Pregenerated sensors for CNGA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005864Ensembl transcript IDs: ENSMUST00000006020.8
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACCAACACTCAAACCCACCTTCCCACTCCCCTCACAGACCTTGCATaGCTTGGGAGGCAGGGTAGGGGGCCCAGTGTCTGCAGCCAATTC | + |
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Preference number: 1 (lower is better) Translates to: TNTQTHLPTPLTDLA*LGRQGRGPSVCSQF Trigger: GAATTGGCTGCAGACACTGGGCCCCCTACCCTGCCTCCCAAGGCATGCAAGGTCTGTGAGGGGAGTGGGAAGGTGGGTTTGAGTGTTGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| 3UTR GCA 90 bp | ACAGACCTTGCATGCCTTGGGAGGCAGGGTAGGGGGCCCAGTGTCTaGAGCCAATTCTTAAATGTGTACAAGTGCATGGAAACAGGCTGT | + |
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Preference number: 1 (lower is better) Translates to: TDLACLGRQGRGPSV*SQFLNVYKCMETGC Trigger: ACAGCCTGTTTCCATGCACTTGTACACATTTAAGAATTGGCTGCAGACACTGGGCCCCCTACCCTGCCTCCCAAGGCATGCAAGGTCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| 3UTR GCA 90 bp | GTATCTCATGCAGCAGTAGCCTTCACAAACTCTTCAGAACTTGTGTaGATAAGGTGTGATGGCCAAAGCTGCCAGCCACCTCCTTCTCAG | + |
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Preference number: 1 (lower is better) Translates to: VSHAAVAFTNSSELV*IRCDGQSCQPPPSQ Trigger: CTGAGAAGGAGGTGGCTGGCAGCTTTGGCCATCACACCTTATGCACACAAGTTCTGAAGAGTTTGTGAAGGCTACTGCTGCATGAGATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| 3UTR GCA 90 bp | GGTAGGGGGCCCAGTGTCTGCAGCCAATTCTTAAATGTGTACAAGTaGATGGAAACAGGCTGTTCAGAGAACACATTAAAAAGGTATTTG | + |
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Preference number: 1 (lower is better) Translates to: GRGPSVCSQFLNVYK*METGCSENTLKRYL Trigger: CAAATACCTTTTTAATGTGTTCTCTGAACAGCCTGTTTCCATGCACTTGTACACATTTAAGAATTGGCTGCAGACACTGGGCCCCCTACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCCCACTCCCCTCACAGACCTTGCATGCCTTGGGAGGCAGGGTAGGGGGCCCGAAATTCAACCCACATaGTCTCCATTATCCACAAGC | + |
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Preference number: 2 (lower is better) Translates to: LPTPLTDLACLGRQGRGPEIQPT*SPLSTS Trigger: GCTTGTGGATAATGGAGATCATGTGGGTTGAATTTC...GGGCCCCCTACCCTGCCTCCCAAGGCATGCAAGGTCTGTGAGGGGAGTGGGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| 3UTR-3UTR CCA 90 bp | GAAGCTAAAAGGAGTCAGGCAGGCATTGTGGTGCACAGTGTTCTTCAGAGAACAGCTGTTAGCTGGACTTaGAAGGGGACTCCAAGATGT | + |
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Preference number: 2 (lower is better) Translates to: EAKRSQAGIVVHSVLQRTAVSWT*KGTPRC Trigger: ACATCTTGGAGTCCCCTTCCAAGTCCAGCTAACAGC...TGTTCTCTGAAGAACACTGTGCACCACAATGCCTGCCTGACTCCTTTTAGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| 3UTR CAA 90 bp | AGGGGACTCCAAGATGTAGCCAAAACCTTAAGCCTCAGCAAGGCTTaGGGAGTTCGGAGGGACATGAGCATAATGTGTGTAAATGTAAAG | + |
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Preference number: 2 (lower is better) Translates to: RGLQDVAKTLSLSKA*GVRRDMSIMCVNVK Trigger: CTTTACATTTACACACATTATGCTCATGTCCCTCCGAACTCCCAAAGCCTTGCTGAGGCTTAAGGTTTTGGCTACATCTTGGAGTCCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| 3UTR GCA 72 bp | CAAACCCACCTTCCCACTCCCCTCACAGACCTTGCATaGCTTGGGAGGCAGGGTAGGGGGCCCAGTGTCTGC | + |
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Preference number: 3 (lower is better) Translates to: QTHLPTPLTDLA*LGRQGRGPSVC Trigger: GCAGACACTGGGCCCCCTACCCTGCCTCCCAAGGCATGCAAGGTCTGTGAGGGGAGTGGGAAGGTGGGTTTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| 3UTR GCA 72 bp | GCATGCCTTGGGAGGCAGGGTAGGGGGCCCAGTGTCTaGAGCCAATTCTTAAATGTGTACAAGTGCATGGAA | + |
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Preference number: 3 (lower is better) Translates to: ACLGRQGRGPSV*SQFLNVYKCME Trigger: TTCCATGCACTTGTACACATTTAAGAATTGGCTGCAGACACTGGGCCCCCTACCCTGCCTCCCAAGGCATGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| 3UTR TCA 72 bp | AGCTGCCAGCCACCTCCTTCTCAGAGTGACATTGTCTaGCAAGGAAGTATGACCCTGAGCACCAACACTCAA | + |
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Preference number: 3 (lower is better) Translates to: SCQPPPSQSDIV*QGSMTLSTNTQ Trigger: TTGAGTGTTGGTGCTCAGGGTCATACTTCCTTGTCAGACAATGTCACTCTGAGAAGGAGGTGGCTGGCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| 3UTR GCA 72 bp | GCAGCAGTAGCCTTCACAAACTCTTCAGAACTTGTGTaGATAAGGTGTGATGGCCAAAGCTGCCAGCCACCT | + |
