGCATTGACTGCTCTTCCGAAGGCCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGACATCTGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147718.2 |
||
3UTR TCA 90 bp | AACAGATTGTTCCATCTGTCAGCAAACTGTCGAGCTATACTCAGCTaGAGTCCTCATCGGGATTCTGTTGATCCAGCAGACGGACATGTG | + |
Preference number: 1 (lower is better) Translates to: NRLFHLSANCRAILS*SPHRDSVDPADGHV Trigger: CACATGTCCGTCTGCTGGATCAACAGAATCCCGATGAGGACTTCAGCTGAGTATAGCTCGACAGTTTGCTGACAGATGGAACAATCTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108425.8 ENSMUST00000108426.8 |
||
3UTR GCA 90 bp | GTATCCACAGCAGCATTCTCACAACAGAGAATGCAGTCTCAAGTTTaGAGAGTTCCCTATCACACTGCCATCTTACACTCACAGAGACCC | + |
Preference number: 1 (lower is better) Translates to: VSTAAFSQQRMQSQV*RVPYHTAILHSQRP Trigger: GGGTCTCTGTGAGTGTAAGATGGCAGTGTGATAGGGAACTCTGCAAACTTGAGACTGCATTCTCTGTTGTGAGAATGCTGCTGTGGATAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108425.8 |
||
3UTR CCA 90 bp | ATTACGTCATGGGAGTGGGGAACAGTCTGCTGCCACTTGACAGTATaGATTCAGGATGAAAACAGAACCTCTGAAGAAATCAGGGTCAGC | + |
Preference number: 1 (lower is better) Translates to: ITSWEWGTVCCHLTV*IQDENRTSEEIRVS Trigger: GCTGACCCTGATTTCTTCAGAGGTTCTGTTTTCATCCTGAATCCATACTGTCAAGTGGCAGCAGACTGTTCCCCACTCCCATGACGTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR GCA 90 bp | TTCACACAGTGCATGATTACGTCATGGGAGTGGGGAACAGTCTGCTaGCACTTGACAGTATGGATTCAGGATGAAAACAGAACCTCTGAA | + |
Preference number: 1 (lower is better) Translates to: FTQCMITSWEWGTVC*HLTVWIQDENRTSE Trigger: TTCAGAGGTTCTGTTTTCATCCTGAATCCATACTGTCAAGTGGCAGCAGACTGTTCCCCACTCCCATGACGTAATCATGCACTGTGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR CCA 90 bp | GTATACAGGAGTCTTGCTAAGTTGCCTAAGCTGACCTTGAACTCCTaGGTTCAAGGAATCCCATGGCTTCAGAAGTCCTGGAATTATCAG | + |
Preference number: 1 (lower is better) Translates to: VYRSLAKLPKLTLNS*VQGIPWLQKSWNYQ Trigger: CTGATAATTCCAGGACTTCTGAAGCCATGGGATTCCTTGAACCCAGGAGTTCAAGGTCAGCTTAGGCAACTTAGCAAGACTCCTGTATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108425.8 |
||
3UTR TCA 90 bp | GAGGGCAAAGTTTGGCCCTTGATACCTTCTATAGGATACAGTAAGTaGTTGGTCCTTCCACTCCAAGTAGAATCTGAGAACTTTGAGCAT | + |
Preference number: 1 (lower is better) Translates to: EGKVWPLIPSIGYSK*LVLPLQVESENFEH Trigger: ATGCTCAAAGTTCTCAGATTCTACTTGGAGTGGAAGGACCAATCACTTACTGTATCCTATAGAAGGTATCAAGGGCCAAACTTTGCCCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR GCA 90 bp | AGTATAAGGTGTTTCTATTGGTCACCTACACCAGAGACCAGCAAGTaGCTTTATCACCTGAAAGTCTCATGTTACAGTCTAAAGAAACCC | + |
Preference number: 1 (lower is better) Translates to: SIRCFYWSPTPETSK*LYHLKVSCYSLKKP Trigger: GGGTTTCTTTAGACTGTAACATGAGACTTTCAGGTGATAAAGGCACTTGCTGGTCTCTGGTGTAGGTGACCAATAGAAACACCTTATACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR TCA 90 bp | ATTGACTGTGCATTTGGATTTACACAATCTATGCTAACTGAAAAGTaGAACAAGCAGTCAGGTGCAGTAAGTCACGTGCTACAAACCTGT | + |
Preference number: 1 (lower is better) Translates to: IDCAFGFTQSMLTEK*NKQSGAVSHVLQTC Trigger: ACAGGTTTGTAGCACGTGACTTACTGCACCTGACTGCTTGTTTCACTTTTCAGTTAGCATAGATTGTGTAAATCCAAATGCACAGTCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR TCA 90 bp | ACTTGCTATTTTTGGAAGATATTTGTAAGAAGTCCTTTGATCTCTTaGGGTCCAATAACTGCTACACCCAGCCAAATCCAACCAAACAGT | + |
Preference number: 1 (lower is better) Translates to: TCYFWKIFVRSPLIS*GPITATPSQIQPNS Trigger: ACTGTTTGGTTGGATTTGGCTGGGTGTAGCAGTTATTGGACCTCAAGAGATCAAAGGACTTCTTACAAATATCTTCCAAAAATAGCAAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR-3UTR TCA 90 bp | GGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGGCCTTCGGAAGAGAATGCTCTTAACCGCTaGGCCATCTGTCCAGCCCAA | + |
Preference number: 2 (lower is better) Translates to: GCEPPCGCWDLNSGPSEENALNR*AICPAQ Trigger: TTGGGCTGGACAGATGGCTCAGCGGTTAAGAGCATT...CTCTTCCGAAGGCCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147718.2 |
||
3UTR-3UTR CCA 90 bp | AAGTATAAGGTGTTTCTATTGGTCACCTACACCAGAGACCAGCAAGTGCCTTTACCTACGATGCCCCCTTaGGGGAAGGCAGAGAGCTGG | + |
Preference number: 2 (lower is better) Translates to: KYKVFLLVTYTRDQQVPLPTMPP*GKAESW Trigger: CCAGCTCTCTGCCTTCCCCCAAGGGGGCATCGTAGG...TAAAGGCACTTGCTGGTCTCTGGTGTAGGTGACCAATAGAAACACCTTATACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR-3UTR TCA 90 bp | CAGTGCATGATTACGTCATGGGAGTGGGGAACAGTCTGCTGCCACTTGACAGTACAGCTTTCCACAGGTTaGTCTGTTTTGCCCAAAAGA | + |
Preference number: 2 (lower is better) Translates to: QCMITSWEWGTVCCHLTVQLSTG*SVLPKR Trigger: TCTTTTGGGCAAAACAGATCAACCTGTGGAAAGCTG...TACTGTCAAGTGGCAGCAGACTGTTCCCCACTCCCATGACGTAATCATGCACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR-3UTR TCA 90 bp | ACTGCCATCTTACACTCACAGAGACCCATTTCCAGGCAAGTCTGGTGTTCTCTGTGTGTGAATGGGAAGTaGCCTCGTTTGCCATTACAC | + |
Preference number: 2 (lower is better) Translates to: TAILHSQRPISRQVWCSLCVNGK*PRLPLH Trigger: GTGTAATGGCAAACGAGGTCACTTCCCATTCACACA...CAGAGAACACCAGACTTGCCTGGAAATGGGTCTCTGTGAGTGTAAGATGGCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108425.8 |
||
3UTR-3UTR GCA 90 bp | CCCATTAGGATACTAGCAATCAGGAAAAATGGCCCTGCCAGATCTGTCCCATCAGTCATGGTCCATAAATaGAAATGCAACCCCACTGGG | + |
Preference number: 2 (lower is better) Translates to: PIRILAIRKNGPARSVPSVMVHK*KCNPTG Trigger: CCCAGTGGGGTTGCATTTGCATTTATGGACCATGAC...TGATGGGACAGATCTGGCAGGGCCATTTTTCCTGATTGCTAGTATCCTAATGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR CAA 90 bp | CAGTGCATGATTACGTCATGGGAGTGGGGAACAGTCTGCTGCCACTaGACAGTATGGATTCAGGATGAAAACAGAACCTCTGAAGAAATC | + |
Preference number: 2 (lower is better) Translates to: QCMITSWEWGTVCCH*TVWIQDENRTSEEI Trigger: GATTTCTTCAGAGGTTCTGTTTTCATCCTGAATCCATACTGTCAAGTGGCAGCAGACTGTTCCCCACTCCCATGACGTAATCATGCACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR CAA 90 bp | AGGTATTTAGTATACAGGAGTCTTGCTAAGTTGCCTAAGCTGACCTaGAACTCCTGGGTTCAAGGAATCCCATGGCTTCAGAAGTCCTGG | + |
Preference number: 2 (lower is better) Translates to: RYLVYRSLAKLPKLT*NSWVQGIPWLQKSW Trigger: CCAGGACTTCTGAAGCCATGGGATTCCTTGAACCCAGGAGTTCAAGGTCAGCTTAGGCAACTTAGCAAGACTCCTGTATACTAAATACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108425.8 |
||
