Pregenerated sensors for CFAP97 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031631Ensembl transcript IDs: ENSMUST00000034048.13, ENSMUST00000110376.8, ENSMUST00000145229.2, ENSMUST00000164504.2
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCCCTGCTAAGGAAGATGGAGCAGGTGTGGTACACATGCCACAGTaGTGGAGCACTGGCACCAGACGGATCTCTCTGTGGCTAGGGAAA | + |
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Preference number: 1 (lower is better) Translates to: LPAKEDGAGVVHMPQ*WSTGTRRISLWLGK Trigger: TTTCCCTAGCCACAGAGAGATCCGTCTGGTGCCAGTGCTCCAGCACTGTGGCATGTGTACCACACCTGCTCCATCTTCCTTAGCAGGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR CCA 90 bp | CCTGCTAAGGAAGATGGAGCAGGTGTGGTACACATGCCACAGTGCTaGAGCACTGGCACCAGACGGATCTCTCTGTGGCTAGGGAAAACT | + |
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Preference number: 1 (lower is better) Translates to: PAKEDGAGVVHMPQC*STGTRRISLWLGKT Trigger: AGTTTTCCCTAGCCACAGAGAGATCCGTCTGGTGCCAGTGCTCCAGCACTGTGGCATGTGTACCACACCTGCTCCATCTTCCTTAGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR GCA 90 bp | GTGTGTGTGTGTTCGTGCGTGTGCGGTCTGTGTGTGTGCTATATGTaGTCAGCATTGTTTTGGCCTCAGCATTTTCTCCCTTCGCTGCTC | + |
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Preference number: 1 (lower is better) Translates to: VCVCSCVCGLCVCYM*SALFWPQHFLPSLL Trigger: GAGCAGCGAAGGGAGAAAATGCTGAGGCCAAAACAATGCTGAGCACATATAGCACACACACAGACCGCACACGCACGAACACACACACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR CCA 90 bp | TGCGTGTGCGGTCTGTGTGTGTGCTATATGTGCTCAGCATTGTTTTaGCCTCAGCATTTTCTCCCTTCGCTGCTCTATCTGAAACACCGT | + |
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Preference number: 1 (lower is better) Translates to: CVCGLCVCYMCSALF*PQHFLPSLLYLKHR Trigger: ACGGTGTTTCAGATAGAGCAGCGAAGGGAGAAAATGCTGAGGCCAAAACAATGCTGAGCACATATAGCACACACACAGACCGCACACGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR GCA 90 bp | TGTGTGTATGTGTGTGTGTGTTCGTGCGTGTGCGGTCTGTGTGTGTaGTATATGTGCTCAGCATTGTTTTGGCCTCAGCATTTTCTCCCT | + |
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Preference number: 1 (lower is better) Translates to: CVYVCVCSCVCGLCV*YMCSALFWPQHFLP Trigger: AGGGAGAAAATGCTGAGGCCAAAACAATGCTGAGCACATATAGCACACACACAGACCGCACACGCACGAACACACACACACATACACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR CCA 90 bp | GCTTCTGAAGTGAACCCTGTTACTCACAGTGTGAGATGGTGTGGGTaGAGAGTCAGACTCTTCAGAAGTGTCTTTGGTGAATCAGGGATT | + |
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Preference number: 1 (lower is better) Translates to: ASEVNPVTHSVRWCG*RVRLFRSVFGESGI Trigger: AATCCCTGATTCACCAAAGACACTTCTGAAGAGTCTGACTCTCCACCCACACCATCTCACACTGTGAGTAACAGGGTTCACTTCAGAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR CCA 90 bp | CCTATCACAATCACCTTTCAGAGCCGCGTAGCTGCTTTTGATACTTaGGTTGCGCACAACTGCATGGTGTTACTTTACAAGCAAAGCACA | + |
|
Preference number: 1 (lower is better) Translates to: PITITFQSRVAAFDT*VAHNCMVLLYKQST Trigger: TGTGCTTTGCTTGTAAAGTAACACCATGCAGTTGTGCGCAACCCAAGTATCAAAAGCAGCTACGCGGCTCTGAAAGGTGATTGTGATAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR TCA 90 bp | CTTTCACAAAAACTTACTAGAGAAGGAGGTAACATTCAATCGAGATaGAAACTGTCCTCAGATCTGTCTACGAGTCAGCAGACCTGCCCG | + |
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Preference number: 1 (lower is better) Translates to: LSQKLTREGGNIQSR*KLSSDLSTSQQTCP Trigger: CGGGCAGGTCTGCTGACTCGTAGACAGATCTGAGGACAGTTTTCATCTCGATTGAATGTTACCTCCTTCTCTAGTAAGTTTTTGTGAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR CCA 90 bp | CCAGGGCAAAGGTGCGTCTTCAGCTTTACTGTAATCTTAATACTTTaGAGTTGCTGCATTGTATCTGCAGATGAGAAGCAGAACCTATCA | + |
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Preference number: 1 (lower is better) Translates to: PGQRCVFSFTVILIL*SCCIVSADEKQNLS Trigger: TGATAGGTTCTGCTTCTCATCTGCAGATACAATGCAGCAACTCCAAAGTATTAAGATTACAGTAAAGCTGAAGACGCACCTTTGCCCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR TCA 90 bp | TCTAGGCATGCGCTTCTGGTTCTTCAAGCTCAGAGTGTTGCTCACTaGTCCAACAAATACTTGCTTTTGTTTATTATGCAAGTGATCTGG | + |
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Preference number: 1 (lower is better) Translates to: SRHALLVLQAQSVAH*SNKYLLLFIMQVIW Trigger: CCAGATCACTTGCATAATAAACAAAAGCAAGTATTTGTTGGATCAGTGAGCAACACTCTGAGCTTGAAGAACCAGAAGCGCATGCCTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR TCA 90 bp | GCAAGGGAATTCTCTAGCATCAAGGCAATAGCTTTAGGCAATGTGTaGTTACTTTCTTTCTTGTTTCTATTTGGTTTCTCTAGAGCATTT | + |
|
Preference number: 1 (lower is better) Translates to: AREFSSIKAIALGNV*LLSFLFLFGFSRAF Trigger: AAATGCTCTAGAGAAACCAAATAGAAACAAGAAAGAAAGTAATCACACATTGCCTAAAGCTATTGCCTTGATGCTAGAGAATTCCCTTGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR GCA 90 bp | CTTTCTTTCTTGTTTCTATTTGGTTTCTCTAGAGCATTTCTTCCTTaGTCTAAGCCTTCTATTACTACAATAAATACACAACAGCAGCAC | + |
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Preference number: 1 (lower is better) Translates to: LSFLFLFGFSRAFLP*SKPSITTINTQQQH Trigger: GTGCTGCTGTTGTGTATTTATTGTAGTAATAGAAGGCTTAGAGCAAGGAAGAAATGCTCTAGAGAAACCAAATAGAAACAAGAAAGAAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR-3UTR GCA 90 bp | CGTGCGTGTGCGGTCTGTGTGTGTGCTATATGTGCTCAGCATTGTTTTGGCCTCCAGGTGTGGTACACATaGCACAGTGCTGGAGCACTG | + |
|
Preference number: 2 (lower is better) Translates to: RACAVCVCAICAQHCFGLQVWYT*HSAGAL Trigger: CAGTGCTCCAGCACTGTGGCATGTGTACCACACCTG...GAGGCCAAAACAATGCTGAGCACATATAGCACACACACAGACCGCACACGCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR-3UTR TCA 90 bp | ATGCAGATCTTCCGAGCACGTGTGCTAAGGGCCAGCCAGCCATGCAACAGTGCTACTCACATAAGCACGTaGGGACTCGAGTTACAGACA | + |
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Preference number: 2 (lower is better) Translates to: MQIFRARVLRASQPCNSATHIST*GLELQT Trigger: TGTCTGTAACTCGAGTCCTCACGTGCTTATGTGAGT...AGCACTGTTGCATGGCTGGCTGGCCCTTAGCACACGTGCTCGGAAGATCTGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR-3UTR CCA 90 bp | CGTGCGTGTGCGGTCTGTGTGTGTGCTATATGTGCTCAGCATTGTTTTGGCCTCGTGAGATGGTGTGGGTaGAGAGTCAGACTCTTCAGA | + |
