Pregenerated sensors for CISD3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078695Ensembl transcript IDs: ENSMUST00000107583.3, ENSMUST00000107584.8, ENSMUST00000107585.9
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CAGTGTTTATTGACAGCTTTACCGGATGCTGGACCTGGCTCTCAGCTGCCCAACACAAGATGGGGTCCTTaGAGGTTCCCTTCCATGTGT | + |
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Preference number: 2 (lower is better) Translates to: QCLLTALPDAGPGSQLPNTRWGP*RFPSMC Trigger: ACACATGGAAGGGAACCTCCAAGGACCCCATCTTGT...GTTGGGCAGCTGAGAGCCAGGTCCAGCATCCGGTAAAGCTGTCAATAAACACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| 3UTR CAA 90 bp | GCTCTCAGCTGCCCAACAGGAGAATACAGGTTTTTCAGGGTACAATaGCTAACAAGATGGGGTCCTTGGAGGTTCCCTTCCATGTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: ALSCPTGEYRFFRVQ*LTRWGPWRFPSMCG Trigger: GCCACACATGGAAGGGAACCTCCAAGGACCCCATCTTGTTAGCAATTGTACCCTGAAAAACCTGTATTCTCCTGTTGGGCAGCTGAGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| 3UTR-3UTR CCA 90 bp | TCAGTGTTTATTGACAGCTTTACCGGATGCTGGACCTGGCTCTCAGCTGCCCAACAATTGCTAACAAGATaGGGTCCTTGGAGGTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: SVFIDSFTGCWTWLSAAQQLLTR*GPWRFP Trigger: AGGGAACCTCCAAGGACCCCATCTTGTTAGCAATTG...TTGGGCAGCTGAGAGCCAGGTCCAGCATCCGGTAAAGCTGTCAATAAACACTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| 3UTR-3UTR GCA 90 bp | GAATACAGGTTTTTCAGGGTACAATTGCTAACAAGATGGGGTCCTTGGAGGTTCGTGGCTCAGCATTACTaGCTGGAGTCACAGTACCCC | + |
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Preference number: 2 (lower is better) Translates to: EYRFFRVQLLTRWGPWRFVAQHY*LESQYP Trigger: GGGGTACTGTGACTCCAGGCAGTAATGCTGAGCCAC...GAACCTCCAAGGACCCCATCTTGTTAGCAATTGTACCCTGAAAAACCTGTATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| 3UTR GCA 72 bp | GGGCAGGCCTCAGTGTTTATTGACAGCTTTACCGGATaGTGGACCTGGCTCTCAGCTGCCCAACAGGAGAAT | + |
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Preference number: 3 (lower is better) Translates to: GQASVFIDSFTG*WTWLSAAQQEN Trigger: ATTCTCCTGTTGGGCAGCTGAGAGCCAGGTCCAGCATCCGGTAAAGCTGTCAATAAACACTGAGGCCTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| 3UTR CCA 72 bp | CAGGCCTCAGTGTTTATTGACAGCTTTACCGGATGCTaGACCTGGCTCTCAGCTGCCCAACAGGAGAATACA | + |
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Preference number: 3 (lower is better) Translates to: QASVFIDSFTGC*TWLSAAQQENT Trigger: TGTATTCTCCTGTTGGGCAGCTGAGAGCCAGGTCCAGCATCCGGTAAAGCTGTCAATAAACACTGAGGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| 3UTR CCA 72 bp | TCAGTGTTTATTGACAGCTTTACCGGATGCTGGACCTaGCTCTCAGCTGCCCAACAGGAGAATACAGGTTTT | + |
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Preference number: 3 (lower is better) Translates to: SVFIDSFTGCWT*LSAAQQENTGF Trigger: AAAACCTGTATTCTCCTGTTGGGCAGCTGAGAGCCAGGTCCAGCATCCGGTAAAGCTGTCAATAAACACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| 3UTR CCA 72 bp | TTTTTCAGGGTACAATTGCTAACAAGATGGGGTCCTTaGAGGTTCCCTTCCATGTGTGGCTCAGCATTACTG | + |
