Pregenerated sensors for CIDEC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030278Ensembl transcript IDs: ENSMUST00000032416.11, ENSMUST00000113089.8, ENSMUST00000113091.8, ENSMUST00000133348.2
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCCAGGGCTCCAGCCCTTCCTGCAATTTCCTTGGTGCTGTGCTGTaGGGGAGGCGCAGGCAGGTGAGAAGCTGTCTGGCTGCCAGGCTC | + |
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Preference number: 1 (lower is better) Translates to: PQGSSPSCNFLGAVL*GRRRQVRSCLAARL Trigger: GAGCCTGGCAGCCAGACAGCTTCTCACCTGCCTGCGCCTCCCTCACAGCACAGCACCAAGGAAATTGCAGGAAGGGCTGGAGCCCTGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| 3UTR GCA 90 bp | GACCAGCCCACCCCAGGGCTCCAGCCCTTCCTGCAATTTCCTTGGTaGTGTGCTGTGAGGGAGGCGCAGGCAGGTGAGAAGCTGTCTGGC | + |
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Preference number: 1 (lower is better) Translates to: DQPTPGLQPFLQFPW*CAVREAQAGEKLSG Trigger: GCCAGACAGCTTCTCACCTGCCTGCGCCTCCCTCACAGCACAGCACCAAGGAAATTGCAGGAAGGGCTGGAGCCCTGGGGTGGGCTGGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| 3UTR CCA 90 bp | AATGTCTACTGCATGATGAGTGTGGGCAGCCAGGACCGGGGATGGTaGGGTGCACCAGAGAGGGAGTGGCACGGAAGACGGCACAAGTGG | + |
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Preference number: 1 (lower is better) Translates to: NVYCMMSVGSQDRGW*GAPEREWHGRRHKW Trigger: CCACTTGTGCCGTCTTCCGTGCCACTCCCTCTCTGGTGCACCCCACCATCCCCGGTCCTGGCTGCCCACACTCATCATGCAGTAGACATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| 3UTR CCA 90 bp | TGGTGGGGTGCACCAGAGAGGGAGTGGCACGGAAGACGGCACAAGTaGACACAGGGGCAGACTTTGTGCCTGCCAGGGCTAAGTGTTAGT | + |
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Preference number: 1 (lower is better) Translates to: WWGAPEREWHGRRHK*TQGQTLCLPGLSVS Trigger: ACTAACACTTAGCCCTGGCAGGCACAAAGTCTGCCCCTGTGTCCACTTGTGCCGTCTTCCGTGCCACTCCCTCTCTGGTGCACCCCACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| 3UTR TCA 90 bp | CATAGACATAGTTGGTGCTGTGGCATGCTGCTCGCTTGGTTGTCTTaGTTCAGGCCAAGGTATGATGGGGGCCACCATAATAATGTCTAC | + |
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Preference number: 1 (lower is better) Translates to: HRHSWCCGMLLAWLS*FRPRYDGGHHNNVY Trigger: GTAGACATTATTATGGTGGCCCCCATCATACCTTGGCCTGAATCAAGACAACCAAGCGAGCAGCATGCCACAGCACCAACTATGTCTATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| 3UTR GCA 90 bp | CATTCACTCATTCGTGGAAAAATGAGAACAAGAGAGGCAGCTGCATaGCTTTCCCAGGAGAACAGGAACTGTGTCCATTCAGGCAATGAG | + |
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Preference number: 1 (lower is better) Translates to: HSLIRGKMRTREAAA*LSQENRNCVHSGNE Trigger: CTCATTGCCTGAATGGACACAGTTCCTGTTCTCCTGGGAAAGGCATGCAGCTGCCTCTCTTGTTCTCATTTTTCCACGAATGAGTGAATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| 3UTR GCA 90 bp | ATACCATTCACTCATTCGTGGAAAAATGAGAACAAGAGAGGCAGCTaGATGCCTTTCCCAGGAGAACAGGAACTGTGTCCATTCAGGCAA | + |
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Preference number: 1 (lower is better) Translates to: IPFTHSWKNENKRGS*MPFPGEQELCPFRQ Trigger: TTGCCTGAATGGACACAGTTCCTGTTCTCCTGGGAAAGGCATGCAGCTGCCTCTCTTGTTCTCATTTTTCCACGAATGAGTGAATGGTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| 3UTR CCA 90 bp | AGCATAAATAGTTTACTGCAGACTCTAATACCATTCACTCATTCGTaGAAAAATGAGAACAAGAGAGGCAGCTGCATGCCTTTCCCAGGA | + |
|
Preference number: 1 (lower is better) Translates to: SINSLLQTLIPFTHS*KNENKRGSCMPFPG Trigger: TCCTGGGAAAGGCATGCAGCTGCCTCTCTTGTTCTCATTTTTCCACGAATGAGTGAATGGTATTAGAGTCTGCAGTAAACTATTTATGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| 3UTR-3UTR TCA 90 bp | AATAATGTCTACTGCATGATGAGTGTGGGCAGCCAGGACCGGGGATGGTGGGGTCTTGGTGCTGTGCTGTaGGGGAGGCGCAGGCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: NNVYCMMSVGSQDRGWWGLGAVL*GRRRQV Trigger: CACCTGCCTGCGCCTCCCTCACAGCACAGCACCAAG...ACCCCACCATCCCCGGTCCTGGCTGCCCACACTCATCATGCAGTAGACATTATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| 3UTR-3UTR GCA 90 bp | CACGGAAGACGGCACAAGTGGACACAGGGGCAGACTTTGTGCCTGCCAGGGCTAGGCTCCAGCCCTTCCTaGAATTTCCTTGGTGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: HGRRHKWTQGQTLCLPGLGSSPS*NFLGAV Trigger: CACAGCACCAAGGAAATTGCAGGAAGGGCTGGAGCC...TAGCCCTGGCAGGCACAAAGTCTGCCCCTGTGTCCACTTGTGCCGTCTTCCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| 3UTR-3UTR TCA 90 bp | CTTACAGGAGGGGCCTGGGTGACTCAGAATCATCTGCATTCCCTAAGGTCCCTCGGGGCTAGGAGGGAGTaGTCAGAGTCCCAGGTGAGA | + |
