Pregenerated sensors for CFAP20DC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021747Ensembl transcript IDs: ENSMUST00000102996.4
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CACGCACTCAGCTACAAAGAGAATGCAGATGTTCTTAACATTAAATGCTATTTATCTCTCCATTCCTTTTaGCTCCATGGGCCCCCATGC | + |
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Preference number: 2 (lower is better) Translates to: HALSYKENADVLNIKCYLSLHSF*LHGPPC Trigger: GCATGGGGGCCCATGGAGTCAAAAGGAATGGAGAGA...TAAATAGCATTTAATGTTAAGAACATCTGCATTCTCTTTGTAGCTGAGTGCGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| 3UTR CCA 72 bp | TTTACAAAGCCCTTCTCTCCATTCCTTTTGACTCCATaGGCCCCCATGCCCAACACCCAGTCACGGTGCCCA | + |
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Preference number: 3 (lower is better) Translates to: FTKPFSPFLLTP*APMPNTQSRCP Trigger: TGGGCACCGTGACTGGGTGTTGGGCATGGGGGCCCATGGAGTCAAAAGGAATGGAGAGAAGGGCTTTGTAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| 3UTR-3UTR CAA 90 bp | CACGCACTCAGCTACAAAGAGAATGCAGATGTTCTTAACATTAAATGCTATTTATTCTCTCCATTCCTTTaGACTCCATGGGCCCCCATG | + |
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Preference number: 3 (lower is better) Translates to: HALSYKENADVLNIKCYLFSPFL*TPWAPM Trigger: CATGGGGGCCCATGGAGTCAAAAGGAATGGAGAGAA...TAAATAGCATTTAATGTTAAGAACATCTGCATTCTCTTTGTAGCTGAGTGCGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR CCA 90 bp | CTCCATGGGCCCCCATGCCCAACACCCAGTCACGGTGCCCATTGTGGACTTCACTCCTTGGGAGCCCTCTaGGTTTCCTCTGCCTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: LHGPPCPTPSHGAHCGLHSLGAL*VSSAWS Trigger: TGACCAGGCAGAGGAAACCCAGAGGGCTCCCAAGGA...GTGAAGTCCACAATGGGCACCGTGACTGGGTGTTGGGCATGGGGGCCCATGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR GCA 90 bp | TCCATGGGCCCCCATGCCCAACACCCAGTCACGGTGCCCATTGTGGACTTCACGCTTCCTTTCTCTCCTTaGTGGTCAGCCAGCAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: SMGPHAQHPVTVPIVDFTLPFSP*WSASKA Trigger: GGCCTTGCTGGCTGACCAGCAAGGAGAGAAAGGAAG...CGTGAAGTCCACAATGGGCACCGTGACTGGGTGTTGGGCATGGGGGCCCATGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR TCA 90 bp | CCCTTCTCTCCATTCCTTTTGACTCCATGGGCCCCCATGCCCAACACCCAGTCATGTTCCACTGGCTGCTaGCTGGGAGGGACAATGGGT | + |
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Preference number: 4 (lower is better) Translates to: PFSPFLLTPWAPMPNTQSCSTGC*LGGTMG Trigger: ACCCATTGTCCCTCCCAGTCAGCAGCCAGTGGAACA...TGACTGGGTGTTGGGCATGGGGGCCCATGGAGTCAAAAGGAATGGAGAGAAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR CCA 90 bp | GCCCCCATGCCCAACACCCAGTCACGGTGCCCATTGTGGACTTCACGCTGCTGTGTTCACTGTCCTTGCTaGTTTCTAGCCACAGGTTCG | + |
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Preference number: 4 (lower is better) Translates to: APMPNTQSRCPLWTSRCCVHCPC*FLATGS Trigger: CGAACCTGTGGCTAGAAACCAGCAAGGACAGTGAAC...ACAGCAGCGTGAAGTCCACAATGGGCACCGTGACTGGGTGTTGGGCATGGGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR CCA 90 bp | GCCCCCATGCCCAACACCCAGTCACGGTGCCCATTGTGGACTTCACGCTGCTGTTGGGTTTCCTCTGCCTaGTCATGTTCACTGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: APMPNTQSRCPLWTSRCCWVSSA*SCSLSL Trigger: CAAGGACAGTGAACATGACCAGGCAGAGGAAACCCA...ACAGCAGCGTGAAGTCCACAATGGGCACCGTGACTGGGTGTTGGGCATGGGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR CCA 90 bp | GCCCCCATGCCCAACACCCAGTCACGGTGCCCATTGTGGACTTCACGCTGCTGTACTTGGGGTCTTCCTTaGTCACTTGGCTGTCGTCTT | + |
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Preference number: 4 (lower is better) Translates to: APMPNTQSRCPLWTSRCCTWGLP*SLGCRL Trigger: AAGACGACAGCCAAGTGACCAAGGAAGACCCCAAGT...ACAGCAGCGTGAAGTCCACAATGGGCACCGTGACTGGGTGTTGGGCATGGGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR CCA 90 bp | AACACCCAGTCACGGTGCCCATTGTGGACTTCACGCTGCTGTTACGATGAAGGACCACTGGCTGCTGACTaGGAGGGACAATGGGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: NTQSRCPLWTSRCCYDEGPLAAD*EGQWVG Trigger: GCCCACCCATTGTCCCTCCCAGTCAGCAGCCAGTGG...TCCTTCATCGTAACAGCAGCGTGAAGTCCACAATGGGCACCGTGACTGGGTGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR GCA 90 bp | CTCCATGGGCCCCCATGCCCAACACCCAGTCACGGTGCCCATTGTGGACTTCACCATGTTCACTGTCCTTaGTGGTTTCTAGCCACAGGT | + |
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Preference number: 4 (lower is better) Translates to: LHGPPCPTPSHGAHCGLHHVHCP*WFLATG Trigger: ACCTGTGGCTAGAAACCAGCAAGGACAGTGAACATG...GTGAAGTCCACAATGGGCACCGTGACTGGGTGTTGGGCATGGGGGCCCATGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR GCA 90 bp | CCCTTCTCTCCATTCCTTTTGACTCCATGGGCCCCCATGCCCAACACCCAGTCACTTCGCTGCTCTCACTaGCATAGAAGCCGCCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: PFSPFLLTPWAPMPNTQSLRCSH*HRSRLP Trigger: TGGAAGGCGGCTTCTATGGCAGTGAGAGCAGCGAAG...TGACTGGGTGTTGGGCATGGGGGCCCATGGAGTCAAAAGGAATGGAGAGAAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR TCA 90 bp | TCCATGGGCCCCCATGCCCAACACCCAGTCACGGTGCCCATTGTGGACTTCACGTGCATGAAGAGGTGTTaGAGACACTTCCTTATGGAC | + |
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Preference number: 4 (lower is better) Translates to: SMGPHAQHPVTVPIVDFTCMKRC*RHFLMD Trigger: GTCCATAAGGAAGTGTCTTCAACACCTCTTCATGCA...CGTGAAGTCCACAATGGGCACCGTGACTGGGTGTTGGGCATGGGGGCCCATGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR TCA 90 bp | AACACCCAGTCACGGTGCCCATTGTGGACTTCACGCTGCTGTTACGATGAAGGATTACAGTGGTCTACCTaGGACGCGCTCAGGCCATGG | + |
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Preference number: 4 (lower is better) Translates to: NTQSRCPLWTSRCCYDEGLQWST*DALRPW Trigger: CCATGGCCTGAGCGCGTCTCAGGTAGACCACTGTAA...TCCTTCATCGTAACAGCAGCGTGAAGTCCACAATGGGCACCGTGACTGGGTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR TCA 90 bp | TCCATGGGCCCCCATGCCCAACACCCAGTCACGGTGCCCATTGTGGACTTCACGGGTCAAAGTAGCAGTTaGGACATGGGTCATACAACA | + |
