Pregenerated sensors for CMPK2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020638Ensembl transcript IDs: ENSMUST00000020969.5
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACAATTGATCAGTGTGGGCCAAAACTGACATCCTTAGCTTCCAGCTaGAGAAAGTCCTCCAGCAGGCTCACCACTGGATCAGAAAGTCGG | + |
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Preference number: 1 (lower is better) Translates to: TIDQCGPKLTSLASS*RKSSSRLTTGSESR Trigger: CCGACTTTCTGATCCAGTGGTGAGCCTGCTGGAGGACTTTCTGCAGCTGGAAGCTAAGGATGTCAGTTTTGGCCCACACTGATCAATTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| 3UTR-3UTR TCA 90 bp | GACATCCTTAGCTTCCAGCTGCAGAAAGTCCTCCAGCAGGCTCACCACTGGATCATGGCCAGGCAGAAATaGATCAGCAGCCGCAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: DILSFQLQKVLQQAHHWIMARQK*ISSRSW Trigger: CCAGCTGCGGCTGCTGATTCATTTCTGCCTGGCCAT...GATCCAGTGGTGAGCCTGCTGGAGGACTTTCTGCAGCTGGAAGCTAAGGATGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| 3UTR-3UTR TCA 90 bp | CCTCCACAGCTCTATTCTCTATCTCAAGAGCCCTCGAAGCTGACTTCACATGCATGGCCTCCGTTTGTGTaGGTGACTCACACACAGCTC | + |
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Preference number: 2 (lower is better) Translates to: PPQLYSLSQEPSKLTSHAWPPFV*VTHTQL Trigger: GAGCTGTGTGTGAGTCACTCACACAAACGGAGGCCA...TGCATGTGAAGTCAGCTTCGAGGGCTCTTGAGATAGAGAATAGAGCTGTGGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| 3UTR-3UTR GCA 90 bp | CCTCCACAGCTCTATTCTCTATCTCAAGAGCCCTCGAAGCTGACTTCACATGCAGCACACATCTATCAGTaGCAAGGCACTCACTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: PPQLYSLSQEPSKLTSHAAHIYQ*QGTHSG Trigger: CCCTGAGTGAGTGCCTTGGCACTGATAGATGTGTGC...TGCATGTGAAGTCAGCTTCGAGGGCTCTTGAGATAGAGAATAGAGCTGTGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| 3UTR-3UTR CCA 90 bp | CCTCTGGTGCAATCATCTCAGAGAGGCTTGAACAAAACCCTTTGTGGAATTAGCCAGCAGGCTCACCACTaGATCAGAAAGTCGGGGTGT | + |
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Preference number: 2 (lower is better) Translates to: PLVQSSQRGLNKTLCGISQQAHH*IRKSGC Trigger: ACACCCCGACTTTCTGATCCAGTGGTGAGCCTGCTG...GCTAATTCCACAAAGGGTTTTGTTCAAGCCTCTCTGAGATGATTGCACCAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| 3UTR CAA 90 bp | ACCACTGGATCAGAAAGTCGGGGTGTTAAAATATATCCCAAGAAGTaGGTACATGGCCAGGCAGAAATGAATCAGCAGCCGCAGCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: TTGSESRGVKIYPKK*VHGQAEMNQQPQLA Trigger: AGCCAGCTGCGGCTGCTGATTCATTTCTGCCTGGCCATGTACCAACTTCTTGGGATATATTTTAACACCCCGACTTTCTGATCCAGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| 3UTR CAA 90 bp | CTACGACTTCCTATTCAGCCTCTGGTGCAATCATCTCAGAGAGGCTaGAACAAAACCCTTTGTGGAATTAGCTGCCACATTACAGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: LRLPIQPLVQSSQRG*NKTLCGISCHITES Trigger: GCTCTCTGTAATGTGGCAGCTAATTCCACAAAGGGTTTTGTTCAAGCCTCTCTGAGATGATTGCACCAGAGGCTGAATAGGAAGTCGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| 3UTR-3UTR TCA 90 bp | ACCCCAGATTCTGAACCCAAGGATAGAATATTCAATACCATGTTCTACTATGGACTCCGTTTGTGTGAGTaGCTCACACACAGCTCCTAC | + |
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Preference number: 2 (lower is better) Translates to: TPDSEPKDRIFNTMFYYGLRLCE*LTHSSY Trigger: GTAGGAGCTGTGTGTGAGTCACTCACACAAACGGAG...TCCATAGTAGAACATGGTATTGAATATTCTATCCTTGGGTTCAGAATCTGGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| 3UTR-3UTR CCA 90 bp | GATTCTGAACCCAAGGATAGAATATTCAATACCATGTTCTACTATGGAGTTTCAATCAGCAGCCGCAGCTaGCTCAGTCAGTCAGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: DSEPKDRIFNTMFYYGVSISSRS*LSQSEG Trigger: TCCTTCTGACTGACTGAGCCAGCTGCGGCTGCTGAT...TGAAACTCCATAGTAGAACATGGTATTGAATATTCTATCCTTGGGTTCAGAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| 3UTR-3UTR GCA 90 bp | GTGCAATCATCTCAGAGAGGCTTGAACAAAACCCTTTGTGGAATTAGCTGCCACTTTTTCCACCAAATATaGTCATACCCCCTAAATCTA | + |
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Preference number: 2 (lower is better) Translates to: VQSSQRGLNKTLCGISCHFFHQI*SYPLNL Trigger: TAGATTTAGGGGGTATGAGCATATTTGGTGGAAAAA...GTGGCAGCTAATTCCACAAAGGGTTTTGTTCAAGCCTCTCTGAGATGATTGCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| 3UTR-3UTR TCA 90 bp | ACCCCAGATTCTGAACCCAAGGATAGAATATTCAATACCATGTTCTACTATGGATGTTCTTTGATCCTCTaGATTAAGAGCAATGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: TPDSEPKDRIFNTMFYYGCSLIL*IKSNGF Trigger: GAAGCCATTGCTCTTAATTCAGAGGATCAAAGAACA...TCCATAGTAGAACATGGTATTGAATATTCTATCCTTGGGTTCAGAATCTGGGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| 3UTR-3UTR GCA 90 bp | GATTCTGAACCCAAGGATAGAATATTCAATACCATGTTCTACTATGGAGTTTCAGAAGCTGACTTCACATaGAATCAGAAGACATTCAAA | + |
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Preference number: 2 (lower is better) Translates to: DSEPKDRIFNTMFYYGVSEADFT*NQKTFK Trigger: TTTGAATGTCTTCTGATTGCATGTGAAGTCAGCTTC...TGAAACTCCATAGTAGAACATGGTATTGAATATTCTATCCTTGGGTTCAGAATC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| 3UTR GCA 72 bp | CAGTGTGGGCCAAAACTGACATCCTTAGCTTCCAGCTaGAGAAAGTCCTCCAGCAGGCTCACCACTGGATCA | + |
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Preference number: 3 (lower is better) Translates to: QCGPKLTSLASS*RKSSSRLTTGS Trigger: TGATCCAGTGGTGAGCCTGCTGGAGGACTTTCTGCAGCTGGAAGCTAAGGATGTCAGTTTTGGCCCACACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| 3UTR TCA 72 bp | CTCATACCCCCTAAATCTAAGAAGCTGCATGGCAAGTaGTGGGTTTCGGGGCATCACACAGCTTCTCCGGTG | + |