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Preference number: 3 (lower is better) Translates to: AAVAFTNSSELV*IRCDGQSCQPP Trigger: AGGTGGCTGGCAGCTTTGGCCATCACACCTTATGCACACAAGTTCTGAAGAGTTTGTGAAGGCTACTGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| 3UTR-3UTR CAA 90 bp | TGCAGCCAATTCTTAAATGTGTACAAGTGCATGGAAACAGGCTGTTCAGAGAACAGCCTCAGCAAGGCTTaGGGAGTTCGGAGGGACATG | + |
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Preference number: 3 (lower is better) Translates to: CSQFLNVYKCMETGCSENSLSKA*GVRRDM Trigger: CATGTCCCTCCGAACTCCCAAAGCCTTGCTGAGGCT...GTTCTCTGAACAGCCTGTTTCCATGCACTTGTACACATTTAAGAATTGGCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| 3UTR-3UTR CAA 90 bp | TGCAGCCAATTCTTAAATGTGTACAAGTGCATGGAAACAGGCTGTTCAGAGAACGGAGTCAGGCAGGCATaGTGGTGCACAGTGTTCTTC | + |
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Preference number: 3 (lower is better) Translates to: CSQFLNVYKCMETGCSENGVRQA*WCTVFF Trigger: GAAGAACACTGTGCACCACAATGCCTGCCTGACTCC...GTTCTCTGAACAGCCTGTTTCCATGCACTTGTACACATTTAAGAATTGGCTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| 3UTR CCA 72 bp | AAATTCAACCCACATGATCTCCATTATCCACAAGCTTaGCTGTTAGCTGGACTTGGAAGGGGACTCCAAGAT | + |
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Preference number: 3 (lower is better) Translates to: KFNPHDLHYPQA*LLAGLGRGLQD Trigger: ATCTTGGAGTCCCCTTCCAAGTCCAGCTAACAGCCAAGCTTGTGGATAATGGAGATCATGTGGGTTGAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| 3UTR-3UTR CAA 90 bp | CTGTCTAGTTATCTAGTCCCAGAAAAGCCTCAGGAAGGACAATTTAGCTATTCTCCATTATCCACAAGCTaGGCTGTTAGCTGGACTTGG | + |
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Preference number: 3 (lower is better) Translates to: LSSYLVPEKPQEGQFSYSPLSTS*AVSWTW Trigger: CCAAGTCCAGCTAACAGCCAAGCTTGTGGATAATGG...AGAATAGCTAAATTGTCCTTCCTGAGGCTTTTCTGGGACTAGATAACTAGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| 3UTR GCA 72 bp | CCCAGTGTCTGCAGCCAATTCTTAAATGTGTACAAGTaGATGGAAACAGGCTGTTCAGAGAACACATTAAAA | + |
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Preference number: 3 (lower is better) Translates to: PSVCSQFLNVYK*METGCSENTLK Trigger: TTTTAATGTGTTCTCTGAACAGCCTGTTTCCATGCACTTGTACACATTTAAGAATTGGCTGCAGACACTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR CCA 90 bp | CTCCCCTCACAGACCTTGCATGCCTTGGGAGGCAGGGTAGGGGGCCCAGTGTCTCTGCTACCTGCCCTGTaGTCATCTTTGCCATTGGCC | + |
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Preference number: 4 (lower is better) Translates to: LPSQTLHALGGRVGGPVSLLPAL*SSLPLA Trigger: GGCCAATGGCAAAGATGACCACAGGGCAGGTAGCAG...AGACACTGGGCCCCCTACCCTGCCTCCCAAGGCATGCAAGGTCTGTGAGGGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR CCA 90 bp | CTCCCCTCACAGACCTTGCATGCCTTGGGAGGCAGGGTAGGGGGCCCAGTGTCTCCAGACTACGGATATTaGCAGTGCGCCGATTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: LPSQTLHALGGRVGGPVSPDYGY*QCADCP Trigger: TGGGCAATCGGCGCACTGCCAATATCCGTAGTCTGG...AGACACTGGGCCCCCTACCCTGCCTCCCAAGGCATGCAAGGTCTGTGAGGGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR CCA 90 bp | CTTCCCACTCCCCTCACAGACCTTGCATGCCTTGGGAGGCAGGGTAGGGGGCCCTGTTTGAGCTTCTGCTaGGCTCCAGTGTACTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: LPTPLTDLACLGRQGRGPCLSFC*APVYSA Trigger: GGCTGAGTACACTGGAGCCCAGCAGAAGCTCAAACA...GGGCCCCCTACCCTGCCTCCCAAGGCATGCAAGGTCTGTGAGGGGAGTGGGAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR TCA 90 bp | CCCACTCCCCTCACAGACCTTGCATGCCTTGGGAGGCAGGGTAGGGGGCCCAGTCAAGCAGAAGAGATCTaGGTAGCCCAGACTACGGAT | + |
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Preference number: 4 (lower is better) Translates to: PTPLTDLACLGRQGRGPSQAEEI*VAQTTD Trigger: ATCCGTAGTCTGGGCTACTCAGATCTCTTCTGCTTG...ACTGGGCCCCCTACCCTGCCTCCCAAGGCATGCAAGGTCTGTGAGGGGAGTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR TCA 90 bp | ACTCCCCTCACAGACCTTGCATGCCTTGGGAGGCAGGGTAGGGGGCCCAGTGTCTTCTCTGTAGATCACTaGAGCAGGCTCTGGCTACCA | + |
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Preference number: 4 (lower is better) Translates to: TPLTDLACLGRQGRGPSVFSVDH*SRLWLP Trigger: TGGTAGCCAGAGCCTGCTTCAGTGATCTACAGAGAA...GACACTGGGCCCCCTACCCTGCCTCCCAAGGCATGCAAGGTCTGTGAGGGGAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR TCA 90 bp | CTTCCCACTCCCCTCACAGACCTTGCATGCCTTGGGAGGCAGGGTAGGGGGCCCATTTCTTGGGGTCTTTaGCCAGGAGCCCTTGTTCTA | + |