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Preference number: 3 (lower is better) Translates to: FFRVQLLTRWGP*RFPSMCGSALL Trigger: CAGTAATGCTGAGCCACACATGGAAGGGAACCTCCAAGGACCCCATCTTGTTAGCAATTGTACCCTGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| 3UTR CCA 72 bp | GAATACAGGTTTTTCAGGGTACAATTGCTAACAAGATaGGGTCCTTGGAGGTTCCCTTCCATGTGTGGCTCA | + |
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Preference number: 3 (lower is better) Translates to: EYRFFRVQLLTR*GPWRFPSMCGS Trigger: TGAGCCACACATGGAAGGGAACCTCCAAGGACCCCATCTTGTTAGCAATTGTACCCTGAAAAACCTGTATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS-3UTR CCA 90 bp | TACAGGTTTTTCAGGGTACAATTGCTAACAAGATGGGGTCCTTGGAGGTTCCCTATACGGCTGGGCCGGTaGAGGCGGGGCCGAACGGCC | + |
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Preference number: 4 (lower is better) Translates to: YRFFRVQLLTRWGPWRFPIRLGR*RRGRTA Trigger: GGCCGTTCGGCCCCGCCTCCACCGGCCCAGCCGTAT...AGGGAACCTCCAAGGACCCCATCTTGTTAGCAATTGTACCCTGAAAAACCTGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107585.9 |
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| CDS-3UTR GCA 90 bp | TTATTGACAGCTTTACCGGATGCTGGACCTGGCTCTCAGCTGCCCAACAGGAGAGCCGCTGAGTGGCCTTaGAGGTACATAGGGCCACTG | + |
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Preference number: 4 (lower is better) Translates to: LLTALPDAGPGSQLPNRRAAEWP*RYIGPL Trigger: CAGTGGCCCTATGTACCTGCAAGGCCACTCAGCGGC...TCTCCTGTTGGGCAGCTGAGAGCCAGGTCCAGCATCCGGTAAAGCTGTCAATAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS-3UTR CCA 90 bp | AGATGGGGTCCTTGGAGGTTCCCTTCCATGTGTGGCTCAGCATTACTGCCTGGACTTCTGTGCCACCACTaGCTTGGCTGGGTCTTTGGG | + |
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Preference number: 4 (lower is better) Translates to: RWGPWRFPSMCGSALLPGLLCHH*LGWVFG Trigger: CCCAAAGACCCAGCCAAGCCAGTGGTGGCACAGAAG...TCCAGGCAGTAATGCTGAGCCACACATGGAAGGGAACCTCCAAGGACCCCATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS-3UTR CCA 90 bp | TTATTGACAGCTTTACCGGATGCTGGACCTGGCTCTCAGCTGCCCAACAGGAGACACCACTGGCTTGGCTaGGTCTTTGGGGAACCATCG | + |
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Preference number: 4 (lower is better) Translates to: LLTALPDAGPGSQLPNRRHHWLG*VFGEPS Trigger: CGATGGTTCCCCAAAGACCCAGCCAAGCCAGTGGTG...TCTCCTGTTGGGCAGCTGAGAGCCAGGTCCAGCATCCGGTAAAGCTGTCAATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS-3UTR CCA 90 bp | CAGCTTTACCGGATGCTGGACCTGGCTCTCAGCTGCCCAACAGGAGAATACAGGGAAAGGCCAGTACGCTaGAAGAAGTGGGAGCCATCA | + |