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Preference number: 2 (lower is better) Translates to: RACAVCVCAICAQHCFGLVRWCG*RVRLFR Trigger: TCTGAAGAGTCTGACTCTCCACCCACACCATCTCAC...GAGGCCAAAACAATGCTGAGCACATATAGCACACACACAGACCGCACACGCACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR CAA 90 bp | GTGCGTGTGCGGTCTGTGTGTGTGCTATATGTGCTCAGCATTGTTTaGGCCTCAGCATTTTCTCCCTTCGCTGCTCTATCTGAAACACCG | + |
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Preference number: 2 (lower is better) Translates to: VRVRSVCVLYVLSIV*ASAFSPFAALSETP Trigger: CGGTGTTTCAGATAGAGCAGCGAAGGGAGAAAATGCTGAGGCCAAAACAATGCTGAGCACATATAGCACACACACAGACCGCACACGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR-3UTR TCA 90 bp | CGTGTGCGGTCTGTGTGTGTGCTATATGTGCTCAGCATTGTTTTGGCCTCAGCAGAGCAGCTTCTGAAGTaGACCCTGTTACTCACAGTG | + |
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Preference number: 2 (lower is better) Translates to: RVRSVCVLYVLSIVLASAEQLLK*TLLLTV Trigger: CACTGTGAGTAACAGGGTTCACTTCAGAAGCTGCTC...TGCTGAGGCCAAAACAATGCTGAGCACATATAGCACACACACAGACCGCACACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR CAA 90 bp | TGTTCGTGCGTGTGCGGTCTGTGTGTGTGCTATATGTGCTCAGCATaGTTTTGGCCTCAGCATTTTCTCCCTTCGCTGCTCTATCTGAAA | + |
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Preference number: 2 (lower is better) Translates to: CSCVCGLCVCYMCSA*FWPQHFLPSLLYLK Trigger: TTTCAGATAGAGCAGCGAAGGGAGAAAATGCTGAGGCCAAAACAATGCTGAGCACATATAGCACACACACAGACCGCACACGCACGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCATGGTGTTACTTTACAAGCAAAGCACAGCGTTAGTGGAGTAGCCGTGAGATGCGGTCTGTGTGTGTaGTATATGTGCTCAGCATTG | + |
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Preference number: 2 (lower is better) Translates to: LHGVTLQAKHSVSGVAVRCGLCV*YMCSAL Trigger: CAATGCTGAGCACATATAGCACACACACAGACCGCA...TCTCACGGCTACTCCACTAACGCTGTGCTTTGCTTGTAAAGTAACACCATGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCATGGTGTTACTTTACAAGCAAAGCACAGCGTTAGTGGAGTAGCCGTGAGACTGCTCCACTGCAAATaGCTCCTAAATCCTACCTTC | + |
|
Preference number: 2 (lower is better) Translates to: LHGVTLQAKHSVSGVAVRLLHCK*LLNPTF Trigger: GAAGGTAGGATTTAGGAGGCATTTGCAGTGGAGCAG...TCTCACGGCTACTCCACTAACGCTGTGCTTTGCTTGTAAAGTAACACCATGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCATGGTGTTACTTTACAAGCAAAGCACAGCGTTAGTGGAGTAGCCGTGAGAGAGACCAGCAATGTATaGCCTGGTGTTTGTTTGCTA | + |
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Preference number: 2 (lower is better) Translates to: LHGVTLQAKHSVSGVAVRETSNV*PGVCLL Trigger: TAGCAAACAAACACCAGGGCATACATTGCTGGTCTC...TCTCACGGCTACTCCACTAACGCTGTGCTTTGCTTGTAAAGTAACACCATGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTGCCTCAGAATCCTTAAGAGTATTTTACCAGACGGCATAGAGAGCAGCTTCACTCACAGTGTGAGATaGTGTGGGTGGAGAGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: SCLRILKSILPDGIESSFTHSVR*CGWRVR Trigger: TCTGACTCTCCACCCACACCATCTCACACTGTGAGT...GAAGCTGCTCTCTATGCCGTCTGGTAAAATACTCTTAAGGATTCTGAGGCAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCATGGTGTTACTTTACAAGCAAAGCACAGCGTTAGTGGAGTAGCCGTGAGATGCTCAGCATTGTTTTaGCCTCAGCATTTTCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: LHGVTLQAKHSVSGVAVRCSALF*PQHFLP Trigger: AGGGAGAAAATGCTGAGGCCAAAACAATGCTGAGCA...TCTCACGGCTACTCCACTAACGCTGTGCTTTGCTTGTAAAGTAACACCATGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR-3UTR TCA 90 bp | TTCAAATGTGAGAATGGTAAGAATGGTGCTTCTAGGATTCAGCCAAACCAAAGCCTGTTACTCACAGTGTaGGATGGTGTGGGTGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: FKCENGKNGASRIQPNQSLLLTV*DGVGGE Trigger: CTCTCCACCCACACCATCTCACACTGTGAGTAACAG...GCTTTGGTTTGGCTGAATCCTAGAAGCACCATTCTTACCATTCTCACATTTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR-3UTR GCA 90 bp | TCTTGCCTCAGAATCCTTAAGAGTATTTTACCAGACGGCATAGAGAGCAGCTTCGATTGTCACCACTGCTaGTTTGTCAGCACAACTGAG | + |
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Preference number: 2 (lower is better) Translates to: SCLRILKSILPDGIESSFDCHHC*FVSTTE Trigger: CTCAGTTGTGCTGACAAAGCAGCAGTGGTGACAATC...GAAGCTGCTCTCTATGCCGTCTGGTAAAATACTCTTAAGGATTCTGAGGCAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR-3UTR GCA 90 bp | CTAAGTCAGCTTCTCCATGGAAGCAGACGTCAAAGCGTTTTCATAAGGAGTCTAGATTGTCACCACTGCTaGTTTGTCAGCACAACTGAG | + |
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Preference number: 2 (lower is better) Translates to: LSQLLHGSRRQSVFIRSLDCHHC*FVSTTE Trigger: CTCAGTTGTGCTGACAAAGCAGCAGTGGTGACAATC...TAGACTCCTTATGAAAACGCTTTGACGTCTGCTTCCATGGAGAAGCTGACTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR-3UTR GCA 90 bp | CGTGTGCGGTCTGTGTGTGTGCTATATGTGCTCAGCATTGTTTTGGCCTCAGCAAGAGCATTTCTTCCTTaGTCTAAGCCTTCTATTACT | + |
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Preference number: 2 (lower is better) Translates to: RVRSVCVLYVLSIVLASARAFLP*SKPSIT Trigger: AGTAATAGAAGGCTTAGAGCAAGGAAGAAATGCTCT...TGCTGAGGCCAAAACAATGCTGAGCACATATAGCACACACACAGACCGCACACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTGCCTCAGAATCCTTAAGAGTATTTTACCAGACGGCATAGAGAGCAGCTTCCAGAAGTGTCTTTGGTaGATCAGGGATTGCACAGTA | + |
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Preference number: 2 (lower is better) Translates to: SCLRILKSILPDGIESSFQKCLW*IRDCTV Trigger: TACTGTGCAATCCCTGATTCACCAAAGACACTTCTG...GAAGCTGCTCTCTATGCCGTCTGGTAAAATACTCTTAAGGATTCTGAGGCAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR-3UTR GCA 90 bp | TTCAAATGTGAGAATGGTAAGAATGGTGCTTCTAGGATTCAGCCAAACCAAAGCTTCAAGCCTACCTCTTaGCTCAGAATCCTTAAGAGT | + |
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Preference number: 2 (lower is better) Translates to: FKCENGKNGASRIQPNQSFKPTS*LRILKS Trigger: ACTCTTAAGGATTCTGAGGCAAGAGGTAGGCTTGAA...GCTTTGGTTTGGCTGAATCCTAGAAGCACCATTCTTACCATTCTCACATTTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR-3UTR GCA 90 bp | TTCAAATGTGAGAATGGTAAGAATGGTGCTTCTAGGATTCAGCCAAACCAAAGCAGAGCATTTCTTCCTTaGTCTAAGCCTTCTATTACT | + |