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Preference number: 4 (lower is better) Translates to: LPTPLTDLACLGRQGRGPISWGL*PGALVL Trigger: TAGAACAAGGGCTCCTGGTCAAAGACCCCAAGAAAT...GGGCCCCCTACCCTGCCTCCCAAGGCATGCAAGGTCTGTGAGGGGAGTGGGAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR GCA 90 bp | CTTCCCACTCCCCTCACAGACCTTGCATGCCTTGGGAGGCAGGGTAGGGGGCCCCACAATCCTGGAATATaGGCACTTTCTTCAGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: LPTPLTDLACLGRQGRGPHNPGI*ALSSEW Trigger: CCACTCTGAAGAAAGTGCGCATATTCCAGGATTGTG...GGGCCCCCTACCCTGCCTCCCAAGGCATGCAAGGTCTGTGAGGGGAGTGGGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR CCA 90 bp | CCCACTCCCCTCACAGACCTTGCATGCCTTGGGAGGCAGGGTAGGGGGCCCAGTGTTATGGTTATTAGCTaGAGAGCTCTTCACACCGTT | + |
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Preference number: 4 (lower is better) Translates to: PTPLTDLACLGRQGRGPSVMVIS*RALHTV Trigger: AACGGTGTGAAGAGCTCTCCAGCTAATAACCATAAC...ACTGGGCCCCCTACCCTGCCTCCCAAGGCATGCAAGGTCTGTGAGGGGAGTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR CCA 90 bp | CTCCCCTCACAGACCTTGCATGCCTTGGGAGGCAGGGTAGGGGGCCCAGTGTCTCTTCCAGGACTTTCTTaGCATCAGGATACTCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: LPSQTLHALGGRVGGPVSLPGLS*HQDTQS Trigger: TGACTGAGTATCCTGATGCCAAGAAAGTCCTGGAAG...AGACACTGGGCCCCCTACCCTGCCTCCCAAGGCATGCAAGGTCTGTGAGGGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR TCA 90 bp | ACTCCCCTCACAGACCTTGCATGCCTTGGGAGGCAGGGTAGGGGGCCCAGTGTCTCAGGAAGTCAAAGATaGCAAATAGGTACTCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: TPLTDLACLGRQGRGPSVSGSQR*QIGTPH Trigger: ATGAGGAGTACCTATTTGTCATCTTTGACTTCCTGA...GACACTGGGCCCCCTACCCTGCCTCCCAAGGCATGCAAGGTCTGTGAGGGGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR GCA 90 bp | GCTGGACTTGGAAGGGGACTCCAAGATGTAGCCAAAACCTTAAGCCTCAGCAAGCCACAGACTGTGGTCTaGTACCTGCCCTGTGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: AGLGRGLQDVAKTLSLSKPQTVV*YLPCGH Trigger: ATGACCACAGGGCAGGTAGCAGACCACAGTCTGTGG...CTTGCTGAGGCTTAAGGTTTTGGCTACATCTTGGAGTCCCCTTCCAAGTCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR CCA 90 bp | CTATACAGCACTTCTAACTCCTGGGGTCAAAGCAAGGCTGGACAGGCACCTATGTGGGTTGTCACAGTCTaGAGCTCAGGCCCACGGAAA | + |
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Preference number: 4 (lower is better) Translates to: LYSTSNSWGQSKAGQAPMWVVTV*SSGPRK Trigger: TTTCCGTGGGCCTGAGCTCCAGACTGTGACAACCCA...CATAGGTGCCTGTCCAGCCTTGCTTTGACCCCAGGAGTTAGAAGTGCTGTATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR TCA 90 bp | AAGCCTCAGCAAGGCTTTGGGAGTTCGGAGGGACATGAGCATAATGTGTGTAAACCTTTGCCATCCCCCTaGTGGGTTGTCACAGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: KPQQGFGSSEGHEHNVCKPLPSP*WVVTVW Trigger: CCAGACTGTGACAACCCATCAGGGGGATGGCAAAGG...TTTACACACATTATGCTCATGTCCCTCCGAACTCCCAAAGCCTTGCTGAGGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR TCA 90 bp | CTCCAAGATGTAGCCAAAACCTTAAGCCTCAGCAAGGCTTTGGGAGTTCGGAGGAGAGGACCAGGTTGCTaGTTCGGAAGATGTTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: LQDVAKTLSLSKALGVRRRGPGC*FGRCWG Trigger: ACCCCAACATCTTCCGAATCAGCAACCTGGTCCTCT...CCTCCGAACTCCCAAAGCCTTGCTGAGGCTTAAGGTTTTGGCTACATCTTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR TCA 90 bp | CTATACAGCACTTCTAACTCCTGGGGTCAAAGCAAGGCTGGACAGGCACCTATGAAAGCAGCTCCCAGCTaGCAGCAAGGCATACTGAGT | + |
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Preference number: 4 (lower is better) Translates to: LYSTSNSWGQSKAGQAPMKAAPS*QQGILS Trigger: ACTCAGTATGCCTTGCTGTCAGCTGGGAGCTGCTTT...CATAGGTGCCTGTCCAGCCTTGCTTTGACCCCAGGAGTTAGAAGTGCTGTATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR TCA 90 bp | CTCCAAGATGTAGCCAAAACCTTAAGCCTCAGCAAGGCTTTGGGAGTTCGGAGGGACAGCAAGGCATACTaGGTCACACCATCATCAGCT | + |
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Preference number: 4 (lower is better) Translates to: LQDVAKTLSLSKALGVRRDSKAY*VTPSSA Trigger: AGCTGATGATGGTGTGACTCAGTATGCCTTGCTGTC...CCTCCGAACTCCCAAAGCCTTGCTGAGGCTTAAGGTTTTGGCTACATCTTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR GCA 90 bp | GGACTTGGAAGGGGACTCCAAGATGTAGCCAAAACCTTAAGCCTCAGCAAGGCTATCTCTGCCAACCTTTaGAGTTCTGAGGAAGTGTCA | + |
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Preference number: 4 (lower is better) Translates to: GLGRGLQDVAKTLSLSKAISANL*SSEEVS Trigger: TGACACTTCCTCAGAACTGCAAAGGTTGGCAGAGAT...AGCCTTGCTGAGGCTTAAGGTTTTGGCTACATCTTGGAGTCCCCTTCCAAGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR CCA 90 bp | GGGACTCCAAGATGTAGCCAAAACCTTAAGCCTCAGCAAGGCTTTGGGAGTTCGGTTCAAATTTCTTTTTaGTGCCCTTTCCCTCGCCGT | + |
