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Pregenerated sensors for CPLANE1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000039801

Ensembl transcript IDs: ENSMUST00000110617.2

Found 386 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CATAAAGGCAACATTACTGATTCATGTTTACTTTCCATCTTGGAATaGATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATAAATTC +
Preference number: 1 (lower is better)
Translates to: HKGNITDSCLLSILE*MVNPEKPMAAGYKF
Trigger: GAATTTATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAAGTAAACATGAATCAGTAATGTTGCCTTTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
3UTR CCA 90 bp AAGGCAACATTACTGATTCATGTTTACTTTCCATCTTGGAATGAATaGTTAACCCAGAGAAGCCTATGGCTGCAGGATATAAATTCTTTC +
Preference number: 1 (lower is better)
Translates to: KATLLIHVYFPSWNE*LTQRSLWLQDINSF
Trigger: GAAAGAATTTATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAAGTAAACATGAATCAGTAATGTTGCCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
3UTR CCA 72 bp CCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATaGCTGCAGGATATAAATTCTTTCATTATTTCGCAG +
Preference number: 3 (lower is better)
Translates to: PSWNEWLTQRSL*LQDINSFIISQ
Trigger: CTGCGAAATAATGAAAGAATTTATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTACACGCGGCGGGGCTTaGAGGGGGACACACAGCGGG +
Preference number: 4 (lower is better)
Translates to: AVLDPQNSEGHNSETLASTRGGA*RGTHSG
Trigger: CCCGCTGTGTGTCCCCCTCCAAGCCCCGCCGCGTGT...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTTCTGAGCAGCAGGGCTaGGAGTGGGACACGCGGCGG +
Preference number: 4 (lower is better)
Translates to: AVLDPQNSEGHNSETLASSEQQG*EWDTRR
Trigger: CCGCCGCGTGTCCCACTCCCAGCCCTGCTGCTCAGA...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTACACACAGCGGGGCTTaGAGGGGGACACGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: AVLDPQNSEGHNSETLASTHSGA*RGTRRR
Trigger: TCTCCTGCGTGTCCCCCTCCAAGCCCCGCTGTGTGT...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGACTCCGACGTGCTCCCTaGCTGCAGAGGGTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRLRRAP*LQRVLQ
Trigger: TTGGAGAACCCTCTGCAGTCAGGGAGCACGTCGGAG...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCAAGAGGCTTCTGGCTCTaGCAGGGAGGCTGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSRGFWL*QGGWEP
Trigger: AGGCTCCCAGCCTCCCTGTCAGAGCCAGAAGCCTCT...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTCTCCCTCTCAGCTaGCACCTGAGGCTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: AVLDPQNSEGHNSETLASALPLS*HLRLSV
Trigger: CACACTGAGCCTCAGGTGGCAGCTGAGAGGGAGAGC...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGACTGCTGGGCTGTTCTTaGCAGGCTCCCTGGTGCACT +
Preference number: 4 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRLLGCS*QAPWCT
Trigger: AGTGCACCAGGGAGCCTGGCAAGAACAGCCCAGCAG...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGACCCTCTCATCCTCTCTaGACGCCTGCTGCACTGGAG +
Preference number: 4 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRPSHPL*TPAALE
Trigger: CTCCAGTGCAGCAGGCGTGCAGAGAGGATGAGAGGG...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTTGTCATGCGTCCAGCTaGTGTCCCCCACCCAGTATG +
Preference number: 4 (lower is better)
Translates to: AVLDPQNSEGHNSETLASCHASS*CPPPSM
Trigger: CATACTGGGTGGGGGACATCAGCTGGACGCATGACA...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAGACGTGCTCCCTGACTaGAGAGGGTTCTCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRDVLPD*RGFSKV
Trigger: CACCTTGGAGAACCCTCTGCAGTCAGGGAGCACGTC...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTCCCTCTTGGCACGCCTaGTTTGCCTCTGCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: AVLDPQNSEGHNSETLASPSWHA*FASASL
Trigger: AAGGGAAGCAGAGGCAAAGCAGGCGTGCCAAGAGGG...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGATCCTGTTGTGCCCAGTaGACACGGAACAGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRSCCAQ*TRNSKD
Trigger: GTCCTTGCTGTTCCGTGTTCACTGGGCACAACAGGA...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAGGCAAGGCCATCTCTTaGGAAGGCAGAGATCAGAGC +
Preference number: 4 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRGKAIS*EGRDQS
Trigger: GCTCTGATCTCTGCCTTCTCAAGAGATGGCCTTGCC...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCACCTATGTTCCTCTaGACGCGCTTCAGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: AVLDPQNSEGHNSETLASAPMFL*TRFRAF
Trigger: GAAAGCCCTGAAGCGCGTGCAGAGGAACATAGGTGC...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAGAACATGCTCTGCAGTaGCAGAGGAAGGTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: HRTLRATTVRLWPVLGKREHALQ*QRKVFP
Trigger: CGGGAAGACCTTCCTCTGGCACTGCAGAGCATGTTC...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCAAGGAAAGGAAGCAGGTaGGAAGCTCCGAGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSRKGSR*EAPRCS
Trigger: GGAGCACCTCGGAGCTTCGCACCTGCTTCCTTTCCT...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGATCAGGATGCTGCCTGTaGTCTCAGACACGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRSGCCL*SQTRCP
Trigger: TGGACAGCGTGTCTGAGAGCACAGGCAGCATCCTGA...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTCACGCTGGCGTCTCGTaGTTCTTTCCTGGAACACTG +
Preference number: 4 (lower is better)
Translates to: AVLDPQNSEGHNSETLASHAGVS*FFPGTL
Trigger: CAGTGTTCCAGGAAAGAACCACGAGACGCCAGCGTG...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGACGAAGACGGAGCGTGTaGAGGGTGACTTTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRRRRSV*RVTLLL
Trigger: AAGCAGCAAAGTCACCCTCCACACGCTCCGTCTTCG...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCAAAAACGGGCTGCTTGTaGGGCAGAAGGGGTTGCGCT +
Preference number: 4 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSKTGCL*GRRGCA
Trigger: AGCGCAACCCCTTCTGCCCCACAAGCAGCCCGTTTT...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCATGCATTCTCTCTCTTTaGAGAGGAGCCCCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSCILSL*RGAPLP
Trigger: CGGCAGCGGGGCTCCTCTCCAAAGAGAGAGAATGCA...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTAGAACACTCACACTGTaGGGCGGCAGGATGAAGAGT +
Preference number: 4 (lower is better)
Translates to: AVLDPQNSEGHNSETLASRTLTL*GGRMKS
Trigger: ACTCTTCATCCTGCCGCCTCACAGTGTGAGTGTTCT...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGATACAGGATGACGGAGTaGCCCCAGGATCACAGAGAA +
Preference number: 4 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRYRMTE*PQDHRE
Trigger: TTCTCTGTGATCCTGGGGTCACTCCGTCATCCTGTA...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAGTAAGGAAAGGGGCTTaGAGTCACGCTTGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRVRKGA*SHAWAE
Trigger: TTCAGCCCAAGCGTGACTTCAAGCCCCTTTCCTTAC...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGATTGTGTCCAGCCATGTaGGGTGGGGAAGGAGACAAA +
Preference number: 4 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRLCPAM*GGEGDK
Trigger: TTTGTCTCCTTCCCCACCTCACATGGCTGGACACAA...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAAGATGTTCAAACTTCTaGGCAGCAGGGCTGGGAGTG +
Preference number: 4 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRRCSNF*AAGLGV
Trigger: CACTCCCAGCCCTGCTGCTCAGAAGTTTGAACATCT...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGACAACTCTGAGTGCTaGCTCTGGGTGGACATTTCC +
Preference number: 4 (lower is better)
Translates to: AVLDPQNSEGHNSETLASDNSEC*LWVDIS
Trigger: GGAAATGTCCACCCAGAGGCAGCACTCAGAGTTGTC...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCATCGCCGAACATGCTCTaGAGTGCCAGAGGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSSPNML*SARGRS
Trigger: AGACCTTCCTCTGGCACTGCAGAGCATGTTCGGCGA...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTTTCCTGAGCTGCTACTaGAGCTGGACAGTCAGCATC +
Preference number: 4 (lower is better)
Translates to: AVLDPQNSEGHNSETLASFLSCY*SWTVSI
Trigger: GATGCTGACTGTCCAGCTGCAGTAGCAGCTCAGGAA...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTTTGGCACGCCTGCTTTaGCTCTGCTTCCCTTGTGTT +
Preference number: 4 (lower is better)
Translates to: AVLDPQNSEGHNSETLASLARLL*LCFPCV
Trigger: AACACAAGGGAAGCAGAGGCAAAGCAGGCGTGCCAA...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGACATTCGCTCCTTCTaGTTCCTTCGCATCCAGGCT +
Preference number: 4 (lower is better)
Translates to: AVLDPQNSEGHNSETLASDIRSF*FLRIQA
Trigger: AGCCTGGATGCGAAGGAAGCAGAAGGAGCGAATGTC...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCAAGTGCTGCCTCTGGGTaGACATTTCCAGTCACTGCG +
Preference number: 4 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSSAASG*TFPVTA
Trigger: CGCAGTGACTGGAAATGTCCACCCAGAGGCAGCACT...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTATTCCCAAACACCAATaGCAGGCAGTGCTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: AVLDPQNSEGHNSETLASIPKHQ*QAVLPS
Trigger: GGAAGGAAGCACTGCCTGTCATTGGTGTTTGGGAAT...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTTCTTTCCTGGAACACTaGGCCTCTTCTTCGGAATGC +
Preference number: 4 (lower is better)
Translates to: AVLDPQNSEGHNSETLASSFLEH*ASSSEC
Trigger: GCATTCCGAAGAAGAGGCTCAGTGTTCCAGGAAAGA...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAGAAGCATCTGGTAACTaGGCCCTGTGTTCATTTCCC +
Preference number: 4 (lower is better)
Translates to: HRTLRATTVRLWPVLGKREASGN*ALCSFP
Trigger: GGGAAATGAACACAGGGCTCAGTTACCAGATGCTTC...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCACTGAGGGAAATCGACTaGATGCTCTTGGTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSLREID*MLLVVL
Trigger: CAGCACCACCAAGAGCATTCAGTCGATTTCCCTCAG...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTTTCTGTGCCAGGTACTaGGGGAAATCGACTGAATGC +
Preference number: 4 (lower is better)
Translates to: AVLDPQNSEGHNSETLASFCARY*GKSTEC
Trigger: GCATTCAGTCGATTTCCCTCAGTACCTGGCACAGAA...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGACTTGGTAACTTCATCTaGAGGCTCTTCACAGGCAGG +
Preference number: 4 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRLGNFI*RLFTGR
Trigger: CCTGCCTGTGAAGAGCCTTCAGATGAAGTTACCAAG...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAGTCTCCAAGTTTATGTaGCATCCACACAGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRVSKFM*HPHSLW
Trigger: CCAGAGGCTGTGTGGATGGCACATAAACTTGGAGAC...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAAGCAGGAGAACTCGCTaGAGGATTCCAGACAGCTTT +
Preference number: 4 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRSRRTR*RIPDSF
Trigger: AAAGCTGTCTGGAATCCTGCAGCGAGTTCTCCTGCT...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCCTCTTCTTCGGAATaGTCTGATGAGAGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: AVLDPQNSEGHNSETLASASSSE*SDESCD
Trigger: GTCACAGCTCTCATCAGAGCATTCCGAAGAAGAGGC...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGATTTTCTGCCATGGTCTaGACTGCTACCAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRFSAMV*TATSCS
Trigger: TGAGCAGCTGGTAGCAGTGCAGACCATGGCAGAAAA...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCATTCACTAAGAACAGCTaGCTGGGGGCAATACAGCGG +
Preference number: 4 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSFTKNS*LGAIQR
Trigger: CCGCTGTATTGCCCCCAGCCAGCTGTTCTTAGTGAA...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCAACTTCATCAAGCGTGTaGTCTCCAGTCGCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSTSSSV*SPVAPG
Trigger: ACCTGGAGCGACTGGAGACCACACGCTTGATGAAGT...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCAGAAGCTGAAAGGGCCTaGCTTTCGAAATGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSEAERA*LSKCRA
Trigger: TGCCCGACATTTCGAAAGCCAGGCCCTTTCAGCTTC...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGATCCAGCCATGTGAGGTaGGGAAGGAGACAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRSSHVR*GRRQRF
Trigger: AAACCTTTGTCTCCTTCCCCACCTCACATGGCTGGA...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCAGAAGCAAGGACCTCATaGGCATTGTTGGAGACTGGT +
Preference number: 4 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSEARTS*ALLETG
Trigger: ACCAGTCTCCAACAATGCTCATGAGGTCCTTGCTTC...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCACTCAAGCCTCTGGGTTaGATCAAGAAGCAAGGACCT +
Preference number: 4 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSLKPLG*IKKQGP
Trigger: AGGTCCTTGCTTCTTGATTCAACCCAGAGGCTTGAG...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGTAAGTTCTAAGGCTTaGTTCAAGCTATCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: AVLDPQNSEGHNSETLASVSSKA*FKLSPA
Trigger: GGCTGGGGATAGCTTGAATCAAGCCTTAGAACTTAC...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCAGCCCATTCCAGTGCATaGAAACAGTGCTCAACCACA +
Preference number: 4 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSAHSSA*KQCSTT
Trigger: TGTGGTTGAGCACTGTTTTCATGCACTGGAATGGGC...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATCAGTTCCTCAGTCTaGGGACCTTTCACAACACCA +
Preference number: 4 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRISSSV*GPFTTP
Trigger: TGGTGTTGTGAAAGGTCCTCAGACTGAGGAACTGAT...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCATCCTTCTTCAGAGTCTaGGATGTGCACGTCCATCTC +
Preference number: 4 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSSFFRV*DVHVHL
Trigger: GAGATGGACGTGCACATCTCAGACTCTGAAGAAGGA...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCATTTCTTCTCGGCTTCTaGGCTCTTCCTTCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSFLLGF*ALPSCS
