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Pregenerated sensors for CFAP157 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000038987

Ensembl transcript IDs: ENSMUST00000102813.2

Found 186 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTCCCTGGGTTTCCCCAGGCTACTTGCAGATTCAAGGAGGGACTGTaGCCACATCAGTCTGTTTCTGCAGCAGCTTGGTCTCCCCGTTCG +
Preference number: 1 (lower is better)
Translates to: FPGFPQATCRFKEGL*PHQSVSAAAWSPRS
Trigger: CGAACGGGGAGACCAAGCTGCTGCAGAAACAGACTGATGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAGCCTGGGGAAACCCAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
3UTR CCA 72 bp TTTCCCCAGGCTACTTGCAGATTCAAGGAGGGACTGTaGCCACATCAGTCTGTTTCTGCAGCAGCTTGGTCT +
Preference number: 3 (lower is better)
Translates to: FPQATCRFKEGL*PHQSVSAAAWS
Trigger: AGACCAAGCTGCTGCAGAAACAGACTGATGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAGCCTGGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
3UTR GCA 72 bp TGTTTATATAACTTCCCTGGGTTTCCCCAGGCTACTTaGAGATTCAAGGAGGGACTGTGGCCACATCAGTCT +
Preference number: 3 (lower is better)
Translates to: CLYNFPGFPQAT*RFKEGLWPHQS
Trigger: AGACTGATGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAGCCTGGGGAAACCCAGGGAAGTTATATAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CCA 90 bp CTTCCCTGGGTTTCCCCAGGCTACTTGCAGATTCAAGGAGGGACTGTGGCCACACGCACCTGGGCCAGTTaGGCCTCGAACGCGTCCTTC +
Preference number: 4 (lower is better)
Translates to: LPWVSPGYLQIQGGTVATRTWAS*ASNASF
Trigger: GAAGGACGCGTTCGAGGCCCAACTGGCCCAGGTGCG...TGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAGCCTGGGGAAACCCAGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR GCA 90 bp GGTTTCCCCAGGCTACTTGCAGATTCAAGGAGGGACTGTGGCCACATCAGTCTGGATAGGCCCTGGGGCTaGTTGTCCTGGTGGGAACCC +
Preference number: 4 (lower is better)
Translates to: GFPRLLADSRRDCGHISLDRPWG*LSWWEP
Trigger: GGGTTCCCACCAGGACAAGCAGCCCCAGGGCCTATC...CAGACTGATGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAGCCTGGGGAAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CCA 90 bp TCCCTGGGTTTCCCCAGGCTACTTGCAGATTCAAGGAGGGACTGTGGCCACATCGGCTGCTTGTCCTGGTaGGAACCCATGTCCGGCTGT +
Preference number: 4 (lower is better)
Translates to: SLGFPRLLADSRRDCGHIGCLSW*EPMSGC
Trigger: ACAGCCGGACATGGGTTCCCACCAGGACAAGCAGCC...GATGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAGCCTGGGGAAACCCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CCA 90 bp GGTTTCCCCAGGCTACTTGCAGATTCAAGGAGGGACTGTGGCCACATCAGTCTGTGGGGCTGCTTGTCCTaGTGGGAACCCATGTCCGGC +
Preference number: 4 (lower is better)
Translates to: GFPRLLADSRRDCGHISLWGCLS*WEPMSG
Trigger: GCCGGACATGGGTTCCCACCAGGACAAGCAGCCCCA...CAGACTGATGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAGCCTGGGGAAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CCA 90 bp CTGGGTTTCCCCAGGCTACTTGCAGATTCAAGGAGGGACTGTGGCCACATCAGTCTAGGATGGCCCGCCTaGTCGTCTCCCACATCTGGT +