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Preference number: 4 (lower is better) Translates to: GTPRCSQNLKPQQGFGSSVQISF*CPFPRR Trigger: ACGGCGAGGGAAAGGGCACCAAAAAGAAATTTGAAC...CGAACTCCCAAAGCCTTGCTGAGGCTTAAGGTTTTGGCTACATCTTGGAGTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR TCA 90 bp | CTTGGAAGGGGACTCCAAGATGTAGCCAAAACCTTAAGCCTCAGCAAGGCTTTGACTGCATGTAGTGTTTaGCAGCATCAATCTTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: LGRGLQDVAKTLSLSKALTACSV*QHQSWP Trigger: AGGCCAAGATTGATGCTGTCAAACACTACATGCAGT...CAAAGCCTTGCTGAGGCTTAAGGTTTTGGCTACATCTTGGAGTCCCCTTCCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR GCA 90 bp | CTTGGAAGGGGACTCCAAGATGTAGCCAAAACCTTAAGCCTCAGCAAGGCTTTGATCATCAGCTACCACTaGCAATTTGCCCTCCTTGAT | + |
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Preference number: 4 (lower is better) Translates to: LGRGLQDVAKTLSLSKALIISYH*QFALLD Trigger: ATCAAGGAGGGCAAATTGGCAGTGGTAGCTGATGAT...CAAAGCCTTGCTGAGGCTTAAGGTTTTGGCTACATCTTGGAGTCCCCTTCCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR TCA 90 bp | CTATACAGCACTTCTAACTCCTGGGGTCAAAGCAAGGCTGGACAGGCACCTATGATAGAAGGAGGAGGATaGTGGTTATGGTTATTAGCT | + |
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Preference number: 4 (lower is better) Translates to: LYSTSNSWGQSKAGQAPMIEGGG*WLWLLA Trigger: AGCTAATAACCATAACCATCATCCTCCTCCTTCTAT...CATAGGTGCCTGTCCAGCCTTGCTTTGACCCCAGGAGTTAGAAGTGCTGTATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR GCA 90 bp | ATGTGTGTAAATGTAAAGTTCTATACAGCACTTCTAACTCCTGGGGTCAAAGCACGTCCTTGTCGCCTTTaGCATCCCCCTGATGGGTTG | + |
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Preference number: 4 (lower is better) Translates to: MCVNVKFYTALLTPGVKARPCRL*HPPDGL Trigger: CAACCCATCAGGGGGATGGCAAAGGCGACAAGGACG...TGCTTTGACCCCAGGAGTTAGAAGTGCTGTATAGAACTTTACATTTACACACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR GCA 90 bp | CTTGGAAGGGGACTCCAAGATGTAGCCAAAACCTTAAGCCTCAGCAAGGCTTTGTTGTACGTGTCTCAGTaGGGTCAAAGAACTCAAACA | + |
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Preference number: 4 (lower is better) Translates to: LGRGLQDVAKTLSLSKALLYVSQ*GQRTQT Trigger: TGTTTGAGTTCTTTGACCGCACTGAGACACGTACAA...CAAAGCCTTGCTGAGGCTTAAGGTTTTGGCTACATCTTGGAGTCCCCTTCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR CCA 90 bp | ATGTGTGTAAATGTAAAGTTCTATACAGCACTTCTAACTCCTGGGGTCAAAGCAAGCTGCCACAGACTGTaGTCTGCTACCTGCCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: MCVNVKFYTALLTPGVKASCHRL*SATCPV Trigger: CACAGGGCAGGTAGCAGACCACAGTCTGTGGCAGCT...TGCTTTGACCCCAGGAGTTAGAAGTGCTGTATAGAACTTTACATTTACACACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR CCA 90 bp | TGCAGCCAATTCTTAAATGTGTACAAGTGCATGGAAACAGGCTGTTCAGAGAACGCATCAATCTTGGCCTaGAACTCTGCTCGTGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: CSQFLNVYKCMETGCSENASILA*NSARVA Trigger: TGCCACACGAGCAGAGTTCCAGGCCAAGATTGATGC...GTTCTCTGAACAGCCTGTTTCCATGCACTTGTACACATTTAAGAATTGGCTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| 3UTR CAA 72 bp | CAAGATGTAGCCAAAACCTTAAGCCTCAGCAAGGCTTaGGGAGTTCGGAGGGACATGAGCATAATGTGTGTA | + |
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Preference number: 4 (lower is better) Translates to: QDVAKTLSLSKA*GVRRDMSIMCV Trigger: TACACACATTATGCTCATGTCCCTCCGAACTCCCAAAGCCTTGCTGAGGCTTAAGGTTTTGGCTACATCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| 3UTR CAA 72 bp | CTCGATATAAAGAAGCTAAAAGGAGTCAGGCAGGCATaGTGGTGCACAGTGTTCTTCAGAGAACACTGTCTA | + |
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Preference number: 4 (lower is better) Translates to: LDIKKLKGVRQA*WCTVFFREHCL Trigger: TAGACAGTGTTCTCTGAAGAACACTGTGCACCACAATGCCTGCCTGACTCCTTTTAGCTTCTTTATATCGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR TCA 90 bp | GAAGCTAAAAGGAGTCAGGCAGGCATTGTGGTGCACAGTGTTCTTCAGAGAACATTCAGAGTGGACAAATaGACATTAATGGCTATCTCT | + |
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Preference number: 4 (lower is better) Translates to: EAKRSQAGIVVHSVLQRTFRVDK*TLMAIS Trigger: AGAGATAGCCATTAATGTTCATTTGTCCACTCTGAA...TGTTCTCTGAAGAACACTGTGCACCACAATGCCTGCCTGACTCCTTTTAGCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR GCA 90 bp | ATGTGTGTAAATGTAAAGTTCTATACAGCACTTCTAACTCCTGGGGTCAAAGCAAGTGTCATCATCAGCTaGCACAGACTGTGGTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: MCVNVKFYTALLTPGVKASVIIS*HRLWSA Trigger: AGCAGACCACAGTCTGTGGCAGCTGATGATGACACT...TGCTTTGACCCCAGGAGTTAGAAGTGCTGTATAGAACTTTACATTTACACACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR GCA 90 bp | ATGTGTGTAAATGTAAAGTTCTATACAGCACTTCTAACTCCTGGGGTCAAAGCATACCTCCATACTAGCTaGCACTTCATTCTCATCCAG | + |