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Preference number: 3 (lower is better) Translates to: LIPPKSKKLHGK*WVSGHHTASPV Trigger: CACCGGAGAAGCTGTGTGATGCCCCGAAACCCATCACTTGCCATGCAGCTTCTTAGATTTAGGGGGTATGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| 3UTR TCA 72 bp | CAAACGCTGCATTTAGCTCCTTGGCCTCCGTTTGTGTaGGTGACTCACACACAGCTCCTACACCGAGGAAAC | + |
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Preference number: 3 (lower is better) Translates to: QTLHLAPWPPFV*VTHTQLLHRGN Trigger: GTTTCCTCGGTGTAGGAGCTGTGTGTGAGTCACTCACACAAACGGAGGCCAAGGAGCTAAATGCAGCGTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| 3UTR-3UTR CAA 90 bp | GGGCCAAAACTGACATCCTTAGCTTCCAGCTGCAGAAAGTCCTCCAGCAGGCTCATATATCCCAAGAAGTaGGTACATGGCCAGGCAGAA | + |
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Preference number: 3 (lower is better) Translates to: GPKLTSLASSCRKSSSRLIYPKK*VHGQAE Trigger: TTCTGCCTGGCCATGTACCAACTTCTTGGGATATAT...GAGCCTGCTGGAGGACTTTCTGCAGCTGGAAGCTAAGGATGTCAGTTTTGGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| 3UTR GCA 72 bp | ACGCATGATGTAAACATCAACAGAAACAAATTGGTGTaGAGCGCATCCCGATCAGCACAGCCTGCTCGTTAC | + |
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Preference number: 3 (lower is better) Translates to: THDVNINRNKLV*SASRSAQPARY Trigger: GTAACGAGCAGGCTGTGCTGATCGGGATGCGCTGCACACCAATTTGTTTCTGTTGATGTTTACATCATGCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| 3UTR TCA 72 bp | AAGGCACTCACTCAGGGCACTGTCCAAGGTGTTCTTTaGTCCTCTGAATTAAGAGCAATGGCTTCTTTCCAA | + |
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Preference number: 3 (lower is better) Translates to: KALTQGTVQGVL*SSELRAMASFQ Trigger: TTGGAAAGAAGCCATTGCTCTTAATTCAGAGGATCAAAGAACACCTTGGACAGTGCCCTGAGTGAGTGCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| 3UTR TCA 72 bp | GTGACTCACACACAGCTCCTACACCGAGGAAACGCATaGTGTAAACATCAACAGAAACAAATTGGTGTGCAG | + |
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Preference number: 3 (lower is better) Translates to: VTHTQLLHRGNA*CKHQQKQIGVQ Trigger: CTGCACACCAATTTGTTTCTGTTGATGTTTACATCATGCGTTTCCTCGGTGTAGGAGCTGTGTGTGAGTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| 3UTR-3UTR CAA 90 bp | CTATGGAGTTTCACCCCTAGTCCTCTTTGTAGTTTTTATCCTGAGACAAGGTCTATCAACAGAAACAAATaGGTGTGCAGCGCATCCCGA | + |
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Preference number: 3 (lower is better) Translates to: LWSFTPSPLCSFYPETRSINRNK*VCSASR Trigger: TCGGGATGCGCTGCACACCAATTTGTTTCTGTTGAT...AGACCTTGTCTCAGGATAAAAACTACAAAGAGGACTAGGGGTGAAACTCCATAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| 3UTR TCA 72 bp | CACAGCTCTATTCTCTATCTCAAGAGCCCTCGAAGCTaGCTTCACATGCAATCAGAAGACATTCAAAGTGCA | + |
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Preference number: 3 (lower is better) Translates to: HSSILYLKSPRS*LHMQSEDIQSA Trigger: TGCACTTTGAATGTCTTCTGATTGCATGTGAAGTCAGCTTCGAGGGCTCTTGAGATAGAGAATAGAGCTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| 3UTR TCA 72 bp | GAATGTCAGAGCAAGTTTATTCACTGTCAGGTTTCATaGAGAAAGCACTACGACTTCCTATTCAGCCTCTGG | + |
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Preference number: 3 (lower is better) Translates to: ECQSKFIHCQVS*RKHYDFLFSLW Trigger: CCAGAGGCTGAATAGGAAGTCGTAGTGCTTTCTTCATGAAACCTGACAGTGAATAAACTTGCTCTGACATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| 3UTR GCA 72 bp | CAGAGAGGCTTGAACAAAACCCTTTGTGGAATTAGCTaGCACATTACAGAGAGCCTTAATGTTATTTATCAG | + |
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Preference number: 3 (lower is better) Translates to: QRGLNKTLCGIS*HITESLNVIYQ Trigger: CTGATAAATAACATTAAGGCTCTCTGTAATGTGGCAGCTAATTCCACAAAGGGTTTTGTTCAAGCCTCTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| 3UTR GCA 72 bp | TTCTCTATCTCAAGAGCCCTCGAAGCTGACTTCACATaGAATCAGAAGACATTCAAAGTGCATGATAATTTA | + |
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Preference number: 3 (lower is better) Translates to: FSISRALEADFT*NQKTFKVHDNL Trigger: TAAATTATCATGCACTTTGAATGTCTTCTGATTGCATGTGAAGTCAGCTTCGAGGGCTCTTGAGATAGAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| 3UTR TCA 72 bp | AGATTCTTCTTAAGAAATGGGATGTGGGATCAAAAATaGTGTAGAGAGGCATCAACATTTGAACTGGAATGT | + |
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Preference number: 3 (lower is better) Translates to: RFFLRNGMWDQK*CREASTFELEC Trigger: ACATTCCAGTTCAAATGTTGATGCCTCTCTACATCATTTTTGATCCCACATCCCATTTCTTAAGAAGAATCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS-3UTR CCA 90 bp | GGGCCAAAACTGACATCCTTAGCTTCCAGCTGCAGAAAGTCCTCCAGCAGGCTCCGCGTAGCTGCGCCCTaGGGGGCCGAGCAGCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: GPKLTSLASSCRKSSSRLRVAAP*GAEQLC Trigger: GCAGAGCTGCTCGGCCCCCCAGGGCGCAGCTACGCG...GAGCCTGCTGGAGGACTTTCTGCAGCTGGAAGCTAAGGATGTCAGTTTTGGCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS-3UTR CCA 90 bp | ATATCCCAAGAAGTTGGTACATGGCCAGGCAGAAATGAATCAGCAGCCGCAGCTGGGCGCGCCGCCTCCTaGCAGGAGCCCAGAAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: ISQEVGTWPGRNESAAAAGRAAS*QEPRSW Trigger: CCAGCTTCTGGGCTCCTGCCAGGAGGCGGCGCGCCC...AGCTGCGGCTGCTGATTCATTTCTGCCTGGCCATGTACCAACTTCTTGGGATAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS-3UTR CCA 90 bp | ATATCCCAAGAAGTTGGTACATGGCCAGGCAGAAATGAATCAGCAGCCGCAGCTTGCTGCAGCAGGCGATaGTGCACCCGGGCCGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: ISQEVGTWPGRNESAAAACCSRR*CTRAAC Trigger: GCAGGCGGCCCGGGTGCACCATCGCCTGCTGCAGCA...AGCTGCGGCTGCTGATTCATTTCTGCCTGGCCATGTACCAACTTCTTGGGATAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS-3UTR GCA 90 bp | GGGCCAAAACTGACATCCTTAGCTTCCAGCTGCAGAAAGTCCTCCAGCAGGCTCCAGCTCTGCCAGGCGTaGATCCCTGTGGTCTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: GPKLTSLASSCRKSSSRLQLCQA*IPVVCC Trigger: GCAACAGACCACAGGGATGCACGCCTGGCAGAGCTG...GAGCCTGCTGGAGGACTTTCTGCAGCTGGAAGCTAAGGATGTCAGTTTTGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS-3UTR GCA 90 bp | GACATCCTTAGCTTCCAGCTGCAGAAAGTCCTCCAGCAGGCTCACCACTGGATCACCTGCCTGTCTCCCTaGAACTCCCACAGACGCTGC | + |
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Preference number: 4 (lower is better) Translates to: DILSFQLQKVLQQAHHWITCLSP*NSHRRC Trigger: GCAGCGTCTGTGGGAGTTGCAGGGAGACAGGCAGGT...GATCCAGTGGTGAGCCTGCTGGAGGACTTTCTGCAGCTGGAAGCTAAGGATGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS-3UTR GCA 90 bp | TTCTCCTCCACAGCTCTATTCTCTATCTCAAGAGCCCTCGAAGCTGACTTCACAGGGGCCGAGCAGCTCTaGCAGGCGTGCATCCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: FSSTALFSISRALEADFTGAEQL*QACIPV Trigger: CACAGGGATGCACGCCTGGCAGAGCTGCTCGGCCCC...TGTGAAGTCAGCTTCGAGGGCTCTTGAGATAGAGAATAGAGCTGTGGAGGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS-3UTR GCA 90 bp | CCTCTGGTGCAATCATCTCAGAGAGGCTTGAACAAAACCCTTTGTGGAATTAGCGGACCCCGGCGCAGCTaGTGCAGCAGGCGATGGTGC | + |
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Preference number: 4 (lower is better) Translates to: PLVQSSQRGLNKTLCGISGPRRS*CSRRWC Trigger: GCACCATCGCCTGCTGCAGCAGCTGCGCCGGGGTCC...GCTAATTCCACAAAGGGTTTTGTTCAAGCCTCTCTGAGATGATTGCACCAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS-3UTR GCA 90 bp | CTCACCACTGGATCAGAAAGTCGGGGTGTTAAAATATATCCCAAGAAGTTGGTATGCAGCAGGCGATGGTaGACCCGGGCCGCCTGCACC | + |
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Preference number: 4 (lower is better) Translates to: LTTGSESRGVKIYPKKLVCSRRW*TRAACT Trigger: GGTGCAGGCGGCCCGGGTGCACCATCGCCTGCTGCA...TACCAACTTCTTGGGATATATTTTAACACCCCGACTTTCTGATCCAGTGGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS-3UTR CCA 90 bp | CTATGGAGTTTCACCCCTAGTCCTCTTTGTAGTTTTTATCCTGAGACAAGGTCTGCCGCGGCCGAGCCATaGTCCCCATGCAGGCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: LWSFTPSPLCSFYPETRSAAAEP*SPCRPG Trigger: ACCAGGCCTGCATGGGGACCATGGCTCGGCCGCGGC...AGACCTTGTCTCAGGATAAAAACTACAAAGAGGACTAGGGGTGAAACTCCATAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS-3UTR GCA 90 bp | CTGCCCAGGCTAGTTCTAAACTTAAACCTAGAGCTTTCAATTCTCCTTTCTTGGTGCCGGCAGGACGCATaGGCAGTCCACCTGCACCTG | + |
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Preference number: 4 (lower is better) Translates to: LPRLVLNLNLELSILLSWCRQDA*AVHLHL Trigger: CAGGTGCAGGTGGACTGCGCATGCGTCCTGCCGGCA...CCAAGAAAGGAGAATTGAAAGCTCTAGGTTTAAGTTTAGAACTAGCCTGGGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS-3UTR GCA 90 bp | CTATGGAGTTTCACCCCTAGTCCTCTTTGTAGTTTTTATCCTGAGACAAGGTCTCATGCGCAGTCCACCTaGACCTGCCTGTCTCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: LWSFTPSPLCSFYPETRSHAQST*TCLSPC Trigger: GCAGGGAGACAGGCAGGTGCAGGTGGACTGCGCATG...AGACCTTGTCTCAGGATAAAAACTACAAAGAGGACTAGGGGTGAAACTCCATAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS-3UTR GCA 90 bp | ATATCCCAAGAAGTTGGTACATGGCCAGGCAGAAATGAATCAGCAGCCGCAGCTTGGCGTAGGTGGCTGTaGTATGCCAGTACCTGTCTA | + |
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Preference number: 4 (lower is better) Translates to: ISQEVGTWPGRNESAAAAWRRWL*YASTCL Trigger: TAGACAGGTACTGGCATAGCACAGCCACCTACGCCA...AGCTGCGGCTGCTGATTCATTTCTGCCTGGCCATGTACCAACTTCTTGGGATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS-3UTR CCA 90 bp | CTCACCACTGGATCAGAAAGTCGGGGTGTTAAAATATATCCCAAGAAGTTGGTAAGGTCCCCTGGCCACTaGTACACAGGGTGGTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: LTTGSESRGVKIYPKKLVRSPGH*YTGWWA Trigger: TGCCCACCACCCTGTGTACCAGTGGCCAGGGGACCT...TACCAACTTCTTGGGATATATTTTAACACCCCGACTTTCTGATCCAGTGGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS-3UTR CCA 90 bp | CCTCCACAGCTCTATTCTCTATCTCAAGAGCCCTCGAAGCTGACTTCACATGCAGTGTGGTCTTACCAGTaGCATCCAGTCCTTCAATGG | + |
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Preference number: 4 (lower is better) Translates to: PPQLYSLSQEPSKLTSHAVWSYQ*HPVLQW Trigger: CCATTGAAGGACTGGATGCCACTGGTAAGACCACAC...TGCATGTGAAGTCAGCTTCGAGGGCTCTTGAGATAGAGAATAGAGCTGTGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS-3UTR CCA 90 bp | GGGCCAAAACTGACATCCTTAGCTTCCAGCTGCAGAAAGTCCTCCAGCAGGCTCGACGAAACACATTATTaGCCTCAAGTTCAGCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: GPKLTSLASSCRKSSSRLDETHY*PQVQPL Trigger: AAGAGGCTGAACTTGAGGCCAATAATGTGTTTCGTC...GAGCCTGCTGGAGGACTTTCTGCAGCTGGAAGCTAAGGATGTCAGTTTTGGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS-3UTR TCA 90 bp | CCTCTGGTGCAATCATCTCAGAGAGGCTTGAACAAAACCCTTTGTGGAATTAGCGTAGGAGGACAGCCTTaGGAGACTCTGACACTGACT | + |