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Preference number: 4 (lower is better) Translates to: QLYRMLDLALSCPTGEYRERPVR*KKWEPS Trigger: TGATGGCTCCCACTTCTTCCAGCGTACTGGCCTTTC...CCTGTATTCTCCTGTTGGGCAGCTGAGAGCCAGGTCCAGCATCCGGTAAAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS-3UTR GCA 90 bp | TTTACCGGATGCTGGACCTGGCTCTCAGCTGCCCAACAGGAGAATACAGGTTTTGATGGGTGTCTTCTGTaGCACCACTGGCTTGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: FTGCWTWLSAAQQENTGFDGCLL*HHWLGW Trigger: CCAGCCAAGCCAGTGGTGGCACAGAAGACACCCATC...AAAACCTGTATTCTCCTGTTGGGCAGCTGAGAGCCAGGTCCAGCATCCGGTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS-3UTR GCA 90 bp | ATGCTGGACCTGGCTCTCAGCTGCCCAACAGGAGAATACAGGTTTTTCAGGGTAGATGGGTGTCTTCTGTaGCACCACTGGCTTGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: MLDLALSCPTGEYRFFRVDGCLL*HHWLGW Trigger: CCAGCCAAGCCAGTGGTGGCACAGAAGACACCCATC...TACCCTGAAAAACCTGTATTCTCCTGTTGGGCAGCTGAGAGCCAGGTCCAGCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS-3UTR CCA 90 bp | CGGATGCTGGACCTGGCTCTCAGCTGCCCAACAGGAGAATACAGGTTTTTCAGGGAAAGGCCAGTACGCTaGAAGAAGTGGGAGCCATCA | + |
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Preference number: 4 (lower is better) Translates to: RMLDLALSCPTGEYRFFRERPVR*KKWEPS Trigger: TGATGGCTCCCACTTCTTCCAGCGTACTGGCCTTTC...CCTGAAAAACCTGTATTCTCCTGTTGGGCAGCTGAGAGCCAGGTCCAGCATCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS-3UTR GCA 90 bp | CTGGCTCTCAGCTGCCCAACAGGAGAATACAGGTTTTTCAGGGTACAATTGCTAGCCGCTGAGTGGCCTTaGAGGTACATAGGGCCACTG | + |
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Preference number: 4 (lower is better) Translates to: LALSCPTGEYRFFRVQLLAAEWP*RYIGPL Trigger: CAGTGGCCCTATGTACCTGCAAGGCCACTCAGCGGC...TAGCAATTGTACCCTGAAAAACCTGTATTCTCCTGTTGGGCAGCTGAGAGCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS-3UTR GCA 90 bp | GATGGGGTCCTTGGAGGTTCCCTTCCATGTGTGGCTCAGCATTACTGCCTGGAGTGGGGAACCTACTTCTaGTTTCTGTACCTGCTCACT | + |
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Preference number: 4 (lower is better) Translates to: DGVLGGSLPCVAQHYCLEWGTYF*FLYLLT Trigger: AGTGAGCAGGTACAGAAAGCAGAAGTAGGTTCCCCA...CTCCAGGCAGTAATGCTGAGCCACACATGGAAGGGAACCTCCAAGGACCCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS-3UTR CCA 90 bp | CCTGGCTCTCAGCTGCCCAACAGGAGAATACAGGTTTTTCAGGGTACAATTGCTCACCACTGGCTTGGCTaGGTCTTTGGGGAACCATCG | + |
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Preference number: 4 (lower is better) Translates to: PGSQLPNRRIQVFQGTIAHHWLG*VFGEPS Trigger: CGATGGTTCCCCAAAGACCCAGCCAAGCCAGTGGTG...AGCAATTGTACCCTGAAAAACCTGTATTCTCCTGTTGGGCAGCTGAGAGCCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS-3UTR CCA 90 bp | CTAACAAGATGGGGTCCTTGGAGGTTCCCTTCCATGTGTGGCTCAGCATTACTGGTACGCTGGAAGAAGTaGGAGCCATCACAGAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: LTRWGPWRFPSMCGSALLVRWKK*EPSQKG Trigger: GCCCTTCTGTGATGGCTCCCACTTCTTCCAGCGTAC...CAGTAATGCTGAGCCACACATGGAAGGGAACCTCCAAGGACCCCATCTTGTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS-3UTR CCA 90 bp | GGTCCTTGGAGGTTCCCTTCCATGTGTGGCTCAGCATTACTGCCTGGAGTCACAACTGTGCGTGTCTCTTaGGCCTTGAACTTGAGTGGA | + |