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Preference number: 4 (lower is better) Translates to: MCVNVKFYTALLTPGVKAYLHTS*HFILIQ Trigger: CTGGATGAGAATGAAGTGGCAGCTAGTATGGAGGTA...TGCTTTGACCCCAGGAGTTAGAAGTGCTGTATAGAACTTTACATTTACACACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR CCA 90 bp | AAATGTGTACAAGTGCATGGAAACAGGCTGTTCAGAGAACACATTAAAAAGGTAATACCAGTCTCCAGCTaGGTCCAAAACAAACAGTTC | + |
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Preference number: 4 (lower is better) Translates to: KCVQVHGNRLFREHIKKVIPVSS*VQNKQF Trigger: GAACTGTTTGTTTTGGACCCAGCTGGAGACTGGTAT...TACCTTTTTAATGTGTTCTCTGAACAGCCTGTTTCCATGCACTTGTACACATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR CCA 90 bp | TTAAATGTGTACAAGTGCATGGAAACAGGCTGTTCAGAGAACACATTAAAAAGGCCAGCTTCACAATCCTaGAATATGCGCACTTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: LNVYKCMETGCSENTLKRPASQS*NMRTFF Trigger: GAAGAAAGTGCGCATATTCCAGGATTGTGAAGCTGG...CCTTTTTAATGTGTTCTCTGAACAGCCTGTTTCCATGCACTTGTACACATTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR TCA 90 bp | TTAAATGTGTACAAGTGCATGGAAACAGGCTGTTCAGAGAACACATTAAAAAGGAATATAAACAGTGTCTaGGAAGTAATCCAGCACCAG | + |
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Preference number: 4 (lower is better) Translates to: LNVYKCMETGCSENTLKRNINSV*EVIQHQ Trigger: CTGGTGCTGGATTACTTCTCAGACACTGTTTATATT...CCTTTTTAATGTGTTCTCTGAACAGCCTGTTTCCATGCACTTGTACACATTTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS TCA 90 bp | TTGGTGCCCTTTCCCTCGCCGTCCTTGTCGCCTTTGCCATCCCCCTaGTGGGTTGTCACAGTCTGGAGCTCAGGCCCACGGAAACGCTCT | + |
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Preference number: 5 (lower is better) Translates to: LVPFPSPSLSPLPSP*WVVTVWSSGPRKRS Trigger: AGAGCGTTTCCGTGGGCCTGAGCTCCAGACTGTGACAACCCATCAGGGGGATGGCAAAGGCGACAAGGACGGCGAGGGAAAGGGCACCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR CAA 90 bp | CCCACTCCCCTCACAGACCTTGCATGCCTTGGGAGGCAGGGTAGGGGGCCCAGTTTGTCTCGCAATTTCTaGGGGTCTTTGACCAGGAGC | + |
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Preference number: 5 (lower is better) Translates to: PTPLTDLACLGRQGRGPSLSRNF*GSLTRS Trigger: GCTCCTGGTCAAAGACCCCAAGAAATTGCGAGACAA...ACTGGGCCCCCTACCCTGCCTCCCAAGGCATGCAAGGTCTGTGAGGGGAGTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR CAA 90 bp | ACTCCCCTCACAGACCTTGCATGCCTTGGGAGGCAGGGTAGGGGGCCCAGTGTCGCTACCACTGCCAATTaGCCCTCCTTGATGATGTAC | + |
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Preference number: 5 (lower is better) Translates to: TPLTDLACLGRQGRGPSVATTAN*PSLMMY Trigger: GTACATCATCAAGGAGGGCAAATTGGCAGTGGTAGC...GACACTGGGCCCCCTACCCTGCCTCCCAAGGCATGCAAGGTCTGTGAGGGGAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS GCA 90 bp | CAAATTTCTTTTTGGTGCCCTTTCCCTCGCCGTCCTTGTCGCCTTTaGCATCCCCCTGATGGGTTGTCACAGTCTGGAGCTCAGGCCCAC | + |
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Preference number: 5 (lower is better) Translates to: QISFWCPFPRRPCRL*HPPDGLSQSGAQAH Trigger: GTGGGCCTGAGCTCCAGACTGTGACAACCCATCAGGGGGATGGCAAAGGCGACAAGGACGGCGAGGGAAAGGGCACCAAAAAGAAATTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS GCA 90 bp | TGTTTCATCTTGGTCTCCAGCACTGTGATGCGCTGTTTGAGCTTCTaGTGGGCTCCAGTGTACTCAGCCAGCAGGCGGGCAAAACGAGTG | + |
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Preference number: 5 (lower is better) Translates to: CFILVSSTVMRCLSF*WAPVYSASRRAKRV Trigger: CACTCGTTTTGCCCGCCTGCTGGCTGAGTACACTGGAGCCCAGCAGAAGCTCAAACAGCGCATCACAGTGCTGGAGACCAAGATGAAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS CCA 90 bp | TTCATCTTGGTCTCCAGCACTGTGATGCGCTGTTTGAGCTTCTGCTaGGCTCCAGTGTACTCAGCCAGCAGGCGGGCAAAACGAGTGTAC | + |
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Preference number: 5 (lower is better) Translates to: FILVSSTVMRCLSFC*APVYSASRRAKRVY Trigger: GTACACTCGTTTTGCCCGCCTGCTGGCTGAGTACACTGGAGCCCAGCAGAAGCTCAAACAGCGCATCACAGTGCTGGAGACCAAGATGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS GCA 90 bp | AAGCCACCCCTTCCCCTGCGTGGAGTATCCATCTCTGCCAACCTTTaGAGTTCTGAGGAAGTGTCATCATCAGCTGCCACAGACTGTGGT | + |