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Preference number: 4 (lower is better) Translates to: SMGPHAQHPVTVPIVDFTGQSSS*DMGHTT Trigger: TGTTGTATGACCCATGTCTCAACTGCTACTTTGACC...CGTGAAGTCCACAATGGGCACCGTGACTGGGTGTTGGGCATGGGGGCCCATGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR GCA 90 bp | AACACCCAGTCACGGTGCCCATTGTGGACTTCACGCTGCTGTTACGATGAAGGACTGTCCTGTCTCCGCTaGTGCTCTTTAGCCGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: NTQSRCPLWTSRCCYDEGLSCLR*CSLAGV Trigger: GACTCCGGCTAAAGAGCAGCAGCGGAGACAGGACAG...TCCTTCATCGTAACAGCAGCGTGAAGTCCACAATGGGCACCGTGACTGGGTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR CCA 90 bp | AACACCCAGTCACGGTGCCCATTGTGGACTTCACGCTGCTGTTACGATGAAGGACCTTTCTCTCCTTGCTaGTCAGCCAGCAAGGCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: NTQSRCPLWTSRCCYDEGPFSPC*SASKAD Trigger: GTCGGCCTTGCTGGCTGACCAGCAAGGAGAGAAAGG...TCCTTCATCGTAACAGCAGCGTGAAGTCCACAATGGGCACCGTGACTGGGTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR GCA 90 bp | CTCCATGGGCCCCCATGCCCAACACCCAGTCACGGTGCCCATTGTGGACTTCACGGTCAATGCACAAGTTaGACCAAATTTTACGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LHGPPCPTPSHGAHCGLHGQCTS*TKFYAG Trigger: TCCAGCGTAAAATTTGGTGCAACTTGTGCATTGACC...GTGAAGTCCACAATGGGCACCGTGACTGGGTGTTGGGCATGGGGGCCCATGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR CCA 90 bp | GCCCCCATGCCCAACACCCAGTCACGGTGCCCATTGTGGACTTCACGCTGCTGTCTGGATCATGAAGAGTaGGATTTTTGCATGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: APMPNTQSRCPLWTSRCCLDHEE*DFCMKR Trigger: CCTCTTCATGCAAAAATCCCACTCTTCATGATCCAG...ACAGCAGCGTGAAGTCCACAATGGGCACCGTGACTGGGTGTTGGGCATGGGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR CCA 90 bp | GCCCCCATGCCCAACACCCAGTCACGGTGCCCATTGTGGACTTCACGCTGCTGTTCTTCTGTAGGCTGCTaGCACAATTGGCTATTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: APMPNTQSRCPLWTSRCCSSVGC*HNWLFL Trigger: CAAAAATAGCCAATTGTGCCAGCAGCCTACAGAAGA...ACAGCAGCGTGAAGTCCACAATGGGCACCGTGACTGGGTGTTGGGCATGGGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR TCA 90 bp | TCCATGGGCCCCCATGCCCAACACCCAGTCACGGTGCCCATTGTGGACTTCACGGCTTTGATTTTAAAGTaGAGATCTTCCGCAGCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SMGPHAQHPVTVPIVDFTALILK*RSSAAY Trigger: GTAAGCTGCGGAAGATCTTCACTTTAAAATCAAAGC...CGTGAAGTCCACAATGGGCACCGTGACTGGGTGTTGGGCATGGGGGCCCATGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR CCA 90 bp | TCCATGGGCCCCCATGCCCAACACCCAGTCACGGTGCCCATTGTGGACTTCACGAAGTTGACAGCTTCGTaGAATAATATCTGTGGGTTC | + |
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Preference number: 4 (lower is better) Translates to: SMGPHAQHPVTVPIVDFTKLTAS*NNICGF Trigger: GAACCCACAGATATTATTCCACGAAGCTGTCAACTT...CGTGAAGTCCACAATGGGCACCGTGACTGGGTGTTGGGCATGGGGGCCCATGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR CCA 90 bp | AACACCCAGTCACGGTGCCCATTGTGGACTTCACGCTGCTGTTACGATGAAGGAGACTGGGAGGGACAATaGGTGGGCTCAACATGTTCA | + |
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Preference number: 4 (lower is better) Translates to: NTQSRCPLWTSRCCYDEGDWEGQ*VGSTCS Trigger: TGAACATGTTGAGCCCACCCATTGTCCCTCCCAGTC...TCCTTCATCGTAACAGCAGCGTGAAGTCCACAATGGGCACCGTGACTGGGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR GCA 90 bp | CCTCCACAACTTTCAAAGCCACGCACTCAGCTACAAAGAGAATGCAGATGTTCTGAGGAGCAACCACAGTaGGCCTCTGTCCTGTCTCCG | + |
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Preference number: 4 (lower is better) Translates to: PPQLSKPRTQLQRECRCSEEQPQ*ASVLSP Trigger: CGGAGACAGGACAGAGGCGCACTGTGGTTGCTCCTC...AGAACATCTGCATTCTCTTTGTAGCTGAGTGCGTGGCTTTGAAAGTTGTGGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR TCA 90 bp | AACACCCAGTCACGGTGCCCATTGTGGACTTCACGCTGCTGTTACGATGAAGGAATGTGGCACACATCTTaGCCTTTACTGTTCTGGACG | + |
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Preference number: 4 (lower is better) Translates to: NTQSRCPLWTSRCCYDEGMWHTS*PLLFWT Trigger: CGTCCAGAACAGTAAAGGTCAAGATGTGTGCCACAT...TCCTTCATCGTAACAGCAGCGTGAAGTCCACAATGGGCACCGTGACTGGGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR GCA 90 bp | TCCATGGGCCCCCATGCCCAACACCCAGTCACGGTGCCCATTGTGGACTTCACGAAAAATTTCAACAAATaGACCTCCCTGGTACTCATT | + |
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Preference number: 4 (lower is better) Translates to: SMGPHAQHPVTVPIVDFTKNFNK*TSLVLI Trigger: AATGAGTACCAGGGAGGTGCATTTGTTGAAATTTTT...CGTGAAGTCCACAATGGGCACCGTGACTGGGTGTTGGGCATGGGGGCCCATGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR GCA 90 bp | AACACCCAGTCACGGTGCCCATTGTGGACTTCACGCTGCTGTTACGATGAAGGAGGAGTCTTCTTCGGTTaGTACCCTTATCTGCTGATG | + |
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Preference number: 4 (lower is better) Translates to: NTQSRCPLWTSRCCYDEGGVFFG*YPYLLM Trigger: CATCAGCAGATAAGGGTAGCAACCGAAGAAGACTCC...TCCTTCATCGTAACAGCAGCGTGAAGTCCACAATGGGCACCGTGACTGGGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR CCA 90 bp | GCCCCCATGCCCAACACCCAGTCACGGTGCCCATTGTGGACTTCACGCTGCTGTGTTAGATGGAGAAGGTaGATTCATTTCTTTCTGATA | + |
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Preference number: 4 (lower is better) Translates to: APMPNTQSRCPLWTSRCCVRWRR*IHFFLI Trigger: TATCAGAAAGAAATGAATCCACCTTCTCCATCTAAC...ACAGCAGCGTGAAGTCCACAATGGGCACCGTGACTGGGTGTTGGGCATGGGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR CCA 90 bp | GTATTAATTCCTCCACAACTTTCAAAGCCACGCACTCAGCTACAAAGAGAATGCGGGGTTCTGGAGTGCTaGCTCTCACTGGCTCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: VLIPPQLSKPRTQLQRECGVLEC*LSLALS Trigger: GGACAGAGCCAGTGAGAGCCAGCACTCCAGAACCCC...GCATTCTCTTTGTAGCTGAGTGCGTGGCTTTGAAAGTTGTGGAGGAATTAATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR GCA 90 bp | AGCCACGCACTCAGCTACAAAGAGAATGCAGATGTTCTTAACATTAAATGCTATCCGGGGGTTCTGGAGTaGTGGCTCTCACTGGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: SHALSYKENADVLNIKCYPGVLE*WLSLAL Trigger: CAGAGCCAGTGAGAGCCAGCACTCCAGAACCCCCGG...ATAGCATTTAATGTTAAGAACATCTGCATTCTCTTTGTAGCTGAGTGCGTGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR CCA 90 bp | CCTCCACAACTTTCAAAGCCACGCACTCAGCTACAAAGAGAATGCAGATGTTCTCTCTGTCCTCAGCTGTaGGATACTGTTGAGGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: PPQLSKPRTQLQRECRCSLCPQL*DTVEGH Trigger: ATGGCCCTCAACAGTATCCCACAGCTGAGGACAGAG...AGAACATCTGCATTCTCTTTGTAGCTGAGTGCGTGGCTTTGAAAGTTGTGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR CCA 90 bp | AGCCACGCACTCAGCTACAAAGAGAATGCAGATGTTCTTAACATTAAATGCTATAGGAGCCGGGGGTTCTaGAGTGCTGGCTCTCACTGG | + |