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Preference number: 4 (lower is better) Translates to: PLVQSSQRGLNKTLCGISVGGQP*ETLTLT Trigger: AGTCAGTGTCAGAGTCTCTCAAGGCTGTCCTCCTAC...GCTAATTCCACAAAGGGTTTTGTTCAAGCCTCTCTGAGATGATTGCACCAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| 3UTR CAA 72 bp | GAGGAAACGCATGATGTAAACATCAACAGAAACAAATaGGTGTGCAGCGCATCCCGATCAGCACAGCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: EETHDVNINRNK*VCSASRSAQPA Trigger: AGCAGGCTGTGCTGATCGGGATGCGCTGCACACCAATTTGTTTCTGTTGATGTTTACATCATGCGTTTCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS-3UTR TCA 90 bp | CCAGATTCTGAACCCAAGGATAGAATATTCAATACCATGTTCTACTATGGAGTTTCCCCCAGGACGAAGTaGGTCAGGGAGCAATCTGGC | + |
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Preference number: 4 (lower is better) Translates to: PDSEPKDRIFNTMFYYGVSPRTK*VREQSG Trigger: GCCAGATTGCTCCCTGACTCACTTCGTCCTGGGGGA...AACTCCATAGTAGAACATGGTATTGAATATTCTATCCTTGGGTTCAGAATCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS-3UTR GCA 90 bp | CCTAGAGCTTTCAATTCTCCTTTCTTGGCCTCCCAAGTAAATATTTCTAGAGGAATCCCTGTGGTCTGTTaGATCCCCCAGGACGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: PRAFNSPFLASQVNISRGIPVVC*IPQDEV Trigger: CACTTCGTCCTGGGGGATGCAACAGACCACAGGGAT...TCCTCTAGAAATATTTACTTGGGAGGCCAAGAAAGGAGAATTGAAAGCTCTAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS-3UTR CCA 90 bp | CTCACCACTGGATCAGAAAGTCGGGGTGTTAAAATATATCCCAAGAAGTTGGTATGGAACTTCCCTTTCTaGACCTCCTTTGGGCACTGG | + |
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Preference number: 4 (lower is better) Translates to: LTTGSESRGVKIYPKKLVWNFPF*TSFGHW Trigger: CCAGTGCCCAAAGGAGGTCCAGAAAGGGAAGTTCCA...TACCAACTTCTTGGGATATATTTTAACACCCCGACTTTCTGATCCAGTGGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS-3UTR CCA 90 bp | GTGCAATCATCTCAGAGAGGCTTGAACAAAACCCTTTGTGGAATTAGCTGCCACTCAATGGCAATGACCTaGAACTTCCCTTTCTGGACC | + |
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Preference number: 4 (lower is better) Translates to: VQSSQRGLNKTLCGISCHSMAMT*NFPFWT Trigger: GGTCCAGAAAGGGAAGTTCCAGGTCATTGCCATTGA...GTGGCAGCTAATTCCACAAAGGGTTTTGTTCAAGCCTCTCTGAGATGATTGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| 3UTR CAA 72 bp | TCAGAAAGTCGGGGTGTTAAAATATATCCCAAGAAGTaGGTACATGGCCAGGCAGAAATGAATCAGCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: SESRGVKIYPKK*VHGQAEMNQQP Trigger: CGGCTGCTGATTCATTTCTGCCTGGCCATGTACCAACTTCTTGGGATATATTTTAACACCCCGACTTTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS-3UTR TCA 90 bp | CTATGGAGTTTCACCCCTAGTCCTCTTTGTAGTTTTTATCCTGAGACAAGGTCTGTCCTTCAATGGCAATaGCCTGGAACTTCCCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: LWSFTPSPLCSFYPETRSVLQWQ*PGTSLS Trigger: AGAAAGGGAAGTTCCAGGTCATTGCCATTGAAGGAC...AGACCTTGTCTCAGGATAAAAACTACAAAGAGGACTAGGGGTGAAACTCCATAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS-3UTR CCA 90 bp | CTCACCACTGGATCAGAAAGTCGGGGTGTTAAAATATATCCCAAGAAGTTGGTAAGAGTTAAGCAGATCTaGCAGCAATGGGTGCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: LTTGSESRGVKIYPKKLVRVKQI*QQWVQM Trigger: CATCTGCACCCATTGCTGCCAGATCTGCTTAACTCT...TACCAACTTCTTGGGATATATTTTAACACCCCGACTTTCTGATCCAGTGGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS-3UTR CCA 90 bp | GATTCTGAACCCAAGGATAGAATATTCAATACCATGTTCTACTATGGAGTTTCATGGTACACAGGGTGGTaGGCAGGGGGTAGGTACTGT | + |
|
Preference number: 4 (lower is better) Translates to: DSEPKDRIFNTMFYYGVSWYTGW*AGGRYC Trigger: ACAGTACCTACCCCCTGCCCACCACCCTGTGTACCA...TGAAACTCCATAGTAGAACATGGTATTGAATATTCTATCCTTGGGTTCAGAATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS-3UTR GCA 90 bp | ACCCCAGATTCTGAACCCAAGGATAGAATATTCAATACCATGTTCTACTATGGAGACTCTGACACTGACTaGGTCAGTGTGGTCTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: TPDSEPKDRIFNTMFYYGDSDTD*VSVVLP Trigger: TGGTAAGACCACACTGACGCAGTCAGTGTCAGAGTC...TCCATAGTAGAACATGGTATTGAATATTCTATCCTTGGGTTCAGAATCTGGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS-3UTR CCA 90 bp | ACCCCAGATTCTGAACCCAAGGATAGAATATTCAATACCATGTTCTACTATGGATACTGCCCGGGCTTCTaGAATAAAGGATGTGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: TPDSEPKDRIFNTMFYYGYCPGF*NKGCAL Trigger: GAGTGCACATCCTTTATTCCAGAAGCCCGGGCAGTA...TCCATAGTAGAACATGGTATTGAATATTCTATCCTTGGGTTCAGAATCTGGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS-3UTR CCA 90 bp | ACCCCAGATTCTGAACCCAAGGATAGAATATTCAATACCATGTTCTACTATGGAAGAAGCTTGCTCAGTTaGCATCTCTGTAAAGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: TPDSEPKDRIFNTMFYYGRSLLS*HLCKGP Trigger: GGGTCCTTTACAGAGATGCCAACTGAGCAAGCTTCT...TCCATAGTAGAACATGGTATTGAATATTCTATCCTTGGGTTCAGAATCTGGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS-3UTR GCA 90 bp | CCAGATTCTGAACCCAAGGATAGAATATTCAATACCATGTTCTACTATGGAGTTAGCTCTAAAACCTTCTaGAGGACTGTCTCTCTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: PDSEPKDRIFNTMFYYGVSSKTF*RTVSLE Trigger: CTCGAGAGAGACAGTCCTGCAGAAGGTTTTAGAGCT...AACTCCATAGTAGAACATGGTATTGAATATTCTATCCTTGGGTTCAGAATCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS CCA 90 bp | TCCACAGTGAAGCGCCGCGGCCGAGCCATGGTCCCCATGCAGGCCTaGTGTCGCCCGCACAGCCTCCGCGACAGACGCCCGAGCCACAGT | + |
|