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Preference number: 5 (lower is better) Translates to: KPPLPLRGVSISANL*SSEEVSSSAATDCG Trigger: ACCACAGTCTGTGGCAGCTGATGATGACACTTCCTCAGAACTGCAAAGGTTGGCAGAGATGGATACTCCACGCAGGGGAAGGGGTGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR CAA 90 bp | AGCTGGACTTGGAAGGGGACTCCAAGATGTAGCCAAAACCTTAAGCCTCAGCAACATCCCCCTGATGGGTaGTCACAGTCTGGAGCTCAG | + |
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Preference number: 5 (lower is better) Translates to: SWTWKGTPRCSQNLKPQQHPPDG*SQSGAQ Trigger: CTGAGCTCCAGACTGTGACAACCCATCAGGGGGATG...TTGCTGAGGCTTAAGGTTTTGGCTACATCTTGGAGTCCCCTTCCAAGTCCAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR CAA 90 bp | GGGCCCAGTGTCTGCAGCCAATTCTTAAATGTGTACAAGTGCATGGAAACAGGCACTGTGATGCGCTGTTaGAGCTTCTGCTGGGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: GPSVCSQFLNVYKCMETGTVMRC*SFCWAP Trigger: TGGAGCCCAGCAGAAGCTCAAACAGCGCATCACAGT...GCCTGTTTCCATGCACTTGTACACATTTAAGAATTGGCTGCAGACACTGGGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS TCA 90 bp | AGTCACAGCTTCCATAAGATCATCCTTGGACAAGCAGAAGAGATCTaGGTAGCCCAGACTACGGATATTGGCAGTGCGCCGATTGCCCAT | + |
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Preference number: 5 (lower is better) Translates to: SHSFHKIILGQAEEI*VAQTTDIGSAPIAH Trigger: ATGGGCAATCGGCGCACTGCCAATATCCGTAGTCTGGGCTACTCAGATCTCTTCTGCTTGTCCAAGGATGATCTTATGGAAGCTGTGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR CAA 90 bp | GGGACTCCAAGATGTAGCCAAAACCTTAAGCCTCAGCAAGGCTTTGGGAGTTCGTCTTCCAGGACTTTCTaGGCATCAGGATACTCAGTC | + |
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Preference number: 5 (lower is better) Translates to: GTPRCSQNLKPQQGFGSSSSRTF*ASGYSV Trigger: GACTGAGTATCCTGATGCCAAGAAAGTCCTGGAAGA...CGAACTCCCAAAGCCTTGCTGAGGCTTAAGGTTTTGGCTACATCTTGGAGTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS TCA 90 bp | GCCCTGTGGTCATCTTTGCCATTGGCCTTGATAGAAGGAGGAGGATaGTGGTTATGGTTATTAGCTGGAGAGCTCTTCACACCGTTGGAT | + |
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Preference number: 5 (lower is better) Translates to: ALWSSLPLALIEGGG*WLWLLAGELFTPLD Trigger: ATCCAACGGTGTGAAGAGCTCTCCAGCTAATAACCATAACCATCATCCTCCTCCTTCTATCAAGGCCAATGGCAAAGATGACCACAGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS TCA 90 bp | GTGTACAAGGTCTCCATGTTTGTCTCCAGCTGCTCCAGCTTCTCCTaGACATCTACCTCCATACTAGCTGCCACTTCATTCTCATCCAGT | + |
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Preference number: 5 (lower is better) Translates to: VYKVSMFVSSCSSFS*TSTSILAATSFSSS Trigger: ACTGGATGAGAATGAAGTGGCAGCTAGTATGGAGGTAGATGTTCAGGAGAAGCTGGAGCAGCTGGAGACAAACATGGAGACCTTGTACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS TCA 90 bp | CTCTGGCTACCAACAGACACCAGTTGTAAAGAACAGGCATGGCAATaGCAAACAACCAACGGTAATACCAGTCTCCAGCTGGGTCCAAAA | + |
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Preference number: 5 (lower is better) Translates to: LWLPTDTSCKEQAWQ*QTTNGNTSLQLGPK Trigger: TTTTGGACCCAGCTGGAGACTGGTATTACCGTTGGTTGTTTGTCATTGCCATGCCTGTTCTTTACAACTGGTGTCTGTTGGTAGCCAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR CAA 90 bp | TTAAATGTGTACAAGTGCATGGAAACAGGCTGTTCAGAGAACACATTAAAAAGGTTTCCCTCGCCGTCCTaGTCGCCTTTGCCATCCCCC | + |
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Preference number: 5 (lower is better) Translates to: LNVYKCMETGCSENTLKRFPSPS*SPLPSP Trigger: GGGGGATGGCAAAGGCGACAAGGACGGCGAGGGAAA...CCTTTTTAATGTGTTCTCTGAACAGCCTGTTTCCATGCACTTGTACACATTTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR CAA 90 bp | AAGCCTCAGCAAGGCTTTGGGAGTTCGGAGGGACATGAGCATAATGTGTGTAAAAGTTCAAATTTCTTTTaGGTGCCCTTTCCCTCGCCG | + |
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Preference number: 5 (lower is better) Translates to: KPQQGFGSSEGHEHNVCKSSNFF*VPFPSP Trigger: CGGCGAGGGAAAGGGCACCAAAAAGAAATTTGAACT...TTTACACACATTATGCTCATGTCCCTCCGAACTCCCAAAGCCTTGCTGAGGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS TCA 90 bp | GCCTGTGCGCAGCCGAATGATGAGGTCTGCAATATAAACAGTGTCTaGGAAGTAATCCAGCACCAGCCATACCACAAAATAGTTTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: ACAQPNDEVCNINSV*EVIQHQPYHKIVSL Trigger: CAGAGAAACTATTTTGTGGTATGGCTGGTGCTGGATTACTTCTCAGACACTGTTTATATTGCAGACCTCATCATTCGGCTGCGCACAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS TCA 90 bp | GCTTCACAATCCTGGAATATGCGCACTTTCTTCAGAGTGGACAAATaGACATTAATGGCTATCTCTGCCCTAAGCTTTGCAGGCAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: ASQSWNMRTFFRVDK*TLMAISALSFAGRF Trigger: GAACCTGCCTGCAAAGCTTAGGGCAGAGATAGCCATTAATGTTCATTTGTCCACTCTGAAGAAAGTGCGCATATTCCAGGATTGTGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR CAA 90 bp | CACGCTCTTAGAAATTCAACCCACATGATCTCCATTATCCACAAGCTTGGCTGTTGGTTCTGTTTCATCTaGGTCTCCAGCACTGTGATG | + |