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Preference number: 4 (lower is better) Translates to: SHALSYKENADVLNIKCYRSRGF*SAGSHW Trigger: CCAGTGAGAGCCAGCACTCCAGAACCCCCGGCTCCT...ATAGCATTTAATGTTAAGAACATCTGCATTCTCTTTGTAGCTGAGTGCGTGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR TCA 90 bp | AGCCTAAAATCTGGTGTCTGTATTAATTCCTCCACAACTTTCAAAGCCACGCACGCTACCCTTATCTGCTaGTGGCTCTTGAGGGGGATG | + |
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Preference number: 4 (lower is better) Translates to: SLKSGVCINSSTTFKATHATLIC*WLLRGM Trigger: CATCCCCCTCAAGAGCCATCAGCAGATAAGGGTAGC...GTGCGTGGCTTTGAAAGTTGTGGAGGAATTAATACAGACACCAGATTTTAGGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR GCA 90 bp | CCTCCACAACTTTCAAAGCCACGCACTCAGCTACAAAGAGAATGCAGATGTTCTTATATTCCTCTTCGCTaGTCTCACTGCCATAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: PPQLSKPRTQLQRECRCSYIPLR*SHCHRS Trigger: GCTTCTATGGCAGTGAGAGCAGCGAAGAGGAATATA...AGAACATCTGCATTCTCTTTGTAGCTGAGTGCGTGGCTTTGAAAGTTGTGGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR GCA 90 bp | CCTCCACAACTTTCAAAGCCACGCACTCAGCTACAAAGAGAATGCAGATGTTCTAAATCACAGACGGACTaGCCAAGATCTTCCATTTTG | + |
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Preference number: 4 (lower is better) Translates to: PPQLSKPRTQLQRECRCSKSQTD*PRSSIL Trigger: CAAAATGGAAGATCTTGGGCAGTCCGTCTGTGATTT...AGAACATCTGCATTCTCTTTGTAGCTGAGTGCGTGGCTTTGAAAGTTGTGGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR GCA 90 bp | AGCCACGCACTCAGCTACAAAGAGAATGCAGATGTTCTTAACATTAAATGCTATTTAGGTTATTCCGTCTaGCAGAGAGTGGAGGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: SHALSYKENADVLNIKCYLGYSV*QRVEGV Trigger: GACCCCCTCCACTCTCTGGCAGACGGAATAACCTAA...ATAGCATTTAATGTTAAGAACATCTGCATTCTCTTTGTAGCTGAGTGCGTGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR GCA 90 bp | AGCCTAAAATCTGGTGTCTGTATTAATTCCTCCACAACTTTCAAAGCCACGCACTTCTGTTGGTTTGGCTaGTGCCTTCCAGGACAAATA | + |
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Preference number: 4 (lower is better) Translates to: SLKSGVCINSSTTFKATHFCWFG*CLPGQI Trigger: TATTTGTCCTGGAAGGCAGCAGCCAAACCAACAGAA...GTGCGTGGCTTTGAAAGTTGTGGAGGAATTAATACAGACACCAGATTTTAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR TCA 90 bp | GTATTAATTCCTCCACAACTTTCAAAGCCACGCACTCAGCTACAAAGAGAATGCAGTGGGATTTTTGCATaGAGAGGTGTTGAAGACACT | + |
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Preference number: 4 (lower is better) Translates to: VLIPPQLSKPRTQLQRECSGIFA*RGVEDT Trigger: AGTGTCTTCAACACCTCTTCATGCAAAAATCCCACT...GCATTCTCTTTGTAGCTGAGTGCGTGGCTTTGAAAGTTGTGGAGGAATTAATAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR GCA 90 bp | CACGCACTCAGCTACAAAGAGAATGCAGATGTTCTTAACATTAAATGCTATTTATTGCACGCTCAGACTTaGAGAGGAGTCGAGAGACTG | + |
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Preference number: 4 (lower is better) Translates to: HALSYKENADVLNIKCYLLHAQT*RGVERL Trigger: CAGTCTCTCGACTCCTCTGCAAGTCTGAGCGTGCAA...TAAATAGCATTTAATGTTAAGAACATCTGCATTCTCTTTGTAGCTGAGTGCGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR CCA 90 bp | AGCCACGCACTCAGCTACAAAGAGAATGCAGATGTTCTTAACATTAAATGCTATGTAACTGGATTCTGTTaGTTTGGCTGCTGCCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: SHALSYKENADVLNIKCYVTGFC*FGCCLP Trigger: TGGAAGGCAGCAGCCAAACCAACAGAATCCAGTTAC...ATAGCATTTAATGTTAAGAACATCTGCATTCTCTTTGTAGCTGAGTGCGTGGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR GCA 90 bp | AGCCACGCACTCAGCTACAAAGAGAATGCAGATGTTCTTAACATTAAATGCTATTGTTGGTTTGGCTGCTaGCTTCCAGGACAAATACAA | + |
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Preference number: 4 (lower is better) Translates to: SHALSYKENADVLNIKCYCWFGC*LPGQIQ Trigger: TTGTATTTGTCCTGGAAGGCAGCAGCCAAACCAACA...ATAGCATTTAATGTTAAGAACATCTGCATTCTCTTTGTAGCTGAGTGCGTGGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR CCA 90 bp | CACGCACTCAGCTACAAAGAGAATGCAGATGTTCTTAACATTAAATGCTATTTAATTCGCTCATCTGGCTaGGCTGATAGTTTCTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: HALSYKENADVLNIKCYLIRSSG*ADSFSS Trigger: ACTGGAGAAACTATCAGCCCAGCCAGATGAGCGAAT...TAAATAGCATTTAATGTTAAGAACATCTGCATTCTCTTTGTAGCTGAGTGCGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR CCA 90 bp | GTATTAATTCCTCCACAACTTTCAAAGCCACGCACTCAGCTACAAAGAGAATGCGAAGACACTTCCTTATaGACTGTTGATAAATACAAC | + |
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Preference number: 4 (lower is better) Translates to: VLIPPQLSKPRTQLQRECEDTSL*TVDKYN Trigger: GTTGTATTTATCAACAGTCCATAAGGAAGTGTCTTC...GCATTCTCTTTGTAGCTGAGTGCGTGGCTTTGAAAGTTGTGGAGGAATTAATAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR CCA 90 bp | AGCCACGCACTCAGCTACAAAGAGAATGCAGATGTTCTTAACATTAAATGCTATCACCAAATTTTACGCTaGATCATGAAGAGTGGGATT | + |
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Preference number: 4 (lower is better) Translates to: SHALSYKENADVLNIKCYHQILR*IMKSGI Trigger: AATCCCACTCTTCATGATCCAGCGTAAAATTTGGTG...ATAGCATTTAATGTTAAGAACATCTGCATTCTCTTTGTAGCTGAGTGCGTGGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR GCA 90 bp | CACGCACTCAGCTACAAAGAGAATGCAGATGTTCTTAACATTAAATGCTATTTACAACGACTGGAAAACTaGTCCTTTGAATATCTCACT | + |
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Preference number: 4 (lower is better) Translates to: HALSYKENADVLNIKCYLQRLEN*SFEYLT Trigger: AGTGAGATATTCAAAGGAGCAGTTTTCCAGTCGTTG...TAAATAGCATTTAATGTTAAGAACATCTGCATTCTCTTTGTAGCTGAGTGCGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR CAA 90 bp | GCCCCCATGCCCAACACCCAGTCACGGTGCCCATTGTGGACTTCACGCTGCTGTCTGGATTCTGTTGGTTaGGCTGCTGCCTTCCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: APMPNTQSRCPLWTSRCCLDSVG*AAAFQD Trigger: GTCCTGGAAGGCAGCAGCCAAACCAACAGAATCCAG...ACAGCAGCGTGAAGTCCACAATGGGCACCGTGACTGGGTGTTGGGCATGGGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS TCA 90 bp | GTGTCATCACTGCTGGTACTGATGCTGACATTACAGTGGTCTACCTaGGACGCGCTCAGGCCATGGGGAGCCCCAGTGTCCTCCAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VSSLLVLMLTLQWST*DALRPWGAPVSSRS Trigger: AGACCTGGAGGACACTGGGGCTCCCCATGGCCTGAGCGCGTCTCAGGTAGACCACTGTAATGTCAGCATCAGTACCAGCAGTGATGACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS GCA 90 bp | TTCCCGAGGAGCAACCACAGTGCGCCTCTGTCCTGTCTCCGCTGCTaGTCTTTAGCCGGAGTCTTCTTCGGTTGCTACCCTTATCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FPRSNHSAPLSCLRC*SLAGVFFGCYPYLL Trigger: CAGCAGATAAGGGTAGCAACCGAAGAAGACTCCGGCTAAAGAGCAGCAGCGGAGACAGGACAGAGGCGCACTGTGGTTGCTCCTCGGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR CAA 90 bp | CTCCATGGGCCCCCATGCCCAACACCCAGTCACGGTGCCCATTGTGGACTTCACAAGGTAAAAATGTCCTaGGGAGCCCTCTGGGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LHGPPCPTPSHGAHCGLHKVKMS*GALWVS Trigger: GGAAACCCAGAGGGCTCCCAAGGACATTTTTACCTT...GTGAAGTCCACAATGGGCACCGTGACTGGGTGTTGGGCATGGGGGCCCATGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS TCA 90 bp | ACGCTCAGACTTGCAGAGGAGTCGAGAGACTGTTCCACTGGCTGCTaGCTGGGAGGGACAATGGGTGGGCTCAACATGTTCAGCCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: TLRLAEESRDCSTGC*LGGTMGGLNMFSQS Trigger: AGACTGGCTGAACATGTTGAGCCCACCCATTGTCCCTCCCAGTCAGCAGCCAGTGGAACAGTCTCTCGACTCCTCTGCAAGTCTGAGCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS GCA 90 bp | GTCTTCTTCCACACGTGGATCCTCTTCACCTTGCACGCTCAGACTTaGAGAGGAGTCGAGAGACTGTTCCACTGGCTGCTGACTGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VFFHTWILFTLHAQT*RGVERLFHWLLTGR Trigger: CCTCCCAGTCAGCAGCCAGTGGAACAGTCTCTCGACTCCTCTGCAAGTCTGAGCGTGCAAGGTGAAGAGGATCCACGTGTGGAAGAAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CCA 90 bp | GTCGAGAGACTGTTCCACTGGCTGCTGACTGGGAGGGACAATGGGTaGGCTCAACATGTTCAGCCAGTCTCGAGGGTTAGATGGAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: VERLFHWLLTGRDNG*AQHVQPVSRVRWRR Trigger: CCTTCTCCATCTAACCCTCGAGACTGGCTGAACATGTTGAGCCCACCCATTGTCCCTCCCAGTCAGCAGCCAGTGGAACAGTCTCTCGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CCA 90 bp | TCAGACTTGCAGAGGAGTCGAGAGACTGTTCCACTGGCTGCTGACTaGGAGGGACAATGGGTGGGCTCAACATGTTCAGCCAGTCTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: SDLQRSRETVPLAAD*EGQWVGSTCSASLE Trigger: CTCGAGACTGGCTGAACATGTTGAGCCCACCCATTGTCCCTCCCAGTCAGCAGCCAGTGGAACAGTCTCTCGACTCCTCTGCAAGTCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CCA 90 bp | ACCTTGCACGCTCAGACTTGCAGAGGAGTCGAGAGACTGTTCCACTaGCTGCTGACTGGGAGGGACAATGGGTGGGCTCAACATGTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: TLHAQTCRGVERLFH*LLTGRDNGWAQHVQ Trigger: CTGAACATGTTGAGCCCACCCATTGTCCCTCCCAGTCAGCAGCCAGTGGAACAGTCTCTCGACTCCTCTGCAAGTCTGAGCGTGCAAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR CAA 90 bp | CTCCATGGGCCCCCATGCCCAACACCCAGTCACGGTGCCCATTGTGGACTTCACGATGTGGCACACATCTaGACCTTTACTGTTCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LHGPPCPTPSHGAHCGLHDVAHI*TFTVLD Trigger: GTCCAGAACAGTAAAGGTCAAGATGTGTGCCACATC...GTGAAGTCCACAATGGGCACCGTGACTGGGTGTTGGGCATGGGGGCCCATGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS GCA 90 bp | GAATGGACCTTACTGTCTCAGTGGACTGCCTTAGGTTATTCCGTCTaGCAGAGAGTGGAGGGGGTCCAAGAACCCTGGATCCGAAGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: EWTLLSQWTALGYSV*QRVEGVQEPWIRRR Trigger: TCGCCTTCGGATCCAGGGTTCTTGGACCCCCTCCACTCTCTGGCAGACGGAATAACCTAAGGCAGTCCACTGAGACAGTAAGGTCCATTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS GCA 90 bp | CTGTCCTGTCTCCGCTGCTGCTCTTTAGCCGGAGTCTTCTTCGGTTaGTACCCTTATCTGCTGATGGCTCTTGAGGGGGATGTGGATACG | + |
|
Preference number: 5 (lower is better) Translates to: LSCLRCCSLAGVFFG*YPYLLMALEGDVDT Trigger: CGTATCCACATCCCCCTCAAGAGCCATCAGCAGATAAGGGTAGCAACCGAAGAAGACTCCGGCTAAAGAGCAGCAGCGGAGACAGGACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS GCA 90 bp | TGGGAGCCCTCTGGGTTTCCTCTGCCTGGTCATGTTCACTGTCCTTaGTGGTTTCTAGCCACAGGTTCGAGGCAGTGTGGGAGTCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: WEPSGFPLPGHVHCP*WFLATGSRQCGSLH Trigger: ATGAAGACTCCCACACTGCCTCGAACCTGTGGCTAGAAACCAGCAAGGACAGTGAACATGACCAGGCAGAGGAAACCCAGAGGGCTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CCA 90 bp | GGTGTGGTCTGCTTCAAAGGGCGAGCACTTCCTTTCTCTCCTTGCTaGTCAGCCAGCAAGGCCGACACTTCCGTACTGTTAACACTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GVVCFKGRALPFSPC*SASKADTSVLLTLL Trigger: GAGGAGTGTTAACAGTACGGAAGTGTCGGCCTTGCTGGCTGACCAGCAAGGAGAGAAAGGAAGTGCTCGCCCTTTGAAGCAGACCACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CCA 90 bp | CGGGGGTTCTGGAGTGCTGGCTCTCACTGGCTCTGTCCTCAGCTGTaGGATACTGTTGAGGGCCATGACAACATCTTCTTCACTCCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: RGFWSAGSHWLCPQL*DTVEGHDNIFFTPV Trigger: AACAGGAGTGAAGAAGATGTTGTCATGGCCCTCAACAGTATCCCACAGCTGAGGACAGAGCCAGTGAGAGCCAGCACTCCAGAACCCCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CCA 90 bp | CTCAGGAAATATCCACTCATCTGGTTGTTCAGGAGCCGGGGGTTCTaGAGTGCTGGCTCTCACTGGCTCTGTCCTCAGCTGTGGGATACT | + |
|
Preference number: 5 (lower is better) Translates to: LRKYPLIWLFRSRGF*SAGSHWLCPQLWDT Trigger: AGTATCCCACAGCTGAGGACAGAGCCAGTGAGAGCCAGCACTCCAGAACCCCCGGCTCCTGAACAACCAGATGAGTGGATATTTCCTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR CAA 90 bp | CTCCATGGGCCCCCATGCCCAACACCCAGTCACGGTGCCCATTGTGGACTTCACCCAAGATCTTCCATTTaGCTCCAGGATTTTTCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LHGPPCPTPSHGAHCGLHPRSSI*LQDFSP Trigger: AGGGGAAAAATCCTGGAGCAAAATGGAAGATCTTGG...GTGAAGTCCACAATGGGCACCGTGACTGGGTGTTGGGCATGGGGGCCCATGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR CAA 90 bp | CCCTTCTCTCCATTCCTTTTGACTCCATGGGCCCCCATGCCCAACACCCAGTCATGGATCCTCTTCACCTaGCACGCTCAGACTTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PFSPFLLTPWAPMPNTQSWILFT*HAQTCR Trigger: TCTGCAAGTCTGAGCGTGCAAGGTGAAGAGGATCCA...TGACTGGGTGTTGGGCATGGGGGCCCATGGAGTCAAAAGGAATGGAGAGAAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CCA 90 bp | GAGCCCTCTGGGTTTCCTCTGCCTGGTCATGTTCACTGTCCTTGCTaGTTTCTAGCCACAGGTTCGAGGCAGTGTGGGAGTCTTCATCTA | + |
|
Preference number: 5 (lower is better) Translates to: EPSGFPLPGHVHCPC*FLATGSRQCGSLHL Trigger: TAGATGAAGACTCCCACACTGCCTCGAACCTGTGGCTAGAAACCAGCAAGGACAGTGAACATGACCAGGCAGAGGAAACCCAGAGGGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR CAA 90 bp | GCCCCCATGCCCAACACCCAGTCACGGTGCCCATTGTGGACTTCACGCTGCTGTTTGCATGAAGAGGTGTaGAAGACACTTCCTTATGGA | + |
|