Preference number: 5 (lower is better) Translates to: STVKRRGRAMVPMQA*CRPHSLRDRRPSHS Trigger: ACTGTGGCTCGGGCGTCTGTCGCGGAGGCTGTGCGGGCGACACCAGGCCTGCATGGGGACCATGGCTCGGCCGCGGCGCTTCACTGTGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS CCA 90 bp | GCCTTCGCCTGGAGCCAGGGGCACACACAGCGCGTAGCTGCGCCCTaGGGGGCCGAGCAGCTCTGCCAGGCGTGCATCCCTGTGGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: AFAWSQGHTQRVAAP*GAEQLCQACIPVVC Trigger: ACAGACCACAGGGATGCACGCCTGGCAGAGCTGCTCGGCCCCCCAGGGCGCAGCTACGCGCTGTGTGTGCCCCTGGCTCCAGGCGAAGGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS CCA 90 bp | TGCAACTCCCACAGACGCTGCCACAGCAAACCCTGGGAGTCGGCCTaGAACTCGGCCAACTGCGGGCGCGCCGCCTCCTGGCAGGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: CNSHRRCHSKPWESA*NSANCGRAASWQEP Trigger: GGGCTCCTGCCAGGAGGCGGCGCGCCCGCAGTTGGCCGAGTTCCAGGCCGACTCCCAGGGTTTGCTGTGGCAGCGTCTGTGGGAGTTGCA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS CCA 90 bp | TGCCTGTCTCCCTGCAACTCCCACAGACGCTGCCACAGCAAACCCTaGGAGTCGGCCTGGAACTCGGCCAACTGCGGGCGCGCCGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CLSPCNSHRRCHSKP*ESAWNSANCGRAAS Trigger: GGAGGCGGCGCGCCCGCAGTTGGCCGAGTTCCAGGCCGACTCCCAGGGTTTGCTGTGGCAGCGTCTGTGGGAGTTGCAGGGAGACAGGCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS GCA 90 bp | AGAAGCTTGCTCAGTTGGCATCTCTGTAAAGGACCCCGGCGCAGCTaGTGCAGCAGGCGATGGTGCACCCGGGCCGCCTGCACCCGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RSLLSWHLCKGPRRS*CSRRWCTRAACTRG Trigger: GCCCCGGGTGCAGGCGGCCCGGGTGCACCATCGCCTGCTGCAGCAGCTGCGCCGGGGTCCTTTACAGAGATGCCAACTGAGCAAGCTTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS GCA 90 bp | GCCGGCAGGACGCATGCGCAGTCCACCTGCACCTGCCTGTCTCCCTaGAACTCCCACAGACGCTGCCACAGCAAACCCTGGGAGTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AGRTHAQSTCTCLSP*NSHRRCHSKPWESA Trigger: GGCCGACTCCCAGGGTTTGCTGTGGCAGCGTCTGTGGGAGTTGCAGGGAGACAGGCAGGTGCAGGTGGACTGCGCATGCGTCCTGCCGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS TCA 90 bp | GCCAGGCGTGCATCCCTGTGGTCTGTTGCATCCCCCAGGACGAAGTaGGTCAGGGAGCAATCTGGCAGCTCCACAGTGAAGCGCCGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: ARRASLWSVASPRTK*VREQSGSSTVKRRG Trigger: GCCGCGGCGCTTCACTGTGGAGCTGCCAGATTGCTCCCTGACTCACTTCGTCCTGGGGGATGCAACAGACCACAGGGATGCACGCCTGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS GCA 90 bp | CAGTCCACCTGCACCTGCCTGTCTCCCTGCAACTCCCACAGACGCTaGCACAGCAAACCCTGGGAGTCGGCCTGGAACTCGGCCAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: QSTCTCLSPCNSHRR*HSKPWESAWNSANC Trigger: GCAGTTGGCCGAGTTCCAGGCCGACTCCCAGGGTTTGCTGTGGCAGCGTCTGTGGGAGTTGCAGGGAGACAGGCAGGTGCAGGTGGACTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS GCA 90 bp | TGGCAGCAATGGGTGCAGATGAGGTTCCTGTGCCGGCAGGACGCATaGGCAGTCCACCTGCACCTGCCTGTCTCCCTGCAACTCCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: WQQWVQMRFLCRQDA*AVHLHLPVSLQLPQ Trigger: CTGTGGGAGTTGCAGGGAGACAGGCAGGTGCAGGTGGACTGCGCATGCGTCCTGCCGGCACAGGAACCTCATCTGCACCCATTGCTGCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS CCA 90 bp | GTGGTCTGTTGCATCCCCCAGGACGAAGTGAGTCAGGGAGCAATCTaGCAGCTCCACAGTGAAGCGCCGCGGCCGAGCCATGGTCCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VVCCIPQDEVSQGAI*QLHSEAPRPSHGPH Trigger: ATGGGGACCATGGCTCGGCCGCGGCGCTTCACTGTGGAGCTGCCAGATTGCTCCCTGACTCACTTCGTCCTGGGGGATGCAACAGACCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS CCA 90 bp | AAGTCGGGCTTCAGCAGGTCCCCTGGCCACTGGTACACAGGGTGGTaGGCAGGGGGTAGGTACTGTAGGCCTCCACTCACCTCAGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: KSGFSRSPGHWYTGW*AGGRYCRPPLTSVA Trigger: AGCTACTGAGGTGAGTGGAGGCCTACAGTACCTACCCCCTGCCCACCACCCTGTGTACCAGTGGCCAGGGGACCTGCTGAAGCCCGACTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS CCA 90 bp | CCTTGCCGCGTCCCGGTCTTGGAACACCGCAGAGTTAAGCAGATCTaGCAGCAATGGGTGCAGATGAGGTTCCTGTGCCGGCAGGACGCA | + |
|
Preference number: 5 (lower is better) Translates to: PCRVPVLEHRRVKQI*QQWVQMRFLCRQDA Trigger: TGCGTCCTGCCGGCACAGGAACCTCATCTGCACCCATTGCTGCCAGATCTGCTTAACTCTGCGGTGTTCCAAGACCGGGACGCGGCAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS GCA 90 bp | AGAGTTAAGCAGATCTGGCAGCAATGGGTGCAGATGAGGTTCCTGTaGCGGCAGGACGCATGCGCAGTCCACCTGCACCTGCCTGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RVKQIWQQWVQMRFL*RQDACAVHLHLPVS Trigger: GGAGACAGGCAGGTGCAGGTGGACTGCGCATGCGTCCTGCCGGCACAGGAACCTCATCTGCACCCATTGCTGCCAGATCTGCTTAACTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS CCA 90 bp | GTCCCGGTCTTGGAACACCGCAGAGTTAAGCAGATCTGGCAGCAATaGGTGCAGATGAGGTTCCTGTGCCGGCAGGACGCATGCGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: VPVLEHRRVKQIWQQ*VQMRFLCRQDACAV Trigger: GACTGCGCATGCGTCCTGCCGGCACAGGAACCTCATCTGCACCCATTGCTGCCAGATCTGCTTAACTCTGCGGTGTTCCAAGACCGGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS GCA 90 bp | CCGGGCTTCTGGAATAAAGGATGTGCACTCTTCCAAGACAGCCCTTaGCGCGTCCCGGTCTTGGAACACCGCAGAGTTAAGCAGATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PGFWNKGCALFQDSP*RVPVLEHRRVKQIW Trigger: CCAGATCTGCTTAACTCTGCGGTGTTCCAAGACCGGGACGCGGCAAGGGCTGTCTTGGAAGAGTGCACATCCTTTATTCCAGAAGCCCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS CCA 90 bp | AAGGATGTGCACTCTTCCAAGACAGCCCTTGCCGCGTCCCGGTCTTaGAACACCGCAGAGTTAAGCAGATCTGGCAGCAATGGGTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KDVHSSKTALAASRS*NTAELSRSGSNGCR Trigger: TCTGCACCCATTGCTGCCAGATCTGCTTAACTCTGCGGTGTTCCAAGACCGGGACGCGGCAAGGGCTGTCTTGGAAGAGTGCACATCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS CCA 90 bp | ACCTTCTGCAGGACTGTCTCTCTCGAGGGGCTGGCATCCACCAGATaGCAGCTTGGGTTCTCCATACGCTGGTACGTCATTTCCACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TFCRTVSLEGLASTR*QLGFSIRWYVISTF Trigger: GAAGGTGGAAATGACGTACCAGCGTATGGAGAACCCAAGCTGCCATCTGGTGGATGCCAGCCCCTCGAGAGAGACAGTCCTGCAGAAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS CCA 90 bp | CAGGACTGTCTCTCTCGAGGGGCTGGCATCCACCAGATGGCAGCTTaGGTTCTCCATACGCTGGTACGTCATTTCCACCTTCTGACGAAA | + |