Preference number: 4 (lower is better)
Translates to: LGFPRLLADSRRDCGHISLGWPA*SSPTSG
Trigger: ACCAGATGTGGGAGACGACCAGGCGGGCCATCCTAG...ACTGATGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAGCCTGGGGAAACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CCA 90 bp TCCCTGGGTTTCCCCAGGCTACTTGCAGATTCAAGGAGGGACTGTGGCCACATCTCTTTGGATAGGCCCTaGGGCTGCTTGTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: SLGFPRLLADSRRDCGHISLDRP*GCLSWW
Trigger: CCACCAGGACAAGCAGCCCCAGGGCCTATCCAAAGA...GATGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAGCCTGGGGAAACCCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR TCA 90 bp GATTCAAGGAGGGACTGTGGCCACATCAGTCTGTTTCTGCAGCAGCTTGGTCTCGGTTCAGCGTGCGCTTaGGGAAGGCCACAATCTCCT +
Preference number: 4 (lower is better)
Translates to: DSRRDCGHISLFLQQLGLGSACA*GRPQSP
Trigger: AGGAGATTGTGGCCTTCCTCAAGCGCACGCTGAACC...GAGACCAAGCTGCTGCAGAAACAGACTGATGTGGCCACAGTCCCTCCTTGAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR GCA 90 bp CTGGGTTTCCCCAGGCTACTTGCAGATTCAAGGAGGGACTGTGGCCACATCAGTTGCCCCCTATCTTCTTaGCCTGCATCTCCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: LGFPRLLADSRRDCGHISCPLSS*PASPCL
Trigger: GAGGCAAGGAGATGCAGGGCAAGAAGATAGGGGGCA...ACTGATGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAGCCTGGGGAAACCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR GCA 90 bp CCTGGGTTTCCCCAGGCTACTTGCAGATTCAAGGAGGGACTGTGGCCACATCAGCACTGGCATCCTTCTTaGCCCCTATCTTCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: PGFPQATCRFKEGLWPHQHWHPS*PLSSCP
Trigger: AGGGCAAGAAGATAGGGGGCAAGAAGGATGCCAGTG...CTGATGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAGCCTGGGGAAACCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR GCA 90 bp TTCAAGGAGGGACTGTGGCCACATCAGTCTGTTTCTGCAGCAGCTTGGTCTCCCAATACCAGCAGTTGCTaGAGCAGCTCCTTGCGCTGC +
Preference number: 4 (lower is better)
Translates to: FKEGLWPHQSVSAAAWSPNTSSC*SSSLRC
Trigger: GCAGCGCAAGGAGCTGCTGCAGCAACTGCTGGTATT...GGGAGACCAAGCTGCTGCAGAAACAGACTGATGTGGCCACAGTCCCTCCTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CCA 90 bp ATTCAAGGAGGGACTGTGGCCACATCAGTCTGTTTCTGCAGCAGCTTGGTCTCCGTGCCCTTTCTCTGTTaGCGGCACTTCTCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: IQGGTVATSVCFCSSLVSVPFLC*RHFSVS
Trigger: GCTGACCGAGAAGTGCCGCCAACAGAGAAAGGGCAC...GGAGACCAAGCTGCTGCAGAAACAGACTGATGTGGCCACAGTCCCTCCTTGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR TCA 90 bp CCCAGGCTACTTGCAGATTCAAGGAGGGACTGTGGCCACATCAGTCTGTTTCTGTGTTCTGGGTGCCCTTaGGCTGCTCATTCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: PRLLADSRRDCGHISLFLCSGCP*AAHSPA
Trigger: TGCAGGAGAATGAGCAGCTCAAGGGCACCCAGAACA...CAGAAACAGACTGATGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAGCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR TCA 90 bp CCCTGGGTTTCCCCAGGCTACTTGCAGATTCAAGGAGGGACTGTGGCCACATCATTTCAAAACCACCCCTaGGCTGAGCAATACCAGCAG +