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Preference number: 4 (lower is better) Translates to: GPWRFPSMCGSALLPGVTTVRVS*ALNLSG Trigger: TCCACTCAAGTTCAAGGCCCAAGAGACACGCACAGT...TGTGACTCCAGGCAGTAATGCTGAGCCACACATGGAAGGGAACCTCCAAGGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS-3UTR CCA 90 bp | GACAGCTTTACCGGATGCTGGACCTGGCTCTCAGCTGCCCAACAGGAGAATACAACTGTGCGTGTCTCTTaGGCCTTGAACTTGAGTGGA | + |
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Preference number: 4 (lower is better) Translates to: DSFTGCWTWLSAAQQENTTVRVS*ALNLSG Trigger: TCCACTCAAGTTCAAGGCCCAAGAGACACGCACAGT...TGTATTCTCCTGTTGGGCAGCTGAGAGCCAGGTCCAGCATCCGGTAAAGCTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS-3UTR GCA 90 bp | TTACCGGATGCTGGACCTGGCTCTCAGCTGCCCAACAGGAGAATACAGGTTTTTTCTGCTTTCTGTACCTaGTCACTCTTGTGGGTACCG | + |
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Preference number: 4 (lower is better) Translates to: LPDAGPGSQLPNRRIQVFSAFCT*SLLWVP Trigger: CGGTACCCACAAGAGTGAGCAGGTACAGAAAGCAGA...AAAAACCTGTATTCTCCTGTTGGGCAGCTGAGAGCCAGGTCCAGCATCCGGTAA 51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS-3UTR GCA 90 bp | GATGCTGGACCTGGCTCTCAGCTGCCCAACAGGAGAATACAGGTTTTTCAGGGTTGGGGAACCTACTTCTaGTTTCTGTACCTGCTCACT | + |
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Preference number: 4 (lower is better) Translates to: DAGPGSQLPNRRIQVFQGWGTYF*FLYLLT Trigger: AGTGAGCAGGTACAGAAAGCAGAAGTAGGTTCCCCA...ACCCTGAAAAACCTGTATTCTCCTGTTGGGCAGCTGAGAGCCAGGTCCAGCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS-3UTR CCA 90 bp | TACAGGTTTTTCAGGGTACAATTGCTAACAAGATGGGGTCCTTGGAGGTTCCCTCACCACTGGCTTGGCTaGGTCTTTGGGGAACCATCG | + |
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Preference number: 4 (lower is better) Translates to: YRFFRVQLLTRWGPWRFPHHWLG*VFGEPS Trigger: CGATGGTTCCCCAAAGACCCAGCCAAGCCAGTGGTG...AGGGAACCTCCAAGGACCCCATCTTGTTAGCAATTGTACCCTGAAAAACCTGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS-3UTR CCA 90 bp | CCCAACAGGAGAATACAGGTTTTTCAGGGTACAATTGCTAACAAGATGGGGTCCCTTCTGTGCCACCACTaGCTTGGCTGGGTCTTTGGG | + |
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Preference number: 4 (lower is better) Translates to: PNRRIQVFQGTIANKMGSLLCHH*LGWVFG Trigger: CCCAAAGACCCAGCCAAGCCAGTGGTGGCACAGAAG...GGACCCCATCTTGTTAGCAATTGTACCCTGAAAAACCTGTATTCTCCTGTTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS-3UTR GCA 90 bp | AGGGTACAATTGCTAACAAGATGGGGTCCTTGGAGGTTCCCTTCCATGTGTGGCTGGGGAACCTACTTCTaGTTTCTGTACCTGCTCACT | + |