Trigger: GCTGCAAGAAGGAAGAGCTCAGAAGCCGAGAAGAAA...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCAAGAAAAAGACTGTCATaGGTCCAGCTGATGTCCCCC +
Preference number: 4 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSRKRLS*VQLMSP
Trigger: GGGGGACATCAGCTGGACGCATGACAGTCTTTTTCT...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTAAAAGAACACCGAGATaGCCGGAAAAGCAGGAGAAC +
Preference number: 4 (lower is better)
Translates to: AVLDPQNSEGHNSETLASKRTPR*PEKQEN
Trigger: GTTCTCCTGCTTTTCCGGGCATCTCGGTGTTCTTTT...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTACAGGCCCATTCCAGTaGATGAAAACAGTGCTCAAC +
Preference number: 4 (lower is better)
Translates to: AVLDPQNSEGHNSETLASTGPFQ*MKTVLN
Trigger: GTTGAGCACTGTTTTCATGCACTGGAATGGGCCTGT...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGACTGCCTGCAAAAATCTaGGGACAGTGCAATGTACTG +
Preference number: 4 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRLPAKI*GQCNVL
Trigger: CAGTACATTGCACTGTCCCCAGATTTTTGCAGGCAG...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTACAGCTTCATTTTCTTaGCCCAACCAGGATACTCTG +
Preference number: 4 (lower is better)
Translates to: AVLDPQNSEGHNSETLASTASFS*PNQDTL
Trigger: CAGAGTATCCTGGTTGGGTCAAGAAAATGAAGCTGT...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCAGAAACCGAAGGGTTGTaGCCATGTATCCATCAGAGA +
Preference number: 4 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSETEGL*PCIHQR
Trigger: TCTCTGATGGATACATGGTCACAACCCTTCGGTTTC...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCAAGCAACCTAGGGCTTTaGTGGAAACTTCATCAAGCG +
Preference number: 4 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSSNLGL*WKLHQA
Trigger: CGCTTGATGAAGTTTCCATCAAAGCCCTAGGTTGCT...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGATCAGGCTCAGAAAATTaGTCTGCTGCAGCTGAACTA +
Preference number: 4 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRSGSEN*SAAAEL
Trigger: TAGTTCAGCTGCAGCAGATCAATTTTCTGAGCCTGA...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCATGCTCTTGGTGGTGCTaGGAATACATAAGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSCSWWC*EYIRRL
Trigger: AAGCCTCCTTATGTATTCTCAGCACCACCAAGAGCA...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAAATGACAGTTGCGGTTaGTTTCTTCCTTCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRNDSCG*FLPSVP
Trigger: TGGCACAGAAGGAAGAAATCAACCGCAACTGTCATT...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAGCTCCTTTGCTTCGATaGCACTTTTTCTCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRAPLLR*HFFSSF
Trigger: AAAGCTGGAGAAAAAGTGTCATCGAAGCAAAGGAGC...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGACATCATACTCTGGTATaGTTTCTCAAGCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRHHTLV*FLKPLG
Trigger: ACCCAGAGGCTTGAGAAAGCATACCAGAGTATGATG...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCAAATTCTTTTGTGGTCTaGTGGGCTGTTCTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSNSFVV*WAVLAR
Trigger: CCTGGCAAGAACAGCCCAGCAGACCACAAAAGAATT...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAGATTTCTTCCTTCTGTaGCAGGTACTGAGGGAAATC +
Preference number: 4 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRDFFLL*QVLREI
Trigger: GATTTCCCTCAGTACCTGGCACAGAAGGAAGAAATC...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTTCCAGACACACTGTGTaGCAGTTTTTGTTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: AVLDPQNSEGHNSETLASSRHTV*QFLLAS
Trigger: AGAAGCCAACAAAAACTGGCACACAGTGTGTCTGGA...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAGCTTTCTCAAGCCTCTaGGTTGAATCAAGAAGCAAG +
Preference number: 4 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRAFSSL*VESRSK
Trigger: CTTGCTTCTTGATTCAACCCAGAGGCTTGAGAAAGC...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCACATCCACACAGCCTCTaGAATCAGGCCACCAATAAA +
Preference number: 4 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSHPHSL*NQATNK
Trigger: TTTATTGGTGGCCTGATTCCAGAGGCTGTGTGGATG...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTCTATATTTTCTGCCATaGTCTGCACTGCTACCAGCT +
Preference number: 4 (lower is better)
Translates to: AVLDPQNSEGHNSETLASLYFLP*SALLPA
Trigger: AGCTGGTAGCAGTGCAGACCATGGCAGAAAATATAG...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTAGGTTAGTCTGGACATaGCATAACAGAGTCTTGACA +
Preference number: 4 (lower is better)
Translates to: AVLDPQNSEGHNSETLASRLVWT*HNRVLT
Trigger: TGTCAAGACTCTGTTATGTCATGTCCAGACTAACCT...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTACTCTTTGTGGAGTTTaGTACTTGGCTTTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: AVLDPQNSEGHNSETLASTLCGV*YLAFPK
Trigger: TTTGGGGAAAGCCAAGTATCAAACTCCACAAAGAGT...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGATCTTTTGCCTTTGCCTaGTCTGCCTTGAAGTCATAT +
Preference number: 4 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRSFAFA*SALKSY
Trigger: ATATGACTTCAAGGCAGATCAGGCAAAGGCAAAAGA...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGATCCTTCAACAAAGGCTaGAAACTAGGGATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRSFNKG*KLGIFF
Trigger: GAAGAAGATCCCTAGTTTGCAGCCTTTGTTGAAGGA...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATTGTTTCTTCTGCCTaGAAAAATCTGGGGACAGTG +
Preference number: 4 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRIVSSA*KNLGTV
Trigger: CACTGTCCCCAGATTTTTGCAGGCAGAAGAAACAAT...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGACTTCATTGTTTCTTCTaGCTGCAAAAATCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRLHCFF*LQKSGD
Trigger: GTCCCCAGATTTTTGCAGGCAGAAGAAACAATGAAG...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGAGCTTTACAGTATTTaGGGTGAGCCTTATCAAGTG +
Preference number: 4 (lower is better)
Translates to: AVLDPQNSEGHNSETLASELYSI*GEPYQV
Trigger: CACTTGATAAGGCTCACCGCAAATACTGTAAAGCTC...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGATGTAAGATGTACCACTaGGCTACAGGAAAAGAACAC +
Preference number: 4 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRCKMYH*ATGKEH
Trigger: GTGTTCTTTTCCTGTAGCGCAGTGGTACATCTTACA...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCATTCACTCGAATCTTCTaGATCACCTTCCTTGCCCAT +
Preference number: 4 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSFTRIF*ITFLAH
Trigger: ATGGGCAAGGAAGGTGATGCAGAAGATTCGAGTGAA...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAACAGAGGCCATGAAATaGAGTCCTGCTGAAGTATTA +
Preference number: 4 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRTEAMK*SPAEVL
Trigger: TAATACTTCAGCAGGACTGCATTTCATGGCCTCTGT...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTACCCCGAGTAGAGCTTaGAGATTCTTGACTTTGAAA +
Preference number: 4 (lower is better)
Translates to: AVLDPQNSEGHNSETLASTPSRA*RFLTLK
Trigger: TTTCAAAGTCAAGAATCTGCAAGCTCTACTCGGGGT...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAGATGCAGGGAAGTCTTaGTCTATATTTTCTGCCATG +
Preference number: 4 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRDAGKS*SIFSAM
Trigger: CATGGCAGAAAATATAGAGCAAGACTTCCCTGCATC...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTTTCATCTTTTGCCTTTaGCTGATCTGCCTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: AVLDPQNSEGHNSETLASFIFCL*LICLEV
Trigger: GACTTCAAGGCAGATCAGGCAAAGGCAAAAGATGAA...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGTGAGCCTTATCAAGTaGCCCATGTTTTGTCTGTAT +
Preference number: 4 (lower is better)
Translates to: AVLDPQNSEGHNSETLASVSLIK*PMFCLY
Trigger: ATACAGACAAAACATGGGCCACTTGATAAGGCTCAC...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTTACCTTTCTGATTGGTaGCAGTTCTCCAATAAGGCT +
Preference number: 4 (lower is better)
Translates to: AVLDPQNSEGHNSETLASYLSDW*QFSNKA
Trigger: AGCCTTATTGGAGAACTGCCACCAATCAGAAAGGTA...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCAGAATGCCAGGGTCACTaGAACAAAGGTCTCTTTCAA +
Preference number: 4 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSECQGH*NKGLFQ
Trigger: TTGAAAGAGACCTTTGTTCCAGTGACCCTGGCATTC...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTAAAGCTTGTCAAAAATaGAATGCCAGGGTCACTGGA +
Preference number: 4 (lower is better)
Translates to: AVLDPQNSEGHNSETLASKACQK*NARVTG
Trigger: TCCAGTGACCCTGGCATTCCATTTTTGACAAGCTTT...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCACTGATGGTCTTGCTCTaGCGTCGTTTTAATGTTGTG +
Preference number: 4 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSLMVLL*RRFNVV
Trigger: CACAACATTAAAACGACGCCAGAGCAAGACCATCAG...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCACAGGAGATTTTCAAGTaGGATAAGCTGGGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSQEIFK*DKLGLL
Trigger: AAGAAGCCCCAGCTTATCCCACTTGAAAATCTCCTG...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCAGACAGTGCAATGTACTaGACTTTCCTTTCCTTGATG +
Preference number: 4 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSDSAMY*TFLSLM
Trigger: CATCAAGGAAAGGAAAGTTCAGTACATTGCACTGTC...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATATGCACTGGACAACTCTaGGTGCTGCCTCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDICTGQL*VLPLGG
Trigger: TCCACCCAGAGGCAGCACTCAGAGTTGTCCAGTGCA...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTTCACAACACCATGTTTaGGTTTCTGTTGAAGAGAGT +
Preference number: 4 (lower is better)
Translates to: AVLDPQNSEGHNSETLASSQHHV*VSVEES
Trigger: ACTCTCTTCAACAGAAACTCAAACATGGTGTTGTGA...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATACACTCAGTCCCTTCCTaGGCTGCTACTGCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDIHSVPS*AATAAG
Trigger: TCCAGCTGCAGTAGCAGCTCAGGAAGGGACTGAGTG...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATAACTCTGGCCTGCAGATaGCAGCACTGGGACCTCTCA +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDITLACR*QHWDLS
Trigger: TGAGAGGTCCCAGTGCTGTCATCTGCAGGCCAGAGT...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCACTCTATGATGACTTCTaGGTCATTGCTAATGAGGGA +
Preference number: 4 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSLYDDF*VIANEG
Trigger: TCCCTCATTAGCAATGACTCAGAAGTCATCATAGAG...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTTTGTCAAAAATGGAATaGCAGGGTCACTGGAACAAA +
Preference number: 4 (lower is better)
Translates to: AVLDPQNSEGHNSETLASLSKME*QGHWNK
Trigger: TTTGTTCCAGTGACCCTGGCATTCCATTTTTGACAA...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCACACGTCATGGTTTTCTaGTTCAGCTGGCATTCTATT +
Preference number: 4 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSHVMVF*FSWHSI
Trigger: AATAGAATGCCAGCTGAAGCAGAAAACCATGACGTG...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGACTTCTTTATCTTTCGTaGAAGGCAACGAAACTGCTT +
Preference number: 4 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRLLYLS*KATKLL
Trigger: AAGCAGTTTCGTTGCCTTCCACGAAAGATAAAGAAG...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCATGCTACCTTTCTGATTaGTGGCAGTTCTCCAATAAG +
Preference number: 4 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSCYLSD*WQFSNK
Trigger: CTTATTGGAGAACTGCCACCAATCAGAAAGGTAGCA...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGAAGCATCCTTTGCATaGACTGTATCAAACATAGAT +
Preference number: 4 (lower is better)
Translates to: AVLDPQNSEGHNSETLASEASFA*TVSNID
Trigger: ATCTATGTTTGATACAGTTCATGCAAAGGATGCTTC...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTCAATCTGAACAATCTTaGCTTTCTCTTACAGGTAAC +
Preference number: 4 (lower is better)
Translates to: AVLDPQNSEGHNSETLASQSEQS*LSLTGN
Trigger: GTTACCTGTAAGAGAAAGTCAAGATTGTTCAGATTG...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATACCTGTGACTCAGGAGTaGCAGCAAAGCAGGAACCAG +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDIPVTQE*QQSRNQ
Trigger: CTGGTTCCTGCTTTGCTGTCACTCCTGAGTCACAGG...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCAAAAATCTGGGGACAGTaGAATGTACTGAACTTTCCT +
Preference number: 4 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSKIWGQ*NVLNFP
Trigger: AGGAAAGTTCAGTACATTGCACTGTCCCCAGATTTT...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCATGGACCGCGCAAAATTaGAATCATGTTTACAGAACA +
Preference number: 4 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSWTAQN*NHVYRT
Trigger: TGTTCTGTAAACATGATTGCAATTTTGCGCGGTCCA...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTCTTTGTATTTTCTCTTaGTTTCTGATACTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: AVLDPQNSEGHNSETLASLCIFS*FLILPA
Trigger: TGCAGGCAGTATCAGAAAGCAAGAGAAAATACAAAG...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATAAGTCCCTTCCTGAGCTaGTACTGCAGCTGGACAGTC +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDISPFLS*YCSWTV
Trigger: GACTGTCCAGCTGCAGTAGCAGCTCAGGAAGGGACT...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATAGGTGAGGACAGCCTCTaGTTTTCTCATGGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDIGEDSL*FSHGFR
Trigger: GCGGAAGCCATGAGAAAAGCAGAGGCTGTCCTCACC...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGATTGGCTTCTTTTAAATaGCAGGAGATTTTCAAGTGG +
Preference number: 4 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRLASFK*QEIFKW
Trigger: CCACTTGAAAATCTCCTGGCATTTAAAAGAAGCCAA...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATATGCACTGCTACCAGCTaGTCATCCATCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDICTATS*SSISWS
Trigger: GCTCCAGGAGATGGATGAGCAGCTGGTAGCAGTGCA...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATAGTTTGCTCAGGATGCTaGCTGTGCTCTCAGACACGC +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDIVCSGC*LCSQTR