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Preference number: 2 (lower is better) Translates to: FKCENGKNGASRIQPNQSRAFLP*SKPSIT Trigger: AGTAATAGAAGGCTTAGAGCAAGGAAGAAATGCTCT...GCTTTGGTTTGGCTGAATCCTAGAAGCACCATTCTTACCATTCTCACATTTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR CCA 72 bp | CAGTCCGCCTCCCTGCTAAGGAAGATGGAGCAGGTGTaGTACACATGCCACAGTGCTGGAGCACTGGCACCA | + |
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Preference number: 3 (lower is better) Translates to: QSASLLRKMEQV*YTCHSAGALAP Trigger: TGGTGCCAGTGCTCCAGCACTGTGGCATGTGTACCACACCTGCTCCATCTTCCTTAGCAGGGAGGCGGACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR-3UTR CAA 90 bp | TCCTCAGATCTGTCTACGAGTCAGCAGACCTGCCCGCTGTCTAGCTGCAGATGCTGCCCTGGTGTTTGTTaGCTAAGTGCAGTCCGCCTC | + |
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Preference number: 3 (lower is better) Translates to: SSDLSTSQQTCPLSSCRCCPGVC*LSAVRL Trigger: GAGGCGGACTGCACTTAGCAAACAAACACCAGGGCA...GCATCTGCAGCTAGACAGCGGGCAGGTCTGCTGACTCGTAGACAGATCTGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR GCA 72 bp | AAGGAAGATGGAGCAGGTGTGGTACACATGCCACAGTaGTGGAGCACTGGCACCAGACGGATCTCTCTGTGG | + |
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Preference number: 3 (lower is better) Translates to: KEDGAGVVHMPQ*WSTGTRRISLW Trigger: CCACAGAGAGATCCGTCTGGTGCCAGTGCTCCAGCACTGTGGCATGTGTACCACACCTGCTCCATCTTCCTT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR CCA 72 bp | AGCAGGTGTGGTACACATGCCACAGTGCTGGAGCACTaGCACCAGACGGATCTCTCTGTGGCTAGGGAAAAC | + |
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Preference number: 3 (lower is better) Translates to: SRCGTHATVLEH*HQTDLSVAREN Trigger: GTTTTCCCTAGCCACAGAGAGATCCGTCTGGTGCCAGTGCTCCAGCACTGTGGCATGTGTACCACACCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR-3UTR CAA 90 bp | TCCTCAGATCTGTCTACGAGTCAGCAGACCTGCCCGCTGTCTAGCTGCAGATGCGAAATGTCACACACTTaGCTCTATAAAAGAACAGCC | + |
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Preference number: 3 (lower is better) Translates to: SSDLSTSQQTCPLSSCRCEMSHT*LYKRTA Trigger: GGCTGTTCTTTTATAGAGCAAAGTGTGTGACATTTC...GCATCTGCAGCTAGACAGCGGGCAGGTCTGCTGACTCGTAGACAGATCTGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR-3UTR CAA 90 bp | ATGCAGATCTTCCGAGCACGTGTGCTAAGGGCCAGCCAGCCATGCAACAGTGCTTATATGTGCTCAGCATaGTTTTGGCCTCAGCATTTT | + |
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Preference number: 3 (lower is better) Translates to: MQIFRARVLRASQPCNSAYMCSA*FWPQHF Trigger: AAAATGCTGAGGCCAAAACAATGCTGAGCACATATA...AGCACTGTTGCATGGCTGGCTGGCCCTTAGCACACGTGCTCGGAAGATCTGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR GCA 72 bp | TGTTCGTGCGTGTGCGGTCTGTGTGTGTGCTATATGTaGTCAGCATTGTTTTGGCCTCAGCATTTTCTCCCT | + |
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Preference number: 3 (lower is better) Translates to: CSCVCGLCVCYM*SALFWPQHFLP Trigger: AGGGAGAAAATGCTGAGGCCAAAACAATGCTGAGCACATATAGCACACACACAGACCGCACACGCACGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR GCA 72 bp | ACACTAAGACTTTGGCATTTACGACGACACAGGTTTTaGGTTGCTAACCAGGGCAAAGGTGCGTCTTCAGCT | + |
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Preference number: 3 (lower is better) Translates to: TLRLWHLRRHRF*VANQGKGASSA Trigger: AGCTGAAGACGCACCTTTGCCCTGGTTAGCAACGCAAAACCTGTGTCGTCGTAAATGCCAAAGTCTTAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
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| 3UTR CCA 72 bp | GTGAACCCTGTTACTCACAGTGTGAGATGGTGTGGGTaGAGAGTCAGACTCTTCAGAAGTGTCTTTGGTGAA | + |
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Preference number: 3 (lower is better) Translates to: VNPVTHSVRWCG*RVRLFRSVFGE Trigger: TTCACCAAAGACACTTCTGAAGAGTCTGACTCTCCACCCACACCATCTCACACTGTGAGTAACAGGGTTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR CCA 72 bp | GGTCTGTGTGTGTGCTATATGTGCTCAGCATTGTTTTaGCCTCAGCATTTTCTCCCTTCGCTGCTCTATCTG | + |
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Preference number: 3 (lower is better) Translates to: GLCVCYMCSALF*PQHFLPSLLYL Trigger: CAGATAGAGCAGCGAAGGGAGAAAATGCTGAGGCCAAAACAATGCTGAGCACATATAGCACACACACAGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR CCA 72 bp | AAACTGCTGAAGAATGTTGCAGCCCTCCAAAAGCAGTaGGAAACCGGTAGTCATGTGTGTTCCGACCCATTT | + |
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Preference number: 3 (lower is better) Translates to: KLLKNVAALQKQ*ETGSHVCSDPF Trigger: AAATGGGTCGGAACACACATGACTACCGGTTTCCCACTGCTTTTGGAGGGCTGCAACATTCTTCAGCAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR TCA 72 bp | AAACTTACTAGAGAAGGAGGTAACATTCAATCGAGATaGAAACTGTCCTCAGATCTGTCTACGAGTCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: KLTREGGNIQSR*KLSSDLSTSQQ Trigger: CTGCTGACTCGTAGACAGATCTGAGGACAGTTTTCATCTCGATTGAATGTTACCTCCTTCTCTAGTAAGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR CCA 72 bp | AGGTGCGTCTTCAGCTTTACTGTAATCTTAATACTTTaGAGTTGCTGCATTGTATCTGCAGATGAGAAGCAG | + |
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Preference number: 3 (lower is better) Translates to: RCVFSFTVILIL*SCCIVSADEKQ Trigger: CTGCTTCTCATCTGCAGATACAATGCAGCAACTCCAAAGTATTAAGATTACAGTAAAGCTGAAGACGCACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR TCA 72 bp | GCGCTTCTGGTTCTTCAAGCTCAGAGTGTTGCTCACTaGTCCAACAAATACTTGCTTTTGTTTATTATGCAA | + |
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Preference number: 3 (lower is better) Translates to: ALLVLQAQSVAH*SNKYLLLFIMQ Trigger: TTGCATAATAAACAAAAGCAAGTATTTGTTGGATCAGTGAGCAACACTCTGAGCTTGAAGAACCAGAAGCGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| 3UTR TCA 72 bp | CACACACTTTGCTCTATAAAAGAACAGCCTCTAGGTTaGCAGGAAACTATTCTACTTTTCATAGTCAACTGT | + |
|