3UTR-3UTR CCA 90 bp | ACTGCCATCTTACACTCACAGAGACCCATTTCCAGGCAAGTCTGGTGTTCTCTGTGTATAGATGGCAATTaGGGGGAAACAGATTGTTCC | + |
Preference number: 2 (lower is better) Translates to: TAILHSQRPISRQVWCSLCIDGN*GETDCS Trigger: GGAACAATCTGTTTCCCCCCAATTGCCATCTATACA...CAGAGAACACCAGACTTGCCTGGAAATGGGTCTCTGTGAGTGTAAGATGGCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108425.8 |
||
3UTR-3UTR CCA 90 bp | TGTGCTAGTCACTTCAGTCACATGATTTGGTATATGTTCAATGAATGCAAATTCCCTACGATGCCCCCTTaGGGGAAGGCAGAGAGCTGG | + |
Preference number: 2 (lower is better) Translates to: CASHFSHMIWYMFNECKFPTMPP*GKAESW Trigger: CCAGCTCTCTGCCTTCCCCCAAGGGGGCATCGTAGG...GAATTTGCATTCATTGAACATATACCAAATCATGTGACTGAAGTGACTAGCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR-3UTR TCA 90 bp | ACACGTGCTCAGCAATGTGCTAGTCACTTCAGTCACATGATTTGGTATATGTTCCAGTCTGCTGCCACTTaGCAGTATGGATTCAGGATG | + |
Preference number: 2 (lower is better) Translates to: TRAQQCASHFSHMIWYMFQSAAT*QYGFRM Trigger: CATCCTGAATCCATACTGTCAAGTGGCAGCAGACTG...GAACATATACCAAATCATGTGACTGAAGTGACTAGCACATTGCTGAGCACGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR-3UTR TCA 90 bp | TTTGAAACAAGGTCTCACTTTCTAACTCCTGACTGTTCTGGAAGTAGCTCTGTAGTCCCATCAGTAAGGTaGGTCTTGAGCTGTGGTAGC | + |
Preference number: 2 (lower is better) Translates to: FETRSHFLTPDCSGSSSVVPSVR*VLSCGS Trigger: GCTACCACAGCTCAAGACTCACCTTACTGATGGGAC...TACAGAGCTACTTCCAGAACAGTCAGGAGTTAGAAAGTGAGACCTTGTTTCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR-3UTR CCA 90 bp | TGTCAGCAAACTGTCGAGCTATACTCAGCTGAAGTCCTCATCGGGATTCTGTTGTGTATAGATGGCAATTaGGGGGAAACAGATTGTTCC | + |
Preference number: 2 (lower is better) Translates to: CQQTVELYSAEVLIGILLCIDGN*GETDCS Trigger: GGAACAATCTGTTTCCCCCCAATTGCCATCTATACA...CAACAGAATCCCGATGAGGACTTCAGCTGAGTATAGCTCGACAGTTTGCTGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108425.8 ENSMUST00000108426.8 |
||
3UTR-3UTR CCA 90 bp | AAGTATAAGGTGTTTCTATTGGTCACCTACACCAGAGACCAGCAAGTGCCTTTATGCATGATTACGTCATaGGAGTGGGGAACAGTCTGC | + |
Preference number: 2 (lower is better) Translates to: KYKVFLLVTYTRDQQVPLCMITS*EWGTVC Trigger: GCAGACTGTTCCCCACTCCCATGACGTAATCATGCA...TAAAGGCACTTGCTGGTCTCTGGTGTAGGTGACCAATAGAAACACCTTATACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR-3UTR TCA 90 bp | TTTGAAACAAGGTCTCACTTTCTAACTCCTGACTGTTCTGGAAGTAGCTCTGTAAGACCAGGTTGGTCTTaGACTCAGAGATCCACTTGC | + |
Preference number: 2 (lower is better) Translates to: FETRSHFLTPDCSGSSSVRPGWS*TQRSTC Trigger: GCAAGTGGATCTCTGAGTTCAAGACCAACCTGGTCT...TACAGAGCTACTTCCAGAACAGTCAGGAGTTAGAAAGTGAGACCTTGTTTCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR-3UTR CCA 90 bp | AACTTGAGCCACAGCTCCAATACTGGAGTGAGTAGTGTCAATGTGGAGTGCACTTGCCACTTGACAGTATaGATTCAGGATGAAAACAGA | + |
Preference number: 2 (lower is better) Translates to: NLSHSSNTGVSSVNVECTCHLTV*IQDENR Trigger: TCTGTTTTCATCCTGAATCCATACTGTCAAGTGGCA...AGTGCACTCCACATTGACACTACTCACTCCAGTATTGGAGCTGTGGCTCAAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108425.8 |
||
3UTR-3UTR TCA 90 bp | CCCATTAGGATACTAGCAATCAGGAAAAATGGCCCTGCCAGATCTGTCCCATCATATGGTAAATACAAGTaGGAATGGAGTAGTTCAGTC | + |
Preference number: 2 (lower is better) Translates to: PIRILAIRKNGPARSVPSYGKYK*EWSSSV Trigger: GACTGAACTACTCCATTCTCACTTGTATTTACCATA...TGATGGGACAGATCTGGCAGGGCCATTTTTCCTGATTGCTAGTATCCTAATGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR-3UTR CCA 90 bp | ATGTTTCCTAACAGTAGTGTCATACTTTCTAGAGATCTTATAGCATACCCACCAATTACGTCATGGGAGTaGGGAACAGTCTGCTGCCAC | + |
Preference number: 2 (lower is better) Translates to: MFPNSSVILSRDLIAYPPITSWE*GTVCCH Trigger: GTGGCAGCAGACTGTTCCCCACTCCCATGACGTAAT...TGGTGGGTATGCTATAAGATCTCTAGAAAGTATGACACTACTGTTAGGAAACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108425.8 |
||
3UTR-3UTR CCA 90 bp | CCCATTAGGATACTAGCAATCAGGAAAAATGGCCCTGCCAGATCTGTCCCATCAGTCATACAATGGTCATaGTCCATAAATGCAAATGCA | + |
Preference number: 2 (lower is better) Translates to: PIRILAIRKNGPARSVPSVIQWS*SINANA Trigger: TGCATTTGCATTTATGGACCATGACCATTGTATGAC...TGATGGGACAGATCTGGCAGGGCCATTTTTCCTGATTGCTAGTATCCTAATGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR-3UTR CCA 90 bp | ACACGTGCTCAGCAATGTGCTAGTCACTTCAGTCACATGATTTGGTATATGTTCAAACCCTATAATTTGTaGCCTCAGAGGCCTAGTCTC | + |
Preference number: 2 (lower is better) Translates to: TRAQQCASHFSHMIWYMFKPYNL*PQRPSL Trigger: GAGACTAGGCCTCTGAGGCCACAAATTATAGGGTTT...GAACATATACCAAATCATGTGACTGAAGTGACTAGCACATTGCTGAGCACGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR-3UTR TCA 90 bp | AGCATTCAAATCAGTTGTGACGATGATTTTCTAAGAAGTGTTTTCGATGCCATAGTCCCATCAGTAAGGTaGGTCTTGAGCTGTGGTAGC | + |
Preference number: 2 (lower is better) Translates to: SIQISCDDDFLRSVFDAIVPSVR*VLSCGS Trigger: GCTACCACAGCTCAAGACTCACCTTACTGATGGGAC...TATGGCATCGAAAACACTTCTTAGAAAATCATCGTCACAACTGATTTGAATGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR-3UTR TCA 90 bp | AAAAGATCCCAGGTAACAGAATGCTTATATAAACTAGACTGCTTTGACACCTGTTCATCGGGATTCTGTTaGTCCAGCAGACGGACATGT | + |
Preference number: 2 (lower is better) Translates to: KRSQVTECLYKLDCFDTCSSGFC*SSRRTC Trigger: ACATGTCCGTCTGCTGGATCAACAGAATCCCGATGA...ACAGGTGTCAAAGCAGTCTAGTTTATATAAGCATTCTGTTACCTGGGATCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108425.8 ENSMUST00000108426.8 |
||
3UTR-3UTR TCA 90 bp | GACGATGATTTTCTAAGAAGTGTTTTCGATGCCATAATTTCAGGAACAGATTCTACTGACCACCTATTATaGGCTCAGAACTGGGCCAAC | + |
Preference number: 2 (lower is better) Translates to: DDDFLRSVFDAIISGTDSTDHLL*AQNWAN Trigger: GTTGGCCCAGTTCTGAGCTCATAATAGGTGGTCAGT...AGAATCTGTTCCTGAAATTATGGCATCGAAAACACTTCTTAGAAAATCATCGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR-3UTR GCA 90 bp | TTTGAAACAAGGTCTCACTTTCTAACTCCTGACTGTTCTGGAAGTAGCTCTGTACAGGTTGATCTGTTTTaGCCAAAAGAAAGGAGGCAA | + |
Preference number: 2 (lower is better) Translates to: FETRSHFLTPDCSGSSSVQVDLF*PKERRQ Trigger: TTGCCTCCTTTCTTTTGGGCAAAACAGATCAACCTG...TACAGAGCTACTTCCAGAACAGTCAGGAGTTAGAAAGTGAGACCTTGTTTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR-3UTR GCA 90 bp | CAATTTCAGTTTACTTTGCTCTGTGACAATGTACATACGCATCTGACTAGGATTGTCATGGTCCATAAATaGAAATGCAACCCCACTGGG | + |