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Preference number: 5 (lower is better) Translates to: HALRNSTHMISIIHKLGCWFCFI*VSSTVM Trigger: CATCACAGTGCTGGAGACCAAGATGAAACAGAACCA...ACAGCCAAGCTTGTGGATAATGGAGATCATGTGGGTTGAATTTCTAAGAGCGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS CCA 90 bp | AGGCATGGCAATGACAAACAACCAACGGTAATACCAGTCTCCAGCTaGGTCCAAAACAAACAGTTCAAATTTCTTTTTGGTGCCCTTTCC | + |
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Preference number: 5 (lower is better) Translates to: RHGNDKQPTVIPVSS*VQNKQFKFLFGALS Trigger: GGAAAGGGCACCAAAAAGAAATTTGAACTGTTTGTTTTGGACCCAGCTGGAGACTGGTATTACCGTTGGTTGTTTGTCATTGCCATGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR CAA 90 bp | AAATGTGTACAAGTGCATGGAAACAGGCTGTTCAGAGAACACATTAAAAAGGTAGGAAGGAGTCAGGTCTaGGTTCCTCCTCACGGAAAT | + |
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Preference number: 5 (lower is better) Translates to: KCVQVHGNRLFREHIKKVGRSQV*VPPHGN Trigger: ATTTCCGTGAGGAGGAACCAAGACCTGACTCCTTCC...TACCTTTTTAATGTGTTCTCTGAACAGCCTGTTTCCATGCACTTGTACACATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR CAA 90 bp | TTAAATGTGTACAAGTGCATGGAAACAGGCTGTTCAGAGAACACATTAAAAAGGTGGTCATCTTTGCCATaGGCCTTGATAGAAGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: LNVYKCMETGCSENTLKRWSSLP*ALIEGG Trigger: TCCTCCTTCTATCAAGGCCAATGGCAAAGATGACCA...CCTTTTTAATGTGTTCTCTGAACAGCCTGTTTCCATGCACTTGTACACATTTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR CAA 90 bp | ATGTGTGTAAATGTAAAGTTCTATACAGCACTTCTAACTCCTGGGGTCAAAGCATCACGGAAATTTTTGTaGGCCCAGTCTCTGATGATC | + |
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Preference number: 5 (lower is better) Translates to: MCVNVKFYTALLTPGVKASRKFL*AQSLMI Trigger: GATCATCAGAGACTGGGCCAACAAAAATTTCCGTGA...TGCTTTGACCCCAGGAGTTAGAAGTGCTGTATAGAACTTTACATTTACACACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR CAA 90 bp | AAATGTGTACAAGTGCATGGAAACAGGCTGTTCAGAGAACACATTAAAAAGGTACGCCGATTGCCCATTTaGCTACCCTTAATGTTAAGG | + |
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Preference number: 5 (lower is better) Translates to: KCVQVHGNRLFREHIKKVRRLPI*LPLMLR Trigger: CCTTAACATTAAGGGTAGCAAAATGGGCAATCGGCG...TACCTTTTTAATGTGTTCTCTGAACAGCCTGTTTCCATGCACTTGTACACATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR CAA 90 bp | ATGTGTGTAAATGTAAAGTTCTATACAGCACTTCTAACTCCTGGGGTCAAAGCATCCATAAGATCATCCTaGGACAAGCAGAAGAGATCT | + |
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Preference number: 5 (lower is better) Translates to: MCVNVKFYTALLTPGVKASIRSS*DKQKRS Trigger: AGATCTCTTCTGCTTGTCCAAGGATGATCTTATGGA...TGCTTTGACCCCAGGAGTTAGAAGTGCTGTATAGAACTTTACATTTACACACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS-3UTR CAA 90 bp | AAATGTGTACAAGTGCATGGAAACAGGCTGTTCAGAGAACACATTAAAAAGGTAAACCATTTGATGACCTaGGCTTCCATGTCTTTACTG | + |
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Preference number: 5 (lower is better) Translates to: KCVQVHGNRLFREHIKKVNHLMT*ASMSLL Trigger: CAGTAAAGACATGGAAGCCAAGGTCATCAAATGGTT...TACCTTTTTAATGTGTTCTCTGAACAGCCTGTTTCCATGCACTTGTACACATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS TCA 72 bp | TTTCCCTCGCCGTCCTTGTCGCCTTTGCCATCCCCCTaGTGGGTTGTCACAGTCTGGAGCTCAGGCCCACGG | + |
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Preference number: 6 (lower is better) Translates to: FPSPSLSPLPSP*WVVTVWSSGPR Trigger: CCGTGGGCCTGAGCTCCAGACTGTGACAACCCATCAGGGGGATGGCAAAGGCGACAAGGACGGCGAGGGAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS CAA 72 bp | CGCCGTCCTTGTCGCCTTTGCCATCCCCCTGATGGGTaGTCACAGTCTGGAGCTCAGGCCCACGGAAACGCT | + |