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Preference number: 2 (lower is better) Translates to: LTGGAWVTQNHLHSLRSLGARRE*SESQVR Trigger: TCTCACCTGGGACTCTGATCACTCCCTCCTAGCCCC...GAGGGACCTTAGGGAATGCAGATGATTCTGAGTCACCCAGGCCCCTCCTGTAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| 3UTR-3UTR GCA 90 bp | GACATAGTTGGTGCTGTGGCATGCTGCTCGCTTGGTTGTCTTGATTCAGGCCAACCGGGGATGGTGGGGTaGACCAGAGAGGGAGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: DIVGAVACCSLGCLDSGQPGMVG*TREGVA Trigger: TGCCACTCCCTCTCTGGTGCACCCCACCATCCCCGG...TTGGCCTGAATCAAGACAACCAAGCGAGCAGCATGCCACAGCACCAACTATGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| 3UTR-3UTR CCA 90 bp | GACATAGTTGGTGCTGTGGCATGCTGCTCGCTTGGTTGTCTTGATTCAGGCCAAAGCCAGGACCGGGGATaGTGGGGTGCACCAGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: DIVGAVACCSLGCLDSGQSQDRG*WGAPER Trigger: CCTCTCTGGTGCACCCCACCATCCCCGGTCCTGGCT...TTGGCCTGAATCAAGACAACCAAGCGAGCAGCATGCCACAGCACCAACTATGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| 3UTR CAA 90 bp | AGGGAGTGGCACGGAAGACGGCACAAGTGGACACAGGGGCAGACTTaGTGCCTGCCAGGGCTAAGTGTTAGTCCTCTAAGCTACCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: REWHGRRHKWTQGQT*CLPGLSVSPLSYLR Trigger: TCTCAGGTAGCTTAGAGGACTAACACTTAGCCCTGGCAGGCACAAAGTCTGCCCCTGTGTCCACTTGTGCCGTCTTCCGTGCCACTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| 3UTR-3UTR GCA 90 bp | GATGGGGGCCACCATAATAATGTCTACTGCATGATGAGTGTGGGCAGCCAGGACATTTCCTTGGTGCTGTaGTGTGAGGGAGGCGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: DGGHHNNVYCMMSVGSQDISLVL*CEGGAG Trigger: GCCTGCGCCTCCCTCACAGCACAGCACCAAGGAAAT...GTCCTGGCTGCCCACACTCATCATGCAGTAGACATTATTATGGTGGCCCCCATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| 3UTR-3UTR CCA 90 bp | CTTACAGGAGGGGCCTGGGTGACTCAGAATCATCTGCATTCCCTAAGGTCCCTCGGAAGACGGCACAAGTaGACACAGGGGCAGACTTTG | + |
|
Preference number: 2 (lower is better) Translates to: LTGGAWVTQNHLHSLRSLGRRHK*TQGQTL Trigger: CAAAGTCTGCCCCTGTGTCCACTTGTGCCGTCTTCC...GAGGGACCTTAGGGAATGCAGATGATTCTGAGTCACCCAGGCCCCTCCTGTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| 3UTR-3UTR TCA 90 bp | TTCAGGCCAAGGTATGATGGGGGCCACCATAATAATGTCTACTGCATGATGAGTCTTGGTGCTGTGCTGTaGGGGAGGCGCAGGCAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: FRPRYDGGHHNNVYCMMSLGAVL*GRRRQV Trigger: CACCTGCCTGCGCCTCCCTCACAGCACAGCACCAAG...ACTCATCATGCAGTAGACATTATTATGGTGGCCCCCATCATACCTTGGCCTGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| 3UTR-3UTR CCA 90 bp | ACCATGGTCATAGACATAGTTGGTGCTGTGGCATGCTGCTCGCTTGGTTGTCTTGCACCAGAGAGGGAGTaGCACGGAAGACGGCACAAG | + |
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Preference number: 2 (lower is better) Translates to: TMVIDIVGAVACCSLGCLAPERE*HGRRHK Trigger: CTTGTGCCGTCTTCCGTGCCACTCCCTCTCTGGTGC...AAGACAACCAAGCGAGCAGCATGCCACAGCACCAACTATGTCTATGACCATGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| 3UTR-3UTR GCA 90 bp | CCAAGGTATGATGGGGGCCACCATAATAATGTCTACTGCATGATGAGTGTGGGCATTTCCTTGGTGCTGTaGTGTGAGGGAGGCGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: PRYDGGHHNNVYCMMSVGISLVL*CEGGAG Trigger: GCCTGCGCCTCCCTCACAGCACAGCACCAAGGAAAT...GCCCACACTCATCATGCAGTAGACATTATTATGGTGGCCCCCATCATACCTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| 3UTR-3UTR CCA 90 bp | CTTACAGGAGGGGCCTGGGTGACTCAGAATCATCTGCATTCCCTAAGGTCCCTCTTCCTGCAATTTCCTTaGTGCTGTGCTGTGAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: LTGGAWVTQNHLHSLRSLFLQFP*CCAVRE Trigger: CTCCCTCACAGCACAGCACCAAGGAAATTGCAGGAA...GAGGGACCTTAGGGAATGCAGATGATTCTGAGTCACCCAGGCCCCTCCTGTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| 3UTR-3UTR CCA 90 bp | AAGAGAGGCAGCTGCATGCCTTTCCCAGGAGAACAGGAACTGTGTCCATTCAGGCAGAAAGGAAGGAACTaGGCCAGGCTAGGAAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: KRGSCMPFPGEQELCPFRQKGRN*ARLGSP Trigger: AGGACTTCCTAGCCTGGCCCAGTTCCTTCCTTTCTG...CCTGAATGGACACAGTTCCTGTTCTCCTGGGAAAGGCATGCAGCTGCCTCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| 3UTR-3UTR CCA 90 bp | GACATAGTTGGTGCTGTGGCATGCTGCTCGCTTGGTTGTCTTGATTCAGGCCAAGGAAGACGGCACAAGTaGACACAGGGGCAGACTTTG | + |
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Preference number: 2 (lower is better) Translates to: DIVGAVACCSLGCLDSGQGRRHK*TQGQTL Trigger: CAAAGTCTGCCCCTGTGTCCACTTGTGCCGTCTTCC...TTGGCCTGAATCAAGACAACCAAGCGAGCAGCATGCCACAGCACCAACTATGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| 3UTR-3UTR GCA 90 bp | CCAAGGTATGATGGGGGCCACCATAATAATGTCTACTGCATGATGAGTGTGGGCCTGCAATTTCCTTGGTaGTGTGCTGTGAGGGAGGCG | + |
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Preference number: 2 (lower is better) Translates to: PRYDGGHHNNVYCMMSVGLQFPW*CAVREA Trigger: CGCCTCCCTCACAGCACAGCACCAAGGAAATTGCAG...GCCCACACTCATCATGCAGTAGACATTATTATGGTGGCCCCCATCATACCTTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| 3UTR-3UTR GCA 90 bp | ACCATGGTCATAGACATAGTTGGTGCTGTGGCATGCTGCTCGCTTGGTTGTCTTCTGCAATTTCCTTGGTaGTGTGCTGTGAGGGAGGCG | + |
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Preference number: 2 (lower is better) Translates to: TMVIDIVGAVACCSLGCLLQFPW*CAVREA Trigger: CGCCTCCCTCACAGCACAGCACCAAGGAAATTGCAG...AAGACAACCAAGCGAGCAGCATGCCACAGCACCAACTATGTCTATGACCATGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| 3UTR-3UTR GCA 90 bp | CTTACAGGAGGGGCCTGGGTGACTCAGAATCATCTGCATTCCCTAAGGTCCCTCCATAATAATGTCTACTaGATGATGAGTGTGGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: LTGGAWVTQNHLHSLRSLHNNVY*MMSVGS Trigger: GCTGCCCACACTCATCATGCAGTAGACATTATTATG...GAGGGACCTTAGGGAATGCAGATGATTCTGAGTCACCCAGGCCCCTCCTGTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| 3UTR-3UTR GCA 90 bp | GACATAGTTGGTGCTGTGGCATGCTGCTCGCTTGGTTGTCTTGATTCAGGCCAACATAATAATGTCTACTaGATGATGAGTGTGGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: DIVGAVACCSLGCLDSGQHNNVY*MMSVGS Trigger: GCTGCCCACACTCATCATGCAGTAGACATTATTATG...TTGGCCTGAATCAAGACAACCAAGCGAGCAGCATGCCACAGCACCAACTATGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| 3UTR-3UTR CCA 90 bp | GGTATCAGCATAAATAGTTTACTGCAGACTCTAATACCATTCACTCATTCGTGGATGATCATGTGCAGCTaGGGGCTAGGAGGGAGTGAT | + |