Preference number: 5 (lower is better) Translates to: APMPNTQSRCPLWTSRCCLHEEV*KTLPYG Trigger: TCCATAAGGAAGTGTCTTCAACACCTCTTCATGCAA...ACAGCAGCGTGAAGTCCACAATGGGCACCGTGACTGGGTGTTGGGCATGGGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS GCA 90 bp | ACAACATCTTCTTCACTCCTGTTATTTCCCGAGGAGCAACCACAGTaGGCCTCTGTCCTGTCTCCGCTGCTGCTCTTTAGCCGGAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: TTSSSLLLFPEEQPQ*ASVLSPLLLFSRSL Trigger: AAGACTCCGGCTAAAGAGCAGCAGCGGAGACAGGACAGAGGCGCACTGTGGTTGCTCCTCGGGAAATAACAGGAGTGAAGAAGATGTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CCA 90 bp | TGGGTCATACAACAGAGTCAGCACTTCCTCGTCTTCTTCCACACGTaGATCCTCTTCACCTTGCACGCTCAGACTTGCAGAGGAGTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: WVIQQSQHFLVFFHT*ILFTLHAQTCRGVE Trigger: CTCGACTCCTCTGCAAGTCTGAGCGTGCAAGGTGAAGAGGATCCACGTGTGGAAGAAGACGAGGAAGTGCTGACTCTGTTGTATGACCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR CAA 90 bp | GCCCCCATGCCCAACACCCAGTCACGGTGCCCATTGTGGACTTCACGCTGCTGTAACATCTGTTGCAAGTaGACAGCTTCGTGGAATAAT | + |
|
Preference number: 5 (lower is better) Translates to: APMPNTQSRCPLWTSRCCNICCK*TASWNN Trigger: ATTATTCCACGAAGCTGTCAACTTGCAACAGATGTT...ACAGCAGCGTGAAGTCCACAATGGGCACCGTGACTGGGTGTTGGGCATGGGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CCA 90 bp | TTAGGTTATTCCGTCTGCCAGAGAGTGGAGGGGGTCCAAGAACCCTaGATCCGAAGGCGATGTGGCACACATCTTGACCTTTACTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LGYSVCQRVEGVQEP*IRRRCGTHLDLYCS Trigger: AGAACAGTAAAGGTCAAGATGTGTGCCACATCGCCTTCGGATCCAGGGTTCTTGGACCCCCTCCACTCTCTGGCAGACGGAATAACCTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CCA 90 bp | TGGGCTCAACATGTTCAGCCAGTCTCGAGGGTTAGATGGAGAAGGTaGATTCATTTCTTTCTGATAGTGACGGCCCTGGTTCACAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: WAQHVQPVSRVRWRR*IHFFLIVTALVHRG Trigger: CCCCCTGTGAACCAGGGCCGTCACTATCAGAAAGAAATGAATCCACCTTCTCCATCTAACCCTCGAGACTGGCTGAACATGTTGAGCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS GCA 90 bp | TCATCTGGCTGGGCTGATAGTTTCTCCAGTTATATTCCTCTTCGCTaGTCTCACTGCCATAGAAGCCGCCTTCCAACTTGGGGTCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SSGWADSFSSYIPLR*SHCHRSRLPTWGLP Trigger: AGGAAGACCCCAAGTTGGAAGGCGGCTTCTATGGCAGTGAGAGCAGCGAAGAGGAATATAACTGGAGAAACTATCAGCCCAGCCAGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CCA 90 bp | GGCACAATTGGCTATTTTTGTACCGAATGGACCTTACTGTCTCAGTaGACTGCCTTAGGTTATTCCGTCTGCCAGAGAGTGGAGGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GTIGYFCTEWTLLSQ*TALGYSVCQRVEGV Trigger: GACCCCCTCCACTCTCTGGCAGACGGAATAACCTAAGGCAGTCCACTGAGACAGTAAGGTCCATTCGGTACAAAAATAGCCAATTGTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CCA 90 bp | GAAAAGGTAAAAATGTCCTTGGGAGCCCTCTGGGTTTCCTCTGCCTaGTCATGTTCACTGTCCTTGCTGGTTTCTAGCCACAGGTTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: EKVKMSLGALWVSSA*SCSLSLLVSSHRFE Trigger: CTCGAACCTGTGGCTAGAAACCAGCAAGGACAGTGAACATGACCAGGCAGAGGAAACCCAGAGGGCTCCCAAGGACATTTTTACCTTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CCA 90 bp | GACAATGGGTGGGCTCAACATGTTCAGCCAGTCTCGAGGGTTAGATaGAGAAGGTGGATTCATTTCTTTCTGATAGTGACGGCCCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: DNGWAQHVQPVSRVR*RRWIHFFLIVTALV Trigger: AACCAGGGCCGTCACTATCAGAAAGAAATGAATCCACCTTCTCCATCTAACCCTCGAGACTGGCTGAACATGTTGAGCCCACCCATTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS GCA 90 bp | AATTGGCTATTTTTGTACCGAATGGACCTTACTGTCTCAGTGGACTaGCTTAGGTTATTCCGTCTGCCAGAGAGTGGAGGGGGTCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: NWLFLYRMDLTVSVD*LRLFRLPESGGGPR Trigger: TCTTGGACCCCCTCCACTCTCTGGCAGACGGAATAACCTAAGGCAGTCCACTGAGACAGTAAGGTCCATTCGGTACAAAAATAGCCAATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CCA 90 bp | TTCCGCAGCTTACAGTTAGCAGAGACGATGATTCCATCCAACGACTaGAAAACTGCTCCTTTGAATATCTCACTGGTGAAGGCGACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FRSLQLAETMIPSND*KTAPLNISLVKATR Trigger: CCTGGTCGCCTTCACCAGTGAGATATTCAAAGGAGCAGTTTTCCAGTCGTTGGATGGAATCATCGTCTCTGCTAACTGTAAGCTGCGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CCA 90 bp | CTCGTAGTATTTGCCAGTCTGAGGGTCAAAGTAGCAGTTGAGACATaGGTCATACAACAGAGTCAGCACTTCCTCGTCTTCTTCCACACG | + |
|
Preference number: 5 (lower is better) Translates to: LVVFASLRVKVAVET*VIQQSQHFLVFFHT Trigger: CGTGTGGAAGAAGACGAGGAAGTGCTGACTCTGTTGTATGACCCATGTCTCAACTGCTACTTTGACCCTCAGACTGGCAAATACTACGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CCA 90 bp | GATCTTGGTCTAGATGAAAAGGTAAAAATGTCCTTGGGAGCCCTCTaGGTTTCCTCTGCCTGGTCATGTTCACTGTCCTTGCTGGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: DLGLDEKVKMSLGAL*VSSAWSCSLSLLVS Trigger: AGAAACCAGCAAGGACAGTGAACATGACCAGGCAGAGGAAACCCAGAGGGCTCCCAAGGACATTTTTACCTTTTCATCTAGACCAAGATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS TCA 90 bp | AGACCAACTCGTAGTATTTGCCAGTCTGAGGGTCAAAGTAGCAGTTaGGACATGGGTCATACAACAGAGTCAGCACTTCCTCGTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RPTRSICQSEGQSSS*DMGHTTESALPRLL Trigger: AAGAAGACGAGGAAGTGCTGACTCTGTTGTATGACCCATGTCTCAACTGCTACTTTGACCCTCAGACTGGCAAATACTACGAGTTGGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS GCA 90 bp | CTTACAGTTAGCAGAGACGATGATTCCATCCAACGACTGGAAAACTaGTCCTTTGAATATCTCACTGGTGAAGGCGACCAGGTCAATGCA | + |
|
Preference number: 5 (lower is better) Translates to: LTVSRDDDSIQRLEN*SFEYLTGEGDQVNA Trigger: TGCATTGACCTGGTCGCCTTCACCAGTGAGATATTCAAAGGAGCAGTTTTCCAGTCGTTGGATGGAATCATCGTCTCTGCTAACTGTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS TCA 90 bp | CGACCAGGTCAATGCACAAGTTGCACCAAATTTTACGCTGGATCATaGAGAGTGGGATTTTTGCATGAAGAGGTGTTGAAGACACTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RPGQCTSCTKFYAGS*RVGFLHEEVLKTLP Trigger: AGGAAGTGTCTTCAACACCTCTTCATGCAAAAATCCCACTCTTCATGATCCAGCGTAAAATTTGGTGCAACTTGTGCATTGACCTGGTCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CCA 90 bp | AACCTCTGGATCAGTCCAAGGATTTGCTTATTCTCCTTCGGTAACTaGATTCTGTTGGTTTGGCTGCTGCCTTCCAGGACAAATACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: NLWISPRICLFSFGN*ILLVWLLPSRTNTK Trigger: TTTTGTATTTGTCCTGGAAGGCAGCAGCCAAACCAACAGAATCCAGTTACCGAAGGAGAATAAGCAAATCCTTGGACTGATCCAGAGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR CAA 90 bp | AGCCACGCACTCAGCTACAAAGAGAATGCAGATGTTCTTAACATTAAATGCTATGGTAACTGGATTCTGTaGGTTTGGCTGCTGCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SHALSYKENADVLNIKCYGNWIL*VWLLPS Trigger: GGAAGGCAGCAGCCAAACCAACAGAATCCAGTTACC...ATAGCATTTAATGTTAAGAACATCTGCATTCTCTTTGTAGCTGAGTGCGTGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS TCA 90 bp | GCTCCGCTGCTGATGAACTGCTCTGATTCTGCTGATCTTAGAGGATaGCCTCCAAATTTAATTTCAGTTTGGCGGAGTTTTGTCATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: APLLMNCSDSADLRG*PPNLISVWRSFVMF Trigger: AAACATGACAAAACTCCGCCAAACTGAAATTAAATTTGGAGGTCATCCTCTAAGATCAGCAGAATCAGAGCAGTTCATCAGCAGCGGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR CAA 90 bp | CACGCACTCAGCTACAAAGAGAATGCAGATGTTCTTAACATTAAATGCTATTTAACTTCCTTTCTCTCCTaGCTGGTCAGCCAGCAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: HALSYKENADVLNIKCYLTSFLS*LVSQQG Trigger: GCCTTGCTGGCTGACCAGCAAGGAGAGAAAGGAAGT...TAAATAGCATTTAATGTTAAGAACATCTGCATTCTCTTTGTAGCTGAGTGCGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR CAA 90 bp | AGCCACGCACTCAGCTACAAAGAGAATGCAGATGTTCTTAACATTAAATGCTATCACTTGGCTGTCGTCTaGTGTGTCCAGAGTAAATGG | + |