|
Preference number: 5 (lower is better) Translates to: QDCLSRGAGIHQMAA*VLHTLVRHFHLLTK Trigger: TTTCGTCAGAAGGTGGAAATGACGTACCAGCGTATGGAGAACCCAAGCTGCCATCTGGTGGATGCCAGCCCCTCGAGAGAGACAGTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS CCA 90 bp | GTGGCATCCAGTCCTTCAATGGCAATGACCTGGAACTTCCCTTTCTaGACCTCCTTTGGGCACTGGTCAACTAGGTCAAGTACTGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: VASSPSMAMTWNFPF*TSFGHWSTRSSTAR Trigger: CCGGGCAGTACTTGACCTAGTTGACCAGTGCCCAAAGGAGGTCCAGAAAGGGAAGTTCCAGGTCATTGCCATTGAAGGACTGGATGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS TCA 90 bp | GCGTCAGTGTGGTCTTACCAGTGGCATCCAGTCCTTCAATGGCAATaGCCTGGAACTTCCCTTTCTGGACCTCCTTTGGGCACTGGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: ASVWSYQWHPVLQWQ*PGTSLSGPPLGTGQ Trigger: TTGACCAGTGCCCAAAGGAGGTCCAGAAAGGGAAGTTCCAGGTCATTGCCATTGAAGGACTGGATGCCACTGGTAAGACCACACTGACGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS CCA 90 bp | AGTGTGGTCTTACCAGTGGCATCCAGTCCTTCAATGGCAATGACCTaGAACTTCCCTTTCTGGACCTCCTTTGGGCACTGGTCAACTAGG | + |
|
Preference number: 5 (lower is better) Translates to: SVVLPVASSPSMAMT*NFPFWTSFGHWSTR Trigger: CCTAGTTGACCAGTGCCCAAAGGAGGTCCAGAAAGGGAAGTTCCAGGTCATTGCCATTGAAGGACTGGATGCCACTGGTAAGACCACACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS CCA 90 bp | ATGGCAATGACCTGGAACTTCCCTTTCTGGACCTCCTTTGGGCACTaGTCAACTAGGTCAAGTACTGCCCGGGCTTCTGGAATAAAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: MAMTWNFPFWTSFGH*STRSSTARASGIKD Trigger: ATCCTTTATTCCAGAAGCCCGGGCAGTACTTGACCTAGTTGACCAGTGCCCAAAGGAGGTCCAGAAAGGGAAGTTCCAGGTCATTGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS-3UTR CAA 90 bp | CCTCTGGTGCAATCATCTCAGAGAGGCTTGAACAAAACCCTTTGTGGAATTAGCCATCCCTGTGGTCTGTaGCATCCCCCAGGACGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: PLVQSSQRGLNKTLCGISHPCGL*HPPGRS Trigger: ACTTCGTCCTGGGGGATGCAACAGACCACAGGGATG...GCTAATTCCACAAAGGGTTTTGTTCAAGCCTCTCTGAGATGATTGCACCAGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS TCA 90 bp | AACACATTATTGGCCTCAAGTTCAGCCTCTTCTTTAGTTTTCTCCTaGCCCCGGCCCTGCAGTCTCCGCACTCTCTCCTCAGAATTCACA | + |
|
Preference number: 5 (lower is better) Translates to: NTLLASSSASSLVFS*PRPCSLRTLSSEFT Trigger: TGTGAATTCTGAGGAGAGAGTGCGGAGACTGCAGGGCCGGGGTCAGGAGAAAACTAAAGAAGAGGCTGAACTTGAGGCCAATAATGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS TCA 90 bp | TGGCAGCTTGGGTTCTCCATACGCTGGTACGTCATTTCCACCTTCTaGCGAAACACATTATTGGCCTCAAGTTCAGCCTCTTCTTTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: WQLGFSIRWYVISTF*RNTLLASSSASSLV Trigger: AACTAAAGAAGAGGCTGAACTTGAGGCCAATAATGTGTTTCGTCAGAAGGTGGAAATGACGTACCAGCGTATGGAGAACCCAAGCTGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS-3UTR CAA 90 bp | CTATGGAGTTTCACCCCTAGTCCTCTTTGTAGTTTTTATCCTGAGACAAGGTCTCTTTCTGGACCTCCTTaGGGCACTGGTCAACTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LWSFTPSPLCSFYPETRSLSGPP*GTGQLG Trigger: ACCTAGTTGACCAGTGCCCAAAGGAGGTCCAGAAAG...AGACCTTGTCTCAGGATAAAAACTACAAAGAGGACTAGGGGTGAAACTCCATAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS-3UTR CAA 90 bp | ACCCCAGATTCTGAACCCAAGGATAGAATATTCAATACCATGTTCTACTATGGATGTAGGAGGACAGCCTaGAGAGACTCTGACACTGAC | + |
|
Preference number: 5 (lower is better) Translates to: TPDSEPKDRIFNTMFYYGCRRTA*RDSDTD Trigger: GTCAGTGTCAGAGTCTCTCAAGGCTGTCCTCCTACA...TCCATAGTAGAACATGGTATTGAATATTCTATCCTTGGGTTCAGAATCTGGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS CCA 72 bp | CCGGGCCGCCTGCACCCGGGGCCCGCAGCCTTCGCCTaGAGCCAGGGGCACACACAGCGCGTAGCTGCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: PGRLHPGPAAFA*SQGHTQRVAAP Trigger: GGGCGCAGCTACGCGCTGTGTGTGCCCCTGGCTCCAGGCGAAGGCTGCGGGCCCCGGGTGCAGGCGGCCCGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS CCA 72 bp | AAGCGCCGCGGCCGAGCCATGGTCCCCATGCAGGCCTaGTGTCGCCCGCACAGCCTCCGCGACAGACGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: KRRGRAMVPMQA*CRPHSLRDRRP Trigger: CGGGCGTCTGTCGCGGAGGCTGTGCGGGCGACACCAGGCCTGCATGGGGACCATGGCTCGGCCGCGGCGCTT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS CCA 72 bp | TGGAGCCAGGGGCACACACAGCGCGTAGCTGCGCCCTaGGGGGCCGAGCAGCTCTGCCAGGCGTGCATCCCT | + |
|
Preference number: 6 (lower is better) Translates to: WSQGHTQRVAAP*GAEQLCQACIP Trigger: AGGGATGCACGCCTGGCAGAGCTGCTCGGCCCCCCAGGGCGCAGCTACGCGCTGTGTGTGCCCCTGGCTCCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS CCA 72 bp | TGCGGGCGCGCCGCCTCCTGGCAGGAGCCCAGAAGCTaGAGCAAGTCGCGCCGAGTGTCCGGGTGGTCGCAA | + |
|