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Preference number: 2 (lower is better) Translates to: GISINSLLQTLIPFTHSWMIMCS*GLGGSD Trigger: ATCACTCCCTCCTAGCCCCCAGCTGCACATGATCAT...CCACGAATGAGTGAATGGTATTAGAGTCTGCAGTAAACTATTTATGCTGATACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| 3UTR CCA 72 bp | TGCATGATGAGTGTGGGCAGCCAGGACCGGGGATGGTaGGGTGCACCAGAGAGGGAGTGGCACGGAAGACGG | + |
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Preference number: 3 (lower is better) Translates to: CMMSVGSQDRGW*GAPEREWHGRR Trigger: CCGTCTTCCGTGCCACTCCCTCTCTGGTGCACCCCACCATCCCCGGTCCTGGCTGCCCACACTCATCATGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| 3UTR TCA 72 bp | TCCTTGGTGCTGTGCTGTGAGGGAGGCGCAGGCAGGTaGGAAGCTGTCTGGCTGCCAGGCTCATGGGTGCTG | + |
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Preference number: 3 (lower is better) Translates to: SLVLCCEGGAGR*EAVWLPGSWVL Trigger: CAGCACCCATGAGCCTGGCAGCCAGACAGCTTCTCACCTGCCTGCGCCTCCCTCACAGCACAGCACCAAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| 3UTR TCA 72 bp | TCCAGCCCTTCCTGCAATTTCCTTGGTGCTGTGCTGTaGGGGAGGCGCAGGCAGGTGAGAAGCTGTCTGGCT | + |
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Preference number: 3 (lower is better) Translates to: SSPSCNFLGAVL*GRRRQVRSCLA Trigger: AGCCAGACAGCTTCTCACCTGCCTGCGCCTCCCTCACAGCACAGCACCAAGGAAATTGCAGGAAGGGCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| 3UTR-3UTR CAA 90 bp | CGGAAGACGGCACAAGTGGACACAGGGGCAGACTTTGTGCCTGCCAGGGCTAAGCTTCCTGCAATTTCCTaGGTGCTGTGCTGTGAGGGA | + |
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Preference number: 3 (lower is better) Translates to: RKTAQVDTGADFVPARAKLPAIS*VLCCEG Trigger: TCCCTCACAGCACAGCACCAAGGAAATTGCAGGAAG...CTTAGCCCTGGCAGGCACAAAGTCTGCCCCTGTGTCCACTTGTGCCGTCTTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| 3UTR-3UTR CAA 90 bp | AAGAGAGGCAGCTGCATGCCTTTCCCAGGAGAACAGGAACTGTGTCCATTCAGGACACAGGGGCAGACTTaGTGCCTGCCAGGGCTAAGT | + |
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Preference number: 3 (lower is better) Translates to: KRGSCMPFPGEQELCPFRTQGQT*CLPGLS Trigger: ACTTAGCCCTGGCAGGCACAAAGTCTGCCCCTGTGT...CCTGAATGGACACAGTTCCTGTTCTCCTGGGAAAGGCATGCAGCTGCCTCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| 3UTR GCA 72 bp | CCAAGGTATGATGGGGGCCACCATAATAATGTCTACTaGATGATGAGTGTGGGCAGCCAGGACCGGGGATGG | + |
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Preference number: 3 (lower is better) Translates to: PRYDGGHHNNVY*MMSVGSQDRGW Trigger: CCATCCCCGGTCCTGGCTGCCCACACTCATCATGCAGTAGACATTATTATGGTGGCCCCCATCATACCTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| 3UTR TCA 72 bp | GCCGCGGTTTCACCCAAGTCCAGCTTGGTGAATCTATaGGCTTTTAGGTTACTTACAGGAGGGGCCTGGGTG | + |
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Preference number: 3 (lower is better) Translates to: AAVSPKSSLVNL*AFRLLTGGAWV Trigger: CACCCAGGCCCCTCCTGTAAGTAACCTAAAAGCTCATAGATTCACCAAGCTGGACTTGGGTGAAACCGCGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| 3UTR-3UTR CAA 90 bp | AAGAGAGGCAGCTGCATGCCTTTCCCAGGAGAACAGGAACTGTGTCCATTCAGGCTTCCTGCAATTTCCTaGGTGCTGTGCTGTGAGGGA | + |
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Preference number: 3 (lower is better) Translates to: KRGSCMPFPGEQELCPFRLPAIS*VLCCEG Trigger: TCCCTCACAGCACAGCACCAAGGAAATTGCAGGAAG...CCTGAATGGACACAGTTCCTGTTCTCCTGGGAAAGGCATGCAGCTGCCTCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| 3UTR-3UTR CAA 90 bp | TTCAGGCCAAGGTATGATGGGGGCCACCATAATAATGTCTACTGCATGATGAGTACACAGGGGCAGACTTaGTGCCTGCCAGGGCTAAGT | + |
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Preference number: 3 (lower is better) Translates to: FRPRYDGGHHNNVYCMMSTQGQT*CLPGLS Trigger: ACTTAGCCCTGGCAGGCACAAAGTCTGCCCCTGTGT...ACTCATCATGCAGTAGACATTATTATGGTGGCCCCCATCATACCTTGGCCTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| 3UTR GCA 72 bp | ACCATGGTCATAGACATAGTTGGTGCTGTGGCATGCTaGTCGCTTGGTTGTCTTGATTCAGGCCAAGGTATG | + |
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Preference number: 3 (lower is better) Translates to: TMVIDIVGAVAC*SLGCLDSGQGM Trigger: CATACCTTGGCCTGAATCAAGACAACCAAGCGAGCAGCATGCCACAGCACCAACTATGTCTATGACCATGGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| 3UTR CCA 72 bp | AGTTTACTGCAGACTCTAATACCATTCACTCATTCGTaGAAAAATGAGAACAAGAGAGGCAGCTGCATGCCT | + |