Preference number: 3 (lower is better) Translates to: HTLCSIKEQPLG*QETILLFIVNC Trigger: ACAGTTGACTATGAAAAGTAGAATAGTTTCCTGTCAACCTAGAGGCTGTTCTTTTATAGAGCAAAGTGTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
||
| 3UTR GCA 72 bp | TTCAGCTTTACTGTAATCTTAATACTTTGGAGTTGCTaGATTGTATCTGCAGATGAGAAGCAGAACCTATCA | + |
|
Preference number: 3 (lower is better) Translates to: FSFTVILILWSC*IVSADEKQNLS Trigger: TGATAGGTTCTGCTTCTCATCTGCAGATACAATGCAGCAACTCCAAAGTATTAAGATTACAGTAAAGCTGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
||
| 3UTR TCA 72 bp | GATCCAACAAATACTTGCTTTTGTTTATTATGCAAGTaGTCTGGATACAAACCAGTCACAACTCACAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: DPTNTCFCLLCK*SGYKPVTTHKT Trigger: TGTCTTGTGAGTTGTGACTGGTTTGTATCCAGATCACTTGCATAATAAACAAAAGCAAGTATTTGTTGGATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
||
| CDS-3UTR TCA 90 bp | CATTTACGACGACACAGGTTTTGCGTTGCTAACCAGGGCAAAGGTGCGTCTTCAGCGACTGGGCAGGGCTaGCATCTGGAGTTGACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: HLRRHRFCVANQGKGASSATGQG*HLELTK Trigger: CTTTGTCAACTCCAGATGTCAGCCCTGCCCAGTCGC...TGAAGACGCACCTTTGCCCTGGTTAGCAACGCAAAACCTGTGTCGTCGTAAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
||
| CDS-3UTR TCA 90 bp | ATGCAGATCTTCCGAGCACGTGTGCTAAGGGCCAGCCAGCCATGCAACAGTGCTTCTTTCAAAAGCCTCTaGTTTTCCCGGTCAATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: MQIFRARVLRASQPCNSASFKSL*FSRSIC Trigger: ACAGATTGACCGGGAAAATCAGAGGCTTTTGAAAGA...AGCACTGTTGCATGGCTGGCTGGCCCTTAGCACACGTGCTCGGAAGATCTGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
||
| CDS-3UTR TCA 90 bp | CTAAGTCAGCTTCTCCATGGAAGCAGACGTCAAAGCGTTTTCATAAGGAGTCTAGCGACTGGGCAGGGCTaGCATCTGGAGTTGACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSQLLHGSRRQSVFIRSLATGQG*HLELTK Trigger: CTTTGTCAACTCCAGATGTCAGCCCTGCCCAGTCGC...TAGACTCCTTATGAAAACGCTTTGACGTCTGCTTCCATGGAGAAGCTGACTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
||
| CDS-3UTR CCA 90 bp | GCAGTGAGCTCATTCGCTGTGACGGTGTACAGACATTTACACACTAAGACTTTGTTGCACTGGATGTCCTaGAAGCTCCTCTCAGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: AVSSFAVTVYRHLHTKTLLHWMS*KLLSVG Trigger: GCCCACTGAGAGGAGCTTCCAGGACATCCAGTGCAA...CAAAGTCTTAGTGTGTAAATGTCTGTACACCGTCACAGCGAATGAGCTCACTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
||
| 3UTR CAA 72 bp | GGTGTGGGTGGAGAGTCAGACTCTTCAGAAGTGTCTTaGGTGAATCAGGGATTGCACAGTACAAGCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GVGGESDSSEVS*VNQGLHSTSSS Trigger: TGAGGAGCTTGTACTGTGCAATCCCTGATTCACCAAAGACACTTCTGAAGAGTCTGACTCTCCACCCACACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
||
| CDS-3UTR GCA 90 bp | CATTTACGACGACACAGGTTTTGCGTTGCTAACCAGGGCAAAGGTGCGTCTTCAGACTCAGATCTCCTTTaGCTGTCAGACCCCATATCT | + |
|
Preference number: 4 (lower is better) Translates to: HLRRHRFCVANQGKGASSDSDLL*LSDPIS Trigger: AGATATGGGGTCTGACAGGCAAAGGAGATCTGAGTC...TGAAGACGCACCTTTGCCCTGGTTAGCAACGCAAAACCTGTGTCGTCGTAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
||
| CDS-3UTR GCA 90 bp | GACACAGGTTTTGCGTTGCTAACCAGGGCAAAGGTGCGTCTTCAGCTTTACTGTGACTCAGATCTCCTTTaGCTGTCAGACCCCATATCT | + |
|
Preference number: 4 (lower is better) Translates to: DTGFALLTRAKVRLQLYCDSDLL*LSDPIS Trigger: AGATATGGGGTCTGACAGGCAAAGGAGATCTGAGTC...ACAGTAAAGCTGAAGACGCACCTTTGCCCTGGTTAGCAACGCAAAACCTGTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
||
| CDS-3UTR CCA 90 bp | AACTCGGCCATTAGCAGTGAGCTCATTCGCTGTGACGGTGTACAGACATTTACAGGAAGCTCCTCTCAGTaGGCTATAATGGCCAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: NSAISSELIRCDGVQTFTGSSSQ*AIMAKS Trigger: ACTCTTGGCCATTATAGCCCACTGAGAGGAGCTTCC...TGTAAATGTCTGTACACCGTCACAGCGAATGAGCTCACTGCTAATGGCCGAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
||
| CDS-3UTR TCA 90 bp | AGCAACTCGGCCATTAGCAGTGAGCTCATTCGCTGTGACGGTGTACAGACATTTGTCTACTTCACCTTCTaGGATATCTCCAAACCGATC | + |
|
Preference number: 4 (lower is better) Translates to: SNSAISSELIRCDGVQTFVYFTF*DISKPI Trigger: GATCGGTTTGGAGATATCTCAGAAGGTGAAGTAGAC...AAATGTCTGTACACCGTCACAGCGAATGAGCTCACTGCTAATGGCCGAGTTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
||
| CDS-3UTR TCA 90 bp | CATTTACGACGACACAGGTTTTGCGTTGCTAACCAGGGCAAAGGTGCGTCTTCAGTCTACTTCACCTTCTaGGATATCTCCAAACCGATC | + |
|
Preference number: 4 (lower is better) Translates to: HLRRHRFCVANQGKGASSVYFTF*DISKPI Trigger: GATCGGTTTGGAGATATCTCAGAAGGTGAAGTAGAC...TGAAGACGCACCTTTGCCCTGGTTAGCAACGCAAAACCTGTGTCGTCGTAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
||
| CDS-3UTR TCA 90 bp | GACACAGGTTTTGCGTTGCTAACCAGGGCAAAGGTGCGTCTTCAGCTTTACTGTGTCTACTTCACCTTCTaGGATATCTCCAAACCGATC | + |
|
Preference number: 4 (lower is better) Translates to: DTGFALLTRAKVRLQLYCVYFTF*DISKPI Trigger: GATCGGTTTGGAGATATCTCAGAAGGTGAAGTAGAC...ACAGTAAAGCTGAAGACGCACCTTTGCCCTGGTTAGCAACGCAAAACCTGTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
||
| CDS-3UTR CCA 90 bp | ACGGTGTACAGACATTTACACACTAAGACTTTGGCATTTACGACGACACAGGTTTTGCACTGGATGTCCTaGAAGCTCCTCTCAGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TVYRHLHTKTLAFTTTQVLHWMS*KLLSVG Trigger: GCCCACTGAGAGGAGCTTCCAGGACATCCAGTGCAA...AACCTGTGTCGTCGTAAATGCCAAAGTCTTAGTGTGTAAATGTCTGTACACCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
||
| CDS-3UTR CCA 90 bp | TTATTCATGAAAATAAGCAACTCGGCCATTAGCAGTGAGCTCATTCGCTGTGACTTGCACTGGATGTCCTaGAAGCTCCTCTCAGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LFMKISNSAISSELIRCDLHWMS*KLLSVG Trigger: GCCCACTGAGAGGAGCTTCCAGGACATCCAGTGCAA...GTCACAGCGAATGAGCTCACTGCTAATGGCCGAGTTGCTTATTTTCATGAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
||
| CDS-3UTR TCA 90 bp | AGCAACTCGGCCATTAGCAGTGAGCTCATTCGCTGTGACGGTGTACAGACATTTTTAACTTTTACTTTTTaGTCAGGCGGTTGGCCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SNSAISSELIRCDGVQTFLTFTF*SGGWPN Trigger: GTTGGGCCAACCGCCTGATCAAAAAGTAAAAGTTAA...AAATGTCTGTACACCGTCACAGCGAATGAGCTCACTGCTAATGGCCGAGTTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
||