Preference number: 6 (lower is better) Translates to: CGRAASWQEPRS*SKSRRVSGWSQ Trigger: TTGCGACCACCCGGACACTCGGCGCGACTTGCTCCAGCTTCTGGGCTCCTGCCAGGAGGCGGCGCGCCCGCA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS CCA 72 bp | GCCTGGAACTCGGCCAACTGCGGGCGCGCCGCCTCCTaGCAGGAGCCCAGAAGCTGGAGCAAGTCGCGCCGA | + |
|
Preference number: 6 (lower is better) Translates to: AWNSANCGRAAS*QEPRSWSKSRR Trigger: TCGGCGCGACTTGCTCCAGCTTCTGGGCTCCTGCCAGGAGGCGGCGCGCCCGCAGTTGGCCGAGTTCCAGGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS GCA 72 bp | AGCAAACCCTGGGAGTCGGCCTGGAACTCGGCCAACTaGGGGCGCGCCGCCTCCTGGCAGGAGCCCAGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: SKPWESAWNSAN*GRAASWQEPRS Trigger: GCTTCTGGGCTCCTGCCAGGAGGCGGCGCGCCCGCAGTTGGCCGAGTTCCAGGCCGACTCCCAGGGTTTGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS CCA 72 bp | CACAGACGCTGCCACAGCAAACCCTGGGAGTCGGCCTaGAACTCGGCCAACTGCGGGCGCGCCGCCTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: HRRCHSKPWESA*NSANCGRAASW Trigger: CCAGGAGGCGGCGCGCCCGCAGTTGGCCGAGTTCCAGGCCGACTCCCAGGGTTTGCTGTGGCAGCGTCTGTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS GCA 72 bp | CTCAGTTGGCATCTCTGTAAAGGACCCCGGCGCAGCTaGTGCAGCAGGCGATGGTGCACCCGGGCCGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LSWHLCKGPRRS*CSRRWCTRAAC Trigger: GCAGGCGGCCCGGGTGCACCATCGCCTGCTGCAGCAGCTGCGCCGGGGTCCTTTACAGAGATGCCAACTGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS CCA 72 bp | CCCAGAAGCTGGAGCAAGTCGCGCCGAGTGTCCGGGTaGTCGCAAGGGTCCCGCAGCAGGAAGCCATGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PRSWSKSRRVSG*SQGSRSRKPCW Trigger: CCAGCATGGCTTCCTGCTGCGGGACCCTTGCGACCACCCGGACACTCGGCGCGACTTGCTCCAGCTTCTGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS CCA 72 bp | CCCTGCAACTCCCACAGACGCTGCCACAGCAAACCCTaGGAGTCGGCCTGGAACTCGGCCAACTGCGGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: PCNSHRRCHSKP*ESAWNSANCGR Trigger: GCGCCCGCAGTTGGCCGAGTTCCAGGCCGACTCCCAGGGTTTGCTGTGGCAGCGTCTGTGGGAGTTGCAGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS GCA 72 bp | TGTGCCGGCAGGACGCATGCGCAGTCCACCTGCACCTaGCTGTCTCCCTGCAACTCCCACAGACGCTGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: CAGRTHAQSTCT*LSPCNSHRRCH Trigger: GTGGCAGCGTCTGTGGGAGTTGCAGGGAGACAGGCAGGTGCAGGTGGACTGCGCATGCGTCCTGCCGGCACA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS GCA 72 bp | GGTTCCTGTGCCGGCAGGACGCATGCGCAGTCCACCTaGACCTGCCTGTCTCCCTGCAACTCCCACAGACGC | + |
|
Preference number: 6 (lower is better) Translates to: GSCAGRTHAQST*TCLSPCNSHRR Trigger: GCGTCTGTGGGAGTTGCAGGGAGACAGGCAGGTGCAGGTGGACTGCGCATGCGTCCTGCCGGCACAGGAACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS TCA 72 bp | CGAAGTGAGTCAGGGAGCAATCTGGCAGCTCCACAGTaGAGCGCCGCGGCCGAGCCATGGTCCCCATGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RSESGSNLAAPQ*SAAAEPWSPCR Trigger: CCTGCATGGGGACCATGGCTCGGCCGCGGCGCTTCACTGTGGAGCTGCCAGATTGCTCCCTGACTCACTTCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS GCA 72 bp | TGCACCTGCCTGTCTCCCTGCAACTCCCACAGACGCTaGCACAGCAAACCCTGGGAGTCGGCCTGGAACTCG | + |
|
Preference number: 6 (lower is better) Translates to: CTCLSPCNSHRR*HSKPWESAWNS Trigger: CGAGTTCCAGGCCGACTCCCAGGGTTTGCTGTGGCAGCGTCTGTGGGAGTTGCAGGGAGACAGGCAGGTGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS GCA 72 bp | ACGCATGCGCAGTCCACCTGCACCTGCCTGTCTCCCTaGAACTCCCACAGACGCTGCCACAGCAAACCCTGG | + |
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Preference number: 6 (lower is better) Translates to: THAQSTCTCLSP*NSHRRCHSKPW Trigger: CCAGGGTTTGCTGTGGCAGCGTCTGTGGGAGTTGCAGGGAGACAGGCAGGTGCAGGTGGACTGCGCATGCGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS GCA 72 bp | TGGGTGCAGATGAGGTTCCTGTGCCGGCAGGACGCATaGGCAGTCCACCTGCACCTGCCTGTCTCCCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: WVQMRFLCRQDA*AVHLHLPVSLQ Trigger: TTGCAGGGAGACAGGCAGGTGCAGGTGGACTGCGCATGCGTCCTGCCGGCACAGGAACCTCATCTGCACCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS CCA 72 bp | TTCAGCAGGTCCCCTGGCCACTGGTACACAGGGTGGTaGGCAGGGGGTAGGTACTGTAGGCCTCCACTCACC | + |
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Preference number: 6 (lower is better) Translates to: FSRSPGHWYTGW*AGGRYCRPPLT Trigger: GGTGAGTGGAGGCCTACAGTACCTACCCCCTGCCCACCACCCTGTGTACCAGTGGCCAGGGGACCTGCTGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS CCA 72 bp | AGGACCAAGTCGGGCTTCAGCAGGTCCCCTGGCCACTaGTACACAGGGTGGTGGGCAGGGGGTAGGTACTGT | + |
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Preference number: 6 (lower is better) Translates to: RTKSGFSRSPGH*YTGWWAGGRYC Trigger: ACAGTACCTACCCCCTGCCCACCACCCTGTGTACCAGTGGCCAGGGGACCTGCTGAAGCCCGACTTGGTCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS GCA 72 bp | GAGCAGCTCTGCCAGGCGTGCATCCCTGTGGTCTGTTaGATCCCCCAGGACGAAGTGAGTCAGGGAGCAATC | + |
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Preference number: 6 (lower is better) Translates to: EQLCQACIPVVC*IPQDEVSQGAI Trigger: GATTGCTCCCTGACTCACTTCGTCCTGGGGGATGCAACAGACCACAGGGATGCACGCCTGGCAGAGCTGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS CAA 72 bp | CGAGCAGCTCTGCCAGGCGTGCATCCCTGTGGTCTGTaGCATCCCCCAGGACGAAGTGAGTCAGGGAGCAAT | + |