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Preference number: 3 (lower is better) Translates to: SLLQTLIPFTHS*KNENKRGSCMP Trigger: AGGCATGCAGCTGCCTCTCTTGTTCTCATTTTTCCACGAATGAGTGAATGGTATTAGAGTCTGCAGTAAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| CDS-3UTR TCA 90 bp | CTGCAATTTCCTTGGTGCTGTGCTGTGAGGGAGGCGCAGGCAGGTGAGAAGCTGCGGTGGCCTGCATGCTaGAGAGGGTCCAGCGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: LQFPWCCAVREAQAGEKLRWPAC*RGSSGA Trigger: TGCTCCGCTGGACCCTCTTCAGCATGCAGGCCACCG...CAGCTTCTCACCTGCCTGCGCCTCCCTCACAGCACAGCACCAAGGAAATTGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| CDS-3UTR GCA 90 bp | CGGAAGACGGCACAAGTGGACACAGGGGCAGACTTTGTGCCTGCCAGGGCTAAGGTGCTCACTGCCACATaGCTGGACAGCGACCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: RKTAQVDTGADFVPARAKVLTAT*LDSDLG Trigger: CCCCAGGTCGCTGTCCAGGCATGTGGCAGTGAGCAC...CTTAGCCCTGGCAGGCACAAAGTCTGCCCCTGTGTCCACTTGTGCCGTCTTCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| CDS-3UTR GCA 90 bp | CACGGAAGACGGCACAAGTGGACACAGGGGCAGACTTTGTGCCTGCCAGGGCTAGGGTCACCACTGCCGTaGTCACTGCCACATGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: HGRRHKWTQGQTLCLPGLGSPLP*SLPHAW Trigger: CCAGGCATGTGGCAGTGAGCACGGCAGTGGTGACCC...TAGCCCTGGCAGGCACAAAGTCTGCCCCTGTGTCCACTTGTGCCGTCTTCCGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| CDS-3UTR TCA 90 bp | AATAATGTCTACTGCATGATGAGTGTGGGCAGCCAGGACCGGGGATGGTGGGGTCGGTGGCCTGCATGCTaGAGAGGGTCCAGCGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: NNVYCMMSVGSQDRGWWGRWPAC*RGSSGA Trigger: TGCTCCGCTGGACCCTCTTCAGCATGCAGGCCACCG...ACCCCACCATCCCCGGTCCTGGCTGCCCACACTCATCATGCAGTAGACATTATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| CDS-3UTR GCA 90 bp | CGGAAGACGGCACAAGTGGACACAGGGGCAGACTTTGTGCCTGCCAGGGCTAAGGCATGTAGCTGGAGGTaGCAAGCAGCATGTGACCGG | + |
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Preference number: 4 (lower is better) Translates to: RKTAQVDTGADFVPARAKACSWR*QAACDR Trigger: CCGGTCACATGCTGCTTGGCACCTCCAGCTACATGC...CTTAGCCCTGGCAGGCACAAAGTCTGCCCCTGTGTCCACTTGTGCCGTCTTCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| CDS-3UTR TCA 90 bp | CGGAAGACGGCACAAGTGGACACAGGGGCAGACTTTGTGCCTGCCAGGGCTAAGCCAAGCTGTGAGCCATaGTGCCTTTGCGAACCTTCC | + |
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Preference number: 4 (lower is better) Translates to: RKTAQVDTGADFVPARAKPSCEP*CLCEPS Trigger: GGAAGGTTCGCAAAGGCATCATGGCTCACAGCTTGG...CTTAGCCCTGGCAGGCACAAAGTCTGCCCCTGTGTCCACTTGTGCCGTCTTCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| CDS-3UTR TCA 90 bp | CACGGAAGACGGCACAAGTGGACACAGGGGCAGACTTTGTGCCTGCCAGGGCTAAGGTCCTCCAAGCTGTaGGCCATGATGCCTTTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: HGRRHKWTQGQTLCLPGLRSSKL*AMMPLR Trigger: TCGCAAAGGCATCATGGCTCACAGCTTGGAGGACCT...TAGCCCTGGCAGGCACAAAGTCTGCCCCTGTGTCCACTTGTGCCGTCTTCCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
||
| CDS-3UTR GCA 90 bp | AATAATGTCTACTGCATGATGAGTGTGGGCAGCCAGGACCGGGGATGGTGGGGTGTGCTCACTGCCACATaGCTGGACAGCGACCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NNVYCMMSVGSQDRGWWGVLTAT*LDSDLG Trigger: CCCCAGGTCGCTGTCCAGGCATGTGGCAGTGAGCAC...ACCCCACCATCCCCGGTCCTGGCTGCCCACACTCATCATGCAGTAGACATTATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
||
| CDS-3UTR TCA 90 bp | AGGAGGGGCCTGGGTGACTCAGAATCATCTGCATTCCCTAAGGTCCCTCCCTGGTGGGGTACAGGAGGCTaGGAGACTTCATGGCGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: RRGLGDSESSAFPKVPPWWGTGG*ETSWRS Trigger: ACTACGCCATGAAGTCTCTCAGCCTCCTGTACCCCA...CCAGGGAGGGACCTTAGGGAATGCAGATGATTCTGAGTCACCCAGGCCCCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
||
| CDS-3UTR GCA 90 bp | AATAATGTCTACTGCATGATGAGTGTGGGCAGCCAGGACCGGGGATGGTGGGGTGGGGGCTTCCACTTCTaGCCCTTCAGCAGGACCATG | + |
|
Preference number: 4 (lower is better) Translates to: NNVYCMMSVGSQDRGWWGGGFHF*PFSRTM Trigger: CATGGTCCTGCTGAAGGGGCAGAAGTGGAAGCCCCC...ACCCCACCATCCCCGGTCCTGGCTGCCCACACTCATCATGCAGTAGACATTATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
||
| CDS-3UTR CCA 90 bp | AATAATGTCTACTGCATGATGAGTGTGGGCAGCCAGGACCGGGGATGGTGGGGTGGAGGGAGGAGGGCTTaGCCTTGGCAGGCTGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NNVYCMMSVGSQDRGWWGGGRRA*PWQAVL Trigger: AAGAACAGCCTGCCAAGGCCAAGCCCTCCTCCCTCC...ACCCCACCATCCCCGGTCCTGGCTGCCCACACTCATCATGCAGTAGACATTATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
||
| CDS-3UTR GCA 90 bp | CTGCAATTTCCTTGGTGCTGTGCTGTGAGGGAGGCGCAGGCAGGTGAGAAGCTGGCATCTCCTTCACGATaGGCTTGGCCTTGTAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LQFPWCCAVREAQAGEKLASPSR*AWPCSS Trigger: ACTGCTACAAGGCCAAGCGCATCGTGAAGGAGATGC...CAGCTTCTCACCTGCCTGCGCCTCCCTCACAGCACAGCACCAAGGAAATTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
||
| CDS-3UTR CCA 90 bp | AGGAGGGGCCTGGGTGACTCAGAATCATCTGCATTCCCTAAGGTCCCTCCCTGGACTGCTGCATGTAGCTaGAGGTGCCAAGCAGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: RRGLGDSESSAFPKVPPWTAACS*RCQAAC Trigger: ACATGCTGCTTGGCACCTCCAGCTACATGCAGCAGT...CCAGGGAGGGACCTTAGGGAATGCAGATGATTCTGAGTCACCCAGGCCCCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
||
| CDS-3UTR CCA 90 bp | CTGCAATTTCCTTGGTGCTGTGCTGTGAGGGAGGCGCAGGCAGGTGAGAAGCTGACTGCTGCATGTAGCTaGAGGTGCCAAGCAGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: LQFPWCCAVREAQAGEKLTAACS*RCQAAC Trigger: ACATGCTGCTTGGCACCTCCAGCTACATGCAGCAGT...CAGCTTCTCACCTGCCTGCGCCTCCCTCACAGCACAGCACCAAGGAAATTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