| CDS-3UTR GCA 90 bp | CATTTACGACGACACAGGTTTTGCGTTGCTAACCAGGGCAAAGGTGCGTCTTCACGGGAATTGTACTTTTaGTTCCTGGTTTTTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HLRRHRFCVANQGKGASSRELYF*FLVFQP Trigger: AGGCTGAAAAACCAGGAAGCAAAAGTACAATTCCCG...TGAAGACGCACCTTTGCCCTGGTTAGCAACGCAAAACCTGTGTCGTCGTAAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
||
| CDS-3UTR TCA 90 bp | CTGCATGGTGTTACTTTACAAGCAAAGCACAGCGTTAGTGGAGTAGCCGTGAGATTAACTTTTACTTTTTaGTCAGGCGGTTGGCCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LHGVTLQAKHSVSGVAVRLTFTF*SGGWPN Trigger: GTTGGGCCAACCGCCTGATCAAAAAGTAAAAGTTAA...TCTCACGGCTACTCCACTAACGCTGTGCTTTGCTTGTAAAGTAACACCATGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
||
| CDS-3UTR TCA 90 bp | AACTCGGCCATTAGCAGTGAGCTCATTCGCTGTGACGGTGTACAGACATTTACATCTTTCAAAAGCCTCTaGTTTTCCCGGTCAATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NSAISSELIRCDGVQTFTSFKSL*FSRSIC Trigger: ACAGATTGACCGGGAAAATCAGAGGCTTTTGAAAGA...TGTAAATGTCTGTACACCGTCACAGCGAATGAGCTCACTGCTAATGGCCGAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
||
| CDS-3UTR GCA 90 bp | AAAATAAGCAACTCGGCCATTAGCAGTGAGCTCATTCGCTGTGACGGTGTACAGCGGGAATTGTACTTTTaGTTCCTGGTTTTTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KISNSAISSELIRCDGVQRELYF*FLVFQP Trigger: AGGCTGAAAAACCAGGAAGCAAAAGTACAATTCCCG...CTGTACACCGTCACAGCGAATGAGCTCACTGCTAATGGCCGAGTTGCTTATTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
||
| CDS-3UTR CCA 90 bp | CTGCATGGTGTTACTTTACAAGCAAAGCACAGCGTTAGTGGAGTAGCCGTGAGACTGTCAAAGAAAGAGTaGTCTACTTCACCTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LHGVTLQAKHSVSGVAVRLSKKE*STSPSE Trigger: CTCAGAAGGTGAAGTAGACCACTCTTTCTTTGACAG...TCTCACGGCTACTCCACTAACGCTGTGCTTTGCTTGTAAAGTAACACCATGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
||
| CDS-3UTR CCA 90 bp | TCATTCGCTGTGACGGTGTACAGACATTTACACACTAAGACTTTGGCATTTACGGGAAGCTCCTCTCAGTaGGCTATAATGGCCAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SFAVTVYRHLHTKTLAFTGSSSQ*AIMAKS Trigger: ACTCTTGGCCATTATAGCCCACTGAGAGGAGCTTCC...CGTAAATGCCAAAGTCTTAGTGTGTAAATGTCTGTACACCGTCACAGCGAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
||
| CDS-3UTR GCA 90 bp | TTCAAATGTGAGAATGGTAAGAATGGTGCTTCTAGGATTCAGCCAAACCAAAGCGACTCAGATCTCCTTTaGCTGTCAGACCCCATATCT | + |
|
Preference number: 4 (lower is better) Translates to: FKCENGKNGASRIQPNQSDSDLL*LSDPIS Trigger: AGATATGGGGTCTGACAGGCAAAGGAGATCTGAGTC...GCTTTGGTTTGGCTGAATCCTAGAAGCACCATTCTTACCATTCTCACATTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
||
| CDS-3UTR TCA 90 bp | AGCTCATTCGCTGTGACGGTGTACAGACATTTACACACTAAGACTTTGGCATTTTTAACTTTTACTTTTTaGTCAGGCGGTTGGCCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSFAVTVYRHLHTKTLAFLTFTF*SGGWPN Trigger: GTTGGGCCAACCGCCTGATCAAAAAGTAAAAGTTAA...AAATGCCAAAGTCTTAGTGTGTAAATGTCTGTACACCGTCACAGCGAATGAGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
||
| CDS-3UTR TCA 90 bp | AGCTCATTCGCTGTGACGGTGTACAGACATTTACACACTAAGACTTTGGCATTTTCTTTCAAAAGCCTCTaGTTTTCCCGGTCAATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSFAVTVYRHLHTKTLAFSFKSL*FSRSIC Trigger: ACAGATTGACCGGGAAAATCAGAGGCTTTTGAAAGA...AAATGCCAAAGTCTTAGTGTGTAAATGTCTGTACACCGTCACAGCGAATGAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
||
| CDS-3UTR GCA 90 bp | ATGAAAATAAGCAACTCGGCCATTAGCAGTGAGCTCATTCGCTGTGACGGTGTACCCTTTTTATCTAACTaGAGGAAAGCTTTCAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: MKISNSAISSELIRCDGVPFLSN*RKAFNR Trigger: TCTGTTGAAAGCTTTCCTGCAGTTAGATAAAAAGGG...TACACCGTCACAGCGAATGAGCTCACTGCTAATGGCCGAGTTGCTTATTTTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
||
| CDS-3UTR GCA 90 bp | TCATTCGCTGTGACGGTGTACAGACATTTACACACTAAGACTTTGGCATTTACGCGGGAATTGTACTTTTaGTTCCTGGTTTTTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SFAVTVYRHLHTKTLAFTRELYF*FLVFQP Trigger: AGGCTGAAAAACCAGGAAGCAAAAGTACAATTCCCG...CGTAAATGCCAAAGTCTTAGTGTGTAAATGTCTGTACACCGTCACAGCGAATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
||
| CDS-3UTR CCA 90 bp | GTGTACAGACATTTACACACTAAGACTTTGGCATTTACGACGACACAGGTTTTGCTGTCAAAGAAAGAGTaGTCTACTTCACCTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VYRHLHTKTLAFTTTQVLLSKKE*STSPSE Trigger: CTCAGAAGGTGAAGTAGACCACTCTTTCTTTGACAG...CAAAACCTGTGTCGTCGTAAATGCCAAAGTCTTAGTGTGTAAATGTCTGTACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
||
| 3UTR CAA 72 bp | GTCTTGGCTTCAACACAGATTGTCACCACTGCTGCTTaGTCAGCACAACTGAGTTTCTATATTGAAGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: VLASTQIVTTAA*SAQLSFYIEEI Trigger: TATTTCTTCAATATAGAAACTCAGTTGTGCTGACAAAGCAGCAGTGGTGACAATCTGTGTTGAAGCCAAGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
||
| CDS-3UTR GCA 90 bp | TCTTTATTCATGAAAATAAGCAACTCGGCCATTAGCAGTGAGCTCATTCGCTGTCCCTTTTTATCTAACTaGAGGAAAGCTTTCAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLFMKISNSAISSELIRCPFLSN*RKAFNR Trigger: TCTGTTGAAAGCTTTCCTGCAGTTAGATAAAAAGGG...ACAGCGAATGAGCTCACTGCTAATGGCCGAGTTGCTTATTTTCATGAATAAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
||
| CDS-3UTR CCA 90 bp | GAAAAGGTTATGACTATGAAATGTCACACACTTTGCTCTATAAAAGAACAGCCTCTGTCAAAGAAAGAGTaGTCTACTTCACCTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: EKVMTMKCHTLCSIKEQPLSKKE*STSPSE Trigger: CTCAGAAGGTGAAGTAGACCACTCTTTCTTTGACAG...AGGCTGTTCTTTTATAGAGCAAAGTGTGTGACATTTCATAGTCATAACCTTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
||
| 3UTR CAA 72 bp | TCACACACTTTGCTCTATAAAAGAACAGCCTCTAGGTaGACAGGAAACTATTCTACTTTTCATAGTCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: SHTLLYKRTASR*TGNYSTFHSQL Trigger: CAGTTGACTATGAAAAGTAGAATAGTTTCCTGTCAACCTAGAGGCTGTTCTTTTATAGAGCAAAGTGTGTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
||
| CDS TCA 90 bp | CGGTTGGCCCAACTCAAGCGACTGGGCAGGGCTGACATCTGGAGTTaGCAAAGGAGTTATGTCTGGTACATTGCCTTCGGACTCATGATA | + |
|
Preference number: 5 (lower is better) Translates to: RLAQLKRLGRADIWS*QRSYVWYIAFGLMI Trigger: TATCATGAGTCCGAAGGCAATGTACCAGACATAACTCCTTTGTCAACTCCAGATGTCAGCCCTGCCCAGTCGCTTGAGTTGGGCCAACCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000145229.2 ENSMUST00000164504.2 |