|
Preference number: 5 (lower is better) Translates to: SHALSYKENADVLNIKCYHLAVV*CVQSKW Trigger: CCATTTACTCTGGACACACAAGACGACAGCCAAGTG...ATAGCATTTAATGTTAAGAACATCTGCATTCTCTTTGTAGCTGAGTGCGTGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CCA 90 bp | CAGCTGTGTAACATGAGGAACATCTGTTGCAAGTTGACAGCTTCGTaGAATAATATCTGTGGGTTCATCATCTTTATCAGCTGTCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QLCNMRNICCKLTAS*NNICGFIIFISCLL Trigger: CAAGAGACAGCTGATAAAGATGATGAACCCACAGATATTATTCCACGAAGCTGTCAACTTGCAACAGATGTTCCTCATGTTACACAGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR CAA 90 bp | AGCCACGCACTCAGCTACAAAGAGAATGCAGATGTTCTTAACATTAAATGCTATCATGAGGAACATCTGTaGCAAGTTGACAGCTTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: SHALSYKENADVLNIKCYHEEHL*QVDSFV Trigger: CACGAAGCTGTCAACTTGCAACAGATGTTCCTCATG...ATAGCATTTAATGTTAAGAACATCTGCATTCTCTTTGTAGCTGAGTGCGTGGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR CAA 90 bp | CACGCACTCAGCTACAAAGAGAATGCAGATGTTCTTAACATTAAATGCTATTTATACGGAATAGGTAGCTaGGCAGGAAGAGGTGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: HALSYKENADVLNIKCYLYGIGS*AGRGVV Trigger: GACCACACCTCTTCCTGCCAAGCTACCTATTCCGTA...TAAATAGCATTTAATGTTAAGAACATCTGCATTCTCTTTGTAGCTGAGTGCGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CCA 90 bp | CCAAGGATTTGCTTATTCTCCTTCGGTAACTGGATTCTGTTGGTTTaGCTGCTGCCTTCCAGGACAAATACAAAACTTTTAACTTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: PRICLFSFGNWILLV*LLPSRTNTKLLTSL Trigger: TAAAGAAGTTAAAAGTTTTGTATTTGTCCTGGAAGGCAGCAGCCAAACCAACAGAATCCAGTTACCGAAGGAGAATAAGCAAATCCTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR CAA 90 bp | CACGCACTCAGCTACAAAGAGAATGCAGATGTTCTTAACATTAAATGCTATTTACAGTTTGGCGGAGTTTaGTCATGTTTAGCAGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: HALSYKENADVLNIKCYLQFGGV*SCLAAV Trigger: CACAGCTGCTAAACATGACAAAACTCCGCCAAACTG...TAAATAGCATTTAATGTTAAGAACATCTGCATTCTCTTTGTAGCTGAGTGCGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
||
| CDS TCA 90 bp | TTGCACCAAATTTTACGCTGGATCATGAAGAGTGGGATTTTTGCATaGAGAGGTGTTGAAGACACTTCCTTATGGACTGTTGATAAATAC | + |
|
Preference number: 5 (lower is better) Translates to: LHQILRWIMKSGIFA*RGVEDTSLWTVDKY Trigger: GTATTTATCAACAGTCCATAAGGAAGTGTCTTCAACACCTCTTCATGCAAAAATCCCACTCTTCATGATCCAGCGTAAAATTTGGTGCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR CAA 90 bp | AGCCACGCACTCAGCTACAAAGAGAATGCAGATGTTCTTAACATTAAATGCTATCACAATTGGCTATTTTaGTACCGAATGGACCTTACT | + |
|
Preference number: 5 (lower is better) Translates to: SHALSYKENADVLNIKCYHNWLF*YRMDLT Trigger: AGTAAGGTCCATTCGGTACAAAAATAGCCAATTGTG...ATAGCATTTAATGTTAAGAACATCTGCATTCTCTTTGTAGCTGAGTGCGTGGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS-3UTR CAA 90 bp | CACGCACTCAGCTACAAAGAGAATGCAGATGTTCTTAACATTAAATGCTATTTAAGGCTGCTGGCACAATaGGCTATTTTTGTACCGAAT | + |
|
Preference number: 5 (lower is better) Translates to: HALSYKENADVLNIKCYLRLLAQ*AIFVPN Trigger: ATTCGGTACAAAAATAGCCAATTGTGCCAGCAGCCT...TAAATAGCATTTAATGTTAAGAACATCTGCATTCTCTTTGTAGCTGAGTGCGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS GCA 72 bp | CCATGGGGAGCCCCAGTGTCCTCCAGGTCTTCATTCTaGTGCCGCCGGAGGCTCGCCAGCATCTGCAGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: PWGAPVSSRSSF*CRRRLASICSS Trigger: TGAGCTGCAGATGCTGGCGAGCCTCCGGCGGCAGCAGAATGAAGACCTGGAGGACACTGGGGCTCCCCATGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS TCA 72 bp | CTGCTGGTACTGATGCTGACATTACAGTGGTCTACCTaGGACGCGCTCAGGCCATGGGGAGCCCCAGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LLVLMLTLQWST*DALRPWGAPVS Trigger: GGACACTGGGGCTCCCCATGGCCTGAGCGCGTCTCAGGTAGACCACTGTAATGTCAGCATCAGTACCAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS GCA 72 bp | AGGAGCAACCACAGTGCGCCTCTGTCCTGTCTCCGCTaGTGCTCTTTAGCCGGAGTCTTCTTCGGTTGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: RSNHSAPLSCLR*CSLAGVFFGCY Trigger: GTAGCAACCGAAGAAGACTCCGGCTAAAGAGCAGCAGCGGAGACAGGACAGAGGCGCACTGTGGTTGCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CCA 72 bp | TCCGTCTGCCAGAGAGTGGAGGGGGTCCAAGAACCCTaGATCCGAAGGCGATGTGGCACACATCTTGACCTT | + |
|
Preference number: 6 (lower is better) Translates to: SVCQRVEGVQEP*IRRRCGTHLDL Trigger: AAGGTCAAGATGTGTGCCACATCGCCTTCGGATCCAGGGTTCTTGGACCCCCTCCACTCTCTGGCAGACGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CCA 72 bp | TATCCACTCATCTGGTTGTTCAGGAGCCGGGGGTTCTaGAGTGCTGGCTCTCACTGGCTCTGTCCTCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: YPLIWLFRSRGF*SAGSHWLCPQL Trigger: CAGCTGAGGACAGAGCCAGTGAGAGCCAGCACTCCAGAACCCCCGGCTCCTGAACAACCAGATGAGTGGATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CCA 72 bp | CAGAGGAGTCGAGAGACTGTTCCACTGGCTGCTGACTaGGAGGGACAATGGGTGGGCTCAACATGTTCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: QRSRETVPLAAD*EGQWVGSTCSA Trigger: GGCTGAACATGTTGAGCCCACCCATTGTCCCTCCCAGTCAGCAGCCAGTGGAACAGTCTCTCGACTCCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CAA 90 bp | CGTCTTCTTCCACACGTGGATCCTCTTCACCTTGCACGCTCAGACTaGCAGAGGAGTCGAGAGACTGTTCCACTGGCTGCTGACTGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RLLPHVDPLHLARSD*QRSRETVPLAADWE Trigger: CTCCCAGTCAGCAGCCAGTGGAACAGTCTCTCGACTCCTCTGCAAGTCTGAGCGTGCAAGGTGAAGAGGATCCACGTGTGGAAGAAGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS TCA 72 bp | AGAACCCTGGATCCGAAGGCGATGTGGCACACATCTTaGCCTTTACTGTTCTGGACGCTGCCTGCTCCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RTLDPKAMWHTS*PLLFWTLPAPL Trigger: CAGCGGAGCAGGCAGCGTCCAGAACAGTAAAGGTCAAGATGTGTGCCACATCGCCTTCGGATCCAGGGTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS GCA 72 bp | GTCTGCTTCAAAGGGCGAGCACTTCCTTTCTCTCCTTaGTGGTCAGCCAGCAAGGCCGACACTTCCGTACTG | + |