Preference number: 2 (lower is better) Translates to: QFQFTLLCDNVHTHLTRIVMVHK*KCNPTG Trigger: CCCAGTGGGGTTGCATTTGCATTTATGGACCATGAC...AATCCTAGTCAGATGCGTATGTACATTGTCACAGAGCAAAGTAAACTGAAATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR-3UTR GCA 90 bp | TTTGAAACAAGGTCTCACTTTCTAACTCCTGACTGTTCTGGAAGTAGCTCTGTACACGCTTCTGCACTCTaGTCATTCTTTCGTACAAAA | + |
Preference number: 2 (lower is better) Translates to: FETRSHFLTPDCSGSSSVHASAL*SFFRTK Trigger: TTTTGTACGAAAGAATGAGCAGAGTGCAGAAGCGTG...TACAGAGCTACTTCCAGAACAGTCAGGAGTTAGAAAGTGAGACCTTGTTTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR-3UTR GCA 90 bp | GACGATGATTTTCTAAGAAGTGTTTTCGATGCCATAATTTCAGGAACAGATTCTACTCAGAGATCCACTTaGCTTTGTCTCCCAAGGGCT | + |
Preference number: 2 (lower is better) Translates to: DDDFLRSVFDAIISGTDSTQRST*LCLPRA Trigger: AGCCCTTGGGAGACAAAGGCAAGTGGATCTCTGAGT...AGAATCTGTTCCTGAAATTATGGCATCGAAAACACTTCTTAGAAAATCATCGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR-3UTR TCA 90 bp | CAATTTCAGTTTACTTTGCTCTGTGACAATGTACATACGCATCTGACTAGGATTAATCAGGGTCAGCAGTaGGTAACATTCTTTTCCTGC | + |
Preference number: 2 (lower is better) Translates to: QFQFTLLCDNVHTHLTRINQGQQ*VTFFSC Trigger: GCAGGAAAAGAATGTTACTCACTGCTGACCCTGATT...AATCCTAGTCAGATGCGTATGTACATTGTCACAGAGCAAAGTAAACTGAAATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR-3UTR TCA 90 bp | TTTGAAACAAGGTCTCACTTTCTAACTCCTGACTGTTCTGGAAGTAGCTCTGTATTAGGGAAACAGGATTaGCTGTGCATTTGGATTTAC | + |
Preference number: 2 (lower is better) Translates to: FETRSHFLTPDCSGSSSVLGKQD*LCIWIY Trigger: GTAAATCCAAATGCACAGTCAATCCTGTTTCCCTAA...TACAGAGCTACTTCCAGAACAGTCAGGAGTTAGAAAGTGAGACCTTGTTTCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR-3UTR GCA 90 bp | GGACAAAGGAGAACCCAAATGAAGGCAATTTATAGTGTAATATACTTCACCAACGTGCTCTGTACATCCTaGTTCTCATCTGGAATGAAG | + |
Preference number: 2 (lower is better) Translates to: GQRRTQMKAIYSVIYFTNVLCTS*FSSGMK Trigger: CTTCATTCCAGATGAGAAGCAGGATGTACAGAGCAC...GTTGGTGAAGTATATTACACTATAAATTGCCTTCATTTGGGTTCTCCTTTGTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR-3UTR CCA 90 bp | TACACACGTGCTCAGCAATGTGCTAGTCACTTCAGTCACATGATTTGGTATATGGTCATACAATGGTCATaGTCCATAAATGCAAATGCA | + |
Preference number: 2 (lower is better) Translates to: YTRAQQCASHFSHMIWYMVIQWS*SINANA Trigger: TGCATTTGCATTTATGGACCATGACCATTGTATGAC...CATATACCAAATCATGTGACTGAAGTGACTAGCACATTGCTGAGCACGTGTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR-3UTR CCA 90 bp | CAATTTCAGTTTACTTTGCTCTGTGACAATGTACATACGCATCTGACTAGGATTTGTATAGATGGCAATTaGGGGGAAACAGATTGTTCC | + |
Preference number: 2 (lower is better) Translates to: QFQFTLLCDNVHTHLTRICIDGN*GETDCS Trigger: GGAACAATCTGTTTCCCCCCAATTGCCATCTATACA...AATCCTAGTCAGATGCGTATGTACATTGTCACAGAGCAAAGTAAACTGAAATTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR CAA 90 bp | TATTTTTCTAAAATGAGGTTCAAAGCAAAGTATAAGGTGTTTCTATaGGTCACCTACACCAGAGACCAGCAAGTGCCTTTATCACCTGAA | + |
Preference number: 2 (lower is better) Translates to: YFSKMRFKAKYKVFL*VTYTRDQQVPLSPE Trigger: TTCAGGTGATAAAGGCACTTGCTGGTCTCTGGTGTAGGTGACCAATAGAAACACCTTATACTTTGCTTTGAACCTCATTTTAGAAAAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR-3UTR GCA 90 bp | TGTGCTAGTCACTTCAGTCACATGATTTGGTATATGTTCAATGAATGCAAATTCCAGGTTGATCTGTTTTaGCCAAAAGAAAGGAGGCAA | + |
Preference number: 2 (lower is better) Translates to: CASHFSHMIWYMFNECKFQVDLF*PKERRQ Trigger: TTGCCTCCTTTCTTTTGGGCAAAACAGATCAACCTG...GAATTTGCATTCATTGAACATATACCAAATCATGTGACTGAAGTGACTAGCACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR-3UTR GCA 90 bp | TGTGCTAGTCACTTCAGTCACATGATTTGGTATATGTTCAATGAATGCAAATTCCACGCTTCTGCACTCTaGTCATTCTTTCGTACAAAA | + |
Preference number: 2 (lower is better) Translates to: CASHFSHMIWYMFNECKFHASAL*SFFRTK Trigger: TTTTGTACGAAAGAATGAGCAGAGTGCAGAAGCGTG...GAATTTGCATTCATTGAACATATACCAAATCATGTGACTGAAGTGACTAGCACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR-3UTR GCA 90 bp | TTTGAAACAAGGTCTCACTTTCTAACTCCTGACTGTTCTGGAAGTAGCTCTGTAAAGAAGTGTTTTCGATaGCATAATTTCAGGAACAGA | + |
Preference number: 2 (lower is better) Translates to: FETRSHFLTPDCSGSSSVKKCFR*HNFRNR Trigger: TCTGTTCCTGAAATTATGGCATCGAAAACACTTCTT...TACAGAGCTACTTCCAGAACAGTCAGGAGTTAGAAAGTGAGACCTTGTTTCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR-3UTR TCA 90 bp | CAATTTCAGTTTACTTTGCTCTGTGACAATGTACATACGCATCTGACTAGGATTTATGGTAAATACAAGTaGGAATGGAGTAGTTCAGTC | + |
Preference number: 2 (lower is better) Translates to: QFQFTLLCDNVHTHLTRIYGKYK*EWSSSV Trigger: GACTGAACTACTCCATTCTCACTTGTATTTACCATA...AATCCTAGTCAGATGCGTATGTACATTGTCACAGAGCAAAGTAAACTGAAATTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR-3UTR TCA 90 bp | GGACAAAGGAGAACCCAAATGAAGGCAATTTATAGTGTAATATACTTCACCAACAGTTTATCCACTGAGTaGATCCAATACTGGCTTAAA | + |
Preference number: 2 (lower is better) Translates to: GQRRTQMKAIYSVIYFTNSLSTE*IQYWLK Trigger: TTTAAGCCAGTATTGGATTCACTCAGTGGATAAACT...GTTGGTGAAGTATATTACACTATAAATTGCCTTCATTTGGGTTCTCCTTTGTCC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR CAA 90 bp | TGCAGAAGTGATTATATAAAACATAGCAGCCAATTTCAGTTTACTTaGCTCTGTGACAATGTACATACGCATCTGACTAGGATTATAGCA | + |
Preference number: 2 (lower is better) Translates to: CRSDYIKHSSQFQFT*LCDNVHTHLTRIIA Trigger: TGCTATAATCCTAGTCAGATGCGTATGTACATTGTCACAGAGCAAAGTAAACTGAAATTGGCTGCTATGTTTTATATAATCACTTCTGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR-3UTR TCA 90 bp | TGTGCTAGTCACTTCAGTCACATGATTTGGTATATGTTCAATGAATGCAAATTCCTTAAAGCTATGCACTaGATAAAGTGCTCTGTACAT | + |
Preference number: 2 (lower is better) Translates to: CASHFSHMIWYMFNECKFLKAMH*IKCSVH Trigger: ATGTACAGAGCACTTTATTCAGTGCATAGCTTTAAG...GAATTTGCATTCATTGAACATATACCAAATCATGTGACTGAAGTGACTAGCACA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR-3UTR GCA 90 bp | CAATTTCAGTTTACTTTGCTCTGTGACAATGTACATACGCATCTGACTAGGATTAAGAAGTGTTTTCGATaGCATAATTTCAGGAACAGA | + |
Preference number: 2 (lower is better) Translates to: QFQFTLLCDNVHTHLTRIKKCFR*HNFRNR Trigger: TCTGTTCCTGAAATTATGGCATCGAAAACACTTCTT...AATCCTAGTCAGATGCGTATGTACATTGTCACAGAGCAAAGTAAACTGAAATTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR GCA 72 bp | GACGGGTGGTATGGACACACAGAAACGCATCATCTCTaGTGCTGTTCCTCCCCTAGGACTTTCCCTGAGCAA | + |