Preference number: 4 (lower is better)
Translates to: PWVSPGYLQIQGGTVATSFQNHP*AEQYQQ
Trigger: CTGCTGGTATTGCTCAGCTCAGGGGTGGTTTTGAAA...TGATGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAGCCTGGGGAAACCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CCA 90 bp CTACTTGCAGATTCAAGGAGGGACTGTGGCCACATCAGTCTGTTTCTGCAGCAGCACCATGGCCAACTCTaGAGTCTTGGTCCCACTGGC +
Preference number: 4 (lower is better)
Translates to: LLADSRRDCGHISLFLQQHHGQL*SLGPTG
Trigger: GCCAGTGGGACCAAGACTCCAGAGTTGGCCATGGTG...CTGCTGCAGAAACAGACTGATGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CCA 90 bp GGTTTCCCCAGGCTACTTGCAGATTCAAGGAGGGACTGTGGCCACATCAGTCTGATCTCATCCACCTTCTaGTTCAGCGTGCGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: GFPRLLADSRRDCGHISLISSTF*FSVRLR
Trigger: CCTCAAGCGCACGCTGAACCAGAAGGTGGATGAGAT...CAGACTGATGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAGCCTGGGGAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CCA 90 bp CCTGGGTTTCCCCAGGCTACTTGCAGATTCAAGGAGGGACTGTGGCCACATCAGTGGTCCTTGATTTCCTaGAATTCATGGCGCACCTGG +
Preference number: 4 (lower is better)
Translates to: PGFPQATCRFKEGLWPHQWSLIS*NSWRTW
Trigger: CCAGGTGCGCCATGAATTCCAGGAAATCAAGGACCA...CTGATGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAGCCTGGGGAAACCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CCA 90 bp ATTCAAGGAGGGACTGTGGCCACATCAGTCTGTTTCTGCAGCAGCTTGGTCTCCGTCGTCTCCCACATCTaGTTGGTGGCCATCTTTCGG +
Preference number: 4 (lower is better)
Translates to: IQGGTVATSVCFCSSLVSVVSHI*LVAIFR
Trigger: CCGAAAGATGGCCACCAACCAGATGTGGGAGACGAC...GGAGACCAAGCTGCTGCAGAAACAGACTGATGTGGCCACAGTCCCTCCTTGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CCA 90 bp CCCTGGGTTTCCCCAGGCTACTTGCAGATTCAAGGAGGGACTGTGGCCACATCACAGCCCAAGATCCCCTaGCTTATAGGTTGTGATGGT +
Preference number: 4 (lower is better)
Translates to: PWVSPGYLQIQGGTVATSQPKIP*LIGCDG
Trigger: ACCATCACAACCTATAAGCCAGGGGATCTTGGGCTG...TGATGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAGCCTGGGGAAACCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR GCA 90 bp AGGCTACTTGCAGATTCAAGGAGGGACTGTGGCCACATCAGTCTGTTTCTGCAGGCCACCTCCAGGCTCTaGAGCTGGTCATTAAGGTCT +
Preference number: 4 (lower is better)
Translates to: RLLADSRRDCGHISLFLQATSRL*SWSLRS
Trigger: AGACCTTAATGACCAGCTGCAGAGCCTGGAGGTGGC...CTGCAGAAACAGACTGATGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR GCA 90 bp CCCAGGCTACTTGCAGATTCAAGGAGGGACTGTGGCCACATCAGTCTGTTTCTGGTGAGCTCCTCTTTCTaGAGCCGGAATTCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: PRLLADSRRDCGHISLFLVSSSF*SRNSSR
Trigger: CCTGGAAGAATTCCGGCTGCAGAAAGAGGAGCTCAC...CAGAAACAGACTGATGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAGCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR GCA 90 bp CTACTTGCAGATTCAAGGAGGGACTGTGGCCACATCAGTCTGTTTCTGCAGCAGTTCTCCTGCAGCAGCTaGACACCATGCTTGGACACC +