Trigger: GCGTGTCTGAGAGCACAGGCAGCATCCTGAGCAAAC...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATTCCAGACAGCTTTTaGCGATTATCTTTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRIPDSF*RLSFSA
Trigger: AGCTGAAAAAGATAATCGCCAAAAGCTGTCTGGAAT...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATATCTTGCCAGGCTCCCTaGTGCACTCTCCCATGGATT +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDISCQAP*CTLPWI
Trigger: AATCCATGGGAGAGTGCACCAGGGAGCCTGGCAAGA...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCATCTGAATCAGCTTTTTaGGAAGGACCTTCCTTATCT +
Preference number: 4 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSSESAF*EGPSLS
Trigger: AGATAAGGAAGGTCCTTCCCAAAAAGCTGATTCAGA...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCATTGATCTGCTGCAGCTaGACTAATTTAAACATCTCA +
Preference number: 4 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSLICCS*TNLNIS
Trigger: TGAGATGTTTAAATTAGTTCAGCTGCAGCAGATCAA...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATAAGGGCATTCCTGTTGTaGCCAGTGAACACGGAACAG +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDIRAFLL*PVNTEQ
Trigger: CTGTTCCGTGTTCACTGGGCACAACAGGAATGCCCT...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGACTTTCTGATACTGCCTaGAAGTGTATGACAATTTAT +
Preference number: 4 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRLSDTA*KCMTIY
Trigger: ATAAATTGTCATACACTTGCAGGCAGTATCAGAAAG...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATACAAGTACCCTTGCCCTaGGTACTGACCCATGTTCAC +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDIQVPLP*VLTHVH
Trigger: GTGAACATGGGTCAGTACGCAGGGCAAGGGTACTTG...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATAAGTATATCTCTGTCCTaGTGTCTGTCAGACGGCGGC +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDISISLS*CLSDGG
Trigger: GCCGCCGTCTGACAGACAGCAGGACAGAGATATACT...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTTTTCAAGTAATTCATTaGTGTCATTCAAACCAGGAG +
Preference number: 4 (lower is better)
Translates to: AVLDPQNSEGHNSETLASFQVIH*CHSNQE
Trigger: CTCCTGGTTTGAATGACAGCAATGAATTACTTGAAA...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATATCTGAGTGCTGCCTCTaGGTGGACATTTCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDISECCL*VDISSH
Trigger: GTGACTGGAAATGTCCACCCAGAGGCAGCACTCAGA...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATAAGCTGCTACTGCAGCTaGACAGTCAGCATCAACGTC +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDISCYCS*TVSINV
Trigger: GACGTTGATGCTGACTGTCCAGCTGCAGTAGCAGCT...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATAGTATGCACTGTTCTCTaGGACACAGGAGGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDIVCTVL*DTGGWQ
Trigger: TTGCCAACCTCCTGTGTCTCAGAGAACAGTGCATAC...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATATTCGTACAGAGGCCATaGAATGCAGTCCTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDIFVQRP*NAVLLK
Trigger: CTTCAGCAGGACTGCATTTCATGGCCTCTGTACGAA...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATACCAGTCACCTGGAGCTaGTCTTCTGAACCACTTTCA +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDIPVTWS*SSEPLS
Trigger: TGAAAGTGGTTCAGAAGATCAGCTCCAGGTGACTGG...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATACAAGTTTGCTCAGGATaGTGCCTGTGCTCTCAGACA +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDIQVCSG*CLCSQT
Trigger: TGTCTGAGAGCACAGGCAGCATCCTGAGCAAACTTG...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATATCAGCCCTTTGTCCTTaGGCTCAGACAGCATCATAC +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDISALCP*AQTASY
Trigger: GTATGATGCTGTCTGAGCCCAAGGACAAAGGGCTGA...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCACTCTGTTCCTTGAACTaGAAGTTTTGTTCTAGTATA +
Preference number: 4 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSLCSLN*KFCSSI
Trigger: TATACTAGAACAAAACTTCCAGTTCAAGGAACAGAG...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATATCTTATCCTCCACGCTaGCCACCATGTCTTCAACAG +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDISYPPR*PPCLQQ
Trigger: CTGTTGAAGACATGGTGGCCAGCGTGGAGGATAAGA...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATATTACAGTATTTGCGGTaGGCCTTATCAAGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDILQYLR*ALSSGP
Trigger: TGGGCCACTTGATAAGGCTCACCGCAAATACTGTAA...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATACTTCTGAGGTGTTTGTaGAGTATCCTGGGCTCCATT +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDILLRCL*SILGSI
Trigger: AATGGAGCCCAGGATACTTCACAAACACCTCAGAAG...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATATCATCTTGGAGCATCTaGCTAACAGACTCGGAAGCA +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDISSWSI*LTDSEA
Trigger: TGCTTCCGAGTCTGTTAGGCAGATGCTCCAAGATGA...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATACCTGGTAAGTGTAGCTaGGACCACGGGATTCTTATT +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDIPGKCS*DHGILI
Trigger: AATAAGAATCCCGTGGTCCCAGCTACACTTACCAGG...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATACTCGTGGTTCTTTCCTaGAACACTGAGCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDILVVLS*NTEPLL
Trigger: AAGAAGAGGCTCAGTGTTCCAGGAAAGAACCACGAG...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATATCTTTTGGTTGGGCCTaGGGCCTGAAAGAAACTTGT +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDISFGWA*GLKETC
Trigger: ACAAGTTTCTTTCAGGCCCCAGGCCCAACCAAAAGA...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATATTTCTGCTACCTTTCTaGTTGGTGGCAGTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDIFLLPF*LVAVLQ
Trigger: TTGGAGAACTGCCACCAATCAGAAAGGTAGCAGAAA...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATACACCTGAGTTGCCGTTaGGTCTTTCTGATTAAGAGT +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDIHLSCR*VFLIKS
Trigger: ACTCTTAATCAGAAAGACCCAACGGCAACTCAGGTG...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATACACTGCAGCTTTTCCTaGAAAATCTGTGCTGGTATC +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDIHCSFS*KICAGI
Trigger: GATACCAGCACAGATTTTCCAGGAAAAGCTGCAGTG...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATAGTTTGTGAAGTATCCTaGGCTCCATTTGACATGAGG +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDIVCEVS*APFDMR
Trigger: CCTCATGTCAAATGGAGCCCAGGATACTTCACAAAC...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATAGCGGAAGCTAACATTTaGTTTTCTTCTCGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDIAEANI*FSSRLL
Trigger: CAGAAGCCGAGAAGAAAACCAAATGTTAGCTTCCGC...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATAAGAGATGGCTTGATCTaGAGATATGTCTGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDIRDGLI*RYVCLL
Trigger: GAGGAGACAGACATATCTCCAGATCAAGCCATCTCT...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATATGCCCCTTACAGAGATaGCTTGATCTGGAGATATGT +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDICPLQR*LDLEIC
Trigger: ACATATCTCCAGATCAAGCCATCTCTGTAAGGGGCA...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATAAGAATAAAAAGTAAATaGACACAGGCAGCAGTCGCC +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDIRIKSK*TQAAVA
Trigger: GGCGACTGCTGCCTGTGTTCATTTACTTTTTATTCT...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATAAATTTATCCCGGACATaGAACATCCAGCACAAAGCA +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDINLSRT*NIQHKA
Trigger: TGCTTTGTGCTGGATGTTGCATGTCCGGGATAAATT...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATAAAGGTCCGAAATCTGTaGACCTTTCTGTTCTGTCAA +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDIKVRNL*TFLFCQ
Trigger: TTGACAGAACAGAAAGGTGCACAGATTTCGGACCTT...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATAAGACAAAGGTTTCTCTaGTATTCCACTGGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDIRQRFL*YSTGKS
Trigger: AGACTTCCCAGTGGAATAGCAGAGAAACCTTTGTCT...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATATTGCTCTATATTTTCTaGCATGGTCTGCACTGCTAC +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDILLYIF*HGLHCY
Trigger: GTAGCAGTGCAGACCATGGCAGAAAATATAGAGCAA...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATATGCGATCTCACAATCTaGACAATCTTGACTTTCTCT +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDICDLTI*TILTFS
Trigger: AGAGAAAGTCAAGATTGTTCAGATTGTGAGATCGCA...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATATTCCACTGGGAAGTCTaGCATTTAGATATATGTCTG +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDIFHWEV*HLDICL
Trigger: CAGACATATATCTAAATGTCAGACTTCCCAGTGGAA...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATATCCAGGTCTAAAGAATaGTATCCCTCCTTTACAGTA +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDISRSKE*YPSFTV
Trigger: TACTGTAAAGGAGGGATAGCATTCTTTAGACCTGGA...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATAAATCTCAGGCTCCTTTaGTTCGATGACACTTTTTCT +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDINLRLL*FDDTFS
Trigger: AGAAAAAGTGTCATCGAAGCAAAGGAGCCTGAGATT...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATAAACTGTCCACACATTTaGGAGATTCTGATCTCTAAT +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDINCPHI*EILISN
Trigger: ATTAGAGATCAGAATCTCTCAAATGTGTGGACAGTT...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR TCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATAGTTTTTACTACTTTCTaGATCAGCTTTTTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDIVFTTF*ISFLGR
Trigger: CCTTCCCAAAAAGCTGATTCAGAAAGTAGTAAAAAC...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR GCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATACTTGGAAGCATCCTTTaGATGAACTGTATCAAACAT +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDILGSIL*MNCIKH
Trigger: ATGTTTGATACAGTTCATGCAAAGGATGCTTCCAAG...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CCA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATACTTTCTTTTTATCACTaGGCTTTTTACCAACCAATG +
Preference number: 4 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDILSFYH*AFYQPM
Trigger: CATTGGTTGGTAAAAAGCCCAGTGATAAAAAGAAAG...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGACACGCGGCGGGGCTaGGAGGGGGACACACAGCGG +
Preference number: 5 (lower is better)
Translates to: AVLDPQNSEGHNSETLASDTRRG*EGDTQR
Trigger: CCGCTGTGTGTCCCCCTCCAAGCCCCGCCGCGTGTC...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 90 bp TCGTCAGCTGGCGACATGTCCTGTAGGAGGGACTCGGGCCTGCCGTaGAGAATCCTGTGGATTTCCGAGGGCAGCGTCCAGGGACTCACC +
Preference number: 5 (lower is better)
Translates to: SSAGDMSCRRDSGLP*RILWISEGSVQGLT
Trigger: GGTGAGTCCCTGGACGCTGCCCTCGGAAATCCACAGGATTCTTCACGGCAGGCCCGAGTCCCTCCTACAGGACATGTCGCCAGCTGACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 90 bp CTTCCTCGTCAGCTGGCGACATGTCCTGTAGGAGGGACTCGGGCCTaGCGTGAAGAATCCTGTGGATTTCCGAGGGCAGCGTCCAGGGAC +
Preference number: 5 (lower is better)
Translates to: LPRQLATCPVGGTRA*REESCGFPRAASRD
Trigger: GTCCCTGGACGCTGCCCTCGGAAATCCACAGGATTCTTCACGGCAGGCCCGAGTCCCTCCTACAGGACATGTCGCCAGCTGACGAGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 90 bp GACACGCAGGAGAGCTTGGACGGGGACACACAGCAGGGCTTGGTGTaGGACACGCAGGAGAGGCATTCTGTAGCAGGGTCCAAAGCAGGG +
Preference number: 5 (lower is better)
Translates to: DTQESLDGDTQQGLV*DTQERHSVAGSKAG
Trigger: CCCTGCTTTGGACCCTGCTACAGAATGCCTCTCCTGCGTGTCCCACACCAAGCCCTGCTGTGTGTCCCCGTCCAAGCTCTCCTGCGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 90 bp CAAGTTTGCTCAGGATGCTGCCTGTGCTCTCAGACACGCTGTCCATaGCACCCGCCAAAAGAGGGGGCTCGGGCTCTTCCTCGTCAGCTG +
Preference number: 5 (lower is better)
Translates to: QVCSGCCLCSQTRCP*HPPKEGARALPRQL
Trigger: CAGCTGACGAGGAAGAGCCCGAGCCCCCTCTTTTGGCGGGTGGCATGGACAGCGTGTCTGAGAGCACAGGCAGCATCCTGAGCAAACTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 90 bp GAGGGTTCTCCGACGTGCTCCCTGACTGCAGAGGGTTCTCCAAGGTaGTCCCTGACTGGTTACCTAGTGCTGAAGCTGAAAGGGCCTGGC +
Preference number: 5 (lower is better)
Translates to: EGSPTCSLTAEGSPR*SLTGYLVLKLKGPG
Trigger: GCCAGGCCCTTTCAGCTTCAGCACTAGGTAACCAGTCAGGGAGCACCTTGGAGAACCCTCTGCAGTCAGGGAGCACGTCGGAGAACCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAGACACACAGCAGGGCTaGGTGTGGGACACGCAGGAG +
Preference number: 5 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRDTQQG*VWDTQE
Trigger: CTCCTGCGTGTCCCACACCAAGCCCTGCTGTGTGTC...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCATCTGCTGGGCTGTTCTaGCCAGGCTCCCTGGTGCAC +
Preference number: 5 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSSAGLF*PGSLVH
Trigger: GTGCACCAGGGAGCCTGGCAAGAACAGCCCAGCAGA...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTTCTTGCAGCTCCCTCTaGGCACGCCTGCTTTGCCTC +
Preference number: 5 (lower is better)
Translates to: AVLDPQNSEGHNSETLASSCSSL*ARLLCL
Trigger: GAGGCAAAGCAGGCGTGCCAAGAGGGAGCTGCAAGA...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 90 bp CTTGGCACGCCTGCTTTGCCTCTGCTTCCCTTGTGTTATCCCAGCTaGGTCCATGCTGACTCCTACAAAGTGAGGAGCAGCGTCACCTTG +
Preference number: 5 (lower is better)
Translates to: LGTPALPLLPLCYPS*VHADSYKVRSSVTL
Trigger: CAAGGTGACGCTGCTCCTCACTTTGTAGGAGTCAGCATGGACGCAGCTGGGATAACACAAGGGAAGCAGAGGCAAAGCAGGCGTGCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 90 bp AAGCGGAGGGAGAACACTCACACTGTGAGGCGGCAGGATGAAGAGTaGCTCATTGGTGAAATAGGCAGCCATGAAGCGGGCCATGCACTG +
Preference number: 5 (lower is better)
Translates to: KRRENTHTVRRQDEE*LIGEIGSHEAGHAL