||
| 3UTR CAA 72 bp | CACGGAAGACGGCACAAGTGGACACAGGGGCAGACTTaGTGCCTGCCAGGGCTAAGTGTTAGTCCTCTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: HGRRHKWTQGQT*CLPGLSVSPLS Trigger: GCTTAGAGGACTAACACTTAGCCCTGGCAGGCACAAAGTCTGCCCCTGTGTCCACTTGTGCCGTCTTCCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
||
| CDS-3UTR GCA 90 bp | GACATAGTTGGTGCTGTGGCATGCTGCTCGCTTGGTTGTCTTGATTCAGGCCAAGGGGGCTTCCACTTCTaGCCCTTCAGCAGGACCATG | + |
|
Preference number: 4 (lower is better) Translates to: DIVGAVACCSLGCLDSGQGGFHF*PFSRTM Trigger: CATGGTCCTGCTGAAGGGGCAGAAGTGGAAGCCCCC...TTGGCCTGAATCAAGACAACCAAGCGAGCAGCATGCCACAGCACCAACTATGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
||
| CDS-3UTR TCA 90 bp | GATGGGGGCCACCATAATAATGTCTACTGCATGATGAGTGTGGGCAGCCAGGACTGGGGTACAGGAGGCTaGGAGACTTCATGGCGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: DGGHHNNVYCMMSVGSQDWGTGG*ETSWRS Trigger: ACTACGCCATGAAGTCTCTCAGCCTCCTGTACCCCA...GTCCTGGCTGCCCACACTCATCATGCAGTAGACATTATTATGGTGGCCCCCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
||
| CDS-3UTR TCA 90 bp | CTGCAATTTCCTTGGTGCTGTGCTGTGAGGGAGGCGCAGGCAGGTGAGAAGCTGCCTTCAGCAGGACCATaGACATGGTATCTTTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LQFPWCCAVREAQAGEKLPSAGP*TWYLLP Trigger: TGGCAAAAGATACCATGTTCATGGTCCTGCTGAAGG...CAGCTTCTCACCTGCCTGCGCCTCCCTCACAGCACAGCACCAAGGAAATTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
||
| CDS-3UTR GCA 90 bp | GACATAGTTGGTGCTGTGGCATGCTGCTCGCTTGGTTGTCTTGATTCAGGCCAAGCTGGGCTCTCTTCTTaGGCTGTTCTGATGGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DIVGAVACCSLGCLDSGQAGLSS*AVLMGA Trigger: AGCCCCCATCAGAACAGCGCAAGAAGAGAGCCCAGC...TTGGCCTGAATCAAGACAACCAAGCGAGCAGCATGCCACAGCACCAACTATGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
||
| CDS-3UTR CCA 90 bp | CCAAGGTATGATGGGGGCCACCATAATAATGTCTACTGCATGATGAGTGTGGGCGGAGGGAGGAGGGCTTaGCCTTGGCAGGCTGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PRYDGGHHNNVYCMMSVGGGRRA*PWQAVL Trigger: AAGAACAGCCTGCCAAGGCCAAGCCCTCCTCCCTCC...GCCCACACTCATCATGCAGTAGACATTATTATGGTGGCCCCCATCATACCTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
||
| CDS-3UTR TCA 90 bp | TTCAGGCCAAGGTATGATGGGGGCCACCATAATAATGTCTACTGCATGATGAGTGTGCCAAGCAGCATGTaGCCGGTGGCCTGCATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FRPRYDGGHHNNVYCMMSVPSSM*PVACML Trigger: CAGCATGCAGGCCACCGGTCACATGCTGCTTGGCAC...ACTCATCATGCAGTAGACATTATTATGGTGGCCCCCATCATACCTTGGCCTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
||
| CDS-3UTR GCA 90 bp | TTCAGGCCAAGGTATGATGGGGGCCACCATAATAATGTCTACTGCATGATGAGTGGGTCACCACTGCCGTaGTCACTGCCACATGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FRPRYDGGHHNNVYCMMSGSPLP*SLPHAW Trigger: CCAGGCATGTGGCAGTGAGCACGGCAGTGGTGACCC...ACTCATCATGCAGTAGACATTATTATGGTGGCCCCCATCATACCTTGGCCTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTTAGTCCTCTAAGCTACCTGAGACAGAAAGGAAGGAACTGGGCCAGGCTAGCTGGGCTCTCTTCTTaGGCTGTTCTGATGGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVSPLSYLRQKGRNWARLAGLSS*AVLMGA Trigger: AGCCCCCATCAGAACAGCGCAAGAAGAGAGCCCAGC...TAGCCTGGCCCAGTTCCTTCCTTTCTGTCTCAGGTAGCTTAGAGGACTAACACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
||
| CDS-3UTR GCA 90 bp | GATGGGGGCCACCATAATAATGTCTACTGCATGATGAGTGTGGGCAGCCAGGACGCATCTCCTTCACGATaGGCTTGGCCTTGTAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: DGGHHNNVYCMMSVGSQDASPSR*AWPCSS Trigger: ACTGCTACAAGGCCAAGCGCATCGTGAAGGAGATGC...GTCCTGGCTGCCCACACTCATCATGCAGTAGACATTATTATGGTGGCCCCCATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
||
| CDS-3UTR GCA 90 bp | ACCATGGTCATAGACATAGTTGGTGCTGTGGCATGCTGCTCGCTTGGTTGTCTTGCATGTAGCTGGAGGTaGCAAGCAGCATGTGACCGG | + |
|
Preference number: 4 (lower is better) Translates to: TMVIDIVGAVACCSLGCLACSWR*QAACDR Trigger: CCGGTCACATGCTGCTTGGCACCTCCAGCTACATGC...AAGACAACCAAGCGAGCAGCATGCCACAGCACCAACTATGTCTATGACCATGGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
||
| CDS-3UTR CCA 90 bp | CTGCAATTTCCTTGGTGCTGTGCTGTGAGGGAGGCGCAGGCAGGTGAGAAGCTGTCTTTTGCCAGGGCTTaGAAGTATTCTTCTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQFPWCCAVREAQAGEKLSFARA*KYSSVS Trigger: GGAGACAGAAGAATACTTCCAAGCCCTGGCAAAAGA...CAGCTTCTCACCTGCCTGCGCCTCCCTCACAGCACAGCACCAAGGAAATTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
||
| CDS-3UTR CCA 90 bp | CTTACAGGAGGGGCCTGGGTGACTCAGAATCATCTGCATTCCCTAAGGTCCCTCTTCTTAGTTGGCTTCTaGGAAAGGGCTAGCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LTGGAWVTQNHLHSLRSLFLVGF*ERASWA Trigger: AGCCCAGCTAGCCCTTTCCCAGAAGCCAACTAAGAA...GAGGGACCTTAGGGAATGCAGATGATTCTGAGTCACCCAGGCCCCTCCTGTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
||
| CDS-3UTR TCA 90 bp | ACCATGGTCATAGACATAGTTGGTGCTGTGGCATGCTGCTCGCTTGGTTGTCTTCCAAGCTGTGAGCCATaGTGCCTTTGCGAACCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TMVIDIVGAVACCSLGCLPSCEP*CLCEPS Trigger: GGAAGGTTCGCAAAGGCATCATGGCTCACAGCTTGG...AAGACAACCAAGCGAGCAGCATGCCACAGCACCAACTATGTCTATGACCATGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