Preference number: 4 (lower is better)
Translates to: LLADSRRDCGHISLFLQQFSCSS*TPCLDT
Trigger: GGTGTCCAAGCATGGTGTGCAGCTGCTGCAGGAGAA...CTGCTGCAGAAACAGACTGATGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR GCA 90 bp CCCAGGCTACTTGCAGATTCAAGGAGGGACTGTGGCCACATCAGTCTGTTTCTGCGATTTGCCTCTGCCTaGTTCTCCTTCAGTTGCGCT +
Preference number: 4 (lower is better)
Translates to: PRLLADSRRDCGHISLFLRFASA*FSFSCA
Trigger: AGCGCAACTGAAGGAGAAGCAGGCAGAGGCAAATCG...CAGAAACAGACTGATGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAGCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR GCA 90 bp CTACTTGCAGATTCAAGGAGGGACTGTGGCCACATCAGTCTGTTTCTGCAGCAGATGGTCGAGAGCTGCTaGAGCAGAGAAACAGCCCCT +
Preference number: 4 (lower is better)
Translates to: LLADSRRDCGHISLFLQQMVESC*SRETAP
Trigger: AGGGGCTGTTTCTCTGCTGCAGCAGCTCTCGACCAT...CTGCTGCAGAAACAGACTGATGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR GCA 90 bp CCCAATGTTTATATAACTTCCCTGGGTTTCCCCAGGCTACTTGCAGATTCAAGGGCTCCGTCTCCTCTGTaGCCTTTCTCTGTTGGCGGC +
Preference number: 4 (lower is better)
Translates to: PNVYITSLGFPRLLADSRAPSPL*PFSVGG
Trigger: GCCGCCAACAGAGAAAGGGCACAGAGGAGACGGAGC...CCTTGAATCTGCAAGTAGCCTGGGGAAACCCAGGGAAGTTATATAAACATTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR GCA 90 bp ATAACTTCCCTGGGTTTCCCCAGGCTACTTGCAGATTCAAGGAGGGACTGTGGCTCCTCCGCCTCTGTTTaGATGTGCACAATGTCCTGT +
Preference number: 4 (lower is better)
Translates to: ITSLGFPRLLADSRRDCGSSASV*MCTMSC
Trigger: ACAGGACATTGTGCACATGCAAACAGAGGCGGAGGA...GCCACAGTCCCTCCTTGAATCTGCAAGTAGCCTGGGGAAACCCAGGGAAGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CCA 90 bp CCCAGGCTACTTGCAGATTCAAGGAGGGACTGTGGCCACATCAGTCTGTTTCTGTCTCCTTCTTGTTGTTaGCCAGCTGCTCGAACTCCT +
Preference number: 4 (lower is better)
Translates to: PRLLADSRRDCGHISLFLSPSCC*PAARTP
Trigger: AGGAGTTCGAGCAGCTGGCCAACAACAAGAAGGAGA...CAGAAACAGACTGATGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAGCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CCA 90 bp AGGCTACTTGCAGATTCAAGGAGGGACTGTGGCCACATCAGTCTGTTTCTGCAGATTTCCTGGAATTCATaGCGCACCTGGGCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: RLLADSRRDCGHISLFLQISWNS*RTWASW
Trigger: CCAACTGGCCCAGGTGCGCCATGAATTCCAGGAAAT...CTGCAGAAACAGACTGATGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CCA 90 bp CAGGCTACTTGCAGATTCAAGGAGGGACTGTGGCCACATCAGTCTGTTTCTGCATCTTTCGGAACTCTGTaGCCACCAGGTTCACACGCT +
Preference number: 4 (lower is better)
Translates to: QATCRFKEGLWPHQSVSASFGTL*PPGSHA
Trigger: AGCGTGTGAACCTGGTGGCCACAGAGTTCCGAAAGA...TGCAGAAACAGACTGATGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CCA 90 bp AGGCTACTTGCAGATTCAAGGAGGGACTGTGGCCACATCAGTCTGTTTCTGCAGCCCACATCTGGTTGGTaGCCATCTTTCGGAACTCTG +
Preference number: 4 (lower is better)
Translates to: RLLADSRRDCGHISLFLQPTSGW*PSFGTL