Trigger: CAGTGCATGGCCCGCTTCATGGCTGCCTATTTCACCAATGAGCCACTCTTCATCCTGCCGCCTCACAGTGTGAGTGTTCTCCCTCCGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTCTTGGCACGCCTGCTTaGCCTCTGCTTCCCTTGTGT +
Preference number: 5 (lower is better)
Translates to: AVLDPQNSEGHNSETLASLGTPA*PLLPLC
Trigger: ACACAAGGGAAGCAGAGGCAAAGCAGGCGTGCCAAG...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCAGTTCATGGCCTGAGCTaGCAGCCGTGGCTTGTGGGT +
Preference number: 5 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSVHGLS*QPWLVG
Trigger: ACCCACAAGCCACGGCTGCAAGCTCAGGCCATGAAC...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCAGTGCATTCTCTCTCTTaGGAGAGGAGCCCCGCTGCC +
Preference number: 5 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSVHSLS*ERSPAA
Trigger: GGCAGCGGGGCTCCTCTCCAAAGAGAGAGAATGCAC...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 90 bp GAGTCCTCCGGGCGGAAGCTAACATTTGGTTTTCTTCTCGGCTTCTaGGCTCTTCCTTCTTGCAGCTCCCTCTTGGCACGCCTGCTTTGC +
Preference number: 5 (lower is better)
Translates to: ESSGRKLTFGFLLGF*ALPSCSSLLARLLC
Trigger: GCAAAGCAGGCGTGCCAAGAGGGAGCTGCAAGAAGGAAGAGCTCAGAAGCCGAGAAGAAAACCAAATGTTAGCTTCCGCCCGGAGGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 90 bp CCTCCACGCTGGCCACCATGTCTTCAACAGCTTTCCAATCAAGTTTaGTCAGGATGCTGCCTGTGCTCTCAGACACGCTGTCCATGCCAC +
Preference number: 5 (lower is better)
Translates to: PPRWPPCLQQLSNQV*SGCCLCSQTRCPCH
Trigger: GTGGCATGGACAGCGTGTCTGAGAGCACAGGCAGCATCCTGAGCAAACTTGATTGGAAAGCTGTTGAAGACATGGTGGCCAGCGTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 90 bp GACGTGCTCCCTGACTGCAGAGGGTTCTCCAAGGTGCTCCCTGACTaGTTACCTAGTGCTGAAGCTGAAAGGGCCTGGCTTTCGAAATGT +
Preference number: 5 (lower is better)
Translates to: DVLPDCRGFSKVLPD*LPSAEAERAWLSKC
Trigger: ACATTTCGAAAGCCAGGCCCTTTCAGCTTCAGCACTAGGTAACCAGTCAGGGAGCACCTTGGAGAACCCTCTGCAGTCAGGGAGCACGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTCAGAGGGCATTCCTGTaGTGCCCAGTGAACACGGAA +
Preference number: 5 (lower is better)
Translates to: AVLDPQNSEGHNSETLASQRAFL*CPVNTE
Trigger: TTCCGTGTTCACTGGGCACAACAGGAATGCCCTCTG...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAGGGCAAGGCCATCTCTaGAGAAGGCAGAGATCAGAG +
Preference number: 5 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRGQGHL*RRQRSE
Trigger: CTCTGATCTCTGCCTTCTCAAGAGATGGCCTTGCCC...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCAAGGAGCAGCGTCACCTaGTCCAGACACACTGTGTGC +
Preference number: 5 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSRSSVT*SRHTVC
Trigger: GCACACAGTGTGTCTGGACAAGGTGACGCTGCTCCT...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 90 bp TCTGCCGGTCTACTTTCATCAGCGGCTGCCGGGACAGCCTCAGGCTaGAGACTGCATGTGCCATTTAAATGGACAGTCACAGTTCGCAGT +
Preference number: 5 (lower is better)
Translates to: SAGLLSSAAAGTASG*RLHVPFKWTVTVRS
Trigger: ACTGCGAACTGTGACTGTCCATTTAAATGGCACATGCAGTCTTCAGCCTGAGGCTGTCCCGGCAGCCGCTGATGAAAGTAGACCGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 90 bp TGGCTCGAATCTGAAGGAGATGGTAACGTGGTATGCACTGTTCTCTaGGACACAGGAGGTTGGCAAGAGTCCGACAGGCTCCAGGCCTCT +
Preference number: 5 (lower is better)
Translates to: WLESEGDGNVVCTVL*DTGGWQESDRLQAS
Trigger: AGAGGCCTGGAGCCTGTCGGACTCTTGCCAACCTCCTGTGTCTCAGAGAACAGTGCATACCACGTTACCATCTCCTTCAGATTCGAGCCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 90 bp TGCTTTGCCTCTGCTTCCCTTGTGTTATCCCAGCTGCGTCCATGCTaGCTCCTACAAAGTGAGGAGCAGCGTCACCTTGTCCAGACACAC +
Preference number: 5 (lower is better)
Translates to: CFASASLVLSQLRPC*LLQSEEQRHLVQTH
Trigger: GTGTGTCTGGACAAGGTGACGCTGCTCCTCACTTTGTAGGAGTCAGCATGGACGCAGCTGGGATAACACAAGGGAAGCAGAGGCAAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 90 bp GAAATAGGCAGCCATGAAGCGGGCCATGCACTGGACAACTCTGAGTaGTGCCTCTGGGTGGACATTTCCAGTCACTGCGATCTCACAATC +
Preference number: 5 (lower is better)
Translates to: EIGSHEAGHALDNSE*CLWVDISSHCDLTI
Trigger: GATTGTGAGATCGCAGTGACTGGAAATGTCCACCCAGAGGCAGCACTCAGAGTTGTCCAGTGCATGGCCCGCTTCATGGCTGCCTATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 90 bp AAGGTGCTCCCTGACTGGTTACCTAGTGCTGAAGCTGAAAGGGCCTaGCTTTCGAAATGTCGGGCACCCACACTGTTTAGAGAGGACAGG +
Preference number: 5 (lower is better)
Translates to: KVLPDWLPSAEAERA*LSKCRAPTLFREDR
Trigger: CCTGTCCTCTCTAAACAGTGTGGGTGCCCGACATTTCGAAAGCCAGGCCCTTTCAGCTTCAGCACTAGGTAACCAGTCAGGGAGCACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 90 bp GTTTTCTTCTCGGCTTCTGAGCTCTTCCTTCTTGCAGCTCCCTCTTaGCACGCCTGCTTTGCCTCTGCTTCCCTTGTGTTATCCCAGCTG +
Preference number: 5 (lower is better)
Translates to: VFFSASELFLLAAPS*HACFASASLVLSQL
Trigger: CAGCTGGGATAACACAAGGGAAGCAGAGGCAAAGCAGGCGTGCCAAGAGGGAGCTGCAAGAAGGAAGAGCTCAGAAGCCGAGAAGAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGACGAAAATTCAGCCCTTaGTCCTTGGGCTCAGACAGC +
Preference number: 5 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRRKFSP*SLGSDS
Trigger: GCTGTCTGAGCCCAAGGACAAAGGGCTGAATTTTCG...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 90 bp TCAGAGCTCCCCTTGACTTTACTGAAGCACACCTGGGAATCAGACTaGACAGAGGGCATTCCTGTTGTGCCCAGTGAACACGGAACAGCA +
Preference number: 5 (lower is better)
Translates to: SELPLTLLKHTWESD*TEGIPVVPSEHGTA
Trigger: TGCTGTTCCGTGTTCACTGGGCACAACAGGAATGCCCTCTGTGCAGTCTGATTCCCAGGTGTGCTTCAGTAAAGTCAAGGGGAGCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 90 bp GGTTGGCAAGAGTCCGACAGGCTCCAGGCCTCTTTTGGTTGGGCCTaGGGCCTGAAAGAAACTTGTGGAATTCTTCCTACAGGTAAGGAA +
Preference number: 5 (lower is better)
Translates to: GWQESDRLQASFGWA*GLKETCGILPTGKE
Trigger: TTCCTTACCTGTAGGAAGAATTCCACAAGTTTCTTTCAGGCCCCAGGCCCAACCAAAAGAGGCCTGGAGCCTGTCGGACTCTTGCCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGATCTCAAGCCTCTGGGTaGAATCAAGAAGCAAGGACC +
Preference number: 5 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRSQASG*NQEART
Trigger: GGTCCTTGCTTCTTGATTCAACCCAGAGGCTTGAGA...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAGGCGCCCAGAAAAGCTaGTCAAAAATGGAATGCCAG +
Preference number: 5 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRGAQKS*SKMECQ
Trigger: CTGGCATTCCATTTTTGACAAGCTTTTCTGGGCGCC...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGTGTGGAGGGTGACTTaGCTGCTTGGTAACTTCATC +
Preference number: 5 (lower is better)
Translates to: AVLDPQNSEGHNSETLASVWRVT*LLGNFI
Trigger: GATGAAGTTACCAAGCAGCAAAGTCACCCTCCACAC...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTCTCTTCCACGTCCTCTaGAGTCTGCAAAGACACTTC +
Preference number: 5 (lower is better)
Translates to: AVLDPQNSEGHNSETLASLFHVL*SLQRHF
Trigger: GAAGTGTCTTTGCAGACTCAAGAGGACGTGGAAGAG...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 90 bp GCTGCCATACAATGTAACTCTGCCGAAGACGGAGCGTGTGGAGGGTaGCTTTGCTGCTTGGTAACTTCATCTGAAGGCTCTTCACAGGCA +
Preference number: 5 (lower is better)
Translates to: AAIQCNSAEDGACGG*LCCLVTSSEGSSQA
Trigger: TGCCTGTGAAGAGCCTTCAGATGAAGTTACCAAGCAGCAAAGTCACCCTCCACACGCTCCGTCTTCGGCAGAGTTACATTGTATGGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 90 bp TGGGCTGTTCTTGCCAGGCTCCCTGGTGCACTCTCCCATGGATTGTaGTCTGGCACTAACTCTCTGTCTGCTGTTGACTTCAATACAATC +
Preference number: 5 (lower is better)
Translates to: WAVLARLPGALSHGL*SGTNSLSAVDFNTI
Trigger: GATTGTATTGAAGTCAACAGCAGACAGAGAGTTAGTGCCAGAGCACAATCCATGGGAGAGTGCACCAGGGAGCCTGGCAAGAACAGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 90 bp ATCTCCACTACTATCTTGATCAGGACGGCTAATTCTTTTGTGGTCTaGTGGGCTGTTCTTGCCAGGCTCCCTGGTGCACTCTCCCATGGA +
Preference number: 5 (lower is better)
Translates to: ISTTILIRTANSFVV*WAVLARLPGALSHG
Trigger: TCCATGGGAGAGTGCACCAGGGAGCCTGGCAAGAACAGCCCAGCAGACCACAAAAGAATTAGCCGTCCTGATCAAGATAGTAGTGGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 90 bp CTCTGTTCCTTGAACTGGAAGTTTTGTTCTAGTATATCTCTGTCCTaGTGTCTGTCAGACGGCGGCGCCACTGAGGGAATCTCAGGCTCC +
Preference number: 5 (lower is better)
Translates to: LCSLNWKFCSSISLS*CLSDGGATEGISGS
Trigger: GGAGCCTGAGATTCCCTCAGTGGCGCCGCCGTCTGACAGACAGCAGGACAGAGATATACTAGAACAAAACTTCCAGTTCAAGGAACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 90 bp AGAAGGCAGAGATCAGAGCTCCCCTTGACTTTACTGAAGCACACCTaGGAATCAGACTGCACAGAGGGCATTCCTGTTGTGCCCAGTGAA +
Preference number: 5 (lower is better)
Translates to: RRQRSELPLTLLKHT*ESDCTEGIPVVPSE
Trigger: TTCACTGGGCACAACAGGAATGCCCTCTGTGCAGTCTGATTCCCAGGTGTGCTTCAGTAAAGTCAAGGGGAGCTCTGATCTCTGCCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 90 bp ACTGGTCCAAGGCCCAGTGCACAGACAGGTTCTTATCCTCCACGCTaGCCACCATGTCTTCAACAGCTTTCCAATCAAGTTTGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: TGPRPSAQTGSYPPR*PPCLQQLSNQVCSG
Trigger: TCCTGAGCAAACTTGATTGGAAAGCTGTTGAAGACATGGTGGCCAGCGTGGAGGATAAGAACCTGTCTGTGCACTGGGCCTTGGACCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCATGCTTTCAGCACTTCTaGCACAGACCCAAACAGCAG +
Preference number: 5 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSCFQHF*HRPKQQ
Trigger: CTGCTGTTTGGGTCTGTGCAAGAAGTGCTGAAAGCA...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAGGGCCTGAAAGAAACTaGTGGAATTCTTCCTACAGG +
Preference number: 5 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRGPERN*WNSSYR
Trigger: CCTGTAGGAAGAATTCCACAAGTTTCTTTCAGGCCC...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTATGACTTCTGAGTCATaGCTAATGAGGGAGTCCTCC +
Preference number: 5 (lower is better)
Translates to: AVLDPQNSEGHNSETLASMTSES*LMRESS
Trigger: GGAGGACTCCCTCATTAGCAATGACTCAGAAGTCAT...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 90 bp AGCAGCCACGACAGCTTCTTTATCTTTCGTGGAAGGCAACGAAACTaGTTCTTCGGGCACAATCTGGGACCACTGACCCACCAAAGAAAG +
Preference number: 5 (lower is better)
Translates to: SSHDSFFIFRGRQRN*FFGHNLGPLTHQRK
Trigger: CTTTCTTTGGTGGGTCAGTGGTCCCAGATTGTGCCCGAAGAAGCAGTTTCGTTGCCTTCCACGAAAGATAAAGAAGCTGTCGTGGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 90 bp CCGAAATCTGTGCACCTTTCTGTTCTGTCAAGTTTGTATCCACGCTaGCGTCTCGTGGTTCTTTCCTGGAACACTGAGCCTCTTCTTCGG +
Preference number: 5 (lower is better)
Translates to: PKSVHLSVLSSLYPR*RLVVLSWNTEPLLR
Trigger: CCGAAGAAGAGGCTCAGTGTTCCAGGAAAGAACCACGAGACGCCAGCGTGGATACAAACTTGACAGAACAGAAAGGTGCACAGATTTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 90 bp TCAGCACTTGAGATGCAGGGAAGTCTTGCTCTATATTTTCTGCCATaGTCTGCACTGCTACCAGCTGCTCATCCATCTCCTGGAGCTTGG +
Preference number: 5 (lower is better)
Translates to: SALEMQGSLALYFLP*SALLPAAHPSPGAW
Trigger: CCAAGCTCCAGGAGATGGATGAGCAGCTGGTAGCAGTGCAGACCATGGCAGAAAATATAGAGCAAGACTTCCCTGCATCTCAAGTGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGACGTATAAGTATAGTCTaGAAGAGCTTGCTACTGCCG +
Preference number: 5 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRRISIV*KSLLLP
Trigger: CGGCAGTAGCAAGCTCTTCAAGACTATACTTATACG...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTCAAGTGGCCCATGTTTaGTCTGTATCTCATATCCCA +
Preference number: 5 (lower is better)
Translates to: AVLDPQNSEGHNSETLASQVAHV*SVSHIP
Trigger: TGGGATATGAGATACAGACAAAACATGGGCCACTTG...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGACGACGGTCCTACTATTaGCATCAGGCTCAGAAAATT +
Preference number: 5 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRRRSYY*HQAQKI
Trigger: AATTTTCTGAGCCTGATGCAAATAGTAGGACCGTCG...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGACACTCTTTGTGGAGTTaGATACTTGGCTTTCCCCAA +
Preference number: 5 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRHSLWS*ILGFPQ
Trigger: TTGGGGAAAGCCAAGTATCAAACTCCACAAAGAGTG...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTTGTCCTAGTTGTTCCTaGGGCTCTATGATGACTTCT +
Preference number: 5 (lower is better)
Translates to: AVLDPQNSEGHNSETLASCPSCS*GSMMTS
Trigger: AGAAGTCATCATAGAGCCCAAGGAACAACTAGGACA...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATAGACACGCAGGAGAGCTaGGACGGGGACACACAGCAG +
Preference number: 5 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDIDTQES*DGDTQQ
Trigger: CTGCTGTGTGTCCCCGTCCAAGCTCTCCTGCGTGTC...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGACCTTACAGAGATGGCTaGATCTGGAGATATGTCTGT +
Preference number: 5 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRPYRDG*IWRYVC
Trigger: ACAGACATATCTCCAGATCAAGCCATCTCTGTAAGG...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 90 bp AACAGGAGCAATCTCATCACCCGTGTCTTTCACGTCATGGTTTTCTaGTTCAGCTGGCATTCTATTCCAGCACTCAGTCCCTTCCTGAGC +
Preference number: 5 (lower is better)
Translates to: NRSNLITRVFHVMVF*FSWHSIPALSPFLS
Trigger: GCTCAGGAAGGGACTGAGTGCTGGAATAGAATGCCAGCTGAAGCAGAAAACCATGACGTGAAAGACACGGGTGATGAGATTGCTCCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 90 bp AGATGCAGGGAAGTCTTGCTCTATATTTTCTGCCATGGTCTGCACTaGTACCAGCTGCTCATCCATCTCCTGGAGCTTGGCAGTAAGATG +
Preference number: 5 (lower is better)
Translates to: RCREVLLYIFCHGLH*YQLLIHLLELGSKM
Trigger: CATCTTACTGCCAAGCTCCAGGAGATGGATGAGCAGCTGGTAGCAGTGCAGACCATGGCAGAAAATATAGAGCAAGACTTCCCTGCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 90 bp AGTTATGTGTGCCGAGTCCGACAGCAGTTCATTCATCAGGCTGTATaGCTGAGAGAGTCGCTGACTATAGTGCTTAGACAGCTGCAACCT +
Preference number: 5 (lower is better)
Translates to: SYVCRVRQQFIHQAV*LRESLTIVLRQLQP
Trigger: AGGTTGCAGCTGTCTAAGCACTATAGTCAGCGACTCTCTCAGGCATACAGCCTGATGAATGAACTGCTGTCGGACTCGGCACACATAACT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 90 bp TTTAAAAGAAGATTGTCACCATGTTCTTCACTAAGAACAGCTGGCTaGGGGCAATACAGCGGAGGCGCTGGAAGATACAAGTCGACGGGC +
Preference number: 5 (lower is better)