||
| CDS-3UTR TCA 90 bp | CTTACAGGAGGGGCCTGGGTGACTCAGAATCATCTGCATTCCCTAAGGTCCCTCCCTTCAGCAGGACCATaGACATGGTATCTTTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LTGGAWVTQNHLHSLRSLPSAGP*TWYLLP Trigger: TGGCAAAAGATACCATGTTCATGGTCCTGCTGAAGG...GAGGGACCTTAGGGAATGCAGATGATTCTGAGTCACCCAGGCCCCTCCTGTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
||
| CDS-3UTR GCA 90 bp | GACATAGTTGGTGCTGTGGCATGCTGCTCGCTTGGTTGTCTTGATTCAGGCCAATGTGTCATAGAGGGTTaGCTTCACGTTCAGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: DIVGAVACCSLGCLDSGQCVIEG*LHVQAA Trigger: GGCTGCCTGAACGTGAAGGCAACCCTCTATGACACA...TTGGCCTGAATCAAGACAACCAAGCGAGCAGCATGCCACAGCACCAACTATGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
||
| CDS-3UTR GCA 90 bp | CCAAGGTATGATGGGGGCCACCATAATAATGTCTACTGCATGATGAGTGTGGGCTGTGTCATAGAGGGTTaGCTTCACGTTCAGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PRYDGGHHNNVYCMMSVGCVIEG*LHVQAA Trigger: GGCTGCCTGAACGTGAAGGCAACCCTCTATGACACA...GCCCACACTCATCATGCAGTAGACATTATTATGGTGGCCCCCATCATACCTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
||
| CDS-3UTR CCA 90 bp | GATGGGGGCCACCATAATAATGTCTACTGCATGATGAGTGTGGGCAGCCAGGACAGTTTCAAGATGTCCTaGACCTTGTTCAGGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: DGGHHNNVYCMMSVGSQDSFKMS*TLFRRS Trigger: GGACCTCCTGAACAAGGTCCAGGACATCTTGAAACT...GTCCTGGCTGCCCACACTCATCATGCAGTAGACATTATTATGGTGGCCCCCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
||
| CDS-3UTR TCA 90 bp | GGTATCAGCATAAATAGTTTACTGCAGACTCTAATACCATTCACTCATTCGTGGGTGCCAAGCAGCATGTaGCCGGTGGCCTGCATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GISINSLLQTLIPFTHSWVPSSM*PVACML Trigger: CAGCATGCAGGCCACCGGTCACATGCTGCTTGGCAC...CCACGAATGAGTGAATGGTATTAGAGTCTGCAGTAAACTATTTATGCTGATACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
||
| CDS-3UTR CCA 90 bp | ACCATGGTCATAGACATAGTTGGTGCTGTGGCATGCTGCTCGCTTGGTTGTCTTTCTTTTGCCAGGGCTTaGAAGTATTCTTCTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TMVIDIVGAVACCSLGCLSFARA*KYSSVS Trigger: GGAGACAGAAGAATACTTCCAAGCCCTGGCAAAAGA...AAGACAACCAAGCGAGCAGCATGCCACAGCACCAACTATGTCTATGACCATGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTTAGTCCTCTAAGCTACCTGAGACAGAAAGGAAGGAACTGGGCCAGGCTAGAACATGGTATCTTTTaGCAGGGCTTGGAAGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: SVSPLSYLRQKGRNWARLEHGIF*QGLEVF Trigger: GAATACTTCCAAGCCCTGGCAAAAGATACCATGTTC...TAGCCTGGCCCAGTTCCTTCCTTTCTGTCTCAGGTAGCTTAGAGGACTAACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
||
| CDS-3UTR CCA 90 bp | TTCAGGCCAAGGTATGATGGGGGCCACCATAATAATGTCTACTGCATGATGAGTAGTTTCAAGATGTCCTaGACCTTGTTCAGGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FRPRYDGGHHNNVYCMMSSFKMS*TLFRRS Trigger: GGACCTCCTGAACAAGGTCCAGGACATCTTGAAACT...ACTCATCATGCAGTAGACATTATTATGGTGGCCCCCATCATACCTTGGCCTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
||
| CDS CCA 90 bp | GGCCTGGCCCTCGGGGTCTCCCGGCTGGGCTTAGACACCAGCTGTTaGGTCACCACTGCCGTGCTCACTGCCACATGCCTGGACAGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: GLALGVSRLGLDTSC*VTTAVLTATCLDSD Trigger: GTCGCTGTCCAGGCATGTGGCAGTGAGCACGGCAGTGGTGACCCAACAGCTGGTGTCTAAGCCCAGCCGGGAGACCCCGAGGGCCAGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 ENSMUST00000113091.8 ENSMUST00000133348.2 |
||
| CDS GCA 90 bp | CGGGGTCTCCCGGCTGGGCTTAGACACCAGCTGTTGGGTCACCACTaGCGTGCTCACTGCCACATGCCTGGACAGCGACCTGGGGTACAG | + |
|
Preference number: 5 (lower is better) Translates to: RGLPAGLRHQLLGHH*RAHCHMPGQRPGVQ Trigger: CTGTACCCCAGGTCGCTGTCCAGGCATGTGGCAGTGAGCACGGCAGTGGTGACCCAACAGCTGGTGTCTAAGCCCAGCCGGGAGACCCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 ENSMUST00000113091.8 ENSMUST00000133348.2 |
||
| CDS GCA 90 bp | GTCCTCCAAGCTGTGAGCCATGATGCCTTTGCGAACCTTCCGATCTaGGGTGCTAACACGACAGGGCCTGGCCCTCGGGGTCTCCCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VLQAVSHDAFANLPI*GANTTGPGPRGLPA Trigger: AGCCGGGAGACCCCGAGGGCCAGGCCCTGTCGTGTTAGCACCGCAGATCGGAAGGTTCGCAAAGGCATCATGGCTCACAGCTTGGAGGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 ENSMUST00000113091.8 ENSMUST00000133348.2 |
||
| CDS GCA 90 bp | GCTGGGCTTAGACACCAGCTGTTGGGTCACCACTGCCGTGCTCACTaGCACATGCCTGGACAGCGACCTGGGGTACAGGAGGCTGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: AGLRHQLLGHHCRAH*HMPGQRPGVQEAER Trigger: TCTCTCAGCCTCCTGTACCCCAGGTCGCTGTCCAGGCATGTGGCAGTGAGCACGGCAGTGGTGACCCAACAGCTGGTGTCTAAGCCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 ENSMUST00000113091.8 ENSMUST00000133348.2 |
||
| CDS CCA 90 bp | GGAGGAGGGAGGAGGGCTTGGCCTTGGCAGGCTGTTCTTCCTCGGTaGCATCCAGGAACTGCTGCATGTAGCTGGAGGTGCCAAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GGGRRAWPWQAVLPR*HPGTAACSWRCQAA Trigger: TGCTGCTTGGCACCTCCAGCTACATGCAGCAGTTCCTGGATGCCACCGAGGAAGAACAGCCTGCCAAGGCCAAGCCCTCCTCCCTCCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 ENSMUST00000113091.8 |
||