Preference number: 3 (lower is better) Translates to: DGWYGHTETHHL*CCSSPRTFPEQ Trigger: TTGCTCAGGGAAAGTCCTAGGGGAGGAACAGCAGCAGAGATGATGCGTTTCTGTGTGTCCATACCACCCGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108425.8 |
||
3UTR-3UTR CAA 90 bp | ACTGCCATCTTACACTCACAGAGACCCATTTCCAGGCAAGTCTGGTGTTCTCTGAACTCAGAGATCCACTaGCCTTTGTCTCCCAAGGGC | + |
Preference number: 3 (lower is better) Translates to: TAILHSQRPISRQVWCSLNSEIH*PLSPKG Trigger: GCCCTTGGGAGACAAAGGCAAGTGGATCTCTGAGTT...CAGAGAACACCAGACTTGCCTGGAAATGGGTCTCTGTGAGTGTAAGATGGCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108425.8 |
||
3UTR GCA 72 bp | GATGTCATTACAGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCAGGGCCTTCGGAAGAGCAG | + |
Preference number: 3 (lower is better) Translates to: DVITDGCEPPCG*WDLNSGPSEEQ Trigger: CTGCTCTTCCGAAGGCCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGACATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147718.2 |
||
3UTR-3UTR CAA 90 bp | TTTGAAACAAGGTCTCACTTTCTAACTCCTGACTGTTCTGGAAGTAGCTCTGTAACCTACGATGCCCCCTaGGGGGAAGGCAGAGAGCTG | + |
Preference number: 3 (lower is better) Translates to: FETRSHFLTPDCSGSSSVTYDAP*GEGREL Trigger: CAGCTCTCTGCCTTCCCCCAAGGGGGCATCGTAGGT...TACAGAGCTACTTCCAGAACAGTCAGGAGTTAGAAAGTGAGACCTTGTTTCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR CCA 72 bp | AAGCTGACCTTGAACTCCTGGGTTCAAGGAATCCCATaGCTTCAGAAGTCCTGGAATTATCAGCACAGGCCA | + |
Preference number: 3 (lower is better) Translates to: KLTLNSWVQGIP*LQKSWNYQHRP Trigger: TGGCCTGTGCTGATAATTCCAGGACTTCTGAAGCCATGGGATTCCTTGAACCCAGGAGTTCAAGGTCAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108425.8 |
||
3UTR CCA 72 bp | AGTCTTGCTAAGTTGCCTAAGCTGACCTTGAACTCCTaGGTTCAAGGAATCCCATGGCTTCAGAAGTCCTGG | + |
Preference number: 3 (lower is better) Translates to: SLAKLPKLTLNS*VQGIPWLQKSW Trigger: CCAGGACTTCTGAAGCCATGGGATTCCTTGAACCCAGGAGTTCAAGGTCAGCTTAGGCAACTTAGCAAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108425.8 |
||
3UTR TCA 72 bp | TTCCATCTGTCAGCAAACTGTCGAGCTATACTCAGCTaGAGTCCTCATCGGGATTCTGTTGATCCAGCAGAC | + |
Preference number: 3 (lower is better) Translates to: FHLSANCRAILS*SPHRDSVDPAD Trigger: GTCTGCTGGATCAACAGAATCCCGATGAGGACTTCAGCTGAGTATAGCTCGACAGTTTGCTGACAGATGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108425.8 ENSMUST00000108426.8 |
||
3UTR CCA 72 bp | CACTGGGTAATATTCACACAGTGCATGATTACGTCATaGGAGTGGGGAACAGTCTGCTGCCACTTGACAGTA | + |
Preference number: 3 (lower is better) Translates to: HWVIFTQCMITS*EWGTVCCHLTV Trigger: TACTGTCAAGTGGCAGCAGACTGTTCCCCACTCCCATGACGTAATCATGCACTGTGTGAATATTACCCAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR-3UTR CAA 90 bp | CAATTTCAGTTTACTTTGCTCTGTGACAATGTACATACGCATCTGACTAGGATTACCTACGATGCCCCCTaGGGGGAAGGCAGAGAGCTG | + |
Preference number: 3 (lower is better) Translates to: QFQFTLLCDNVHTHLTRITYDAP*GEGREL Trigger: CAGCTCTCTGCCTTCCCCCAAGGGGGCATCGTAGGT...AATCCTAGTCAGATGCGTATGTACATTGTCACAGAGCAAAGTAAACTGAAATTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR-3UTR CAA 90 bp | AGCACAGGCCACCATACCTTGAAACTTGAGCCACAGCTCCAATACTGGAGTGAGCTTAGGGAAACAGGATaGACTGTGCATTTGGATTTA | + |
Preference number: 3 (lower is better) Translates to: STGHHTLKLEPQLQYWSELRETG*TVHLDL Trigger: TAAATCCAAATGCACAGTCAATCCTGTTTCCCTAAG...CTCACTCCAGTATTGGAGCTGTGGCTCAAGTTTCAAGGTATGGTGGCCTGTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108425.8 |
||
3UTR-3UTR CAA 90 bp | TACACACGTGCTCAGCAATGTGCTAGTCACTTCAGTCACATGATTTGGTATATGCTCATCGGGATTCTGTaGATCCAGCAGACGGACATG | + |
Preference number: 3 (lower is better) Translates to: YTRAQQCASHFSHMIWYMLIGIL*IQQTDM Trigger: CATGTCCGTCTGCTGGATCAACAGAATCCCGATGAG...CATATACCAAATCATGTGACTGAAGTGACTAGCACATTGCTGAGCACGTGTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108425.8 |
||
3UTR GCA 72 bp | GCAGCATTCTCACAACAGAGAATGCAGTCTCAAGTTTaGAGAGTTCCCTATCACACTGCCATCTTACACTCA | + |
Preference number: 3 (lower is better) Translates to: AAFSQQRMQSQV*RVPYHTAILHS Trigger: TGAGTGTAAGATGGCAGTGTGATAGGGAACTCTGCAAACTTGAGACTGCATTCTCTGTTGTGAGAATGCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108425.8 |
||
3UTR CCA 72 bp | GTAATATTCACACAGTGCATGATTACGTCATGGGAGTaGGGAACAGTCTGCTGCCACTTGACAGTATGGATT | + |
Preference number: 3 (lower is better) Translates to: VIFTQCMITSWE*GTVCCHLTVWI Trigger: AATCCATACTGTCAAGTGGCAGCAGACTGTTCCCCACTCCCATGACGTAATCATGCACTGTGTGAATATTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR-3UTR CAA 90 bp | TGTCAGCAAACTGTCGAGCTATACTCAGCTGAAGTCCTCATCGGGATTCTGTTGACACCTGTAAGAAAATaGTATAGATGGCAATTGGGG | + |
Preference number: 3 (lower is better) Translates to: CQQTVELYSAEVLIGILLTPVRK*YRWQLG Trigger: CCCCAATTGCCATCTATACAATTTTCTTACAGGTGT...CAACAGAATCCCGATGAGGACTTCAGCTGAGTATAGCTCGACAGTTTGCTGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108425.8 ENSMUST00000108426.8 |
||
3UTR-3UTR CAA 90 bp | AAGCAAAGTATAAGGTGTTTCTATTGGTCACCTACACCAGAGACCAGCAAGTGCTCAGCTTTCCACAGGTaGATCTGTTTTGCCCAAAAG | + |
Preference number: 3 (lower is better) Translates to: KQSIRCFYWSPTPETSKCSAFHR*ICFAQK Trigger: CTTTTGGGCAAAACAGATCAACCTGTGGAAAGCTGA...GCACTTGCTGGTCTCTGGTGTAGGTGACCAATAGAAACACCTTATACTTTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR-3UTR CAA 90 bp | AAGTATAAGGTGTTTCTATTGGTCACCTACACCAGAGACCAGCAAGTGCCTTTATGCCTTTTATACAACTaGCACATGATGCAGAGGGCA | + |
Preference number: 3 (lower is better) Translates to: KYKVFLLVTYTRDQQVPLCLLYN*HMMQRA Trigger: TGCCCTCTGCATCATGTGCAAGTTGTATAAAAGGCA...TAAAGGCACTTGCTGGTCTCTGGTGTAGGTGACCAATAGAAACACCTTATACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR-3UTR CAA 90 bp | AAAAGATCCCAGGTAACAGAATGCTTATATAAACTAGACTGCTTTGACACCTGTCTCATCGGGATTCTGTaGATCCAGCAGACGGACATG | + |
Preference number: 3 (lower is better) Translates to: KRSQVTECLYKLDCFDTCLIGIL*IQQTDM Trigger: CATGTCCGTCTGCTGGATCAACAGAATCCCGATGAG...ACAGGTGTCAAAGCAGTCTAGTTTATATAAGCATTCTGTTACCTGGGATCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108425.8 ENSMUST00000108426.8 |