Translates to: FKRRLSPCSSLRTAG*GQYSGGAGRYKSTG
Trigger: GCCCGTCGACTTGTATCTTCCAGCGCCTCCGCTGTATTGCCCCCAGCCAGCTGTTCTTAGTGAAGAACATGGTGACAATCTTCTTTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCAATGTTTACAGAACACTaGGTAGGCCACACCAATGGA +
Preference number: 5 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSMFTEH*VGHTNG
Trigger: TCCATTGGTGTGGCCTACCAAGTGTTCTGTAAACAT...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTTTGGACCGCGCAAAATaGCAATCATGTTTACAGAAC +
Preference number: 5 (lower is better)
Translates to: AVLDPQNSEGHNSETLASLDRAK*QSCLQN
Trigger: GTTCTGTAAACATGATTGCAATTTTGCGCGGTCCAA...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCAAAGCAACCTAGGGCTTaGATGGAAACTTCATCAAGC +
Preference number: 5 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSKQPRA*METSSS
Trigger: GCTTGATGAAGTTTCCATCAAAGCCCTAGGTTGCTT...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTACTCTCTGTCTGCTGTaGACTTCAATACAATCACTC +
Preference number: 5 (lower is better)
Translates to: AVLDPQNSEGHNSETLASTLCLL*TSIQSL
Trigger: GAGTGATTGTATTGAAGTCAACAGCAGACAGAGAGT...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATACCAGGCCTCTTTTGGTaGGGCCTGGGGCCTGAAAGA +
Preference number: 5 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDIPGLFW*GLGPER
Trigger: TCTTTCAGGCCCCAGGCCCAACCAAAAGAGGCCTGG...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAGTGTGCCAGTTTTTGTaGGCTTCTTTTAAATGCCAG +
Preference number: 5 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRVCQFL*ASFKCQ
Trigger: CTGGCATTTAAAAGAAGCCAACAAAAACTGGCACAC...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTTGCAGATTCTTGACTTaGAAAAGTATGAGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: AVLDPQNSEGHNSETLASCRFLT*KSMRRS
Trigger: GCTCCTCCTCATACTTTTCAAAGTCAAGAATCTGCA...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 90 bp CAGATTCTTGACTTTGAAAAGTATGAGGAGGAGCGGCATCGACAATaGAAGCTGCCATACAATGTAACTCTGCCGAAGACGGAGCGTGTG +
Preference number: 5 (lower is better)
Translates to: QILDFEKYEEERHRQ*KLPYNVTLPKTERV
Trigger: CACACGCTCCGTCTTCGGCAGAGTTACATTGTATGGCAGCTTCCATTGTCGATGCCGCTCCTCCTCATACTTTTCAAAGTCAAGAATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGATCTTTGTATTTTCTCTaGCTTTCTGATACTGCCTGC +
Preference number: 5 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRSLYFL*LSDTAC
Trigger: GCAGGCAGTATCAGAAAGCAAGAGAAAATACAAAGA...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTTTTAAACATCTCATCTaGGAGCATCTGCCTAACAGA +
Preference number: 5 (lower is better)
Translates to: AVLDPQNSEGHNSETLASFKHLI*EHLPNR
Trigger: TCTGTTAGGCAGATGCTCCAAGATGAGATGTTTAAA...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAACTGTGTGCCAGTTTTaGTTGGCTTCTTTTAAATGC +
Preference number: 5 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRTVCQF*LASFKC
Trigger: GCATTTAAAAGAAGCCAACAAAAACTGGCACACAGT...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATACTGAGCTCTTCCTTCTaGCAGCTCCCTCTTGGCACG +
Preference number: 5 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDILSSSF*QLPLGT
Trigger: CGTGCCAAGAGGGAGCTGCAAGAAGGAAGAGCTCAG...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 90 bp CACCTGGGAATCAGACTGCACAGAGGGCATTCCTGTTGTGCCCAGTaGACACGGAACAGCAAGGACCTTACAGATGTAAATATATTCTCA +
Preference number: 5 (lower is better)
Translates to: HLGIRLHRGHSCCAQ*TRNSKDLTDVNIFS
Trigger: TGAGAATATATTTACATCTGTAAGGTCCTTGCTGTTCCGTGTTCACTGGGCACAACAGGAATGCCCTCTGTGCAGTCTGATTCCCAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 90 bp AAAAACCGAGAGAATGGTAGCATCCTACAGGCCCATTCCAGTGCATaGAAACAGTGCTCAACCACACAAGAATCAAACCCTACCTCGAGG +
Preference number: 5 (lower is better)
Translates to: KNRENGSILQAHSSA*KQCSTTQESNPTSR
Trigger: CCTCGAGGTAGGGTTTGATTCTTGTGTGGTTGAGCACTGTTTTCATGCACTGGAATGGGCCTGTAGGATGCTACCATTCTCTCGGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 90 bp GGAACACTCCCATGCGGAATATCCTGTGTATCTCCACTACTATCTTaGTCAGGACGGCTAATTCTTTTGTGGTCTGCTGGGCTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: GTLPCGISCVSPLLS*SGRLILLWSAGLFL
Trigger: CAAGAACAGCCCAGCAGACCACAAAAGAATTAGCCGTCCTGATCAAGATAGTAGTGGAGATACACAGGATATTCCGCATGGGAGTGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 90 bp TGGGAAGGACCTTCCTTATCTGGGTCTGTGTTTGTACTCGCATCATaGCTTCCCACTGCTTTCTTTCGTACAGAGGCCATGAAATGCAGT +
Preference number: 5 (lower is better)
Translates to: WEGPSLSGSVFVLAS*LPTAFFRTEAMKCS
Trigger: ACTGCATTTCATGGCCTCTGTACGAAAGAAAGCAGTGGGAAGTCATGATGCGAGTACAAACACAGACCCAGATAAGGAAGGTCCTTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 90 bp CTTCCACGTCCTCTTGAGTCTGCAAAGACACTTCTTCAGAAATGCTaGTGGCCTTTGAAGCTAGTAGCTTTTCAATGTCAGGGCCGGAAG +
Preference number: 5 (lower is better)
Translates to: LPRPLESAKTLLQKC*WPLKLVAFQCQGRK
Trigger: CTTCCGGCCCTGACATTGAAAAGCTACTAGCTTCAAAGGCCATCAGCATTTCTGAAGAAGTGTCTTTGCAGACTCAAGAGGACGTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 90 bp TTGGGCTCAGACAGCATCATACTCTGGTATGCTTTCTCAAGCCTCTaGGTTGAATCAAGAAGCAAGGACCTCATGAGCATTGTTGGAGAC +
Preference number: 5 (lower is better)
Translates to: LGSDSIILWYAFSSL*VESRSKDLMSIVGD
Trigger: GTCTCCAACAATGCTCATGAGGTCCTTGCTTCTTGATTCAACCCAGAGGCTTGAGAAAGCATACCAGAGTATGATGCTGTCTGAGCCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 90 bp TCTCTGAAGCAACCTAGGGCTTTGATGGAAACTTCATCAAGCGTGTaGTCTCCAGTCGCTCCAGGTCTAAAGAATGCTATCCCTCCTTTA +
Preference number: 5 (lower is better)
Translates to: SLKQPRALMETSSSV*SPVAPGLKNAIPPL
Trigger: TAAAGGAGGGATAGCATTCTTTAGACCTGGAGCGACTGGAGACCACACGCTTGATGAAGTTTCCATCAAAGCCCTAGGTTGCTTCAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 90 bp AATCTGTGTCTTCCGGGTTTAATGGACTCGGGTACCCAAAAGGAATaGTTTGATGATCTCTGCACTGTGGGCTTCTCTCGCTTGTCATCT +
Preference number: 5 (lower is better)
Translates to: NLCLPGLMDSGTQKE*FDDLCTVGFSRLSS
Trigger: AGATGACAAGCGAGAGAAGCCCACAGTGCAGAGATCATCAAACCATTCCTTTTGGGTACCCGAGTCCATTAAACCCGGAAGACACAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTTCTGAACAAGATTaGTCACTTGAGGATAAATCT +
Preference number: 5 (lower is better)
Translates to: AVLDPQNSEGHNSETLASASEQD*SLEDKS
Trigger: AGATTTATCCTCAAGTGACAAATCTTGTTCAGAAGC...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATAAAGCCCCACAGCTTCTaGCTGAAGTCCTTAGCGGAG +
Preference number: 5 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDIKPHSF*LKSLAE
Trigger: CTCCGCTAAGGACTTCAGCAAGAAGCTGTGGGGCTT...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTATCATCTTCCTTCCTTaGGGAGTTTTCTTTCTGATT +
Preference number: 5 (lower is better)
Translates to: AVLDPQNSEGHNSETLASIIFLP*GVFFLI
Trigger: AATCAGAAAGAAAACTCCCAAAGGAAGGAAGATGAT...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAGGCGTCGTTTTAATGTaGTGTGTACATCAAAAAGTA +
Preference number: 5 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRGVVLM*CVHQKV
Trigger: TACTTTTTGATGTACACACAACATTAAAACGACGCC...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGACTGGAACTCTATACATaGGCTTTTGTTTTAAGCCAA +
Preference number: 5 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRLELYT*AFVLSQ
Trigger: TTGGCTTAAAACAAAAGCCAATGTATAGAGTTCCAG...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp ACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGAATGTCAAGGATTGGGTCACTTTaGCAGGTTCAGAAATTAAAC +
Preference number: 5 (lower is better)
Translates to: TLRATTVRLWPVLGKRMSRIGSL*QVQKLN
Trigger: GTTTAATTTCTGAACCTGCAAAAGTGACCCAATCCT...TGACATTCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp GCAGTCTTAGACCCACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTTTTGTACTCTGTTCCTaGAACTGGAAGTTTTGTTCT +
Preference number: 5 (lower is better)
Translates to: AVLDPQNSEGHNSETLASFVLCS*NWKFCS
Trigger: AGAACAAAACTTCCAGTTCAAGGAACAGAGTACAAA...ACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTGGGTCTAAGACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp CACAGAACTCTGAGGGCCACAACAGTGAGACTCTGGCCAGTGCTGGGAAAGAGACTTTCAAGTAATTCATaGCTGTCATTCAAACCAGGA +
Preference number: 5 (lower is better)
Translates to: HRTLRATTVRLWPVLGKRLSSNS*LSFKPG
Trigger: TCCTGGTTTGAATGACAGCAATGAATTACTTGAAAG...TCTCTTTCCCAGCACTGGCCAGAGTCTCACTGTTGTGGCCCTCAGAGTTCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 90 bp GTGGAAGGCAACGAAACTGCTTCTTCGGGCACAATCTGGGACCACTaGCCCACCAAAGAAAGGCTTTTAGAAGACAAGATATTCTTCAGT +
Preference number: 5 (lower is better)
Translates to: VEGNETASSGTIWDH*PTKERLLEDKIFFS
Trigger: ACTGAAGAATATCTTGTCTTCTAAAAGCCTTTCTTTGGTGGGTCAGTGGTCCCAGATTGTGCCCGAAGAAGCAGTTTCGTTGCCTTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 90 bp CTCAGACAGCATCATACTCTGGTATGCTTTCTCAAGCCTCTGGGTTaGATCAAGAAGCAAGGACCTCATGAGCATTGTTGGAGACTGGTT +
Preference number: 5 (lower is better)
Translates to: LRQHHTLVCFLKPLG*IKKQGPHEHCWRLV
Trigger: AACCAGTCTCCAACAATGCTCATGAGGTCCTTGCTTCTTGATTCAACCCAGAGGCTTGAGAAAGCATACCAGAGTATGATGCTGTCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 90 bp AGGCAAGCCAAAAGCCTCTCTGAGAATGACCCATGTTCTTGTCGCTaGGTCAGTAAGAGCTTTACAGTATTTGCGGTGAGCCTTATCAAG +
Preference number: 5 (lower is better)
Translates to: RQAKSLSENDPCSCR*VSKSFTVFAVSLIK
Trigger: CTTGATAAGGCTCACCGCAAATACTGTAAAGCTCTTACTGACTCAGCGACAAGAACATGGGTCATTCTCAGAGAGGCTTTTGGCTTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 90 bp CAGTCACCTGGAGCTGATCTTCTGAACCACTTTCAAGTAATTCATTaGTGTCATTCAAACCAGGAGAAGGGATGTTCCAGCCCACAGAAG +
Preference number: 5 (lower is better)
Translates to: QSPGADLLNHFQVIH*CHSNQEKGCSSPQK
Trigger: CTTCTGTGGGCTGGAACATCCCTTCTCCTGGTTTGAATGACAGCAATGAATTACTTGAAAGTGGTTCAGAAGATCAGCTCCAGGTGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 90 bp TGGACTCGGGTACCCAAAAGGAATGGTTTGATGATCTCTGCACTGTaGGCTTCTCTCGCTTGTCATCTGGAACTCTATACATTGGCTTTT +
Preference number: 5 (lower is better)
Translates to: WTRVPKRNGLMISAL*ASLACHLELYTLAF
Trigger: AAAAGCCAATGTATAGAGTTCCAGATGACAAGCGAGAGAAGCCCACAGTGCAGAGATCATCAAACCATTCCTTTTGGGTACCCGAGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 90 bp TCTCTGTCTGCTGTTGACTTCAATACAATCACTCTTTGTGGAGTTTaGTACTTGGCTTTCCCCAAAACGCACAGACTGAGCCTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: SLSAVDFNTITLCGV*YLAFPKTHRLSLLK
Trigger: CTTCAGCAGGCTCAGTCTGTGCGTTTTGGGGAAAGCCAAGTATCAAACTCCACAAAGAGTGATTGTATTGAAGTCAACAGCAGACAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 90 bp GGTTTAATGGACTCGGGTACCCAAAAGGAATGGTTTGATGATCTCTaGACTGTGGGCTTCTCTCGCTTGTCATCTGGAACTCTATACATT +
Preference number: 5 (lower is better)
Translates to: GLMDSGTQKEWFDDL*TVGFSRLSSGTLYI
Trigger: AATGTATAGAGTTCCAGATGACAAGCGAGAGAAGCCCACAGTGCAGAGATCATCAAACCATTCCTTTTGGGTACCCGAGTCCATTAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 90 bp TGGGTTGAATCAAGAAGCAAGGACCTCATGAGCATTGTTGGAGACTaGTTATCAAGAAACCGAAGGGTTGTGACCATGTATCCATCAGAG +
Preference number: 5 (lower is better)
Translates to: WVESRSKDLMSIVGD*LSRNRRVVTMYPSE
Trigger: CTCTGATGGATACATGGTCACAACCCTTCGGTTTCTTGATAACCAGTCTCCAACAATGCTCATGAGGTCCTTGCTTCTTGATTCAACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 90 bp AAAGCTGTGGAACTTTCAAAGGTTCATGGCCTGAGCTTGCAGCCGTaGCTTGTGGGTTTTTACTACTTTCTGAATCAGCTTTTTGGGAAG +
Preference number: 5 (lower is better)
Translates to: KAVELSKVHGLSLQP*LVGFYYFLNQLFGK
Trigger: CTTCCCAAAAAGCTGATTCAGAAAGTAGTAAAAACCCACAAGCCACGGCTGCAAGCTCAGGCCATGAACCTTTGAAAGTTCCACAGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATAAGATCAGAGCTCCCCTaGACTTTACTGAAGCACACC +
Preference number: 5 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDIRSELP*TLLKHT
Trigger: GGTGTGCTTCAGTAAAGTCAAGGGGAGCTCTGATCT...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATATTCCTCTGCATCCTTTaGCTCTTCCACGTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDIFLCIL*LFHVLL
Trigger: CAAGAGGACGTGGAAGAGCAAAAGGATGCAGAGGAA...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATACTCACGCTTCATCTTTaGCCTTTGCCTGATCTGCCT +
Preference number: 5 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDILTLHL*PLPDLP
Trigger: AGGCAGATCAGGCAAAGGCAAAAGATGAAGCGTGAG...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATAGCTTTCCAATCAAGTTaGCTCAGGATGCTGCCTGTG +
Preference number: 5 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDIAFQSS*LRMLPV
Trigger: CACAGGCAGCATCCTGAGCAAACTTGATTGGAAAGC...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 90 bp CATTGTTTCTTCTGCCTGCAAAAATCTGGGGACAGTGCAATGTACTaGACTTTCCTTTCCTTGATGCTTCAACAGGCTAGACCTCAAGGA +
Preference number: 5 (lower is better)
Translates to: HCFFCLQKSGDSAMY*TFLSLMLQQARPQG
Trigger: TCCTTGAGGTCTAGCCTGTTGAAGCATCAAGGAAAGGAAAGTTCAGTACATTGCACTGTCCCCAGATTTTTGCAGGCAGAAGAAACAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 90 bp CATGTTCTTGTCGCTGAGTCAGTAAGAGCTTTACAGTATTTGCGGTaGGCCTTATCAAGTGGCCCATGTTTTGTCTGTATCTCATATCCC +
Preference number: 5 (lower is better)
Translates to: HVLVAESVRALQYLR*ALSSGPCFVCISYP
Trigger: GGGATATGAGATACAGACAAAACATGGGCCACTTGATAAGGCTCACCGCAAATACTGTAAAGCTCTTACTGACTCAGCGACAAGAACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 90 bp GAAACAATGTCTGCATCAGCCATAACTGATGCTTTCAGCACTTCTTaGACAGACCCAAACAGCAGACTAGCATCTTCTTCTTCAATGGGA +
Preference number: 5 (lower is better)
Translates to: ETMSASAITDAFSTS*TDPNSRLASSSSMG
Trigger: TCCCATTGAAGAAGAAGATGCTAGTCTGCTGTTTGGGTCTGTGCAAGAAGTGCTGAAAGCATCAGTTATGGCTGATGCAGACATTGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATATCCATCTCCTGGAGCTaGGCAGTAAGATGTTCAAAC +