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Preference number: 4 (lower is better) Translates to: RVQLLTRWGPWRFPSMCGWGTYF*FLYLLT Trigger: AGTGAGCAGGTACAGAAAGCAGAAGTAGGTTCCCCA...GCCACACATGGAAGGGAACCTCCAAGGACCCCATCTTGTTAGCAATTGTACCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS-3UTR CCA 90 bp | TACAGGTTTTTCAGGGTACAATTGCTAACAAGATGGGGTCCTTGGAGGTTCCCTGTACGCTGGAAGAAGTaGGAGCCATCACAGAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: YRFFRVQLLTRWGPWRFPVRWKK*EPSQKG Trigger: GCCCTTCTGTGATGGCTCCCACTTCTTCCAGCGTAC...AGGGAACCTCCAAGGACCCCATCTTGTTAGCAATTGTACCCTGAAAAACCTGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS-3UTR GCA 90 bp | AACAGGAGAATACAGGTTTTTCAGGGTACAATTGCTAACAAGATGGGGTCCTTGGATGGGTGTCTTCTGTaGCACCACTGGCTTGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: NRRIQVFQGTIANKMGSLDGCLL*HHWLGW Trigger: CCAGCCAAGCCAGTGGTGGCACAGAAGACACCCATC...CAAGGACCCCATCTTGTTAGCAATTGTACCCTGAAAAACCTGTATTCTCCTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS-3UTR CCA 90 bp | GAATACAGGTTTTTCAGGGTACAATTGCTAACAAGATGGGGTCCTTGGAGGTTCGTACGCTGGAAGAAGTaGGAGCCATCACAGAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: EYRFFRVQLLTRWGPWRFVRWKK*EPSQKG Trigger: GCCCTTCTGTGATGGCTCCCACTTCTTCCAGCGTAC...GAACCTCCAAGGACCCCATCTTGTTAGCAATTGTACCCTGAAAAACCTGTATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| 3UTR CAA 72 bp | TGCCCAACAGGAGAATACAGGTTTTTCAGGGTACAATaGCTAACAAGATGGGGTCCTTGGAGGTTCCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: CPTGEYRFFRVQ*LTRWGPWRFPS Trigger: GGAAGGGAACCTCCAAGGACCCCATCTTGTTAGCAATTGTACCCTGAAAAACCTGTATTCTCCTGTTGGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS-3UTR TCA 90 bp | AGCTGCCCAACAGGAGAATACAGGTTTTTCAGGGTACAATTGCTAACAAGATGGCCATCACAGAAGGGCTaGTTCTTGCTTCGGCCACAT | + |
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Preference number: 4 (lower is better) Translates to: SCPTGEYRFFRVQLLTRWPSQKG*FLLRPH Trigger: ATGTGGCCGAAGCAAGAATCAGCCCTTCTGTGATGG...CCATCTTGTTAGCAATTGTACCCTGAAAAACCTGTATTCTCCTGTTGGGCAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS-3UTR TCA 90 bp | CAGCTGCCCAACAGGAGAATACAGGTTTTTCAGGGTACAATTGCTAACAAGATGCCATCACAGAAGGGCTaGTTCTTGCTTCGGCCACAT | + |
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Preference number: 4 (lower is better) Translates to: QLPNRRIQVFQGTIANKMPSQKG*FLLRPH Trigger: ATGTGGCCGAAGCAAGAATCAGCCCTTCTGTGATGG...CATCTTGTTAGCAATTGTACCCTGAAAAACCTGTATTCTCCTGTTGGGCAGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS-3UTR TCA 90 bp | ACAGGAGAATACAGGTTTTTCAGGGTACAATTGCTAACAAGATGGGGTCCTTGGCCATCACAGAAGGGCTaGTTCTTGCTTCGGCCACAT | + |
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Preference number: 4 (lower is better) Translates to: TGEYRFFRVQLLTRWGPWPSQKG*FLLRPH Trigger: ATGTGGCCGAAGCAAGAATCAGCCCTTCTGTGATGG...CCAAGGACCCCATCTTGTTAGCAATTGTACCCTGAAAAACCTGTATTCTCCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS-3UTR GCA 90 bp | TGCCCAACAGGAGAATACAGGTTTTTCAGGGTACAATTGCTAACAAGATGGGGTTCTGCTTTCTGTACCTaGTCACTCTTGTGGGTACCG | + |