| CDS TCA 90 bp | TGTAGCTGGAGGTGCCAAGCAGCATGTGACCGGTGGCCTGCATGCTaGAGAGGGTCCAGCGGAGCATCTCCTTCACGATGCGCTTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: CSWRCQAACDRWPAC*RGSSGASPSRCAWP Trigger: AGGCCAAGCGCATCGTGAAGGAGATGCTCCGCTGGACCCTCTTCAGCATGCAGGCCACCGGTCACATGCTGCTTGGCACCTCCAGCTACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 ENSMUST00000113091.8 |
||
| CDS-3UTR CAA 90 bp | CTGCAATTTCCTTGGTGCTGTGCTGTGAGGGAGGCGCAGGCAGGTGAGAAGCTGGAGGAGGGCTTGGCCTaGGCAGGCTGTTCTTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LQFPWCCAVREAQAGEKLEEGLA*AGCSSS Trigger: CGAGGAAGAACAGCCTGCCAAGGCCAAGCCCTCCTC...CAGCTTCTCACCTGCCTGCGCCTCCCTCACAGCACAGCACCAAGGAAATTGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
||
| CDS GCA 90 bp | TTAGACACCAGCTGTTGGGTCACCACTGCCGTGCTCACTGCCACATaGCTGGACAGCGACCTGGGGTACAGGAGGCTGAGAGACTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: LDTSCWVTTAVLTAT*LDSDLGYRRLRDFM Trigger: CATGAAGTCTCTCAGCCTCCTGTACCCCAGGTCGCTGTCCAGGCATGTGGCAGTGAGCACGGCAGTGGTGACCCAACAGCTGGTGTCTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 ENSMUST00000113091.8 ENSMUST00000133348.2 |
||
| CDS-3UTR CAA 90 bp | AGGAGGGGCCTGGGTGACTCAGAATCATCTGCATTCCCTAAGGTCCCTCCCTGGCTTAGACACCAGCTGTaGGGTCACCACTGCCGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RRGLGDSESSAFPKVPPWLRHQL*GHHCRA Trigger: AGCACGGCAGTGGTGACCCAACAGCTGGTGTCTAAG...CCAGGGAGGGACCTTAGGGAATGCAGATGATTCTGAGTCACCCAGGCCCCTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
||
| CDS-3UTR CAA 90 bp | GATGGGGGCCACCATAATAATGTCTACTGCATGATGAGTGTGGGCAGCCAGGACGAGGAGGGCTTGGCCTaGGCAGGCTGTTCTTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: DGGHHNNVYCMMSVGSQDEEGLA*AGCSSS Trigger: CGAGGAAGAACAGCCTGCCAAGGCCAAGCCCTCCTC...GTCCTGGCTGCCCACACTCATCATGCAGTAGACATTATTATGGTGGCCCCCATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
||
| CDS TCA 90 bp | TGCTCACTGCCACATGCCTGGACAGCGACCTGGGGTACAGGAGGCTaGGAGACTTCATGGCGTAGTCCATCCTTGTCAGTTGGATTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: CSLPHAWTATWGTGG*ETSWRSPSLSVGLC Trigger: ACACAATCCAACTGACAAGGATGGACTACGCCATGAAGTCTCTCAGCCTCCTGTACCCCAGGTCGCTGTCCAGGCATGTGGCAGTGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113091.8 |
||
| CDS-3UTR CAA 90 bp | GATGGGGGCCACCATAATAATGTCTACTGCATGATGAGTGTGGGCAGCCAGGACCTTAGACACCAGCTGTaGGGTCACCACTGCCGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: DGGHHNNVYCMMSVGSQDLRHQL*GHHCRA Trigger: AGCACGGCAGTGGTGACCCAACAGCTGGTGTCTAAG...GTCCTGGCTGCCCACACTCATCATGCAGTAGACATTATTATGGTGGCCCCCATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
||
| CDS-3UTR CAA 90 bp | CTTACAGGAGGGGCCTGGGTGACTCAGAATCATCTGCATTCCCTAAGGTCCCTCAAGATGTCCTGGACCTaGTTCAGGAGGTCCTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LTGGAWVTQNHLHSLRSLKMSWT*FRRSSK Trigger: CTTGGAGGACCTCCTGAACAAGGTCCAGGACATCTT...GAGGGACCTTAGGGAATGCAGATGATTCTGAGTCACCCAGGCCCCTCCTGTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
||
| CDS-3UTR CAA 90 bp | GATGGGGGCCACCATAATAATGTCTACTGCATGATGAGTGTGGGCAGCCAGGACAAGATGTCCTGGACCTaGTTCAGGAGGTCCTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: DGGHHNNVYCMMSVGSQDKMSWT*FRRSSK Trigger: CTTGGAGGACCTCCTGAACAAGGTCCAGGACATCTT...GTCCTGGCTGCCCACACTCATCATGCAGTAGACATTATTATGGTGGCCCCCATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| CDS TCA 90 bp | AGTTTCAAGATGTCCTGGACCTTGTTCAGGAGGTCCTCCAAGCTGTaGGCCATGATGCCTTTGCGAACCTTCCGATCTGCGGTGCTAACA | + |
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Preference number: 5 (lower is better) Translates to: SFKMSWTLFRRSSKL*AMMPLRTFRSAVLT Trigger: TGTTAGCACCGCAGATCGGAAGGTTCGCAAAGGCATCATGGCTCACAGCTTGGAGGACCTCCTGAACAAGGTCCAGGACATCTTGAAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 ENSMUST00000113091.8 ENSMUST00000133348.2 |
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| CDS-3UTR CAA 90 bp | GATGGGGGCCACCATAATAATGTCTACTGCATGATGAGTGTGGGCAGCCAGGACATCTTTTGCCAGGGCTaGGAAGTATTCTTCTGTCTC | + |
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Preference number: 5 (lower is better) Translates to: DGGHHNNVYCMMSVGSQDIFCQG*EVFFCL Trigger: GAGACAGAAGAATACTTCCAAGCCCTGGCAAAAGAT...GTCCTGGCTGCCCACACTCATCATGCAGTAGACATTATTATGGTGGCCCCCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| CDS-3UTR CAA 90 bp | ACCATGGTCATAGACATAGTTGGTGCTGTGGCATGCTGCTCGCTTGGTTGTCTTACCAGGGAGAAGGGCTaGTCTTTAAGTTTCAAGATG | + |
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Preference number: 5 (lower is better) Translates to: TMVIDIVGAVACCSLGCLTREKG*SLSFKM Trigger: CATCTTGAAACTTAAAGACAAGCCCTTCTCCCTGGT...AAGACAACCAAGCGAGCAGCATGCCACAGCACCAACTATGTCTATGACCATGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| CDS-3UTR CAA 90 bp | GGTATCAGCATAAATAGTTTACTGCAGACTCTAATACCATTCACTCATTCGTGGATCTTTTGCCAGGGCTaGGAAGTATTCTTCTGTCTC | + |
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Preference number: 5 (lower is better) Translates to: GISINSLLQTLIPFTHSWIFCQG*EVFFCL Trigger: GAGACAGAAGAATACTTCCAAGCCCTGGCAAAAGAT...CCACGAATGAGTGAATGGTATTAGAGTCTGCAGTAAACTATTTATGCTGATACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 |