Preference number: 5 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDISISWS*AVRCSN
Trigger: GTTTGAACATCTTACTGCCAAGCTCCAGGAGATGGA...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 90 bp AATCTGAACAATCTTGACTTTCTCTTACAGGTAACTGGGACCGGCTaGGTAGTTCCCGTACTAGATGATCACATAACCCTTGAGCATCAT +
Preference number: 5 (lower is better)
Translates to: NLNNLDFLLQVTGTG*VVPVLDDHITLEHH
Trigger: ATGATGCTCAAGGGTTATGTGATCATCTAGTACGGGAACTACTCAGCCGGTCCCAGTTACCTGTAAGAGAAAGTCAAGATTGTTCAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 90 bp AAAGCAGGGACTGTCCCACAGAGTCCAATTTTGTACTCTGTTCCTTaGACTGGAAGTTTTGTTCTAGTATATCTCTGTCCTGCTGTCTGT +
Preference number: 5 (lower is better)
Translates to: KAGTVPQSPILYSVP*TGSFVLVYLCPAVC
Trigger: ACAGACAGCAGGACAGAGATATACTAGAACAAAACTTCCAGTTCAAGGAACAGAGTACAAAATTGGACTCTGTGGGACAGTCCCTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATATATCTGGGTCTGTGTTaGTACTCGCATCATGACTTC +
Preference number: 5 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDIYLGLC*YSHHDF
Trigger: GAAGTCATGATGCGAGTACAAACACAGACCCAGATA...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 90 bp AGTTCTGCAGTGTTTCTGTCTGTCTCCTTGGAAGCATCCTTTGCATaGACTGTATCAAACATAGATGCAAACTCCAATCTTCCTTCCTTG +
Preference number: 5 (lower is better)
Translates to: SSAVFLSVSLEASFA*TVSNIDANSNLPSL
Trigger: CAAGGAAGGAAGATTGGAGTTTGCATCTATGTTTGATACAGTTCATGCAAAGGATGCTTCCAAGGAGACAGACAGAAACACTGCAGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATAAACAGCTTCATTTTCTaGACCCAACCAGGATACTCT +
Preference number: 5 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDINSFIF*TQPGYS
Trigger: AGAGTATCCTGGTTGGGTCAAGAAAATGAAGCTGTT...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS-3UTR CAA 90 bp TTTCCATCTTGGAATGAATGGTTAACCCAGAGAAGCCTATGGCTGCAGGATATAAGATGCAGGGAAGTCTaGCTCTATATTTTCTGCCAT +
Preference number: 5 (lower is better)
Translates to: FPSWNEWLTQRSLWLQDIRCREV*LYIFCH
Trigger: ATGGCAGAAAATATAGAGCAAGACTTCCCTGCATCT...TATATCCTGCAGCCATAGGCTTCTCTGGGTTAACCATTCATTCCAAGATGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 90 bp TCATTAGTGGATGTCGCCAGGAAAACAACATCCTTCAACAAAGGCTaGAAACTAGGGATCTTCTTCTTTGTTCTTCCTGACAGCAAATTA +
Preference number: 5 (lower is better)
Translates to: SLVDVARKTTSFNKG*KLGIFFFVLPDSKL
Trigger: TAATTTGCTGTCAGGAAGAACAAAGAAGAAGATCCCTAGTTTGCAGCCTTTGTTGAAGGATGTTGTTTTCCTGGCGACATCCACTAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 90 bp TATCTTTGTATTTTCTCTTGCTTTCTGATACTGCCTGCAAGTGTATaGCAATTTATCCCGGACATGCAACATCCAGCACAAAGCACAAAG +
Preference number: 5 (lower is better)
Translates to: YLCIFSCFLILPASV*QFIPDMQHPAQSTK
Trigger: CTTTGTGCTTTGTGCTGGATGTTGCATGTCCGGGATAAATTGTCATACACTTGCAGGCAGTATCAGAAAGCAAGAGAAAATACAAAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 90 bp ATTAAGTTCATGTTCTCTAAGGCGCCCAGAAAAGCTTGTCAAAAATaGAATGCCAGGGTCACTGGAACAAAGGTCTCTTTCAAGAATATA +
Preference number: 5 (lower is better)
Translates to: IKFMFSKAPRKACQK*NARVTGTKVSFKNI
Trigger: TATATTCTTGAAAGAGACCTTTGTTCCAGTGACCCTGGCATTCCATTTTTGACAAGCTTTTCTGGGCGCCTTAGAGAACATGAACTTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 90 bp AAGCAGGAACCAGCTCTGTACACATTCTCACTGATGGTCTTGCTCTaGCGTCGTTTTAATGTTGTGTGTACATCAAAAAGTAAAGAATTA +
Preference number: 5 (lower is better)
Translates to: KQEPALYTFSLMVLL*RRFNVVCTSKSKEL
Trigger: TAATTCTTTACTTTTTGATGTACACACAACATTAAAACGACGCCAGAGCAAGACCATCAGTGAGAATGTGTACAGAGCTGGTTCCTGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 90 bp AATAATTCGAGGGTATATTCAACTGTCCACACATTTGAGAGATTCTaGTCTCTAATAACACTGGCCACCTTAGAGTGTTGTAGAGGAATA +
Preference number: 5 (lower is better)
Translates to: NNSRVYSTVHTFERF*SLITLATLECCRGI
Trigger: TATTCCTCTACAACACTCTAAGGTGGCCAGTGTTATTAGAGATCAGAATCTCTCAAATGTGTGGACAGTTGAATATACCCTCGAATTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 72 bp CTCTTCCCTCTCATCCTCTCTGCACGCCTGCTGCACTaGAGGACCCACGCCAGCAGCCCCACGGCTTCTCAG +
Preference number: 6 (lower is better)
Translates to: LFPLILSARLLH*RTHASSPTASQ
Trigger: CTGAGAAGCCGTGGGGCTGCTGGCGTGGGTCCTCCAGTGCAGCAGGCGTGCAGAGAGGATGAGAGGGAAGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 72 bp GGCAGGAGGAAAGGAAGCAGGTGCGAAGCTCCGAGGTaGTCCAGTCTGTCCTCTCACCTCAGGCTGGCCATC +
Preference number: 6 (lower is better)
Translates to: GRRKGSRCEAPR*SSLSSHLRLAI
Trigger: GATGGCCAGCCTGAGGTGAGAGGACAGACTGGAGCACCTCGGAGCTTCGCACCTGCTTCCTTTCCTCCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 72 bp GAGAGCTTGGACGGGGACACACAGCAGGGCTTGGTGTaGGACACGCAGGAGAGGCATTCTGTAGCAGGGTCC +
Preference number: 6 (lower is better)
Translates to: ESLDGDTQQGLV*DTQERHSVAGS
Trigger: GGACCCTGCTACAGAATGCCTCTCCTGCGTGTCCCACACCAAGCCCTGCTGTGTGTCCCCGTCCAAGCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CAA 72 bp ACGCAGGAGAGCTTGGACGGGGACACACAGCAGGGCTaGGTGTGGGACACGCAGGAGAGGCATTCTGTAGCA +
Preference number: 6 (lower is better)
Translates to: TQESLDGDTQQG*VWDTQERHSVA
Trigger: TGCTACAGAATGCCTCTCCTGCGTGTCCCACACCAAGCCCTGCTGTGTGTCCCCGTCCAAGCTCTCCTGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CAA 90 bp CTGGGCCCCAGGGAGAACCTGTCCGCAGCAGGAGTGGCAGCGGGCTaGTCTTCTTCATCAGGCTCCCAGATATCCATCTCAAAAGCACCT +
Preference number: 6 (lower is better)
Translates to: LGPRENLSAAGVAAG*SSSSGSQISISKAP
Trigger: AGGTGCTTTTGAGATGGATATCTGGGAGCCTGATGAAGAAGACAAGCCCGCTGCCACTCCTGCTGCGGACAGGTTCTCCCTGGGGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 72 bp CTTCCTTCTTGCAGCTCCCTCTTGGCACGCCTGCTTTaGCTCTGCTTCCCTTGTGTTATCCCAGCTGCGTCC +
Preference number: 6 (lower is better)
Translates to: LPSCSSLLARLL*LCFPCVIPAAS
Trigger: GGACGCAGCTGGGATAACACAAGGGAAGCAGAGGCAAAGCAGGCGTGCCAAGAGGGAGCTGCAAGAAGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CAA 72 bp CTCCCTCTTGGCACGCCTGCTTTGCCTCTGCTTCCCTaGTGTTATCCCAGCTGCGTCCATGCTGACTCCTAC +
Preference number: 6 (lower is better)
Translates to: LPLGTPALPLLP*CYPSCVHADSY
Trigger: GTAGGAGTCAGCATGGACGCAGCTGGGATAACACAAGGGAAGCAGAGGCAAAGCAGGCGTGCCAAGAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 72 bp AGCCATGAAGCGGGCCATGCACTGGACAACTCTGAGTaGTGCCTCTGGGTGGACATTTCCAGTCACTGCGAT +
Preference number: 6 (lower is better)
Translates to: SHEAGHALDNSE*CLWVDISSHCD
Trigger: ATCGCAGTGACTGGAAATGTCCACCCAGAGGCAGCACTCAGAGTTGTCCAGTGCATGGCCCGCTTCATGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 72 bp CCGACGTGCTCCCTGACTGCAGAGGGTTCTCCAAGGTaGTCCCTGACTGGTTACCTAGTGCTGAAGCTGAAA +
Preference number: 6 (lower is better)
Translates to: PTCSLTAEGSPR*SLTGYLVLKLK
Trigger: TTTCAGCTTCAGCACTAGGTAACCAGTCAGGGAGCACCTTGGAGAACCCTCTGCAGTCAGGGAGCACGTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 72 bp GCGGGCCATGCACTGGACAACTCTGAGTGCTGCCTCTaGGTGGACATTTCCAGTCACTGCGATCTCACAATC +
Preference number: 6 (lower is better)
Translates to: AGHALDNSECCL*VDISSHCDLTI
Trigger: GATTGTGAGATCGCAGTGACTGGAAATGTCCACCCAGAGGCAGCACTCAGAGTTGTCCAGTGCATGGCCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 72 bp CCTGACTGCAGAGGGTTCTCCAAGGTGCTCCCTGACTaGTTACCTAGTGCTGAAGCTGAAAGGGCCTGGCTT +
Preference number: 6 (lower is better)
Translates to: PDCRGFSKVLPD*LPSAEAERAWL
Trigger: AAGCCAGGCCCTTTCAGCTTCAGCACTAGGTAACCAGTCAGGGAGCACCTTGGAGAACCCTCTGCAGTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CAA 72 bp AGGGAGAACCTGTCCGCAGCAGGAGTGGCAGCGGGCTaGTCTTCTTCATCAGGCTCCCAGATATCCATCTCA +
Preference number: 6 (lower is better)
Translates to: RENLSAAGVAAG*SSSSGSQISIS
Trigger: TGAGATGGATATCTGGGAGCCTGATGAAGAAGACAAGCCCGCTGCCACTCCTGCTGCGGACAGGTTCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CAA 72 bp TCTTCCTTCTTGCAGCTCCCTCTTGGCACGCCTGCTTaGCCTCTGCTTCCCTTGTGTTATCCCAGCTGCGTC +
Preference number: 6 (lower is better)
Translates to: SSFLQLPLGTPA*PLLPLCYPSCV
Trigger: GACGCAGCTGGGATAACACAAGGGAAGCAGAGGCAAAGCAGGCGTGCCAAGAGGGAGCTGCAAGAAGGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 72 bp AATGCTCTGATGAGAGCTGTGACTCTGGCCTGCAGATaGCAGCACTGGGACCTCTCAGACTCTCAACGGGTC +
Preference number: 6 (lower is better)
Translates to: NALMRAVTLACR*QHWDLSDSQRV
Trigger: GACCCGTTGAGAGTCTGAGAGGTCCCAGTGCTGTCATCTGCAGGCCAGAGTCACAGCTCTCATCAGAGCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 72 bp CATCAGCGGCTGCCGGGACAGCCTCAGGCTGAAGACTaGATGTGCCATTTAAATGGACAGTCACAGTTCGCA +
Preference number: 6 (lower is better)
Translates to: HQRLPGQPQAED*MCHLNGQSQFA
Trigger: TGCGAACTGTGACTGTCCATTTAAATGGCACATGCAGTCTTCAGCCTGAGGCTGTCCCGGCAGCCGCTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 72 bp CTTGCCAGGCTCCCTGGTGCACTCTCCCATGGATTGTaGTCTGGCACTAACTCTCTGTCTGCTGTTGACTTC +
Preference number: 6 (lower is better)
Translates to: LARLPGALSHGL*SGTNSLSAVDF
Trigger: GAAGTCAACAGCAGACAGAGAGTTAGTGCCAGAGCACAATCCATGGGAGAGTGCACCAGGGAGCCTGGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 72 bp GTTCACATGCTTCGGGATGCCGGTGAGGACAGCCTCTaGTTTTCTCATGGCTTCCGCATTACAGTGGCTCGA +
Preference number: 6 (lower is better)
Translates to: VHMLRDAGEDSL*FSHGFRITVAR
Trigger: TCGAGCCACTGTAATGCGGAAGCCATGAGAAAAGCAGAGGCTGTCCTCACCGGCATCCCGAAGCATGTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 72 bp CCTGCTTTGCCTCTGCTTCCCTTGTGTTATCCCAGCTaGGTCCATGCTGACTCCTACAAAGTGAGGAGCAGC +
Preference number: 6 (lower is better)
Translates to: PALPLLPLCYPS*VHADSYKVRSS
Trigger: GCTGCTCCTCACTTTGTAGGAGTCAGCATGGACGCAGCTGGGATAACACAAGGGAAGCAGAGGCAAAGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 72 bp GAGAACACTCACACTGTGAGGCGGCAGGATGAAGAGTaGCTCATTGGTGAAATAGGCAGCCATGAAGCGGGC +
Preference number: 6 (lower is better)
Translates to: ENTHTVRRQDEE*LIGEIGSHEAG
Trigger: GCCCGCTTCATGGCTGCCTATTTCACCAATGAGCCACTCTTCATCCTGCCGCCTCACAGTGTGAGTGTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 72 bp AGGTTGGCAAGAGTCCGACAGGCTCCAGGCCTCTTTTaGTTGGGCCTGGGGCCTGAAAGAAACTTGTGGAAT +
Preference number: 6 (lower is better)
Translates to: RLARVRQAPGLF*LGLGPERNLWN
Trigger: ATTCCACAAGTTTCTTTCAGGCCCCAGGCCCAACCAAAAGAGGCCTGGAGCCTGTCGGACTCTTGCCAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 72 bp TCGGCTTCTGAGCTCTTCCTTCTTGCAGCTCCCTCTTaGCACGCCTGCTTTGCCTCTGCTTCCCTTGTGTTA +
Preference number: 6 (lower is better)
Translates to: SASELFLLAAPS*HACFASASLVL
Trigger: TAACACAAGGGAAGCAGAGGCAAAGCAGGCGTGCCAAGAGGGAGCTGCAAGAAGGAAGAGCTCAGAAGCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CAA 72 bp GGACGGCTAATTCTTTTGTGGTCTGCTGGGCTGTTCTaGCCAGGCTCCCTGGTGCACTCTCCCATGGATTGT +
Preference number: 6 (lower is better)
Translates to: GRLILLWSAGLF*PGSLVHSPMDC
Trigger: ACAATCCATGGGAGAGTGCACCAGGGAGCCTGGCAAGAACAGCCCAGCAGACCACAAAAGAATTAGCCGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CAA 90 bp CTAGGGCAAGGCCATCTCTTGAGAAGGCAGAGATCAGAGCTCCCCTaGACTTTACTGAAGCACACCTGGGAATCAGACTGCACAGAGGGC +
Preference number: 6 (lower is better)
Translates to: LGQGHLLRRQRSELP*TLLKHTWESDCTEG
Trigger: GCCCTCTGTGCAGTCTGATTCCCAGGTGTGCTTCAGTAAAGTCAAGGGGAGCTCTGATCTCTGCCTTCTCAAGAGATGGCCTTGCCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CAA 90 bp TCCTCCACGCTGGCCACCATGTCTTCAACAGCTTTCCAATCAAGTTaGCTCAGGATGCTGCCTGTGCTCTCAGACACGCTGTCCATGCCA +
Preference number: 6 (lower is better)
Translates to: SSTLATMSSTAFQSS*LRMLPVLSDTLSMP
Trigger: TGGCATGGACAGCGTGTCTGAGAGCACAGGCAGCATCCTGAGCAAACTTGATTGGAAAGCTGTTGAAGACATGGTGGCCAGCGTGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 72 bp GCGCCACTGAGGGAATCTCAGGCTCCTTTGCTTCGATaGCACTTTTTCTCCAGCTTTCCCCACTCTGACAGG +
Preference number: 6 (lower is better)
Translates to: APLRESQAPLLR*HFFSSFPHSDR
Trigger: CCTGTCAGAGTGGGGAAAGCTGGAGAAAAAGTGTCATCGAAGCAAAGGAGCCTGAGATTCCCTCAGTGGCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 72 bp CCTGGGAATCAGACTGCACAGAGGGCATTCCTGTTGTaGCCAGTGAACACGGAACAGCAAGGACCTTACAGA +
Preference number: 6 (lower is better)
Translates to: PGNQTAQRAFLL*PVNTEQQGPYR
Trigger: TCTGTAAGGTCCTTGCTGTTCCGTGTTCACTGGGCACAACAGGAATGCCCTCTGTGCAGTCTGATTCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 72 bp GATGTACCACTGCGCTACAGGAAAAGAACACCGAGATaGCCGGAAAAGCAGGAGAACTCGCTGCAGGATTCC +
Preference number: 6 (lower is better)
Translates to: DVPLRYRKRTPR*PEKQENSLQDS
Trigger: GGAATCCTGCAGCGAGTTCTCCTGCTTTTCCGGGCATCTCGGTGTTCTTTTCCTGTAGCGCAGTGGTACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 72 bp AATCCTGCCCTTCTTTCCCAGTTCATGACATCAGACTaGAGAGGGTTCTCCGACGTGCTCCCTGACTGCAGA +
Preference number: 6 (lower is better)
Translates to: NPALLSQFMTSD*RGFSDVLPDCR
Trigger: TCTGCAGTCAGGGAGCACGTCGGAGAACCCTCTGCAGTCTGATGTCATGAACTGGGAAAGAAGGGCAGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 72 bp TGGCATTCTATTCCAGCACTCAGTCCCTTCCTGAGCTaGTACTGCAGCTGGACAGTCAGCATCAACGTCGCT +
Preference number: 6 (lower is better)
Translates to: WHSIPALSPFLS*YCSWTVSINVA
Trigger: AGCGACGTTGATGCTGACTGTCCAGCTGCAGTAGCAGCTCAGGAAGGGACTGAGTGCTGGAATAGAATGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 72 bp CAGCTTTCCAATCAAGTTTGCTCAGGATGCTGCCTGTaGTCTCAGACACGCTGTCCATGCCACCCGCCAAAA +
Preference number: 6 (lower is better)
Translates to: QLSNQVCSGCCL*SQTRCPCHPPK
Trigger: TTTTGGCGGGTGGCATGGACAGCGTGTCTGAGAGCACAGGCAGCATCCTGAGCAAACTTGATTGGAAAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 72 bp TGGCAAGAGTCCGACAGGCTCCAGGCCTCTTTTGGTTaGGCCTGGGGCCTGAAAGAAACTTGTGGAATTCTT +