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Preference number: 4 (lower is better) Translates to: CPTGEYRFFRVQLLTRWGSAFCT*SLLWVP Trigger: CGGTACCCACAAGAGTGAGCAGGTACAGAAAGCAGA...ACCCCATCTTGTTAGCAATTGTACCCTGAAAAACCTGTATTCTCCTGTTGGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS-3UTR GCA 90 bp | CAGCTGCCCAACAGGAGAATACAGGTTTTTCAGGGTACAATTGCTAACAAGATGTCTGCTTTCTGTACCTaGTCACTCTTGTGGGTACCG | + |
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Preference number: 4 (lower is better) Translates to: QLPNRRIQVFQGTIANKMSAFCT*SLLWVP Trigger: CGGTACCCACAAGAGTGAGCAGGTACAGAAAGCAGA...CATCTTGTTAGCAATTGTACCCTGAAAAACCTGTATTCTCCTGTTGGGCAGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS-3UTR CCA 90 bp | AGAATACAGGTTTTTCAGGGTACAATTGCTAACAAGATGGGGTCCTTGGAGGTTGAAAGGCCAGTACGCTaGAAGAAGTGGGAGCCATCA | + |
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Preference number: 4 (lower is better) Translates to: RIQVFQGTIANKMGSLEVERPVR*KKWEPS Trigger: TGATGGCTCCCACTTCTTCCAGCGTACTGGCCTTTC...AACCTCCAAGGACCCCATCTTGTTAGCAATTGTACCCTGAAAAACCTGTATTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| 3UTR CAA 72 bp | GTTTTTCAGGGTACAATTGCTAACAAGATGGGGTCCTaGGAGGTTCCCTTCCATGTGTGGCTCAGCATTACT | + |
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Preference number: 4 (lower is better) Translates to: VFQGTIANKMGS*EVPFHVWLSIT Trigger: AGTAATGCTGAGCCACACATGGAAGGGAACCTCCAAGGACCCCATCTTGTTAGCAATTGTACCCTGAAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS-3UTR CCA 90 bp | AGAATACAGGTTTTTCAGGGTACAATTGCTAACAAGATGGGGTCCTTGGAGGTTACTGTGCGTGTCTCTTaGGCCTTGAACTTGAGTGGA | + |
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Preference number: 4 (lower is better) Translates to: RIQVFQGTIANKMGSLEVTVRVS*ALNLSG Trigger: TCCACTCAAGTTCAAGGCCCAAGAGACACGCACAGT...AACCTCCAAGGACCCCATCTTGTTAGCAATTGTACCCTGAAAAACCTGTATTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS CCA 90 bp | CCTGCTCACTCTTGTGGGTACCGTCACAGTAAGGGGGCCGCTGAGTaGCCTTGCAGGTACATAGGGCCACTGTGCGTGTCTCTTGGGCCT | + |
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Preference number: 5 (lower is better) Translates to: PAHSCGYRHSKGAAE*PCRYIGPLCVSLGP Trigger: AGGCCCAAGAGACACGCACAGTGGCCCTATGTACCTGCAAGGCCACTCAGCGGCCCCCTTACTGTGACGGTACCCACAAGAGTGAGCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS GCA 90 bp | GTAGGTTTTCCCGGCAACCAGCTCCAATCTGATGGGTGTCTTCTGTaGCACCACTGGCTTGGCTGGGTCTTTGGGGAACCATCGGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: VGFPGNQLQSDGCLL*HHWLGWVFGEPSGQ Trigger: CTGGCCCGATGGTTCCCCAAAGACCCAGCCAAGCCAGTGGTGGCACAGAAGACACCCATCAGATTGGAGCTGGTTGCCGGGAAAACCTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS TCA 90 bp | CACATACACACCACCTGTAGGTTTTCCCGGCAACCAGCTCCAATCTaGTGGGTGTCTTCTGTGCCACCACTGGCTTGGCTGGGTCTTTGG | + |