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Preference number: 6 (lower is better) Translates to: RRPCRLCHPPDG*SQSGAQAHGNA Trigger: AGCGTTTCCGTGGGCCTGAGCTCCAGACTGTGACAACCCATCAGGGGGATGGCAAAGGCGACAAGGACGGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS CAA 90 bp | CCTTTCCCTCGCCGTCCTTGTCGCCTTTGCCATCCCCCTGATGGGTaGTCACAGTCTGGAGCTCAGGCCCACGGAAACGCTCTAGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: PFPRRPCRLCHPPDG*SQSGAQAHGNALGR Trigger: CCTTCCTAGAGCGTTTCCGTGGGCCTGAGCTCCAGACTGTGACAACCCATCAGGGGGATGGCAAAGGCGACAAGGACGGCGAGGGAAAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS GCA 72 bp | TTGGTCTCCAGCACTGTGATGCGCTGTTTGAGCTTCTaGTGGGCTCCAGTGTACTCAGCCAGCAGGCGGGCA | + |
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Preference number: 6 (lower is better) Translates to: LVSSTVMRCLSF*WAPVYSASRRA Trigger: TGCCCGCCTGCTGGCTGAGTACACTGGAGCCCAGCAGAAGCTCAAACAGCGCATCACAGTGCTGGAGACCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS GCA 72 bp | CCAGGCGGACAATCCTTCGGAAGCCACCCCTTCCCCTaGGTGGAGTATCCATCTCTGCCAACCTTTGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: PGGQSFGSHPFP*VEYPSLPTFAV Trigger: AACTGCAAAGGTTGGCAGAGATGGATACTCCACGCAGGGGAAGGGGTGGCTTCCGAAGGATTGTCCGCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS GCA 72 bp | TTTTGGTGCCCTTTCCCTCGCCGTCCTTGTCGCCTTTaGCATCCCCCTGATGGGTTGTCACAGTCTGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: FWCPFPRRPCRL*HPPDGLSQSGA Trigger: AGCTCCAGACTGTGACAACCCATCAGGGGGATGGCAAAGGCGACAAGGACGGCGAGGGAAAGGGCACCAAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS CAA 90 bp | TCATGGTTCTGTTTCATCTTGGTCTCCAGCACTGTGATGCGCTGTTaGAGCTTCTGCTGGGCTCCAGTGTACTCAGCCAGCAGGCGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SWFCFILVSSTVMRC*SFCWAPVYSASRRA Trigger: TGCCCGCCTGCTGGCTGAGTACACTGGAGCCCAGCAGAAGCTCAAACAGCGCATCACAGTGCTGGAGACCAAGATGAAACAGAACCATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS CAA 72 bp | GAGTCAGGTCTTGGTTCCTCCTCACGGAAATTTTTGTaGGCCCAGTCTCTGATGATCCCCACCAGGCGGACA | + |
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Preference number: 6 (lower is better) Translates to: ESGLGSSSRKFL*AQSLMIPTRRT Trigger: TGTCCGCCTGGTGGGGATCATCAGAGACTGGGCCAACAAAAATTTCCGTGAGGAGGAACCAAGACCTGACTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS CAA 72 bp | CAGGCCCACGGAAACGCTCTAGGAAGGAGTCAGGTCTaGGTTCCTCCTCACGGAAATTTTTGTTGGCCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: QAHGNALGRSQV*VPPHGNFCWPS Trigger: ACTGGGCCAACAAAAATTTCCGTGAGGAGGAACCAAGACCTGACTCCTTCCTAGAGCGTTTCCGTGGGCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS CAA 72 bp | TGTTTCATCTTGGTCTCCAGCACTGTGATGCGCTGTTaGAGCTTCTGCTGGGCTCCAGTGTACTCAGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: CFILVSSTVMRC*SFCWAPVYSAS Trigger: GCTGGCTGAGTACACTGGAGCCCAGCAGAAGCTCAAACAGCGCATCACAGTGCTGGAGACCAAGATGAAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS CAA 90 bp | TCTAGGAAGGAGTCAGGTCTTGGTTCCTCCTCACGGAAATTTTTGTaGGCCCAGTCTCTGATGATCCCCACCAGGCGGACAATCCTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: SRKESGLGSSSRKFL*AQSLMIPTRRTILR Trigger: CCGAAGGATTGTCCGCCTGGTGGGGATCATCAGAGACTGGGCCAACAAAAATTTCCGTGAGGAGGAACCAAGACCTGACTCCTTCCTAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS CAA 90 bp | CGCTCTAGGAAGGAGTCAGGTCTTGGTTCCTCCTCACGGAAATTTTaGTTGGCCCAGTCTCTGATGATCCCCACCAGGCGGACAATCCTT | + |
|
Preference number: 6 (lower is better) Translates to: RSRKESGLGSSSRKF*LAQSLMIPTRRTIL Trigger: AAGGATTGTCCGCCTGGTGGGGATCATCAGAGACTGGGCCAACAAAAATTTCCGTGAGGAGGAACCAAGACCTGACTCCTTCCTAGAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS GCA 72 bp | CTTCCCCTGCGTGGAGTATCCATCTCTGCCAACCTTTaGAGTTCTGAGGAAGTGTCATCATCAGCTGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: LPLRGVSISANL*SSEEVSSSAAT Trigger: TGTGGCAGCTGATGATGACACTTCCTCAGAACTGCAAAGGTTGGCAGAGATGGATACTCCACGCAGGGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS TCA 72 bp | TTCCATAAGATCATCCTTGGACAAGCAGAAGAGATCTaGGTAGCCCAGACTACGGATATTGGCAGTGCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: FHKIILGQAEEI*VAQTTDIGSAP Trigger: CGGCGCACTGCCAATATCCGTAGTCTGGGCTACTCAGATCTCTTCTGCTTGTCCAAGGATGATCTTATGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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| CDS TCA 72 bp | GTCTCCATGTTTGTCTCCAGCTGCTCCAGCTTCTCCTaGACATCTACCTCCATACTAGCTGCCACTTCATTC | + |
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Preference number: 6 (lower is better) Translates to: VSMFVSSCSSFS*TSTSILAATSF Trigger: GAATGAAGTGGCAGCTAGTATGGAGGTAGATGTTCAGGAGAAGCTGGAGCAGCTGGAGACAAACATGGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006020.8 |
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