|
Preference number: 6 (lower is better) Translates to: VCFKGRALPFSP*WSASKADTSVL Trigger: CAGTACGGAAGTGTCGGCCTTGCTGGCTGACCAGCAAGGAGAGAAAGGAAGTGCTCGCCCTTTGAAGCAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS GCA 72 bp | CACACGTGGATCCTCTTCACCTTGCACGCTCAGACTTaGAGAGGAGTCGAGAGACTGTTCCACTGGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: HTWILFTLHAQT*RGVERLFHWLL Trigger: CAGCAGCCAGTGGAACAGTCTCTCGACTCCTCTGCAAGTCTGAGCGTGCAAGGTGAAGAGGATCCACGTGTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CAA 72 bp | CCACACGTGGATCCTCTTCACCTTGCACGCTCAGACTaGCAGAGGAGTCGAGAGACTGTTCCACTGGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: PHVDPLHLARSD*QRSRETVPLAA Trigger: AGCAGCCAGTGGAACAGTCTCTCGACTCCTCTGCAAGTCTGAGCGTGCAAGGTGAAGAGGATCCACGTGTGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS GCA 72 bp | CTCCGCTGCTGCTCTTTAGCCGGAGTCTTCTTCGGTTaGTACCCTTATCTGCTGATGGCTCTTGAGGGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: LRCCSLAGVFFG*YPYLLMALEGD Trigger: ATCCCCCTCAAGAGCCATCAGCAGATAAGGGTAGCAACCGAAGAAGACTCCGGCTAAAGAGCAGCAGCGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS GCA 72 bp | TCTTCACTCCTGTTATTTCCCGAGGAGCAACCACAGTaGGCCTCTGTCCTGTCTCCGCTGCTGCTCTTTAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSLLLFPEEQPQ*ASVLSPLLLFS Trigger: GCTAAAGAGCAGCAGCGGAGACAGGACAGAGGCGCACTGTGGTTGCTCCTCGGGAAATAACAGGAGTGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS GCA 72 bp | TCTGGGTTTCCTCTGCCTGGTCATGTTCACTGTCCTTaGTGGTTTCTAGCCACAGGTTCGAGGCAGTGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SGFPLPGHVHCP*WFLATGSRQCG Trigger: CCCACACTGCCTCGAACCTGTGGCTAGAAACCAGCAAGGACAGTGAACATGACCAGGCAGAGGAAACCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CCA 72 bp | GGGTTTCCTCTGCCTGGTCATGTTCACTGTCCTTGCTaGTTTCTAGCCACAGGTTCGAGGCAGTGTGGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: GFPLPGHVHCPC*FLATGSRQCGS Trigger: ACTCCCACACTGCCTCGAACCTGTGGCTAGAAACCAGCAAGGACAGTGAACATGACCAGGCAGAGGAAACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CAA 90 bp | AGTCAGCACTTCCTCGTCTTCTTCCACACGTGGATCCTCTTCACCTaGCACGCTCAGACTTGCAGAGGAGTCGAGAGACTGTTCCACTGG | + |
|
Preference number: 6 (lower is better) Translates to: SQHFLVFFHTWILFT*HAQTCRGVERLFHW Trigger: CCAGTGGAACAGTCTCTCGACTCCTCTGCAAGTCTGAGCGTGCAAGGTGAAGAGGATCCACGTGTGGAAGAAGACGAGGAAGTGCTGACT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS GCA 72 bp | TTACTGTCTCAGTGGACTGCCTTAGGTTATTCCGTCTaGCAGAGAGTGGAGGGGGTCCAAGAACCCTGGATC | + |
|
Preference number: 6 (lower is better) Translates to: LLSQWTALGYSV*QRVEGVQEPWI Trigger: GATCCAGGGTTCTTGGACCCCCTCCACTCTCTGGCAGACGGAATAACCTAAGGCAGTCCACTGAGACAGTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS GCA 72 bp | TCCTCGTCTTCTTCCACACGTGGATCCTCTTCACCTTaGACGCTCAGACTTGCAGAGGAGTCGAGAGACTGT | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSTRGSSSP*TLRLAEESRDC Trigger: ACAGTCTCTCGACTCCTCTGCAAGTCTGAGCGTGCAAGGTGAAGAGGATCCACGTGTGGAAGAAGACGAGGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CCA 72 bp | AAGCCGCCTTCCAACTTGGGGTCTTCCTTGGTCACTTaGCTGTCGTCTTGTGTGTCCAGAGTAAATGGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: KPPSNLGSSLVT*LSSCVSRVNGH Trigger: GTGCCCATTTACTCTGGACACACAAGACGACAGCCAAGTGACCAAGGAAGACCCCAAGTTGGAAGGCGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CAA 72 bp | GAAGCCGCCTTCCAACTTGGGGTCTTCCTTGGTCACTaGGCTGTCGTCTTGTGTGTCCAGAGTAAATGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: EAAFQLGVFLGH*AVVLCVQSKWA Trigger: TGCCCATTTACTCTGGACACACAAGACGACAGCCAAGTGACCAAGGAAGACCCCAAGTTGGAAGGCGGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CAA 90 bp | GGAGTGCTGGCTCTCACTGGCTCTGTCCTCAGCTGTGGGATACTGTaGAGGGCCATGACAACATCTTCTTCACTCCTGTTATTTCCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: GVLALTGSVLSCGIL*RAMTTSSSLLLFPE Trigger: CTCGGGAAATAACAGGAGTGAAGAAGATGTTGTCATGGCCCTCAACAGTATCCCACAGCTGAGGACAGAGCCAGTGAGAGCCAGCACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CCA 72 bp | CAACAGAGTCAGCACTTCCTCGTCTTCTTCCACACGTaGATCCTCTTCACCTTGCACGCTCAGACTTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: QQSQHFLVFFHT*ILFTLHAQTCR Trigger: TCTGCAAGTCTGAGCGTGCAAGGTGAAGAGGATCCACGTGTGGAAGAAGACGAGGAAGTGCTGACTCTGTTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CAA 72 bp | GCTCTCACTGGCTCTGTCCTCAGCTGTGGGATACTGTaGAGGGCCATGACAACATCTTCTTCACTCCTGTTA | + |
|
Preference number: 6 (lower is better) Translates to: ALTGSVLSCGIL*RAMTTSSSLLL Trigger: TAACAGGAGTGAAGAAGATGTTGTCATGGCCCTCAACAGTATCCCACAGCTGAGGACAGAGCCAGTGAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS GCA 72 bp | TTTTTGTACCGAATGGACCTTACTGTCTCAGTGGACTaGCTTAGGTTATTCCGTCTGCCAGAGAGTGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: FLYRMDLTVSVD*LRLFRLPESGG Trigger: CCCTCCACTCTCTGGCAGACGGAATAACCTAAGGCAGTCCACTGAGACAGTAAGGTCCATTCGGTACAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS GCA 72 bp | AGTTTCTCCAGTTATATTCCTCTTCGCTGCTCTCACTaGCATAGAAGCCGCCTTCCAACTTGGGGTCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SFSSYIPLRCSH*HRSRLPTWGLP Trigger: AGGAAGACCCCAAGTTGGAAGGCGGCTTCTATGGCAGTGAGAGCAGCGAAGAGGAATATAACTGGAGAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS GCA 72 bp | TGGGCTGATAGTTTCTCCAGTTATATTCCTCTTCGCTaGTCTCACTGCCATAGAAGCCGCCTTCCAACTTGG | + |
|
Preference number: 6 (lower is better) Translates to: WADSFSSYIPLR*SHCHRSRLPTW Trigger: CCAAGTTGGAAGGCGGCTTCTATGGCAGTGAGAGCAGCGAAGAGGAATATAACTGGAGAAACTATCAGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS GCA 72 bp | AGCAGAGACGATGATTCCATCCAACGACTGGAAAACTaGTCCTTTGAATATCTCACTGGTGAAGGCGACCAG | + |
|