||
3UTR TCA 72 bp | GTTTGGCCCTTGATACCTTCTATAGGATACAGTAAGTaGTTGGTCCTTCCACTCCAAGTAGAATCTGAGAAC | + |
Preference number: 3 (lower is better) Translates to: VWPLIPSIGYSK*LVLPLQVESEN Trigger: GTTCTCAGATTCTACTTGGAGTGGAAGGACCAATCACTTACTGTATCCTATAGAAGGTATCAAGGGCCAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR GCA 72 bp | TGTTTCTATTGGTCACCTACACCAGAGACCAGCAAGTaGCTTTATCACCTGAAAGTCTCATGTTACAGTCTA | + |
Preference number: 3 (lower is better) Translates to: CFYWSPTPETSK*LYHLKVSCYSL Trigger: TAGACTGTAACATGAGACTTTCAGGTGATAAAGGCACTTGCTGGTCTCTGGTGTAGGTGACCAATAGAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR-3UTR CAA 90 bp | TTTGAAACAAGGTCTCACTTTCTAACTCCTGACTGTTCTGGAAGTAGCTCTGTATCAGCTTTCCACAGGTaGATCTGTTTTGCCCAAAAG | + |
Preference number: 3 (lower is better) Translates to: FETRSHFLTPDCSGSSSVSAFHR*ICFAQK Trigger: CTTTTGGGCAAAACAGATCAACCTGTGGAAAGCTGA...TACAGAGCTACTTCCAGAACAGTCAGGAGTTAGAAAGTGAGACCTTGTTTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR CCA 72 bp | ATCTTACACTCACAGAGACCCATTTCCAGGCAAGTCTaGTGTTCTCTGTTCACAATGTGCTTCCTTTATATT | + |
Preference number: 3 (lower is better) Translates to: ILHSQRPISRQV*CSLFTMCFLYI Trigger: AATATAAAGGAAGCACATTGTGAACAGAGAACACCAGACTTGCCTGGAAATGGGTCTCTGTGAGTGTAAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108425.8 |
||
3UTR-3UTR CAA 90 bp | ACACGTGCTCAGCAATGTGCTAGTCACTTCAGTCACATGATTTGGTATATGTTCACACCTGTAAGAAAATaGTATAGATGGCAATTGGGG | + |
Preference number: 3 (lower is better) Translates to: TRAQQCASHFSHMIWYMFTPVRK*YRWQLG Trigger: CCCCAATTGCCATCTATACAATTTTCTTACAGGTGT...GAACATATACCAAATCATGTGACTGAAGTGACTAGCACATTGCTGAGCACGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR-3UTR CAA 90 bp | CAATTTCAGTTTACTTTGCTCTGTGACAATGTACATACGCATCTGACTAGGATTTGCAGAGGGCAAAGTTaGGCCCTTGATACCTTCTAT | + |
Preference number: 3 (lower is better) Translates to: QFQFTLLCDNVHTHLTRICRGQS*ALDTFY Trigger: ATAGAAGGTATCAAGGGCCAAACTTTGCCCTCTGCA...AATCCTAGTCAGATGCGTATGTACATTGTCACAGAGCAAAGTAAACTGAAATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR TCA 72 bp | GCATTTGGATTTACACAATCTATGCTAACTGAAAAGTaGAACAAGCAGTCAGGTGCAGTAAGTCACGTGCTA | + |
Preference number: 3 (lower is better) Translates to: AFGFTQSMLTEK*NKQSGAVSHVL Trigger: TAGCACGTGACTTACTGCACCTGACTGCTTGTTTCACTTTTCAGTTAGCATAGATTGTGTAAATCCAAATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR TCA 72 bp | ACATTCACCATCACACAAGGCTTAGGGAAACAGGATTaGCTGTGCATTTGGATTTACACAATCTATGCTAAC | + |
Preference number: 3 (lower is better) Translates to: TFTITQGLGKQD*LCIWIYTIYAN Trigger: GTTAGCATAGATTGTGTAAATCCAAATGCACAGTCAATCCTGTTTCCCTAAGCCTTGTGTGATGGTGAATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR-3UTR CAA 90 bp | CAATTTCAGTTTACTTTGCTCTGTGACAATGTACATACGCATCTGACTAGGATTACACCTGTAAGAAAATaGTATAGATGGCAATTGGGG | + |
Preference number: 3 (lower is better) Translates to: QFQFTLLCDNVHTHLTRITPVRK*YRWQLG Trigger: CCCCAATTGCCATCTATACAATTTTCTTACAGGTGT...AATCCTAGTCAGATGCGTATGTACATTGTCACAGAGCAAAGTAAACTGAAATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
CDS-3UTR GCA 90 bp | ACAGTGCATGATTACGTCATGGGAGTGGGGAACAGTCTGCTGCCACTTGACAGTCCGTGCCGCTGGCCCTaGAATAGCGCCACCGCCTCC | + |
Preference number: 4 (lower is better) Translates to: TVHDYVMGVGNSLLPLDSPCRWP*NSATAS Trigger: GGAGGCGGTGGCGCTATTGCAGGGCCAGCGGCACGG...ACTGTCAAGTGGCAGCAGACTGTTCCCCACTCCCATGACGTAATCATGCACTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
CDS-3UTR CCA 90 bp | GATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGGCCTTCGGAACTCCGGCCCACCCAGTaGCTGTGGGTGGGAACCCTC | + |
Preference number: 4 (lower is better) Translates to: DGCEPPCGCWDLNSGPSELRPTQ*LWVGTL Trigger: GAGGGTTCCCACCCACAGCCACTGGGTGGGCCGGAG...TTCCGAAGGCCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147718.2 |
||
CDS-3UTR TCA 90 bp | AACTTGAGCCACAGCTCCAATACTGGAGTGAGTAGTGTCAATGTGGAGTGCACTACTCCCGGCGGAGGCTaGGCGGGCGACGGAGGCACT | + |
Preference number: 4 (lower is better) Translates to: NLSHSSNTGVSSVNVECTTPGGG*AGDGGT Trigger: AGTGCCTCCGTCGCCCGCTCAGCCTCCGCCGGGAGT...AGTGCACTCCACATTGACACTACTCACTCCAGTATTGGAGCTGTGGCTCAAGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108425.8 |
||
CDS-3UTR TCA 90 bp | GAGTCAGATGTCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGACTCCCGGCGGAGGCTaGGCGGGCGACGGAGGCACT | + |
Preference number: 4 (lower is better) Translates to: ESDVITDGCEPPCGCWDLTPGGG*AGDGGT Trigger: AGTGCCTCCGTCGCCCGCTCAGCCTCCGCCGGGAGT...CAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGACATCTGACTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147718.2 |
||
CDS-3UTR GCA 90 bp | TCTGTCAGCAAACTGTCGAGCTATACTCAGCTGAAGTCCTCATCGGGATTCTGTCCGTGCCGCTGGCCCTaGAATAGCGCCACCGCCTCC | + |
Preference number: 4 (lower is better) Translates to: SVSKLSSYTQLKSSSGFCPCRWP*NSATAS Trigger: GGAGGCGGTGGCGCTATTGCAGGGCCAGCGGCACGG...ACAGAATCCCGATGAGGACTTCAGCTGAGTATAGCTCGACAGTTTGCTGACAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108425.8 ENSMUST00000108426.8 |
||
CDS-3UTR GCA 90 bp | GGTAATATTCACACAGTGCATGATTACGTCATGGGAGTGGGGAACAGTCTGCTGAGTCCCCGGGGCTGGTaGTCGAGTCCCGCACCAGGA | + |
Preference number: 4 (lower is better) Translates to: GNIHTVHDYVMGVGNSLLSPRGW*SSPAPG Trigger: TCCTGGTGCGGGACTCGAGCACCAGCCCCGGGGACT...CAGCAGACTGTTCCCCACTCCCATGACGTAATCATGCACTGTGTGAATATTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
CDS-3UTR CCA 90 bp | CCATCTGTCAGCAAACTGTCGAGCTATACTCAGCTGAAGTCCTCATCGGGATTCAACACCCCGTGCCGCTaGCCCTGCAATAGCGCCACC | + |
Preference number: 4 (lower is better) Translates to: PSVSKLSSYTQLKSSSGFNTPCR*PCNSAT Trigger: GGTGGCGCTATTGCAGGGCCAGCGGCACGGGGTGTT...GAATCCCGATGAGGACTTCAGCTGAGTATAGCTCGACAGTTTGCTGACAGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108425.8 ENSMUST00000108426.8 |
||
CDS-3UTR CCA 90 bp | ACAGTGCATGATTACGTCATGGGAGTGGGGAACAGTCTGCTGCCACTTGACAGTCTCCTATTCGGAGCCTaGAGGGACTCACTCCCGGCG | + |