Preference number: 6 (lower is better)
Translates to: WQESDRLQASFG*AWGLKETCGIL
Trigger: AAGAATTCCACAAGTTTCTTTCAGGCCCCAGGCCCAACCAAAAGAGGCCTGGAGCCTGTCGGACTCTTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CAA 72 bp TTGGCAAGAGTCCGACAGGCTCCAGGCCTCTTTTGGTaGGGCCTGGGGCCTGAAAGAAACTTGTGGAATTCT +
Preference number: 6 (lower is better)
Translates to: LARVRQAPGLFW*GLGPERNLWNS
Trigger: AGAATTCCACAAGTTTCTTTCAGGCCCCAGGCCCAACCAAAAGAGGCCTGGAGCCTGTCGGACTCTTGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CAA 72 bp TTACAGGTAAACTCTGTCCATGTGCATTCTCTCTCTTaGGAGAGGAGCCCCGCTGCCGTCTGTAAGGTCCGG +
Preference number: 6 (lower is better)
Translates to: LQVNSVHVHSLS*ERSPAAVCKVR
Trigger: CCGGACCTTACAGACGGCAGCGGGGCTCCTCTCCAAAGAGAGAGAATGCACATGGACAGAGTTTACCTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CAA 72 bp GAGACGATCCTCGGGGCTGCCCCTTACAGAGATGGCTaGATCTGGAGATATGTCTGTCTCCTCCAGGTCTAT +
Preference number: 6 (lower is better)
Translates to: ETILGAAPYRDG*IWRYVCLLQVY
Trigger: ATAGACCTGGAGGAGACAGACATATCTCCAGATCAAGCCATCTCTGTAAGGGGCAGCCCCGAGGATCGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CAA 90 bp TGCTGGGCTGTTCTTGCCAGGCTCCCTGGTGCACTCTCCCATGGATaGTGCTCTGGCACTAACTCTCTGTCTGCTGTTGACTTCAATACA +
Preference number: 6 (lower is better)
Translates to: CWAVLARLPGALSHG*CSGTNSLSAVDFNT
Trigger: TGTATTGAAGTCAACAGCAGACAGAGAGTTAGTGCCAGAGCACAATCCATGGGAGAGTGCACCAGGGAGCCTGGCAAGAACAGCCCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 72 bp CTACTTTCATCAGCGGCTGCCGGGACAGCCTCAGGCTaGAGACTGCATGTGCCATTTAAATGGACAGTCACA +
Preference number: 6 (lower is better)
Translates to: LLSSAAAGTASG*RLHVPFKWTVT
Trigger: TGTGACTGTCCATTTAAATGGCACATGCAGTCTTCAGCCTGAGGCTGTCCCGGCAGCCGCTGATGAAAGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 72 bp TCTGAAGGAGATGGTAACGTGGTATGCACTGTTCTCTaGGACACAGGAGGTTGGCAAGAGTCCGACAGGCTC +
Preference number: 6 (lower is better)
Translates to: SEGDGNVVCTVL*DTGGWQESDRL
Trigger: GAGCCTGTCGGACTCTTGCCAACCTCCTGTGTCTCAGAGAACAGTGCATACCACGTTACCATCTCCTTCAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 72 bp AGACGATCCTCGGGGCTGCCCCTTACAGAGATGGCTTaGTCTGGAGATATGTCTGTCTCCTCCAGGTCTATT +
Preference number: 6 (lower is better)
Translates to: RRSSGLPLTEMA*SGDMSVSSRSI
Trigger: AATAGACCTGGAGGAGACAGACATATCTCCAGATCAAGCCATCTCTGTAAGGGGCAGCCCCGAGGATCGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 72 bp CCCTTGACTTTACTGAAGCACACCTGGGAATCAGACTaGACAGAGGGCATTCCTGTTGTGCCCAGTGAACAC +
Preference number: 6 (lower is better)
Translates to: PLTLLKHTWESD*TEGIPVVPSEH
Trigger: GTGTTCACTGGGCACAACAGGAATGCCCTCTGTGCAGTCTGATTCCCAGGTGTGCTTCAGTAAAGTCAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 72 bp GCAGGGAAGTCTTGCTCTATATTTTCTGCCATGGTCTaGACTGCTACCAGCTGCTCATCCATCTCCTGGAGC +
Preference number: 6 (lower is better)
Translates to: AGKSCSIFSAMV*TATSCSSISWS
Trigger: GCTCCAGGAGATGGATGAGCAGCTGGTAGCAGTGCAGACCATGGCAGAAAATATAGAGCAAGACTTCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 72 bp CCTGACTGGTTACCTAGTGCTGAAGCTGAAAGGGCCTaGCTTTCGAAATGTCGGGCACCCACACTGTTTAGA +
Preference number: 6 (lower is better)
Translates to: PDWLPSAEAERA*LSKCRAPTLFR
Trigger: TCTAAACAGTGTGGGTGCCCGACATTTCGAAAGCCAGGCCCTTTCAGCTTCAGCACTAGGTAACCAGTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CAA 72 bp GGCCATCTCTTGAGAAGGCAGAGATCAGAGCTCCCCTaGACTTTACTGAAGCACACCTGGGAATCAGACTGC +
Preference number: 6 (lower is better)
Translates to: GHLLRRQRSELP*TLLKHTWESDC
Trigger: GCAGTCTGATTCCCAGGTGTGCTTCAGTAAAGTCAAGGGGAGCTCTGATCTCTGCCTTCTCAAGAGATGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CAA 90 bp GAAGCTAACATTTGGTTTTCTTCTCGGCTTCTGAGCTCTTCCTTCTaGCAGCTCCCTCTTGGCACGCCTGCTTTGCCTCTGCTTCCCTTG +
Preference number: 6 (lower is better)
Translates to: EANIWFSSRLLSSSF*QLPLGTPALPLLPL
Trigger: CAAGGGAAGCAGAGGCAAAGCAGGCGTGCCAAGAGGGAGCTGCAAGAAGGAAGAGCTCAGAAGCCGAGAAGAAAACCAAATGTTAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CAA 90 bp CTCGTAACTGAGACGATCCTCGGGGCTGCCCCTTACAGAGATGGCTaGATCTGGAGATATGTCTGTCTCCTCCAGGTCTATTTACAGGTA +
Preference number: 6 (lower is better)
Translates to: LVTETILGAAPYRDG*IWRYVCLLQVYLQV
Trigger: TACCTGTAAATAGACCTGGAGGAGACAGACATATCTCCAGATCAAGCCATCTCTGTAAGGGGCAGCCCCGAGGATCGTCTCAGTTACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 72 bp TTAAGCCAAACAATCCTGCCCTTCTTTCCCAGTTCATaGCATCAGACTGCAGAGGGTTCTCCGACGTGCTCC +
Preference number: 6 (lower is better)
Translates to: LSQTILPFFPSS*HQTAEGSPTCS
Trigger: GGAGCACGTCGGAGAACCCTCTGCAGTCTGATGTCATGAACTGGGAAAGAAGGGCAGGATTGTTTGGCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 72 bp CCAGTCTGTCCTCTCACCTCAGGCTGGCCATCTAATTaGCACAAAGGAACACTCCCATGCGGAATATCCTGT +
Preference number: 6 (lower is better)
Translates to: PVCPLTSGWPSN*HKGTLPCGISC
Trigger: ACAGGATATTCCGCATGGGAGTGTTCCTTTGTGTCAATTAGATGGCCAGCCTGAGGTGAGAGGACAGACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 72 bp CAATGTAACTCTGCCGAAGACGGAGCGTGTGGAGGGTaGCTTTGCTGCTTGGTAACTTCATCTGAAGGCTCT +
Preference number: 6 (lower is better)
Translates to: QCNSAEDGACGG*LCCLVTSSEGS
Trigger: AGAGCCTTCAGATGAAGTTACCAAGCAGCAAAGTCACCCTCCACACGCTCCGTCTTCGGCAGAGTTACATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 72 bp GACAGCTTCTTTATCTTTCGTGGAAGGCAACGAAACTaGTTCTTCGGGCACAATCTGGGACCACTGACCCAC +
Preference number: 6 (lower is better)
Translates to: DSFFIFRGRQRN*FFGHNLGPLTH
Trigger: GTGGGTCAGTGGTCCCAGATTGTGCCCGAAGAAGCAGTTTCGTTGCCTTCCACGAAAGATAAAGAAGCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 72 bp GAAGTCTTGCTCTATATTTTCTGCCATGGTCTGCACTaGTACCAGCTGCTCATCCATCTCCTGGAGCTTGGC +
Preference number: 6 (lower is better)
Translates to: EVLLYIFCHGLH*YQLLIHLLELG
Trigger: GCCAAGCTCCAGGAGATGGATGAGCAGCTGGTAGCAGTGCAGACCATGGCAGAAAATATAGAGCAAGACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 72 bp TGCCGAGTCCGACAGCAGTTCATTCATCAGGCTGTATaGCTGAGAGAGTCGCTGACTATAGTGCTTAGACAG +
Preference number: 6 (lower is better)
Translates to: CRVRQQFIHQAV*LRESLTIVLRQ
Trigger: CTGTCTAAGCACTATAGTCAGCGACTCTCTCAGGCATACAGCCTGATGAATGAACTGCTGTCGGACTCGGCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 72 bp TGGCCACCATGTCTTCAACAGCTTTCCAATCAAGTTTaGTCAGGATGCTGCCTGTGCTCTCAGACACGCTGT +
Preference number: 6 (lower is better)
Translates to: WPPCLQQLSNQV*SGCCLCSQTRC
Trigger: ACAGCGTGTCTGAGAGCACAGGCAGCATCCTGAGCAAACTTGATTGGAAAGCTGTTGAAGACATGGTGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 72 bp AGATCAGAGCTCCCCTTGACTTTACTGAAGCACACCTaGGAATCAGACTGCACAGAGGGCATTCCTGTTGTG +
Preference number: 6 (lower is better)
Translates to: RSELPLTLLKHT*ESDCTEGIPVV
Trigger: CACAACAGGAATGCCCTCTGTGCAGTCTGATTCCCAGGTGTGCTTCAGTAAAGTCAAGGGGAGCTCTGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 72 bp AGATTGTCACCATGTTCTTCACTAAGAACAGCTGGCTaGGGGCAATACAGCGGAGGCGCTGGAAGATACAAG +
Preference number: 6 (lower is better)
Translates to: RLSPCSSLRTAG*GQYSGGAGRYK
Trigger: CTTGTATCTTCCAGCGCCTCCGCTGTATTGCCCCCAGCCAGCTGTTCTTAGTGAAGAACATGGTGACAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 72 bp CTTCCGGGTTTAATGGACTCGGGTACCCAAAAGGAATaGTTTGATGATCTCTGCACTGTGGGCTTCTCTCGC +
Preference number: 6 (lower is better)
Translates to: LPGLMDSGTQKE*FDDLCTVGFSR
Trigger: GCGAGAGAAGCCCACAGTGCAGAGATCATCAAACCATTCCTTTTGGGTACCCGAGTCCATTAAACCCGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 72 bp ACCCGTGTCTTTCACGTCATGGTTTTCTGCTTCAGCTaGCATTCTATTCCAGCACTCAGTCCCTTCCTGAGC +
Preference number: 6 (lower is better)
Translates to: TRVFHVMVFCFS*HSIPALSPFLS
Trigger: GCTCAGGAAGGGACTGAGTGCTGGAATAGAATGCCAGCTGAAGCAGAAAACCATGACGTGAAAGACACGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 72 bp ATCCTCGGGGCTGCCCCTTACAGAGATGGCTTGATCTaGAGATATGTCTGTCTCCTCCAGGTCTATTTACAG +
Preference number: 6 (lower is better)
Translates to: ILGAAPYRDGLI*RYVCLLQVYLQ
Trigger: CTGTAAATAGACCTGGAGGAGACAGACATATCTCCAGATCAAGCCATCTCTGTAAGGGGCAGCCCCGAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 72 bp AGGCCCAGTGCACAGACAGGTTCTTATCCTCCACGCTaGCCACCATGTCTTCAACAGCTTTCCAATCAAGTT +
Preference number: 6 (lower is better)
Translates to: RPSAQTGSYPPR*PPCLQQLSNQV
Trigger: AACTTGATTGGAAAGCTGTTGAAGACATGGTGGCCAGCGTGGAGGATAAGAACCTGTCTGTGCACTGGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CAA 72 bp GGTCCGAAATCTGTGCACCTTTCTGTTCTGTCAAGTTaGTATCCACGCTGGCGTCTCGTGGTTCTTTCCTGG +
Preference number: 6 (lower is better)
Translates to: GPKSVHLSVLSS*YPRWRLVVLSW
Trigger: CCAGGAAAGAACCACGAGACGCCAGCGTGGATACAAACTTGACAGAACAGAAAGGTGCACAGATTTCGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 72 bp CACGAATTACTGGACTGTATTTACAGGATGACGGAGTaGCCCCAGGATCACAGAGAAGTCTCCGATCTGACC +
Preference number: 6 (lower is better)
Translates to: HELLDCIYRMTE*PQDHREVSDLT
Trigger: GGTCAGATCGGAGACTTCTCTGTGATCCTGGGGTCACTCCGTCATCCTGTAAATACAGTCCAGTAATTCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 72 bp GGTCTTCACACGAATTACTGGACTGTATTTACAGGATaGCGGAGTGACCCCAGGATCACAGAGAAGTCTCCG +
Preference number: 6 (lower is better)
Translates to: GLHTNYWTVFTG*RSDPRITEKSP
Trigger: CGGAGACTTCTCTGTGATCCTGGGGTCACTCCGTCATCCTGTAAATACAGTCCAGTAATTCGTGTGAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 72 bp GAACACCGAGATGCCCGGAAAAGCAGGAGAACTCGCTaGAGGATTCCAGACAGCTTTTGGCGATTATCTTTT +
Preference number: 6 (lower is better)
Translates to: EHRDARKSRRTR*RIPDSFWRLSF
Trigger: AAAAGATAATCGCCAAAAGCTGTCTGGAATCCTGCAGCGAGTTCTCCTGCTTTTCCGGGCATCTCGGTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 72 bp GACTCGGGTACCCAAAAGGAATGGTTTGATGATCTCTaGACTGTGGGCTTCTCTCGCTTGTCATCTGGAACT +
Preference number: 6 (lower is better)
Translates to: DSGTQKEWFDDL*TVGFSRLSSGT
Trigger: AGTTCCAGATGACAAGCGAGAGAAGCCCACAGTGCAGAGATCATCAAACCATTCCTTTTGGGTACCCGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 72 bp TTGAACTGGAAGTTTTGTTCTAGTATATCTCTGTCCTaGTGTCTGTCAGACGGCGGCGCCACTGAGGGAATC +
Preference number: 6 (lower is better)
Translates to: LNWKFCSSISLS*CLSDGGATEGI
Trigger: GATTCCCTCAGTGGCGCCGCCGTCTGACAGACAGCAGGACAGAGATATACTAGAACAAAACTTCCAGTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 72 bp ACAGCCTCTGCTTTTCTCATGGCTTCCGCATTACAGTaGCTCGAATCTGAAGGAGATGGTAACGTGGTATGC +
Preference number: 6 (lower is better)
Translates to: TASAFLMASALQ*LESEGDGNVVC
Trigger: GCATACCACGTTACCATCTCCTTCAGATTCGAGCCACTGTAATGCGGAAGCCATGAGAAAAGCAGAGGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 72 bp GAGATGCAGGGAAGTCTTGCTCTATATTTTCTGCCATaGTCTGCACTGCTACCAGCTGCTCATCCATCTCCT +
Preference number: 6 (lower is better)
Translates to: EMQGSLALYFLP*SALLPAAHPSP
Trigger: AGGAGATGGATGAGCAGCTGGTAGCAGTGCAGACCATGGCAGAAAATATAGAGCAAGACTTCCCTGCATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CAA 72 bp GAGACCCTTTCACTCGAATCTTCTGCATCACCTTCCTaGCCCATCTCAGCTGTAAGATGTACCACTGCGCTA +
Preference number: 6 (lower is better)
Translates to: ETLSLESSASPS*PISAVRCTTAL
Trigger: TAGCGCAGTGGTACATCTTACAGCTGAGATGGGCAAGGAAGGTGATGCAGAAGATTCGAGTGAAAGGGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CAA 90 bp GAGAAGGAAGAGACCCTTTCACTCGAATCTTCTGCATCACCTTCCTaGCCCATCTCAGCTGTAAGATGTACCACTGCGCTACAGGAAAAG +
Preference number: 6 (lower is better)
Translates to: EKEETLSLESSASPS*PISAVRCTTALQEK
Trigger: CTTTTCCTGTAGCGCAGTGGTACATCTTACAGCTGAGATGGGCAAGGAAGGTGATGCAGAAGATTCGAGTGAAAGGGTCTCTTCCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 72 bp CCTTCCTTATCTGGGTCTGTGTTTGTACTCGCATCATaGCTTCCCACTGCTTTCTTTCGTACAGAGGCCATG +
Preference number: 6 (lower is better)
Translates to: PSLSGSVFVLAS*LPTAFFRTEAM
Trigger: CATGGCCTCTGTACGAAAGAAAGCAGTGGGAAGTCATGATGCGAGTACAAACACAGACCCAGATAAGGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 72 bp CCCAGTCCAGCCTTTTCCCAGTGTAGATTCAGCACTTaGGATGCAGGGAAGTCTTGCTCTATATTTTCTGCC +
Preference number: 6 (lower is better)
Translates to: PSPAFSQCRFST*DAGKSCSIFSA
Trigger: GGCAGAAAATATAGAGCAAGACTTCCCTGCATCTCAAGTGCTGAATCTACACTGGGAAAAGGCTGGACTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 72 bp CCAAGAGAAGGAAGAGACCCTTTCACTCGAATCTTCTaGATCACCTTCCTTGCCCATCTCAGCTGTAAGATG +
Preference number: 6 (lower is better)
Translates to: PREGRDPFTRIF*ITFLAHLSCKM
Trigger: CATCTTACAGCTGAGATGGGCAAGGAAGGTGATGCAGAAGATTCGAGTGAAAGGGTCTCTTCCTTCTCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 72 bp AATCTCATCACCCGTGTCTTTCACGTCATGGTTTTCTaGTTCAGCTGGCATTCTATTCCAGCACTCAGTCCC +
Preference number: 6 (lower is better)
Translates to: NLITRVFHVMVF*FSWHSIPALSP
Trigger: GGGACTGAGTGCTGGAATAGAATGCCAGCTGAAGCAGAAAACCATGACGTGAAAGACACGGGTGATGAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 72 bp TGGGTCTGTGTTTGTACTCGCATCATGACTTCCCACTaGTTTCTTTCGTACAGAGGCCATGAAATGCAGTCC +
Preference number: 6 (lower is better)
Translates to: WVCVCTRIMTSH*FLSYRGHEMQS
Trigger: GGACTGCATTTCATGGCCTCTGTACGAAAGAAAGCAGTGGGAAGTCATGATGCGAGTACAAACACAGACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 72 bp CACTTGAGATGCAGGGAAGTCTTGCTCTATATTTTCTaGCATGGTCTGCACTGCTACCAGCTGCTCATCCAT +
Preference number: 6 (lower is better)
Translates to: HLRCREVLLYIF*HGLHCYQLLIH
Trigger: ATGGATGAGCAGCTGGTAGCAGTGCAGACCATGGCAGAAAATATAGAGCAAGACTTCCCTGCATCTCAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 72 bp CAACCTAGGGCTTTGATGGAAACTTCATCAAGCGTGTaGTCTCCAGTCGCTCCAGGTCTAAAGAATGCTATC +