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Preference number: 5 (lower is better) Translates to: HIHTTCRFSRQPAPI*WVSSVPPLAWLGLW Trigger: CCAAAGACCCAGCCAAGCCAGTGGTGGCACAGAAGACACCCATCAGATTGGAGCTGGTTGCCGGGAAAACCTACAGGTGGTGTGTATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS-3UTR CAA 90 bp | TTACCGGATGCTGGACCTGGCTCTCAGCTGCCCAACAGGAGAATACAGGTTTTTTGTGCCACCACTGGCTaGGCTGGGTCTTTGGGGAAC | + |
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Preference number: 5 (lower is better) Translates to: LPDAGPGSQLPNRRIQVFCATTG*AGSLGN Trigger: GTTCCCCAAAGACCCAGCCAAGCCAGTGGTGGCACA...AAAAACCTGTATTCTCCTGTTGGGCAGCTGAGAGCCAGGTCCAGCATCCGGTAA 56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS-3UTR CAA 90 bp | GTCCTTGGAGGTTCCCTTCCATGTGTGGCTCAGCATTACTGCCTGGAGTCACAGCGTGTCTCTTGGGCCTaGAACTTGAGTGGAGAAAGG | + |
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Preference number: 5 (lower is better) Translates to: VLGGSLPCVAQHYCLESQRVSWA*NLSGER Trigger: CCTTTCTCCACTCAAGTTCAAGGCCCAAGAGACACG...CTGTGACTCCAGGCAGTAATGCTGAGCCACACATGGAAGGGAACCTCCAAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS-3UTR CAA 90 bp | GTGTTTATTGACAGCTTTACCGGATGCTGGACCTGGCTCTCAGCTGCCCAACAGCACTGTGCGTGTCTCTaGGGCCTTGAACTTGAGTGG | + |
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Preference number: 5 (lower is better) Translates to: VFIDSFTGCWTWLSAAQQHCACL*GLELEW Trigger: CCACTCAAGTTCAAGGCCCAAGAGACACGCACAGTG...CTGTTGGGCAGCTGAGAGCCAGGTCCAGCATCCGGTAAAGCTGTCAATAAACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS-3UTR CAA 90 bp | CTGGCTCTCAGCTGCCCAACAGGAGAATACAGGTTTTTCAGGGTACAATTGCTATGTGCCACCACTGGCTaGGCTGGGTCTTTGGGGAAC | + |
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Preference number: 5 (lower is better) Translates to: LALSCPTGEYRFFRVQLLCATTG*AGSLGN Trigger: GTTCCCCAAAGACCCAGCCAAGCCAGTGGTGGCACA...TAGCAATTGTACCCTGAAAAACCTGTATTCTCCTGTTGGGCAGCTGAGAGCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS-3UTR CAA 90 bp | GACCTGGCTCTCAGCTGCCCAACAGGAGAATACAGGTTTTTCAGGGTACAATTGCACTGTGCGTGTCTCTaGGGCCTTGAACTTGAGTGG | + |
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Preference number: 5 (lower is better) Translates to: DLALSCPTGEYRFFRVQLHCACL*GLELEW Trigger: CCACTCAAGTTCAAGGCCCAAGAGACACGCACAGTG...CAATTGTACCCTGAAAAACCTGTATTCTCCTGTTGGGCAGCTGAGAGCCAGGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS-3UTR CAA 90 bp | AACAGGAGAATACAGGTTTTTCAGGGTACAATTGCTAACAAGATGGGGTCCTTGTGTGCCACCACTGGCTaGGCTGGGTCTTTGGGGAAC | + |