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Preference number: 6 (lower is better) Translates to: RAALPGVHPCGL*HPPGRSESGSN Trigger: ATTGCTCCCTGACTCACTTCGTCCTGGGGGATGCAACAGACCACAGGGATGCACGCCTGGCAGAGCTGCTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS TCA 72 bp | GCATCCCTGTGGTCTGTTGCATCCCCCAGGACGAAGTaGGTCAGGGAGCAATCTGGCAGCTCCACAGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: ASLWSVASPRTK*VREQSGSSTVK Trigger: CTTCACTGTGGAGCTGCCAGATTGCTCCCTGACTCACTTCGTCCTGGGGGATGCAACAGACCACAGGGATGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS CAA 90 bp | GCAGGACTGTCTCTCTCGAGGGGCTGGCATCCACCAGATGGCAGCTaGGGTTCTCCATACGCTGGTACGTCATTTCCACCTTCTGACGAA | + |
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Preference number: 6 (lower is better) Translates to: AGLSLSRGWHPPDGS*GSPYAGTSFPPSDE Trigger: TTCGTCAGAAGGTGGAAATGACGTACCAGCGTATGGAGAACCCAAGCTGCCATCTGGTGGATGCCAGCCCCTCGAGAGAGACAGTCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS CCA 72 bp | TTGGAACACCGCAGAGTTAAGCAGATCTGGCAGCAATaGGTGCAGATGAGGTTCCTGTGCCGGCAGGACGCA | + |
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Preference number: 6 (lower is better) Translates to: LEHRRVKQIWQQ*VQMRFLCRQDA Trigger: TGCGTCCTGCCGGCACAGGAACCTCATCTGCACCCATTGCTGCCAGATCTGCTTAACTCTGCGGTGTTCCAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS CCA 72 bp | CACTCTTCCAAGACAGCCCTTGCCGCGTCCCGGTCTTaGAACACCGCAGAGTTAAGCAGATCTGGCAGCAAT | + |
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Preference number: 6 (lower is better) Translates to: HSSKTALAASRS*NTAELSRSGSN Trigger: ATTGCTGCCAGATCTGCTTAACTCTGCGGTGTTCCAAGACCGGGACGCGGCAAGGGCTGTCTTGGAAGAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS CCA 72 bp | CTCTCTCGAGGGGCTGGCATCCACCAGATGGCAGCTTaGGTTCTCCATACGCTGGTACGTCATTTCCACCTT | + |
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Preference number: 6 (lower is better) Translates to: LSRGAGIHQMAA*VLHTLVRHFHL Trigger: AAGGTGGAAATGACGTACCAGCGTATGGAGAACCCAAGCTGCCATCTGGTGGATGCCAGCCCCTCGAGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS CCA 72 bp | AGGACTGTCTCTCTCGAGGGGCTGGCATCCACCAGATaGCAGCTTGGGTTCTCCATACGCTGGTACGTCATT | + |
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Preference number: 6 (lower is better) Translates to: RTVSLEGLASTR*QLGFSIRWYVI Trigger: AATGACGTACCAGCGTATGGAGAACCCAAGCTGCCATCTGGTGGATGCCAGCCCCTCGAGAGAGACAGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS TCA 72 bp | TTGGCCTCAAGTTCAGCCTCTTCTTTAGTTTTCTCCTaGCCCCGGCCCTGCAGTCTCCGCACTCTCTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: LASSSASSLVFS*PRPCSLRTLSS Trigger: TGAGGAGAGAGTGCGGAGACTGCAGGGCCGGGGTCAGGAGAAAACTAAAGAAGAGGCTGAACTTGAGGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS CCA 72 bp | CTAAAACCTTCTGCAGGACTGTCTCTCTCGAGGGGCTaGCATCCACCAGATGGCAGCTTGGGTTCTCCATAC | + |
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Preference number: 6 (lower is better) Translates to: LKPSAGLSLSRG*HPPDGSLGSPY Trigger: GTATGGAGAACCCAAGCTGCCATCTGGTGGATGCCAGCCCCTCGAGAGAGACAGTCCTGCAGAAGGTTTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS GCA 72 bp | TGGAATAAAGGATGTGCACTCTTCCAAGACAGCCCTTaGCGCGTCCCGGTCTTGGAACACCGCAGAGTTAAG | + |
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Preference number: 6 (lower is better) Translates to: WNKGCALFQDSP*RVPVLEHRRVK Trigger: CTTAACTCTGCGGTGTTCCAAGACCGGGACGCGGCAAGGGCTGTCTTGGAAGAGTGCACATCCTTTATTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS TCA 72 bp | TGGTCTTACCAGTGGCATCCAGTCCTTCAATGGCAATaGCCTGGAACTTCCCTTTCTGGACCTCCTTTGGGC | + |
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Preference number: 6 (lower is better) Translates to: WSYQWHPVLQWQ*PGTSLSGPPLG Trigger: GCCCAAAGGAGGTCCAGAAAGGGAAGTTCCAGGTCATTGCCATTGAAGGACTGGATGCCACTGGTAAGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS CCA 72 bp | TTACCAGTGGCATCCAGTCCTTCAATGGCAATGACCTaGAACTTCCCTTTCTGGACCTCCTTTGGGCACTGG | + |
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Preference number: 6 (lower is better) Translates to: LPVASSPSMAMT*NFPFWTSFGHW Trigger: CCAGTGCCCAAAGGAGGTCCAGAAAGGGAAGTTCCAGGTCATTGCCATTGAAGGACTGGATGCCACTGGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS CCA 72 bp | AGTCCTTCAATGGCAATGACCTGGAACTTCCCTTTCTaGACCTCCTTTGGGCACTGGTCAACTAGGTCAAGT | + |
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Preference number: 6 (lower is better) Translates to: SPSMAMTWNFPF*TSFGHWSTRSS Trigger: ACTTGACCTAGTTGACCAGTGCCCAAAGGAGGTCCAGAAAGGGAAGTTCCAGGTCATTGCCATTGAAGGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS TCA 72 bp | GGGTTCTCCATACGCTGGTACGTCATTTCCACCTTCTaGCGAAACACATTATTGGCCTCAAGTTCAGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: GFSIRWYVISTF*RNTLLASSSAS Trigger: AGAGGCTGAACTTGAGGCCAATAATGTGTTTCGTCAGAAGGTGGAAATGACGTACCAGCGTATGGAGAACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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| CDS CAA 72 bp | GTGCTATGCCAGTACCTGTCTACAATAACAGGAAAGTaGGTTGATTCTTTAGCTATTTCAGAAGCCACGAGA | + |
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Preference number: 6 (lower is better) Translates to: VLCQYLSTITGK*VDSLAISEATR Trigger: TCTCGTGGCTTCTGAAATAGCTAAAGAATCAACCAACTTTCCTGTTATTGTAGACAGGTACTGGCATAGCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020969.5 |
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