||
| CDS TCA 90 bp | CTTTTTGATCAGGCGGTTGGCCCAACTCAAGCGACTGGGCAGGGCTaGCATCTGGAGTTGACAAAGGAGTTATGTCTGGTACATTGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LFDQAVGPTQATGQG*HLELTKELCLVHCL Trigger: AAGGCAATGTACCAGACATAACTCCTTTGTCAACTCCAGATGTCAGCCCTGCCCAGTCGCTTGAGTTGGGCCAACCGCCTGATCAAAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000145229.2 ENSMUST00000164504.2 |
||
| CDS-3UTR CAA 90 bp | CATTTACGACGACACAGGTTTTGCGTTGCTAACCAGGGCAAAGGTGCGTCTTCAAAGTTGCTAGAGGGCTaGGCTGACTTAGACCTCACG | + |
|
Preference number: 5 (lower is better) Translates to: HLRRHRFCVANQGKGASSKLLEG*ADLDLT Trigger: CGTGAGGTCTAAGTCAGCCAAGCCCTCTAGCAACTT...TGAAGACGCACCTTTGCCCTGGTTAGCAACGCAAAACCTGTGTCGTCGTAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
||
| CDS-3UTR CAA 90 bp | GCAGCTTCTGAAGTGAACCCTGTTACTCACAGTGTGAGATGGTGTGGGTGGAGACTGAGCAGTCTGAGTTaGATCTTGAAGATGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: AASEVNPVTHSVRWCGWRLSSLS*ILKMRK Trigger: CTTCCTCATCTTCAAGATCAAACTCAGACTGCTCAG...TCTCCACCCACACCATCTCACACTGTGAGTAACAGGGTTCACTTCAGAAGCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
||
| CDS-3UTR CAA 90 bp | CGTGTGCGGTCTGTGTGTGTGCTATATGTGCTCAGCATTGTTTTGGCCTCAGCACTGAGCAGTCTGAGTTaGATCTTGAAGATGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RVRSVCVLYVLSIVLASALSSLS*ILKMRK Trigger: CTTCCTCATCTTCAAGATCAAACTCAGACTGCTCAG...TGCTGAGGCCAAAACAATGCTGAGCACATATAGCACACACACAGACCGCACACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
||
| CDS-3UTR CAA 90 bp | GCAGTGAGCTCATTCGCTGTGACGGTGTACAGACATTTACACACTAAGACTTTGTTTTTGATCAGGCGGTaGGCCCAACTCAAGCGACTG | + |
|
Preference number: 5 (lower is better) Translates to: AVSSFAVTVYRHLHTKTLFLIRR*AQLKRL Trigger: CAGTCGCTTGAGTTGGGCCAACCGCCTGATCAAAAA...CAAAGTCTTAGTGTGTAAATGTCTGTACACCGTCACAGCGAATGAGCTCACTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
||
| CDS-3UTR CAA 90 bp | AGCAACTCGGCCATTAGCAGTGAGCTCATTCGCTGTGACGGTGTACAGACATTTCCGGGAATTGTACTTTaGCTTCCTGGTTTTTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SNSAISSELIRCDGVQTFPGIVL*LPGFSA Trigger: GGCTGAAAAACCAGGAAGCAAAAGTACAATTCCCGG...AAATGTCTGTACACCGTCACAGCGAATGAGCTCACTGCTAATGGCCGAGTTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
||
| CDS-3UTR CAA 90 bp | CATTTACGACGACACAGGTTTTGCGTTGCTAACCAGGGCAAAGGTGCGTCTTCACTGAGCAGTCTGAGTTaGATCTTGAAGATGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: HLRRHRFCVANQGKGASSLSSLS*ILKMRK Trigger: CTTCCTCATCTTCAAGATCAAACTCAGACTGCTCAG...TGAAGACGCACCTTTGCCCTGGTTAGCAACGCAAAACCTGTGTCGTCGTAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
||
| CDS-3UTR CAA 90 bp | TCTTGCCTCAGAATCCTTAAGAGTATTTTACCAGACGGCATAGAGAGCAGCTTCTTTTTGATCAGGCGGTaGGCCCAACTCAAGCGACTG | + |
|
Preference number: 5 (lower is better) Translates to: SCLRILKSILPDGIESSFFLIRR*AQLKRL Trigger: CAGTCGCTTGAGTTGGGCCAACCGCCTGATCAAAAA...GAAGCTGCTCTCTATGCCGTCTGGTAAAATACTCTTAAGGATTCTGAGGCAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
||
| CDS-3UTR CAA 90 bp | AGCTCATTCGCTGTGACGGTGTACAGACATTTACACACTAAGACTTTGGCATTTAAGTTGCTAGAGGGCTaGGCTGACTTAGACCTCACG | + |
|
Preference number: 5 (lower is better) Translates to: SSFAVTVYRHLHTKTLAFKLLEG*ADLDLT Trigger: CGTGAGGTCTAAGTCAGCCAAGCCCTCTAGCAACTT...AAATGCCAAAGTCTTAGTGTGTAAATGTCTGTACACCGTCACAGCGAATGAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
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| CDS-3UTR CAA 90 bp | AACTCGGCCATTAGCAGTGAGCTCATTCGCTGTGACGGTGTACAGACATTTACAATAGTCACCAGTCTTTaGTTTAGTGCTGGAAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: NSAISSELIRCDGVQTFTIVTSL*FSAGRL Trigger: CAGCCTTCCAGCACTAAACAAAAGACTGGTGACTAT...TGTAAATGTCTGTACACCGTCACAGCGAATGAGCTCACTGCTAATGGCCGAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
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| CDS-3UTR CAA 90 bp | GACACAGGTTTTGCGTTGCTAACCAGGGCAAAGGTGCGTCTTCAGCTTTACTGTGTTTTTCAGCCTGTCTaGACAGTTCTTTCAAAAGCC | + |
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Preference number: 5 (lower is better) Translates to: DTGFALLTRAKVRLQLYCVFQPV*TVLSKA Trigger: GGCTTTTGAAAGAACTGTCAAGACAGGCTGAAAAAC...ACAGTAAAGCTGAAGACGCACCTTTGCCCTGGTTAGCAACGCAAAACCTGTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| CDS GCA 90 bp | ACACTAGAAACACACTTCCCTGATGAGTGTGACTCAGATCTCCTTTaGCTGTCAGACCCCATATCTGAGCAGTCTGAGTTTGATCTTGAA | + |
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Preference number: 5 (lower is better) Translates to: TLETHFPDECDSDLL*LSDPISEQSEFDLE Trigger: TTCAAGATCAAACTCAGACTGCTCAGATATGGGGTCTGACAGGCAAAGGAGATCTGAGTCACACTCATCAGGGAAGTGTGTTTCTAGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000145229.2 ENSMUST00000164504.2 |
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| CDS-3UTR CAA 90 bp | TTCAAATGTGAGAATGGTAAGAATGGTGCTTCTAGGATTCAGCCAAACCAAAGCAAGTTGCTAGAGGGCTaGGCTGACTTAGACCTCACG | + |
|
Preference number: 5 (lower is better) Translates to: FKCENGKNGASRIQPNQSKLLEG*ADLDLT Trigger: CGTGAGGTCTAAGTCAGCCAAGCCCTCTAGCAACTT...GCTTTGGTTTGGCTGAATCCTAGAAGCACCATTCTTACCATTCTCACATTTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| CDS-3UTR CAA 90 bp | ATGAAAATAAGCAACTCGGCCATTAGCAGTGAGCTCATTCGCTGTGACGGTGTATGGAAGGCTGTGCACTaGATTTTCTTCCTGACTTAC | + |
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Preference number: 5 (lower is better) Translates to: MKISNSAISSELIRCDGVWKAVH*IFFLTY Trigger: GTAAGTCAGGAAGAAAATCAAGTGCACAGCCTTCCA...TACACCGTCACAGCGAATGAGCTCACTGCTAATGGCCGAGTTGCTTATTTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
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| CDS-3UTR CAA 90 bp | GCAGTGAGCTCATTCGCTGTGACGGTGTACAGACATTTACACACTAAGACTTTGATAGTCACCAGTCTTTaGTTTAGTGCTGGAAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AVSSFAVTVYRHLHTKTLIVTSL*FSAGRL Trigger: CAGCCTTCCAGCACTAAACAAAAGACTGGTGACTAT...CAAAGTCTTAGTGTGTAAATGTCTGTACACCGTCACAGCGAATGAGCTCACTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