Preference number: 4 (lower is better) Translates to: TVHDYVMGVGNSLLPLDSLLFGA*RDSLPA Trigger: CGCCGGGAGTGAGTCCCTCCAGGCTCCGAATAGGAG...ACTGTCAAGTGGCAGCAGACTGTTCCCCACTCCCATGACGTAATCATGCACTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
CDS-3UTR CCA 90 bp | ACCATGTGGTTGCTGGGATTTGAACTCAGGGCCTTCGGAAGAGCAGTCAATGCTCCCACCCAGTGGCTGTaGGTGGGAACCCTCCTGGTT | + |
Preference number: 4 (lower is better) Translates to: TMWLLGFELRAFGRAVNAPTQWL*VGTLLV Trigger: AACCAGGAGGGTTCCCACCCACAGCCACTGGGTGGG...AGCATTGACTGCTCTTCCGAAGGCCCTGAGTTCAAATCCCAGCAACCACATGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147718.2 |
||
CDS-3UTR CCA 90 bp | CCCATTAGGATACTAGCAATCAGGAAAAATGGCCCTGCCAGATCTGTCCCATCACTCCGGCCCACCCAGTaGCTGTGGGTGGGAACCCTC | + |
Preference number: 4 (lower is better) Translates to: PIRILAIRKNGPARSVPSLRPTQ*LWVGTL Trigger: GAGGGTTCCCACCCACAGCCACTGGGTGGGCCGGAG...TGATGGGACAGATCTGGCAGGGCCATTTTTCCTGATTGCTAGTATCCTAATGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017920.14 |
||
CDS-3UTR TCA 90 bp | ACACGTGCTCAGCAATGTGCTAGTCACTTCAGTCACATGATTTGGTATATGTTCACTCCCGGCGGAGGCTaGGCGGGCGACGGAGGCACT | + |
Preference number: 4 (lower is better) Translates to: TRAQQCASHFSHMIWYMFTPGGG*AGDGGT Trigger: AGTGCCTCCGTCGCCCGCTCAGCCTCCGCCGGGAGT...GAACATATACCAAATCATGTGACTGAAGTGACTAGCACATTGCTGAGCACGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
CDS-3UTR CCA 90 bp | CCCATTAGGATACTAGCAATCAGGAAAAATGGCCCTGCCAGATCTGTCCCATCACATAGTCCCCGGGGCTaGTGCTCGAGTCCCGCACCA | + |
Preference number: 4 (lower is better) Translates to: PIRILAIRKNGPARSVPSHSPRG*CSSPAP Trigger: TGGTGCGGGACTCGAGCACCAGCCCCGGGGACTATG...TGATGGGACAGATCTGGCAGGGCCATTTTTCCTGATTGCTAGTATCCTAATGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
CDS-3UTR CCA 90 bp | GCCACCATGTGGTTGCTGGGATTTGAACTCAGGGCCTTCGGAAGAGCAGTCAATGGGTGGGAACCCTCCTaGTTACCTCCAATCAGAGCC | + |
Preference number: 4 (lower is better) Translates to: ATMWLLGFELRAFGRAVNGWEPS*LPPIRA Trigger: GGCTCTGATTGGAGGTAACCAGGAGGGTTCCCACCC...ATTGACTGCTCTTCCGAAGGCCCTGAGTTCAAATCCCAGCAACCACATGGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147718.2 |
||
CDS-3UTR CCA 90 bp | GGTAATATTCACACAGTGCATGATTACGTCATGGGAGTGGGGAACAGTCTGCTGCCCACCCAGTGGCTGTaGGTGGGAACCCTCCTGGTT | + |
Preference number: 4 (lower is better) Translates to: GNIHTVHDYVMGVGNSLLPTQWL*VGTLLV Trigger: AACCAGGAGGGTTCCCACCCACAGCCACTGGGTGGG...CAGCAGACTGTTCCCCACTCCCATGACGTAATCATGCACTGTGTGAATATTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017920.14 |
||
CDS-3UTR TCA 90 bp | ACTGCCATCTTACACTCACAGAGACCCATTTCCAGGCAAGTCTGGTGTTCTCTGCTGCCTCCTCCTGCCTaGGAATCACTCCACTACCCT | + |
Preference number: 4 (lower is better) Translates to: TAILHSQRPISRQVWCSLLPPPA*ESLHYP Trigger: AGGGTAGTGGAGTGATTCTCAGGCAGGAGGAGGCAG...CAGAGAACACCAGACTTGCCTGGAAATGGGTCTCTGTGAGTGTAAGATGGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108425.8 |
||
CDS-3UTR TCA 90 bp | GCCACCATGTGGTTGCTGGGATTTGAACTCAGGGCCTTCGGAAGAGCAGTCAATAATCAGAGCCGATACTaGGGCGGAGGCAGGTCTATA | + |
Preference number: 4 (lower is better) Translates to: ATMWLLGFELRAFGRAVNNQSRY*GGGRSI Trigger: TATAGACCTGCCTCCGCCTCAGTATCGGCTCTGATT...ATTGACTGCTCTTCCGAAGGCCCTGAGTTCAAATCCCAGCAACCACATGGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147718.2 |
||
CDS-3UTR TCA 90 bp | AAAAGATCCCAGGTAACAGAATGCTTATATAAACTAGACTGCTTTGACACCTGTCGACCCGGCGGAGGCTaGGCGGGCGACGGAGGCACT | + |
Preference number: 4 (lower is better) Translates to: KRSQVTECLYKLDCFDTCRPGGG*AGDGGT Trigger: AGTGCCTCCGTCGCCCGCTCAGCCTCCGCCGGGTCG...ACAGGTGTCAAAGCAGTCTAGTTTATATAAGCATTCTGTTACCTGGGATCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108426.8 |
||
CDS-3UTR GCA 90 bp | TTTGAAACAAGGTCTCACTTTCTAACTCCTGACTGTTCTGGAAGTAGCTCTGTACCGTGCCGCTGGCCCTaGAATAGCGCCACCGCCTCC | + |
Preference number: 4 (lower is better) Translates to: FETRSHFLTPDCSGSSSVPCRWP*NSATAS Trigger: GGAGGCGGTGGCGCTATTGCAGGGCCAGCGGCACGG...TACAGAGCTACTTCCAGAACAGTCAGGAGTTAGAAAGTGAGACCTTGTTTCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
CDS-3UTR GCA 90 bp | GATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGGCCTTCGGAAATCACTCCACTACCCTaGCTTGATCTGGCCACTGGT | + |
Preference number: 4 (lower is better) Translates to: DGCEPPCGCWDLNSGPSEITPLP*LDLATG Trigger: ACCAGTGGCCAGATCAAGGCAGGGTAGTGGAGTGAT...TTCCGAAGGCCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147718.2 |
||
CDS-3UTR TCA 90 bp | GAGTCAGATGTCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGCTGCCTCCTCCTGCCTaGGAATCACTCCACTACCCT | + |
Preference number: 4 (lower is better) Translates to: ESDVITDGCEPPCGCWDLLPPPA*ESLHYP Trigger: AGGGTAGTGGAGTGATTCTCAGGCAGGAGGAGGCAG...CAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGACATCTGACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147718.2 |
||
CDS-3UTR CCA 90 bp | CTCTTAACCGCTGAGCCATCTGTCCAGCCCAAGAAGAACAGTATCTTAAATATACTCCTATTCGGAGCCTaGAGGGACTCACTCCCGGCG | + |
Preference number: 4 (lower is better) Translates to: LLTAEPSVQPKKNSILNILLFGA*RDSLPA Trigger: CGCCGGGAGTGAGTCCCTCCAGGCTCCGAATAGGAG...TATATTTAAGATACTGTTCTTCTTGGGCTGGACAGATGGCTCAGCGGTTAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147718.2 |
||
CDS-3UTR TCA 90 bp | TTGGTCACCTACACCAGAGACCAGCAAGTGCCTTTATCACCTGAAAGTCTCATGTCCACTACCCTGCCTTaGTCTGGCCACTGGTTCTAT | + |
Preference number: 4 (lower is better) Translates to: LVTYTRDQQVPLSPESLMSTTLP*SGHWFY Trigger: ATAGAACCAGTGGCCAGATCAAGGCAGGGTAGTGGA...CATGAGACTTTCAGGTGATAAAGGCACTTGCTGGTCTCTGGTGTAGGTGACCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
CDS-3UTR TCA 90 bp | CCCATTAGGATACTAGCAATCAGGAAAAATGGCCCTGCCAGATCTGTCCCATCAAATCAGAGCCGATACTaGGGCGGAGGCAGGTCTATA | + |
Preference number: 4 (lower is better) Translates to: PIRILAIRKNGPARSVPSNQSRY*GGGRSI Trigger: TATAGACCTGCCTCCGCCTCAGTATCGGCTCTGATT...TGATGGGACAGATCTGGCAGGGCCATTTTTCCTGATTGCTAGTATCCTAATGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
CDS-3UTR GCA 90 bp | TACGTCTTCTCATACAGGCACGGCAACTACCACCTAAAACTGCCAACTCAGAAGATCACTCCACTACCCTaGCTTGATCTGGCCACTGGT | + |
Preference number: 4 (lower is better) Translates to: YVFSYRHGNYHLKLPTQKITPLP*LDLATG Trigger: ACCAGTGGCCAGATCAAGGCAGGGTAGTGGAGTGAT...CTTCTGAGTTGGCAGTTTTAGGTGGTAGTTGCCGTGCCTGTATGAGAAGACGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