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| CDS CAA 90 bp | GGGCCTGGCCCTCGGGGTCTCCCGGCTGGGCTTAGACACCAGCTGTaGGGTCACCACTGCCGTGCTCACTGCCACATGCCTGGACAGCGA | + |
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Preference number: 6 (lower is better) Translates to: GPGPRGLPAGLRHQL*GHHCRAHCHMPGQR Trigger: TCGCTGTCCAGGCATGTGGCAGTGAGCACGGCAGTGGTGACCCAACAGCTGGTGTCTAAGCCCAGCCGGGAGACCCCGAGGGCCAGGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 ENSMUST00000113091.8 ENSMUST00000133348.2 |
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| CDS CAA 72 bp | CCTCGGGGTCTCCCGGCTGGGCTTAGACACCAGCTGTaGGGTCACCACTGCCGTGCTCACTGCCACATGCCT | + |
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Preference number: 6 (lower is better) Translates to: PRGLPAGLRHQL*GHHCRAHCHMP Trigger: AGGCATGTGGCAGTGAGCACGGCAGTGGTGACCCAACAGCTGGTGTCTAAGCCCAGCCGGGAGACCCCGAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 ENSMUST00000113091.8 ENSMUST00000133348.2 |
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| CDS GCA 72 bp | CCGGCTGGGCTTAGACACCAGCTGTTGGGTCACCACTaGCGTGCTCACTGCCACATGCCTGGACAGCGACCT | + |
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Preference number: 6 (lower is better) Translates to: PAGLRHQLLGHH*RAHCHMPGQRP Trigger: AGGTCGCTGTCCAGGCATGTGGCAGTGAGCACGGCAGTGGTGACCCAACAGCTGGTGTCTAAGCCCAGCCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 ENSMUST00000113091.8 ENSMUST00000133348.2 |
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| CDS GCA 72 bp | AGCTGTTGGGTCACCACTGCCGTGCTCACTGCCACATaGCTGGACAGCGACCTGGGGTACAGGAGGCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: SCWVTTAVLTAT*LDSDLGYRRLR Trigger: TCTCAGCCTCCTGTACCCCAGGTCGCTGTCCAGGCATGTGGCAGTGAGCACGGCAGTGGTGACCCAACAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 ENSMUST00000113091.8 ENSMUST00000133348.2 |
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| CDS GCA 72 bp | AGACACCAGCTGTTGGGTCACCACTGCCGTGCTCACTaGCACATGCCTGGACAGCGACCTGGGGTACAGGAG | + |
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Preference number: 6 (lower is better) Translates to: RHQLLGHHCRAH*HMPGQRPGVQE Trigger: CTCCTGTACCCCAGGTCGCTGTCCAGGCATGTGGCAGTGAGCACGGCAGTGGTGACCCAACAGCTGGTGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 ENSMUST00000113091.8 ENSMUST00000133348.2 |
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| CDS GCA 72 bp | GCTGTGAGCCATGATGCCTTTGCGAACCTTCCGATCTaGGGTGCTAACACGACAGGGCCTGGCCCTCGGGGT | + |
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Preference number: 6 (lower is better) Translates to: AVSHDAFANLPI*GANTTGPGPRG Trigger: ACCCCGAGGGCCAGGCCCTGTCGTGTTAGCACCGCAGATCGGAAGGTTCGCAAAGGCATCATGGCTCACAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 ENSMUST00000113091.8 ENSMUST00000133348.2 |
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| CDS TCA 72 bp | AGGTGCCAAGCAGCATGTGACCGGTGGCCTGCATGCTaGAGAGGGTCCAGCGGAGCATCTCCTTCACGATGC | + |
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Preference number: 6 (lower is better) Translates to: RCQAACDRWPAC*RGSSGASPSRC Trigger: GCATCGTGAAGGAGATGCTCCGCTGGACCCTCTTCAGCATGCAGGCCACCGGTCACATGCTGCTTGGCACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 ENSMUST00000113091.8 |
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| CDS CCA 72 bp | AGGAGGGCTTGGCCTTGGCAGGCTGTTCTTCCTCGGTaGCATCCAGGAACTGCTGCATGTAGCTGGAGGTGC | + |
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Preference number: 6 (lower is better) Translates to: RRAWPWQAVLPR*HPGTAACSWRC Trigger: GCACCTCCAGCTACATGCAGCAGTTCCTGGATGCCACCGAGGAAGAACAGCCTGCCAAGGCCAAGCCCTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 ENSMUST00000113091.8 |
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| CDS TCA 72 bp | CCACATGCCTGGACAGCGACCTGGGGTACAGGAGGCTaGGAGACTTCATGGCGTAGTCCATCCTTGTCAGTT | + |
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Preference number: 6 (lower is better) Translates to: PHAWTATWGTGG*ETSWRSPSLSV Trigger: AACTGACAAGGATGGACTACGCCATGAAGTCTCTCAGCCTCCTGTACCCCAGGTCGCTGTCCAGGCATGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113091.8 |
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| CDS TCA 72 bp | ATGTCCTGGACCTTGTTCAGGAGGTCCTCCAAGCTGTaGGCCATGATGCCTTTGCGAACCTTCCGATCTGCG | + |
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Preference number: 6 (lower is better) Translates to: MSWTLFRRSSKL*AMMPLRTFRSA Trigger: CGCAGATCGGAAGGTTCGCAAAGGCATCATGGCTCACAGCTTGGAGGACCTCCTGAACAAGGTCCAGGACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 ENSMUST00000113091.8 ENSMUST00000133348.2 |
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| CDS CCA 72 bp | TCGATCTTCTTAGTTGGCTTCTGGGAAAGGGCTAGCTaGGCTCTCTTCTTGCGCTGTTCTGATGGGGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: SIFLVGFWERAS*ALFLRCSDGGF Trigger: GAAGCCCCCATCAGAACAGCGCAAGAAGAGAGCCCAGCTAGCCCTTTCCCAGAAGCCAACTAAGAAGATCGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032416.11 ENSMUST00000113089.8 ENSMUST00000113091.8 |
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