Preference number: 6 (lower is better)
Translates to: QPRALMETSSSV*SPVAPGLKNAI
Trigger: GATAGCATTCTTTAGACCTGGAGCGACTGGAGACCACACGCTTGATGAAGTTTCCATCAAAGCCCTAGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 72 bp TCTGGGATCAAAAGCTGTGGAACTTTCAAAGGTTCATaGCCTGAGCTTGCAGCCGTGGCTTGTGGGTTTTTA +
Preference number: 6 (lower is better)
Translates to: SGIKSCGTFKGS*PELAAVACGFL
Trigger: TAAAAACCCACAAGCCACGGCTGCAAGCTCAGGCCATGAACCTTTGAAAGTTCCACAGCTTTTGATCCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 72 bp GACTTTGAAAAGTATGAGGAGGAGCGGCATCGACAATaGAAGCTGCCATACAATGTAACTCTGCCGAAGACG +
Preference number: 6 (lower is better)
Translates to: DFEKYEEERHRQ*KLPYNVTLPKT
Trigger: CGTCTTCGGCAGAGTTACATTGTATGGCAGCTTCCATTGTCGATGCCGCTCCTCCTCATACTTTTCAAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CAA 90 bp AACAGGCTAGACCTCAAGGAATCCAGAGATCGAAAATTCAGCCCTTaGTCCTTGGGCTCAGACAGCATCATACTCTGGTATGCTTTCTCA +
Preference number: 6 (lower is better)
Translates to: NRLDLKESRDRKFSP*SLGSDSIILWYAFS
Trigger: TGAGAAAGCATACCAGAGTATGATGCTGTCTGAGCCCAAGGACAAAGGGCTGAATTTTCGATCTCTGGATTCCTTGAGGTCTAGCCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 72 bp CACTCTTCACCACTGATAGGTGTAAGTTCTAAGGCTTaGTTCAAGCTATCCCCAGCCATCTGCAGGTTAGTC +
Preference number: 6 (lower is better)
Translates to: HSSPLIGVSSKA*FKLSPAICRLV
Trigger: GACTAACCTGCAGATGGCTGGGGATAGCTTGAATCAAGCCTTAGAACTTACACCTATCAGTGGTGAAGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 72 bp CAGCAAAGCAGGAACCAGCTCTGTACACATTCTCACTaGTGGTCTTGCTCTGGCGTCGTTTTAATGTTGTGT +
Preference number: 6 (lower is better)
Translates to: QQSRNQLCTHSH*WSCSGVVLMLC
Trigger: ACACAACATTAAAACGACGCCAGAGCAAGACCATCAGTGAGAATGTGTACAGAGCTGGTTCCTGCTTTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 72 bp CCATGCGGAATATCCTGTGTATCTCCACTACTATCTTaGTCAGGACGGCTAATTCTTTTGTGGTCTGCTGGG +
Preference number: 6 (lower is better)
Translates to: PCGISCVSPLLS*SGRLILLWSAG
Trigger: CCCAGCAGACCACAAAAGAATTAGCCGTCCTGATCAAGATAGTAGTGGAGATACACAGGATATTCCGCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 72 bp CTTGTGGAATTCTTCCTACAGGTAAGGAAAGGGGCTTaGAGTCACGCTTGGGCTGAAAATGAAGCAGAGGAA +
Preference number: 6 (lower is better)
Translates to: LVEFFLQVRKGA*SHAWAENEAEE
Trigger: TTCCTCTGCTTCATTTTCAGCCCAAGCGTGACTTCAAGCCCCTTTCCTTACCTGTAGGAAGAATTCCACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 72 bp TTCTTCCTTCTGTGCCAGGTACTGAGGGAAATCGACTaGATGCTCTTGGTGGTGCTGAGAATACATAAGGAG +
Preference number: 6 (lower is better)
Translates to: FFLLCQVLREID*MLLVVLRIHKE
Trigger: CTCCTTATGTATTCTCAGCACCACCAAGAGCATTCAGTCGATTTCCCTCAGTACCTGGCACAGAAGGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 72 bp GCTTGCAGCCGTGGCTTGTGGGTTTTTACTACTTTCTaGATCAGCTTTTTGGGAAGGACCTTCCTTATCTGG +
Preference number: 6 (lower is better)
Translates to: ACSRGLWVFTTF*ISFLGRTFLIW
Trigger: CCAGATAAGGAAGGTCCTTCCCAAAAAGCTGATTCAGAAAGTAGTAAAAACCCACAAGCCACGGCTGCAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 72 bp GATCAAAAGCTGTGGAACTTTCAAAGGTTCATGGCCTaGGCTTGCAGCCGTGGCTTGTGGGTTTTTACTACT +
Preference number: 6 (lower is better)
Translates to: DQKLWNFQRFMA*ACSRGLWVFTT
Trigger: AGTAGTAAAAACCCACAAGCCACGGCTGCAAGCTCAGGCCATGAACCTTTGAAAGTTCCACAGCTTTTGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 72 bp CAAAAACAGCAGCCACGACAGCTTCTTTATCTTTCGTaGAAGGCAACGAAACTGCTTCTTCGGGCACAATCT +
Preference number: 6 (lower is better)
Translates to: QKQQPRQLLYLS*KATKLLLRAQS
Trigger: AGATTGTGCCCGAAGAAGCAGTTTCGTTGCCTTCCACGAAAGATAAAGAAGCTGTCGTGGCTGCTGTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CAA 72 bp GACCTCAAGGAATCCAGAGATCGAAAATTCAGCCCTTaGTCCTTGGGCTCAGACAGCATCATACTCTGGTAT +
Preference number: 6 (lower is better)
Translates to: DLKESRDRKFSP*SLGSDSIILWY
Trigger: ATACCAGAGTATGATGCTGTCTGAGCCCAAGGACAAAGGGCTGAATTTTCGATCTCTGGATTCCTTGAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 72 bp CAAGCCTCTGGGTTGAATCAAGAAGCAAGGACCTCATaGGCATTGTTGGAGACTGGTTATCAAGAAACCGAA +
Preference number: 6 (lower is better)
Translates to: QASGLNQEARTS*ALLETGYQETE
Trigger: TTCGGTTTCTTGATAACCAGTCTCCAACAATGCTCATGAGGTCCTTGCTTCTTGATTCAACCCAGAGGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 72 bp GTCGCTGAGTCAGTAAGAGCTTTACAGTATTTGCGGTaGGCCTTATCAAGTGGCCCATGTTTTGTCTGTATC +
Preference number: 6 (lower is better)
Translates to: VAESVRALQYLR*ALSSGPCFVCI
Trigger: GATACAGACAAAACATGGGCCACTTGATAAGGCTCACCGCAAATACTGTAAAGCTCTTACTGACTCAGCGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 72 bp AAAAGCCTCTCTGAGAATGACCCATGTTCTTGTCGCTaGGTCAGTAAGAGCTTTACAGTATTTGCGGTGAGC +
Preference number: 6 (lower is better)
Translates to: KSLSENDPCSCR*VSKSFTVFAVS
Trigger: GCTCACCGCAAATACTGTAAAGCTCTTACTGACTCAGCGACAAGAACATGGGTCATTCTCAGAGAGGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 72 bp TTTCCAGTCACTGCGATCTCACAATCTGAACAATCTTaGCTTTCTCTTACAGGTAACTGGGACCGGCTGAGT +
Preference number: 6 (lower is better)
Translates to: FPVTAISQSEQS*LSLTGNWDRLS
Trigger: ACTCAGCCGGTCCCAGTTACCTGTAAGAGAAAGTCAAGATTGTTCAGATTGTGAGATCGCAGTGACTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 72 bp GTTTCCTCTGCATCCTTTTGCTCTTCCACGTCCTCTTaGGTCTGCAAAGACACTTCTTCAGAAATGCTGATG +
Preference number: 6 (lower is better)
Translates to: VSSASFCSSTSS*VCKDTSSEMLM
Trigger: CATCAGCATTTCTGAAGAAGTGTCTTTGCAGACTCAAGAGGACGTGGAAGAGCAAAAGGATGCAGAGGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 72 bp TCTGCATCAGCCATAACTGATGCTTTCAGCACTTCTTaGACAGACCCAAACAGCAGACTAGCATCTTCTTCT +
Preference number: 6 (lower is better)
Translates to: SASAITDAFSTS*TDPNSRLASSS
Trigger: AGAAGAAGATGCTAGTCTGCTGTTTGGGTCTGTGCAAGAAGTGCTGAAAGCATCAGTTATGGCTGATGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 72 bp GACAGCATCATACTCTGGTATGCTTTCTCAAGCCTCTaGGTTGAATCAAGAAGCAAGGACCTCATGAGCATT +
Preference number: 6 (lower is better)
Translates to: DSIILWYAFSSL*VESRSKDLMSI
Trigger: AATGCTCATGAGGTCCTTGCTTCTTGATTCAACCCAGAGGCTTGAGAAAGCATACCAGAGTATGATGCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 72 bp GTACCCAAAAGGAATGGTTTGATGATCTCTGCACTGTaGGCTTCTCTCGCTTGTCATCTGGAACTCTATACA +
Preference number: 6 (lower is better)
Translates to: VPKRNGLMISAL*ASLACHLELYT
Trigger: TGTATAGAGTTCCAGATGACAAGCGAGAGAAGCCCACAGTGCAGAGATCATCAAACCATTCCTTTTGGGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CAA 72 bp CAGGAACCAGCTCTGTACACATTCTCACTGATGGTCTaGCTCTGGCGTCGTTTTAATGTTGTGTGTACATCA +
Preference number: 6 (lower is better)
Translates to: QEPALYTFSLMV*LWRRFNVVCTS
Trigger: TGATGTACACACAACATTAAAACGACGCCAGAGCAAGACCATCAGTGAGAATGTGTACAGAGCTGGTTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CAA 90 bp CTTTTTCTTGGACCGCGCAAAATTGCAATCATGTTTACAGAACACTaGGTAGGCCACACCAATGGAAACAGATGTCTTCCAGTCTCCAAG +
Preference number: 6 (lower is better)
Translates to: LFLGPRKIAIMFTEH*VGHTNGNRCLPVSK
Trigger: CTTGGAGACTGGAAGACATCTGTTTCCATTGGTGTGGCCTACCAAGTGTTCTGTAAACATGATTGCAATTTTGCGCGGTCCAAGAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CAA 90 bp CAAAGCAGGGACTGTCCCACAGAGTCCAATTTTGTACTCTGTTCCTaGAACTGGAAGTTTTGTTCTAGTATATCTCTGTCCTGCTGTCTG +
Preference number: 6 (lower is better)
Translates to: QSRDCPTESNFVLCS*NWKFCSSISLSCCL
Trigger: CAGACAGCAGGACAGAGATATACTAGAACAAAACTTCCAGTTCAAGGAACAGAGTACAAAATTGGACTCTGTGGGACAGTCCCTGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 72 bp TTCTGCCTGCAAAAATCTGGGGACAGTGCAATGTACTaGACTTTCCTTTCCTTGATGCTTCAACAGGCTAGA +
Preference number: 6 (lower is better)
Translates to: FCLQKSGDSAMY*TFLSLMLQQAR
Trigger: TCTAGCCTGTTGAAGCATCAAGGAAAGGAAAGTTCAGTACATTGCACTGTCCCCAGATTTTTGCAGGCAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 72 bp ATGTCAGCAATATCCGTCAAGCCAGTCACCTGGAGCTaGTCTTCTGAACCACTTTCAAGTAATTCATTGCTG +
Preference number: 6 (lower is better)
Translates to: MSAISVKPVTWS*SSEPLSSNSLL
Trigger: CAGCAATGAATTACTTGAAAGTGGTTCAGAAGATCAGCTCCAGGTGACTGGCTTGACGGATATTGCTGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 72 bp GGAGCTGATCTTCTGAACCACTTTCAAGTAATTCATTaGTGTCATTCAAACCAGGAGAAGGGATGTTCCAGC +
Preference number: 6 (lower is better)
Translates to: GADLLNHFQVIH*CHSNQEKGCSS
Trigger: GCTGGAACATCCCTTCTCCTGGTTTGAATGACAGCAATGAATTACTTGAAAGTGGTTCAGAAGATCAGCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 72 bp TCAAGAAGCAAGGACCTCATGAGCATTGTTGGAGACTaGTTATCAAGAAACCGAAGGGTTGTGACCATGTAT +
Preference number: 6 (lower is better)
Translates to: SRSKDLMSIVGD*LSRNRRVVTMY
Trigger: ATACATGGTCACAACCCTTCGGTTTCTTGATAACCAGTCTCCAACAATGCTCATGAGGTCCTTGCTTCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CAA 72 bp AGTTTCCTCTGCATCCTTTTGCTCTTCCACGTCCTCTaGAGTCTGCAAAGACACTTCTTCAGAAATGCTGAT +
Preference number: 6 (lower is better)
Translates to: SFLCILLLFHVL*SLQRHFFRNAD
Trigger: ATCAGCATTTCTGAAGAAGTGTCTTTGCAGACTCAAGAGGACGTGGAAGAGCAAAAGGATGCAGAGGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 72 bp GAAATTCCTATAGTCCAAGCTGCAAGTAGTGTTTTCTaGATACGGTGTAGTTCTGCAGTGTTTCTGTCTGTC +
Preference number: 6 (lower is better)
Translates to: EIPIVQAASSVF*IRCSSAVFLSV
Trigger: GACAGACAGAAACACTGCAGAACTACACCGTATCCAGAAAACACTACTTGCAGCTTGGACTATAGGAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 72 bp CCAGCTCTGTACACATTCTCACTGATGGTCTTGCTCTaGCGTCGTTTTAATGTTGTGTGTACATCAAAAAGT +
Preference number: 6 (lower is better)
Translates to: PALYTFSLMVLL*RRFNVVCTSKS
Trigger: ACTTTTTGATGTACACACAACATTAAAACGACGCCAGAGCAAGACCATCAGTGAGAATGTGTACAGAGCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CAA 90 bp ACAGCAAAGCAGGAACCAGCTCTGTACACATTCTCACTGATGGTCTaGCTCTGGCGTCGTTTTAATGTTGTGTGTACATCAAAAAGTAAA +
Preference number: 6 (lower is better)
Translates to: TAKQEPALYTFSLMV*LWRRFNVVCTSKSK
Trigger: TTTACTTTTTGATGTACACACAACATTAAAACGACGCCAGAGCAAGACCATCAGTGAGAATGTGTACAGAGCTGGTTCCTGCTTTGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 72 bp ATTTTCTCTTGCTTTCTGATACTGCCTGCAAGTGTATaGCAATTTATCCCGGACATGCAACATCCAGCACAA +
Preference number: 6 (lower is better)
Translates to: IFSCFLILPASV*QFIPDMQHPAQ
Trigger: TTGTGCTGGATGTTGCATGTCCGGGATAAATTGTCATACACTTGCAGGCAGTATCAGAAAGCAAGAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 72 bp TCATTGTTTCTTCTGCCTGCAAAAATCTGGGGACAGTaGAATGTACTGAACTTTCCTTTCCTTGATGCTTCA +
Preference number: 6 (lower is better)
Translates to: SLFLLPAKIWGQ*NVLNFPFLDAS
Trigger: TGAAGCATCAAGGAAAGGAAAGTTCAGTACATTGCACTGTCCCCAGATTTTTGCAGGCAGAAGAAACAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS GCA 72 bp CTTCCCACTGCTTTCTTTCGTACAGAGGCCATGAAATaGAGTCCTGCTGAAGTATTAATATCATCTTCTAAC +
Preference number: 6 (lower is better)
Translates to: LPTAFFRTEAMK*SPAEVLISSSN
Trigger: GTTAGAAGATGATATTAATACTTCAGCAGGACTGCATTTCATGGCCTCTGTACGAAAGAAAGCAGTGGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CAA 72 bp ATGGATTGTGCTCTGGCACTAACTCTCTGTCTGCTGTaGACTTCAATACAATCACTCTTTGTGGAGTTTGAT +
Preference number: 6 (lower is better)
Translates to: MDCALALTLCLL*TSIQSLFVEFD
Trigger: ATCAAACTCCACAAAGAGTGATTGTATTGAAGTCAACAGCAGACAGAGAGTTAGTGCCAGAGCACAATCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CAA 72 bp GACTGTCCCACAGAGTCCAATTTTGTACTCTGTTCCTaGAACTGGAAGTTTTGTTCTAGTATATCTCTGTCC +
Preference number: 6 (lower is better)
Translates to: DCPTESNFVLCS*NWKFCSSISLS
Trigger: GGACAGAGATATACTAGAACAAAACTTCCAGTTCAAGGAACAGAGTACAAAATTGGACTCTGTGGGACAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 72 bp AGGGTATATTCAACTGTCCACACATTTGAGAGATTCTaGTCTCTAATAACACTGGCCACCTTAGAGTGTTGT +
Preference number: 6 (lower is better)
Translates to: RVYSTVHTFERF*SLITLATLECC
Trigger: ACAACACTCTAAGGTGGCCAGTGTTATTAGAGATCAGAATCTCTCAAATGTGTGGACAGTTGAATATACCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 72 bp ATTTGCATCAGGCTCAGAAAATTGATCTGCTGCAGCTaGACTAATTTAAACATCTCATCTTGGAGCATCTGC +
Preference number: 6 (lower is better)
Translates to: ICIRLRKLICCS*TNLNISSWSIC
Trigger: GCAGATGCTCCAAGATGAGATGTTTAAATTAGTTCAGCTGCAGCAGATCAATTTTCTGAGCCTGATGCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS TCA 72 bp ACTGTCCCACAGAGTCCAATTTTGTACTCTGTTCCTTaGACTGGAAGTTTTGTTCTAGTATATCTCTGTCCT +
Preference number: 6 (lower is better)
Translates to: TVPQSPILYSVP*TGSFVLVYLCP
Trigger: AGGACAGAGATATACTAGAACAAAACTTCCAGTTCAAGGAACAGAGTACAAAATTGGACTCTGTGGGACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CAA 72 bp TGGGCTTTTTACCAACCAATGCTAATTCCATATGACTaGGGGTATGCCTTTGATACAAGTGTATCCAAGTTT +
Preference number: 6 (lower is better)
Translates to: WAFYQPMLIPYD*GYAFDTSVSKF
Trigger: AAACTTGGATACACTTGTATCAAAGGCATACCCCAAGTCATATGGAATTAGCATTGGTTGGTAAAAAGCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CAA 72 bp GGTATCATATTTAATGGTAAGTCCATACCCTTTTTCTaGGACCGCGCAAAATTGCAATCATGTTTACAGAAC +
Preference number: 6 (lower is better)
Translates to: GIIFNGKSIPFF*DRAKLQSCLQN
Trigger: GTTCTGTAAACATGATTGCAATTTTGCGCGGTCCAAGAAAAAGGGTATGGACTTACCATTAAATATGATACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2
CDS CCA 72 bp GTATCATATTTAATGGTAAGTCCATACCCTTTTTCTTaGACCGCGCAAAATTGCAATCATGTTTACAGAACA +
Preference number: 6 (lower is better)
Translates to: VSYLMVSPYPFS*TAQNCNHVYRT
Trigger: TGTTCTGTAAACATGATTGCAATTTTGCGCGGTCCAAGAAAAAGGGTATGGACTTACCATTAAATATGATAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110617.2