CDS-3UTR CCA 90 bp | AGGTTGATCTGTTTTGCCCAAAAGAAAGGAGGCAATGTATTTACGTCTTCTCATAACACCCCGTGCCGCTaGCCCTGCAATAGCGCCACC | + |
Preference number: 4 (lower is better) Translates to: RLICFAQKKGGNVFTSSHNTPCR*PCNSAT Trigger: GGTGGCGCTATTGCAGGGCCAGCGGCACGGGGTGTT...ATGAGAAGACGTAAATACATTGCCTCCTTTCTTTTGGGCAAAACAGATCAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
CDS-3UTR CCA 90 bp | CTCTTAACCGCTGAGCCATCTGTCCAGCCCAAGAAGAACAGTATCTTAAATATACCCAGTGGCTGTGGGTaGGAACCCTCCTGGTTACCT | + |
Preference number: 4 (lower is better) Translates to: LLTAEPSVQPKKNSILNIPSGCG*EPSWLP Trigger: AGGTAACCAGGAGGGTTCCCACCCACAGCCACTGGG...TATATTTAAGATACTGTTCTTCTTGGGCTGGACAGATGGCTCAGCGGTTAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147718.2 |
||
3UTR CAA 72 bp | GAGCTATACTCAGCTGAAGTCCTCATCGGGATTCTGTaGATCCAGCAGACGGACATGTGTGAATGGGAAGTG | + |
Preference number: 4 (lower is better) Translates to: ELYSAEVLIGIL*IQQTDMCEWEV Trigger: CACTTCCCATTCACACATGTCCGTCTGCTGGATCAACAGAATCCCGATGAGGACTTCAGCTGAGTATAGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108425.8 ENSMUST00000108426.8 |
||
CDS-3UTR TCA 90 bp | GGTAATATTCACACAGTGCATGATTACGTCATGGGAGTGGGGAACAGTCTGCTGTCATCGGGATTCTGTTaGTCCAGCAGACGGACATGT | + |
Preference number: 4 (lower is better) Translates to: GNIHTVHDYVMGVGNSLLSSGFC*SSRRTC Trigger: ACATGTCCGTCTGCTGGATCAACAGAATCCCGATGA...CAGCAGACTGTTCCCCACTCCCATGACGTAATCATGCACTGTGTGAATATTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017920.14 |
||
CDS-3UTR GCA 90 bp | TGTGCTAGTCACTTCAGTCACATGATTTGGTATATGTTCAATGAATGCAAATTCAGTCCCCGGGGCTGGTaGTCGAGTCCCGCACCAGGA | + |
Preference number: 4 (lower is better) Translates to: CASHFSHMIWYMFNECKFSPRGW*SSPAPG Trigger: TCCTGGTGCGGGACTCGAGCACCAGCCCCGGGGACT...GAATTTGCATTCATTGAACATATACCAAATCATGTGACTGAAGTGACTAGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
CDS-3UTR CCA 90 bp | AAAAGATCCCAGGTAACAGAATGCTTATATAAACTAGACTGCTTTGACACCTGTAACACCCCGTGCCGCTaGCCCTGCAATAGCGCCACC | + |
Preference number: 4 (lower is better) Translates to: KRSQVTECLYKLDCFDTCNTPCR*PCNSAT Trigger: GGTGGCGCTATTGCAGGGCCAGCGGCACGGGGTGTT...ACAGGTGTCAAAGCAGTCTAGTTTATATAAGCATTCTGTTACCTGGGATCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 ENSMUST00000108426.8 |
||
CDS-3UTR CCA 90 bp | TGTGGTTGCTGGGATTTGAACTCAGGGCCTTCGGAAGAGCAGTCAATGCTCTTATACCCTGCCTTGATCTaGCCACTGGTTCTATCAATG | + |
Preference number: 4 (lower is better) Translates to: CGCWDLNSGPSEEQSMLLYPALI*PLVLSM Trigger: CATTGATAGAACCAGTGGCCAGATCAAGGCAGGGTA...TAAGAGCATTGACTGCTCTTCCGAAGGCCCTGAGTTCAAATCCCAGCAACCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147718.2 |
||
CDS-3UTR CCA 90 bp | TACACACGTGCTCAGCAATGTGCTAGTCACTTCAGTCACATGATTTGGTATATGGGGTGGGAACCCTCCTaGTTACCTCCAATCAGAGCC | + |
Preference number: 4 (lower is better) Translates to: YTRAQQCASHFSHMIWYMGWEPS*LPPIRA Trigger: GGCTCTGATTGGAGGTAACCAGGAGGGTTCCCACCC...CATATACCAAATCATGTGACTGAAGTGACTAGCACATTGCTGAGCACGTGTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017920.14 |
||
3UTR CAA 72 bp | AGAAGTCCTGGAATTATCAGCACAGGCCACCATACCTaGAAACTTGAGCCACAGCTCCAATACTGGAGTGAG | + |
Preference number: 4 (lower is better) Translates to: RSPGIISTGHHT*KLEPQLQYWSE Trigger: CTCACTCCAGTATTGGAGCTGTGGCTCAAGTTTCAAGGTATGGTGGCCTGTGCTGATAATTCCAGGACTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108425.8 |
||
CDS-3UTR TCA 90 bp | CCCATTAGGATACTAGCAATCAGGAAAAATGGCCCTGCCAGATCTGTCCCATCATGTGTGAATGGGAAGTaGCCTCGTTTGCCATTACAC | + |
Preference number: 4 (lower is better) Translates to: PIRILAIRKNGPARSVPSCVNGK*PRLPLH Trigger: GTGTAATGGCAAACGAGGTCACTTCCCATTCACACA...TGATGGGACAGATCTGGCAGGGCCATTTTTCCTGATTGCTAGTATCCTAATGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017920.14 |
||
CDS-3UTR CCA 90 bp | AGCATTCAAATCAGTTGTGACGATGATTTTCTAAGAAGTGTTTTCGATGCCATACATAGTCCCCGGGGCTaGTGCTCGAGTCCCGCACCA | + |
Preference number: 4 (lower is better) Translates to: SIQISCDDDFLRSVFDAIHSPRG*CSSPAP Trigger: TGGTGCGGGACTCGAGCACCAGCCCCGGGGACTATG...TATGGCATCGAAAACACTTCTTAGAAAATCATCGTCACAACTGATTTGAATGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
CDS-3UTR CCA 90 bp | AAAAGATCCCAGGTAACAGAATGCTTATATAAACTAGACTGCTTTGACACCTGTCTCCTATTCGGAGCCTaGAGGGACTCACTCCCGGCG | + |
Preference number: 4 (lower is better) Translates to: KRSQVTECLYKLDCFDTCLLFGA*RDSLPA Trigger: CGCCGGGAGTGAGTCCCTCCAGGCTCCGAATAGGAG...ACAGGTGTCAAAGCAGTCTAGTTTATATAAGCATTCTGTTACCTGGGATCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
CDS-3UTR CCA 90 bp | GGTAATATTCACACAGTGCATGATTACGTCATGGGAGTGGGGAACAGTCTGCTGTACCCTGCCTTGATCTaGCCACTGGTTCTATCAATG | + |
Preference number: 4 (lower is better) Translates to: GNIHTVHDYVMGVGNSLLYPALI*PLVLSM Trigger: CATTGATAGAACCAGTGGCCAGATCAAGGCAGGGTA...CAGCAGACTGTTCCCCACTCCCATGACGTAATCATGCACTGTGTGAATATTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
CDS-3UTR TCA 90 bp | CTCTTAACCGCTGAGCCATCTGTCCAGCCCAAGAAGAACAGTATCTTAAATATATCCACTACCCTGCCTTaGTCTGGCCACTGGTTCTAT | + |
Preference number: 4 (lower is better) Translates to: LLTAEPSVQPKKNSILNISTTLP*SGHWFY Trigger: ATAGAACCAGTGGCCAGATCAAGGCAGGGTAGTGGA...TATATTTAAGATACTGTTCTTCTTGGGCTGGACAGATGGCTCAGCGGTTAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147718.2 |
||
CDS-3UTR TCA 90 bp | AAGTATAAGGTGTTTCTATTGGTCACCTACACCAGAGACCAGCAAGTGCCTTTAAATCAGAGCCGATACTaGGGCGGAGGCAGGTCTATA | + |
Preference number: 4 (lower is better) Translates to: KYKVFLLVTYTRDQQVPLNQSRY*GGGRSI Trigger: TATAGACCTGCCTCCGCCTCAGTATCGGCTCTGATT...TAAAGGCACTTGCTGGTCTCTGGTGTAGGTGACCAATAGAAACACCTTATACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
CDS-3UTR GCA 90 bp | AAGTATAAGGTGTTTCTATTGGTCACCTACACCAGAGACCAGCAAGTGCCTTTAATCACTCCACTACCCTaGCTTGATCTGGCCACTGGT | + |
Preference number: 4 (lower is better) Translates to: KYKVFLLVTYTRDQQVPLITPLP*LDLATG Trigger: ACCAGTGGCCAGATCAAGGCAGGGTAGTGGAGTGAT...TAAAGGCACTTGCTGGTCTCTGGTGTAGGTGACCAATAGAAACACCTTATACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