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| CDS-3UTR CAA 90 bp | CGTGTGCGGTCTGTGTGTGTGCTATATGTGCTCAGCATTGTTTTGGCCTCAGCAATCTACGGTCTAGATTaGCATCTAACACTGAAGATT | + |
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Preference number: 5 (lower is better) Translates to: RVRSVCVLYVLSIVLASAIYGLD*HLTLKI Trigger: AATCTTCAGTGTTAGATGCAAATCTAGACCGTAGAT...TGCTGAGGCCAAAACAATGCTGAGCACATATAGCACACACACAGACCGCACACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| CDS-3UTR CAA 90 bp | CTAAGTCAGCTTCTCCATGGAAGCAGACGTCAAAGCGTTTTCATAAGGAGTCTACCGGGAATTGTACTTTaGCTTCCTGGTTTTTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LSQLLHGSRRQSVFIRSLPGIVL*LPGFSA Trigger: GGCTGAAAAACCAGGAAGCAAAAGTACAATTCCCGG...TAGACTCCTTATGAAAACGCTTTGACGTCTGCTTCCATGGAGAAGCTGACTTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| CDS-3UTR CAA 90 bp | TCTTGCCTCAGAATCCTTAAGAGTATTTTACCAGACGGCATAGAGAGCAGCTTCCCGGGAATTGTACTTTaGCTTCCTGGTTTTTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SCLRILKSILPDGIESSFPGIVL*LPGFSA Trigger: GGCTGAAAAACCAGGAAGCAAAAGTACAATTCCCGG...GAAGCTGCTCTCTATGCCGTCTGGTAAAATACTCTTAAGGATTCTGAGGCAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| CDS GCA 90 bp | AACTCATATTCCGATGGTAGTCCATCAGCTGTTCAGAGCGTTTCATaGCAACTGTTGGCTTCACAGCTTCAAGTCGTTTCAATAAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: NSYSDGSPSAVQSVS*QLLASQLQVVSIKP Trigger: TGGCTTTATTGAAACGACTTGAAGCTGTGAAGCCAACAGTTGGCATGAAACGCTCTGAACAGCTGATGGACTACCATCGGAATATGAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
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| CDS-3UTR CAA 90 bp | TCATTCGCTGTGACGGTGTACAGACATTTACACACTAAGACTTTGGCATTTACGTGGAAGGCTGTGCACTaGATTTTCTTCCTGACTTAC | + |
|
Preference number: 5 (lower is better) Translates to: SFAVTVYRHLHTKTLAFTWKAVH*IFFLTY Trigger: GTAAGTCAGGAAGAAAATCAAGTGCACAGCCTTCCA...CGTAAATGCCAAAGTCTTAGTGTGTAAATGTCTGTACACCGTCACAGCGAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
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| CDS-3UTR CAA 90 bp | TTATTCATGAAAATAAGCAACTCGGCCATTAGCAGTGAGCTCATTCGCTGTGACTCTTTCGATCCTTTGTaGTTCCCTCTGTCTGTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LFMKISNSAISSELIRCDSFDPL*FPLSVE Trigger: CTCAACAGACAGAGGGAACAACAAAGGATCGAAAGA...GTCACAGCGAATGAGCTCACTGCTAATGGCCGAGTTGCTTATTTTCATGAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
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| CDS-3UTR CAA 90 bp | AGCTCATTCGCTGTGACGGTGTACAGACATTTACACACTAAGACTTTGGCATTTTCTTTCGATCCTTTGTaGTTCCCTCTGTCTGTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSFAVTVYRHLHTKTLAFSFDPL*FPLSVE Trigger: CTCAACAGACAGAGGGAACAACAAAGGATCGAAAGA...AAATGCCAAAGTCTTAGTGTGTAAATGTCTGTACACCGTCACAGCGAATGAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
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| CDS-3UTR CAA 90 bp | TCTTGCCTCAGAATCCTTAAGAGTATTTTACCAGACGGCATAGAGAGCAGCTTCTTCTCTTTCGATCCTTaGTTGTTCCCTCTGTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SCLRILKSILPDGIESSFFSFDP*LFPLSV Trigger: AACAGACAGAGGGAACAACAAAGGATCGAAAGAGAA...GAAGCTGCTCTCTATGCCGTCTGGTAAAATACTCTTAAGGATTCTGAGGCAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| CDS-3UTR CAA 90 bp | CTAAGTCAGCTTCTCCATGGAAGCAGACGTCAAAGCGTTTTCATAAGGAGTCTATTCTCTTTCGATCCTTaGTTGTTCCCTCTGTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LSQLLHGSRRQSVFIRSLFSFDP*LFPLSV Trigger: AACAGACAGAGGGAACAACAAAGGATCGAAAGAGAA...TAGACTCCTTATGAAAACGCTTTGACGTCTGCTTCCATGGAGAAGCTGACTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| CDS-3UTR CAA 90 bp | AGCTCATTCGCTGTGACGGTGTACAGACATTTACACACTAAGACTTTGGCATTTAGTCTGAGTTTGATCTaGAAGATGAGGAAGACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSFAVTVYRHLHTKTLAFSLSLI*KMRKTR Trigger: CCTTGTCTTCCTCATCTTCAAGATCAAACTCAGACT...AAATGCCAAAGTCTTAGTGTGTAAATGTCTGTACACCGTCACAGCGAATGAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
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| CDS-3UTR CAA 90 bp | TCATTCGCTGTGACGGTGTACAGACATTTACACACTAAGACTTTGGCATTTACGAGTCTGAGTTTGATCTaGAAGATGAGGAAGACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SFAVTVYRHLHTKTLAFTSLSLI*KMRKTR Trigger: CCTTGTCTTCCTCATCTTCAAGATCAAACTCAGACT...CGTAAATGCCAAAGTCTTAGTGTGTAAATGTCTGTACACCGTCACAGCGAATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
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| CDS-3UTR CAA 90 bp | GTGTACAGACATTTACACACTAAGACTTTGGCATTTACGACGACACAGGTTTTGTGGAAGGCTGTGCACTaGATTTTCTTCCTGACTTAC | + |
|
Preference number: 5 (lower is better) Translates to: VYRHLHTKTLAFTTTQVLWKAVH*IFFLTY Trigger: GTAAGTCAGGAAGAAAATCAAGTGCACAGCCTTCCA...CAAAACCTGTGTCGTCGTAAATGCCAAAGTCTTAGTGTGTAAATGTCTGTACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
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| CDS-3UTR CAA 90 bp | GAAAAGGTTATGACTATGAAATGTCACACACTTTGCTCTATAAAAGAACAGCCTTTTTTGATCAGGCGGTaGGCCCAACTCAAGCGACTG | + |
|
Preference number: 5 (lower is better) Translates to: EKVMTMKCHTLCSIKEQPFLIRR*AQLKRL Trigger: CAGTCGCTTGAGTTGGGCCAACCGCCTGATCAAAAA...AGGCTGTTCTTTTATAGAGCAAAGTGTGTGACATTTCATAGTCATAACCTTTTC 42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| CDS-3UTR CAA 90 bp | GCAGTGAGCTCATTCGCTGTGACGGTGTACAGACATTTACACACTAAGACTTTGATCTACGGTCTAGATTaGCATCTAACACTGAAGATT | + |
|
Preference number: 5 (lower is better) Translates to: AVSSFAVTVYRHLHTKTLIYGLD*HLTLKI Trigger: AATCTTCAGTGTTAGATGCAAATCTAGACCGTAGAT...CAAAGTCTTAGTGTGTAAATGTCTGTACACCGTCACAGCGAATGAGCTCACTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