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Preference number: 5 (lower is better) Translates to: NRRIQVFQGTIANKMGSLCATTG*AGSLGN Trigger: GTTCCCCAAAGACCCAGCCAAGCCAGTGGTGGCACA...CAAGGACCCCATCTTGTTAGCAATTGTACCCTGAAAAACCTGTATTCTCCTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS-3UTR CAA 90 bp | AGCTGCCCAACAGGAGAATACAGGTTTTTCAGGGTACAATTGCTAACAAGATGGCACTGTGCGTGTCTCTaGGGCCTTGAACTTGAGTGG | + |
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Preference number: 5 (lower is better) Translates to: SCPTGEYRFFRVQLLTRWHCACL*GLELEW Trigger: CCACTCAAGTTCAAGGCCCAAGAGACACGCACAGTG...CCATCTTGTTAGCAATTGTACCCTGAAAAACCTGTATTCTCCTGTTGGGCAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS-3UTR CAA 90 bp | AGAATACAGGTTTTTCAGGGTACAATTGCTAACAAGATGGGGTCCTTGGAGGTTCGTGTCTCTTGGGCCTaGAACTTGAGTGGAGAAAGG | + |
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Preference number: 5 (lower is better) Translates to: RIQVFQGTIANKMGSLEVRVSWA*NLSGER Trigger: CCTTTCTCCACTCAAGTTCAAGGCCCAAGAGACACG...AACCTCCAAGGACCCCATCTTGTTAGCAATTGTACCCTGAAAAACCTGTATTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS GCA 72 bp | GGGTACCGTCACAGTAAGGGGGCCGCTGAGTGGCCTTaGAGGTACATAGGGCCACTGTGCGTGTCTCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: GYRHSKGAAEWP*RYIGPLCVSLG Trigger: CCCAAGAGACACGCACAGTGGCCCTATGTACCTGCAAGGCCACTCAGCGGCCCCCTTACTGTGACGGTACCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS GCA 72 bp | CCCGGCAACCAGCTCCAATCTGATGGGTGTCTTCTGTaGCACCACTGGCTTGGCTGGGTCTTTGGGGAACCA | + |
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Preference number: 6 (lower is better) Translates to: PGNQLQSDGCLL*HHWLGWVFGEP Trigger: TGGTTCCCCAAAGACCCAGCCAAGCCAGTGGTGGCACAGAAGACACCCATCAGATTGGAGCTGGTTGCCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS CCA 72 bp | CAGCTCCAATCTGATGGGTGTCTTCTGTGCCACCACTaGCTTGGCTGGGTCTTTGGGGAACCATCGGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: QLQSDGCLLCHH*LGWVFGEPSGQ Trigger: CTGGCCCGATGGTTCCCCAAAGACCCAGCCAAGCCAGTGGTGGCACAGAAGACACCCATCAGATTGGAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS CAA 90 bp | GTGGCCTTGCAGGTACATAGGGCCACTGTGCGTGTCTCTTGGGCCTaGAACTTGAGTGGAGAAAGGCCAGTACGCTGGAAGAAGTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: VALQVHRATVRVSWA*NLSGERPVRWKKWE Trigger: CTCCCACTTCTTCCAGCGTACTGGCCTTTCTCCACTCAAGTTCAAGGCCCAAGAGACACGCACAGTGGCCCTATGTACCTGCAAGGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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| CDS TCA 72 bp | ACCACCTGTAGGTTTTCCCGGCAACCAGCTCCAATCTaGTGGGTGTCTTCTGTGCCACCACTGGCTTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: TTCRFSRQPAPI*WVSSVPPLAWL Trigger: CAGCCAAGCCAGTGGTGGCACAGAAGACACCCATCAGATTGGAGCTGGTTGCCGGGAAAACCTACAGGTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107583.3 ENSMUST00000107584.8 ENSMUST00000107585.9 |
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