CDS-3UTR CCA 90 bp | AAAAGATCCCAGGTAACAGAATGCTTATATAAACTAGACTGCTTTGACACCTGTCCCAGTGGCTGTGGGTaGGAACCCTCCTGGTTACCT | + |
Preference number: 4 (lower is better) Translates to: KRSQVTECLYKLDCFDTCPSGCG*EPSWLP Trigger: AGGTAACCAGGAGGGTTCCCACCCACAGCCACTGGG...ACAGGTGTCAAAGCAGTCTAGTTTATATAAGCATTCTGTTACCTGGGATCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017920.14 |
||
CDS-3UTR TCA 90 bp | AGCATTCAAATCAGTTGTGACGATGATTTTCTAAGAAGTGTTTTCGATGCCATACTGCCTCCTCCTGCCTaGGAATCACTCCACTACCCT | + |
Preference number: 4 (lower is better) Translates to: SIQISCDDDFLRSVFDAILPPPA*ESLHYP Trigger: AGGGTAGTGGAGTGATTCTCAGGCAGGAGGAGGCAG...TATGGCATCGAAAACACTTCTTAGAAAATCATCGTCACAACTGATTTGAATGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
CDS-3UTR CCA 90 bp | AAGTATAAGGTGTTTCTATTGGTCACCTACACCAGAGACCAGCAAGTGCCTTTATACCCTGCCTTGATCTaGCCACTGGTTCTATCAATG | + |
Preference number: 4 (lower is better) Translates to: KYKVFLLVTYTRDQQVPLYPALI*PLVLSM Trigger: CATTGATAGAACCAGTGGCCAGATCAAGGCAGGGTA...TAAAGGCACTTGCTGGTCTCTGGTGTAGGTGACCAATAGAAACACCTTATACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
CDS-3UTR TCA 90 bp | GGACAAAGGAGAACCCAAATGAAGGCAATTTATAGTGTAATATACTTCACCAACTCCACTACCCTGCCTTaGTCTGGCCACTGGTTCTAT | + |
Preference number: 4 (lower is better) Translates to: GQRRTQMKAIYSVIYFTNSTTLP*SGHWFY Trigger: ATAGAACCAGTGGCCAGATCAAGGCAGGGTAGTGGA...GTTGGTGAAGTATATTACACTATAAATTGCCTTCATTTGGGTTCTCCTTTGTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
CDS-3UTR TCA 90 bp | TACACACGTGCTCAGCAATGTGCTAGTCACTTCAGTCACATGATTTGGTATATGAATGAATCAAATTCTTaGTCTCCTATTCGGAGCCTG | + |
Preference number: 4 (lower is better) Translates to: YTRAQQCASHFSHMIWYMNESNS*SPIRSL Trigger: CAGGCTCCGAATAGGAGATCAAGAATTTGATTCATT...CATATACCAAATCATGTGACTGAAGTGACTAGCACATTGCTGAGCACGTGTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
3UTR CAA 72 bp | TTTTTGGAAGATATTTGTAAGAAGTCCTTTGATCTCTaGAGGTCCAATAACTGCTACACCCAGCCAAATCCA | + |
Preference number: 4 (lower is better) Translates to: FLEDICKKSFDL*RSNNCYTQPNP Trigger: TGGATTTGGCTGGGTGTAGCAGTTATTGGACCTCAAGAGATCAAAGGACTTCTTACAAATATCTTCCAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
CDS-3UTR TCA 90 bp | CAATTTCAGTTTACTTTGCTCTGTGACAATGTACATACGCATCTGACTAGGATTAATGAATCAAATTCTTaGTCTCCTATTCGGAGCCTG | + |
Preference number: 4 (lower is better) Translates to: QFQFTLLCDNVHTHLTRINESNS*SPIRSL Trigger: CAGGCTCCGAATAGGAGATCAAGAATTTGATTCATT...AATCCTAGTCAGATGCGTATGTACATTGTCACAGAGCAAAGTAAACTGAAATTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000108425.8 |
||
CDS CCA 90 bp | CCGGGGCTGGTGCTCGAGTCCCGCACCAGGAACACCCCGTGCCGCTaGCCCTGCAATAGCGCCACCGCCTCCTGCCGGCTCAGGCGGCCC | + |
Preference number: 5 (lower is better) Translates to: PGLVLESRTRNTPCR*PCNSATASCRLRRP Trigger: GGGCCGCCTGAGCCGGCAGGAGGCGGTGGCGCTATTGCAGGGCCAGCGGCACGGGGTGTTCCTGGTGCGGGACTCGAGCACCAGCCCCGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000017920.14 ENSMUST00000093115.4 ENSMUST00000108425.8 ENSMUST00000108426.8 |
||
CDS-3UTR CAA 90 bp | ATGTGGTTGCTGGGATTTGAACTCAGGGCCTTCGGAAGAGCAGTCAATGCTCTTAGTGTTGACGCTGGGTaGGGCATAGGGCCCAGGCTC | + |
Preference number: 5 (lower is better) Translates to: MWLLGFELRAFGRAVNALSVDAG*GIGPRL Trigger: GAGCCTGGGCCCTATGCCCAACCCAGCGTCAACACT...AAGAGCATTGACTGCTCTTCCGAAGGCCCTGAGTTCAAATCCCAGCAACCACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147718.2 |
||
CDS-3UTR CAA 90 bp | TACGTCTTCTCATACAGGCACGGCAACTACCACCTAAAACTGCCAACTCAGAAGAGTGTTGACGCTGGGTaGGGCATAGGGCCCAGGCTC | + |
Preference number: 5 (lower is better) Translates to: YVFSYRHGNYHLKLPTQKSVDAG*GIGPRL Trigger: GAGCCTGGGCCCTATGCCCAACCCAGCGTCAACACT...CTTCTGAGTTGGCAGTTTTAGGTGGTAGTTGCCGTGCCTGTATGAGAAGACGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017920.14 |
||
CDS GCA 72 bp | GAGTCCCGCACCAGGAACACCCCGTGCCGCTGGCCCTaGAATAGCGCCACCGCCTCCTGCCGGCTCAGGCGG | + |
Preference number: 6 (lower is better) Translates to: ESRTRNTPCRWP*NSATASCRLRR Trigger: CCGCCTGAGCCGGCAGGAGGCGGTGGCGCTATTGCAGGGCCAGCGGCACGGGGTGTTCCTGGTGCGGGACTC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017920.14 ENSMUST00000093115.4 ENSMUST00000108425.8 ENSMUST00000108426.8 |
||
CDS CCA 72 bp | GTGCTCGAGTCCCGCACCAGGAACACCCCGTGCCGCTaGCCCTGCAATAGCGCCACCGCCTCCTGCCGGCTC | + |
Preference number: 6 (lower is better) Translates to: VLESRTRNTPCR*PCNSATASCRL Trigger: GAGCCGGCAGGAGGCGGTGGCGCTATTGCAGGGCCAGCGGCACGGGGTGTTCCTGGTGCGGGACTCGAGCAC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017920.14 ENSMUST00000093115.4 ENSMUST00000108425.8 ENSMUST00000108426.8 |
||
CDS CCA 72 bp | GGCATAGGGCCCAGGCTCCGGCCCACCCAGTGGCTGTaGGTGGGAACCCTCCTGGTTACCTCCAATCAGAGC | + |
Preference number: 6 (lower is better) Translates to: GIGPRLRPTQWL*VGTLLVTSNQS Trigger: GCTCTGATTGGAGGTAACCAGGAGGGTTCCCACCCACAGCCACTGGGTGGGCCGGAGCCTGGGCCCTATGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000147718.2 |
||
CDS CAA 90 bp | AATGGGCCCATTCTGGAGGTTAGGGAGCGGAGTGTTGACGCTGGGTaGGGCATAGGGCCCAGGCTCCGGCCCACCCAGTGGCTGTGGGTG | + |
Preference number: 6 (lower is better) Translates to: NGPILEVRERSVDAG*GIGPRLRPTQWLWV Trigger: CACCCACAGCCACTGGGTGGGCCGGAGCCTGGGCCCTATGCCCAACCCAGCGTCAACACTCCGCTCCCTAACCTCCAGAATGGGCCCATT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000147718.2 |
||
CDS CAA 72 bp | ATTCTGGAGGTTAGGGAGCGGAGTGTTGACGCTGGGTaGGGCATAGGGCCCAGGCTCCGGCCCACCCAGTGG | + |
Preference number: 6 (lower is better) Translates to: ILEVRERSVDAG*GIGPRLRPTQW Trigger: CCACTGGGTGGGCCGGAGCCTGGGCCCTATGCCCAACCCAGCGTCAACACTCCGCTCCCTAACCTCCAGAAT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017920.14 ENSMUST00000147718.2 |
||
CDS CCA 72 bp | GCAATGAATCAAATTCTTGATCTCCTATTCGGAGCCTaGAGGGACTCACTCCCGGCGGAGGCTGAGCGGGCG | + |
Preference number: 6 (lower is better) Translates to: AMNQILDLLFGA*RDSLPAEAERA Trigger: CGCCCGCTCAGCCTCCGCCGGGAGTGAGTCCCTCCAGGCTCCGAATAGGAGATCAAGAATTTGATTCATTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017920.14 ENSMUST00000093115.4 ENSMUST00000108425.8 ENSMUST00000147718.2 |