Preference number: 6 (lower is better) Translates to: SRDDDSIQRLEN*SFEYLTGEGDQ Trigger: CTGGTCGCCTTCACCAGTGAGATATTCAAAGGAGCAGTTTTCCAGTCGTTGGATGGAATCATCGTCTCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CCA 72 bp | GGCTATTTTTGTACCGAATGGACCTTACTGTCTCAGTaGACTGCCTTAGGTTATTCCGTCTGCCAGAGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: GYFCTEWTLLSQ*TALGYSVCQRV Trigger: CACTCTCTGGCAGACGGAATAACCTAAGGCAGTCCACTGAGACAGTAAGGTCCATTCGGTACAAAAATAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CCA 72 bp | CTAGATGAAAAGGTAAAAATGTCCTTGGGAGCCCTCTaGGTTTCCTCTGCCTGGTCATGTTCACTGTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LDEKVKMSLGAL*VSSAWSCSLSL Trigger: CAAGGACAGTGAACATGACCAGGCAGAGGAAACCCAGAGGGCTCCCAAGGACATTTTTACCTTTTCATCTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CCA 72 bp | CATGTTCAGCCAGTCTCGAGGGTTAGATGGAGAAGGTaGATTCATTTCTTTCTGATAGTGACGGCCCTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: HVQPVSRVRWRR*IHFFLIVTALV Trigger: AACCAGGGCCGTCACTATCAGAAAGAAATGAATCCACCTTCTCCATCTAACCCTCGAGACTGGCTGAACATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CCA 72 bp | TTTGCCAGTCTGAGGGTCAAAGTAGCAGTTGAGACATaGGTCATACAACAGAGTCAGCACTTCCTCGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: FASLRVKVAVET*VIQQSQHFLVF Trigger: GAAGACGAGGAAGTGCTGACTCTGTTGTATGACCCATGTCTCAACTGCTACTTTGACCCTCAGACTGGCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CAA 90 bp | TTAGCAGAGACGATGATTCCATCCAACGACTGGAAAACTGCTCCTTaGAATATCTCACTGGTGAAGGCGACCAGGTCAATGCACAAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LAETMIPSNDWKTAP*NISLVKATRSMHKL Trigger: CAACTTGTGCATTGACCTGGTCGCCTTCACCAGTGAGATATTCAAAGGAGCAGTTTTCCAGTCGTTGGATGGAATCATCGTCTCTGCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS TCA 72 bp | CGTAGTATTTGCCAGTCTGAGGGTCAAAGTAGCAGTTaGGACATGGGTCATACAACAGAGTCAGCACTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: RSICQSEGQSSS*DMGHTTESALP Trigger: AGGAAGTGCTGACTCTGTTGTATGACCCATGTCTCAACTGCTACTTTGACCCTCAGACTGGCAAATACTACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CCA 72 bp | ATCAGTCCAAGGATTTGCTTATTCTCCTTCGGTAACTaGATTCTGTTGGTTTGGCTGCTGCCTTCCAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: ISPRICLFSFGN*ILLVWLLPSRT Trigger: TGTCCTGGAAGGCAGCAGCCAAACCAACAGAATCCAGTTACCGAAGGAGAATAAGCAAATCCTTGGACTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CCA 72 bp | TGGGCTCAACATGTTCAGCCAGTCTCGAGGGTTAGATaGAGAAGGTGGATTCATTTCTTTCTGATAGTGACG | + |
|
Preference number: 6 (lower is better) Translates to: WAQHVQPVSRVR*RRWIHFFLIVT Trigger: CGTCACTATCAGAAAGAAATGAATCCACCTTCTCCATCTAACCCTCGAGACTGGCTGAACATGTTGAGCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CCA 72 bp | TCCGTACTGTTAACACTCCTCTCTTCTGTAGGCTGCTaGCACAATTGGCTATTTTTGTACCGAATGGACCTT | + |
|
Preference number: 6 (lower is better) Translates to: SVLLTLLSSVGC*HNWLFLYRMDL Trigger: AAGGTCCATTCGGTACAAAAATAGCCAATTGTGCCAGCAGCCTACAGAAGAGAGGAGTGTTAACAGTACGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CAA 72 bp | GTTAACACTCCTCTCTTCTGTAGGCTGCTGGCACAATaGGCTATTTTTGTACCGAATGGACCTTACTGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: VNTPLFCRLLAQ*AIFVPNGPYCL Trigger: GAGACAGTAAGGTCCATTCGGTACAAAAATAGCCAATTGTGCCAGCAGCCTACAGAAGAGAGGAGTGTTAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CCA 72 bp | GGATTTGCTTATTCTCCTTCGGTAACTGGATTCTGTTaGTTTGGCTGCTGCCTTCCAGGACAAATACAAAAC | + |
|
Preference number: 6 (lower is better) Translates to: GFAYSPSVTGFC*FGCCLPGQIQN Trigger: GTTTTGTATTTGTCCTGGAAGGCAGCAGCCAAACCAACAGAATCCAGTTACCGAAGGAGAATAAGCAAATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CCA 72 bp | TTAACACTCCTCTCTTCTGTAGGCTGCTGGCACAATTaGCTATTTTTGTACCGAATGGACCTTACTGTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LTLLSSVGCWHN*LFLYRMDLTVS Trigger: TGAGACAGTAAGGTCCATTCGGTACAAAAATAGCCAATTGTGCCAGCAGCCTACAGAAGAGAGGAGTGTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CCA 72 bp | TTACAGTTAGCAGAGACGATGATTCCATCCAACGACTaGAAAACTGCTCCTTTGAATATCTCACTGGTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LQLAETMIPSND*KTAPLNISLVK Trigger: CTTCACCAGTGAGATATTCAAAGGAGCAGTTTTCCAGTCGTTGGATGGAATCATCGTCTCTGCTAACTGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CAA 72 bp | AGGATTTGCTTATTCTCCTTCGGTAACTGGATTCTGTaGGTTTGGCTGCTGCCTTCCAGGACAAATACAAAA | + |
|
Preference number: 6 (lower is better) Translates to: RICLFSFGNWIL*VWLLPSRTNTK Trigger: TTTTGTATTTGTCCTGGAAGGCAGCAGCCAAACCAACAGAATCCAGTTACCGAAGGAGAATAAGCAAATCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS TCA 72 bp | CAATGCACAAGTTGCACCAAATTTTACGCTGGATCATaGAGAGTGGGATTTTTGCATGAAGAGGTGTTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: QCTSCTKFYAGS*RVGFLHEEVLK Trigger: CTTCAACACCTCTTCATGCAAAAATCCCACTCTTCATGATCCAGCGTAAAATTTGGTGCAACTTGTGCATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CCA 72 bp | TGCTTATTCTCCTTCGGTAACTGGATTCTGTTGGTTTaGCTGCTGCCTTCCAGGACAAATACAAAACTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: CLFSFGNWILLV*LLPSRTNTKLL Trigger: TAAAAGTTTTGTATTTGTCCTGGAAGGCAGCAGCCAAACCAACAGAATCCAGTTACCGAAGGAGAATAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CAA 90 bp | ATCAGTCCAAGGATTTGCTTATTCTCCTTCGGTAACTGGATTCTGTaGGTTTGGCTGCTGCCTTCCAGGACAAATACAAAACTTTTAACT | + |
|
Preference number: 6 (lower is better) Translates to: ISPRICLFSFGNWIL*VWLLPSRTNTKLLT Trigger: AGTTAAAAGTTTTGTATTTGTCCTGGAAGGCAGCAGCCAAACCAACAGAATCCAGTTACCGAAGGAGAATAAGCAAATCCTTGGACTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS TCA 72 bp | ATTTTACGCTGGATCATGAAGAGTGGGATTTTTGCATaGAGAGGTGTTGAAGACACTTCCTTATGGACTGTT | + |
|
Preference number: 6 (lower is better) Translates to: ILRWIMKSGIFA*RGVEDTSLWTV Trigger: AACAGTCCATAAGGAAGTGTCTTCAACACCTCTTCATGCAAAAATCCCACTCTTCATGATCCAGCGTAAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS TCA 72 bp | CTGATGAACTGCTCTGATTCTGCTGATCTTAGAGGATaGCCTCCAAATTTAATTTCAGTTTGGCGGAGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: LMNCSDSADLRG*PPNLISVWRSF Trigger: AAAACTCCGCCAAACTGAAATTAAATTTGGAGGTCATCCTCTAAGATCAGCAGAATCAGAGCAGTTCATCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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| CDS CCA 72 bp | AACATGAGGAACATCTGTTGCAAGTTGACAGCTTCGTaGAATAATATCTGTGGGTTCATCATCTTTATCAGC | + |
|
Preference number: 6 (lower is better) Translates to: NMRNICCKLTAS*NNICGFIIFIS Trigger: GCTGATAAAGATGATGAACCCACAGATATTATTCCACGAAGCTGTCAACTTGCAACAGATGTTCCTCATGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102996.4 |
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