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| CDS-3UTR CAA 90 bp | ACGGTGTACAGACATTTACACACTAAGACTTTGGCATTTACGACGACACAGGTTGTTTTTCAGCCTGTCTaGACAGTTCTTTCAAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TVYRHLHTKTLAFTTTQVVFQPV*TVLSKA Trigger: GGCTTTTGAAAGAACTGTCAAGACAGGCTGAAAAAC...AACCTGTGTCGTCGTAAATGCCAAAGTCTTAGTGTGTAAATGTCTGTACACCGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
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| CDS-3UTR CAA 90 bp | TTCAAATGTGAGAATGGTAAGAATGGTGCTTCTAGGATTCAGCCAAACCAAAGCTCTTTCGATCCTTTGTaGTTCCCTCTGTCTGTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: FKCENGKNGASRIQPNQSSFDPL*FPLSVE Trigger: CTCAACAGACAGAGGGAACAACAAAGGATCGAAAGA...GCTTTGGTTTGGCTGAATCCTAGAAGCACCATTCTTACCATTCTCACATTTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| CDS-3UTR CAA 90 bp | TTATTCATGAAAATAAGCAACTCGGCCATTAGCAGTGAGCTCATTCGCTGTGACTTCTCTTTCGATCCTTaGTTGTTCCCTCTGTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LFMKISNSAISSELIRCDFSFDP*LFPLSV Trigger: AACAGACAGAGGGAACAACAAAGGATCGAAAGAGAA...GTCACAGCGAATGAGCTCACTGCTAATGGCCGAGTTGCTTATTTTCATGAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
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| CDS-3UTR CAA 90 bp | TCATTCGCTGTGACGGTGTACAGACATTTACACACTAAGACTTTGGCATTTACGTTTAACTTTTACTTTTaGATCAGGCGGTTGGCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: SFAVTVYRHLHTKTLAFTFNFYF*IRRLAQ Trigger: TTGGGCCAACCGCCTGATCAAAAAGTAAAAGTTAAA...CGTAAATGCCAAAGTCTTAGTGTGTAAATGTCTGTACACCGTCACAGCGAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
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| CDS-3UTR CAA 90 bp | TTATTCATGAAAATAAGCAACTCGGCCATTAGCAGTGAGCTCATTCGCTGTGACTTTAACTTTTACTTTTaGATCAGGCGGTTGGCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: LFMKISNSAISSELIRCDFNFYF*IRRLAQ Trigger: TTGGGCCAACCGCCTGATCAAAAAGTAAAAGTTAAA...GTCACAGCGAATGAGCTCACTGCTAATGGCCGAGTTGCTTATTTTCATGAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
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| CDS-3UTR CAA 90 bp | GTGTACAGACATTTACACACTAAGACTTTGGCATTTACGACGACACAGGTTTTGGTTTTTCAGCCTGTCTaGACAGTTCTTTCAAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: VYRHLHTKTLAFTTTQVLVFQPV*TVLSKA Trigger: GGCTTTTGAAAGAACTGTCAAGACAGGCTGAAAAAC...CAAAACCTGTGTCGTCGTAAATGCCAAAGTCTTAGTGTGTAAATGTCTGTACAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
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| CDS-3UTR CAA 90 bp | TTCAAATGTGAGAATGGTAAGAATGGTGCTTCTAGGATTCAGCCAAACCAAAGCTTTAACTTTTACTTTTaGATCAGGCGGTTGGCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: FKCENGKNGASRIQPNQSFNFYF*IRRLAQ Trigger: TTGGGCCAACCGCCTGATCAAAAAGTAAAAGTTAAA...GCTTTGGTTTGGCTGAATCCTAGAAGCACCATTCTTACCATTCTCACATTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034048.13 ENSMUST00000164504.2 |
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| CDS-3UTR CAA 90 bp | TCATTCGCTGTGACGGTGTACAGACATTTACACACTAAGACTTTGGCATTTACGATCTACGGTCTAGATTaGCATCTAACACTGAAGATT | + |
|
Preference number: 5 (lower is better) Translates to: SFAVTVYRHLHTKTLAFTIYGLD*HLTLKI Trigger: AATCTTCAGTGTTAGATGCAAATCTAGACCGTAGAT...CGTAAATGCCAAAGTCTTAGTGTGTAAATGTCTGTACACCGTCACAGCGAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
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| CDS TCA 72 bp | CAGGCGGTTGGCCCAACTCAAGCGACTGGGCAGGGCTaGCATCTGGAGTTGACAAAGGAGTTATGTCTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: QAVGPTQATGQG*HLELTKELCLV Trigger: TACCAGACATAACTCCTTTGTCAACTCCAGATGTCAGCCCTGCCCAGTCGCTTGAGTTGGGCCAACCGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000145229.2 ENSMUST00000164504.2 |
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| CDS TCA 72 bp | CAACTCAAGCGACTGGGCAGGGCTGACATCTGGAGTTaGCAAAGGAGTTATGTCTGGTACATTGCCTTCGGA | + |
|
Preference number: 6 (lower is better) Translates to: QLKRLGRADIWS*QRSYVWYIAFG Trigger: TCCGAAGGCAATGTACCAGACATAACTCCTTTGTCAACTCCAGATGTCAGCCCTGCCCAGTCGCTTGAGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000145229.2 ENSMUST00000164504.2 |
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| CDS GCA 72 bp | TCCGATGGTAGTCCATCAGCTGTTCAGAGCGTTTCATaGCAACTGTTGGCTTCACAGCTTCAAGTCGTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SDGSPSAVQSVS*QLLASQLQVVS Trigger: TGAAACGACTTGAAGCTGTGAAGCCAACAGTTGGCATGAAACGCTCTGAACAGCTGATGGACTACCATCGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
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| CDS CAA 72 bp | AGTCCATCAGCTGTTCAGAGCGTTTCATGCCAACTGTaGGCTTCACAGCTTCAAGTCGTTTCAATAAAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SPSAVQSVSCQL*ASQLQVVSIKP Trigger: TGGCTTTATTGAAACGACTTGAAGCTGTGAAGCCAACAGTTGGCATGAAACGCTCTGAACAGCTGATGGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
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| CDS CAA 90 bp | TCCGATGGTAGTCCATCAGCTGTTCAGAGCGTTTCATGCCAACTGTaGGCTTCACAGCTTCAAGTCGTTTCAATAAAGCCATATTTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SDGSPSAVQSVSCQL*ASQLQVVSIKPYFL Trigger: GAGAAAATATGGCTTTATTGAAACGACTTGAAGCTGTGAAGCCAACAGTTGGCATGAAACGCTCTGAACAGCTGATGGACTACCATCGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
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| CDS GCA 72 bp | CATCTGGAGTTGACAAAGGAGTTATGTCTGGTACATTaGCTTCGGACTCATGATAGTCACCAGTCTTTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: HLELTKELCLVH*LRTHDSHQSFV Trigger: AACAAAAGACTGGTGACTATCATGAGTCCGAAGGCAATGTACCAGACATAACTCCTTTGTCAACTCCAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000145229.2 ENSMUST00000164504.2 |
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| CDS CAA 72 bp | ATCTACGGTCTAGATTTGCATCTAACACTGAAGATTTaGGAGCAAAACTCTGTCCATGCTTTTCTTTCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: IYGLDLHLTLKI*EQNSVHAFLSF Trigger: AAAGGAAAGAAAAGCATGGACAGAGTTTTGCTCCAAAATCTTCAGTGTTAGATGCAAATCTAGACCGTAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034048.13 ENSMUST00000110376.8 ENSMUST00000164504.2 |
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