Trigger: CAGAGTTCCGAAAGATGGCCACCAACCAGATGTGGG...CTGCAGAAACAGACTGATGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CCA 90 bp CTACTTGCAGATTCAAGGAGGGACTGTGGCCACATCAGTCTGTTTCTGCAGCAGCTGGCCATGATCTCTTaGGTGTTCTCCAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: LLADSRRDCGHISLFLQQLAMIS*VFSSIS
Trigger: GGAGATGCTGGAGAACACCCAAGAGATCATGGCCAG...CTGCTGCAGAAACAGACTGATGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CCA 90 bp CCCAGGCTACTTGCAGATTCAAGGAGGGACTGTGGCCACATCAGTCTGTTTCTGTCCCTCTGCACATTCTaGAAGTTCTGCTCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: PRLLADSRRDCGHISLFLSLCTF*KFCSSW
Trigger: CCAACTGGAGCAGAACTTCCAGAATGTGCAGAGGGA...CAGAAACAGACTGATGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAGCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CCA 90 bp CCCAATGTTTATATAACTTCCCTGGGTTTCCCCAGGCTACTTGCAGATTCAAGGAGGGGCCTGAGATCCTaGGGTTTGAGTGGGATGCGG +
Preference number: 4 (lower is better)
Translates to: PNVYITSLGFPRLLADSRRGLRS*GLSGMR
Trigger: CCGCATCCCACTCAAACCCCAGGATCTCAGGCCCCT...CCTTGAATCTGCAAGTAGCCTGGGGAAACCCAGGGAAGTTATATAAACATTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR GCA 90 bp GGTACCCAATGTTTATATAACTTCCCTGGGTTTCCCCAGGCTACTTGCAGATTCGCTGCAGCAGCTCCTTaGGCTGCAGTTGGAACACCA +
Preference number: 4 (lower is better)
Translates to: GTQCLYNFPGFPQATCRFAAAAP*AAVGTP
Trigger: TGGTGTTCCAACTGCAGCGCAAGGAGCTGCTGCAGC...GAATCTGCAAGTAGCCTGGGGAAACCCAGGGAAGTTATATAAACATTGGGTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CCA 90 bp CACAGTGGTACCCAATGTTTATATAACTTCCCTGGGTTTCCCCAGGCTACTTGCGAGTCTTGGTCCCACTaGCATCCTTCTTGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: HSGTQCLYNFPGFPQATCESWSH*HPSCPL
Trigger: TAGGGGGCAAGAAGGATGCCAGTGGGACCAAGACTC...GCAAGTAGCCTGGGGAAACCCAGGGAAGTTATATAAACATTGGGTACCACTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR TCA 90 bp TGTTTATATAACTTCCCTGGGTTTCCCCAGGCTACTTGCAGATTCAAGGAGGGACCAAGTACTTCTCCGTaGGCTCCTCTTTCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: CLYNFPGFPQATCRFKEGPSTSP*APLSAA
Trigger: GGCTGCAGAAAGAGGAGCTCACGGAGAAGTACTTGG...TCCCTCCTTGAATCTGCAAGTAGCCTGGGGAAACCCAGGGAAGTTATATAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR GCA 90 bp AGTGGTACCCAATGTTTATATAACTTCCCTGGGTTTCCCCAGGCTACTTGCAGAGAGCTGCTCCTCCAGTaGCAAGTACTTCTCCGTGAG +
Preference number: 4 (lower is better)
Translates to: SGTQCLYNFPGFPQATCRELLLQ*QVLLRE
Trigger: CTCACGGAGAAGTACTTGGCACTGGAGGAGCAGCTC...TCTGCAAGTAGCCTGGGGAAACCCAGGGAAGTTATATAAACATTGGGTACCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR GCA 90 bp GTGGTACCCAATGTTTATATAACTTCCCTGGGTTTCCCCAGGCTACTTGCAGATTCCTGCCTATGGAGCTaGTCCTCCAGTGCCAAGTAC +
Preference number: 4 (lower is better)
Translates to: VVPNVYITSLGFPRLLADSCLWS*SSSAKY
Trigger: GTACTTGGCACTGGAGGAGCAGCTCCATAGGCAGGA...ATCTGCAAGTAGCCTGGGGAAACCCAGGGAAGTTATATAAACATTGGGTACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR GCA 90 bp GGTACCCAATGTTTATATAACTTCCCTGGGTTTCCCCAGGCTACTTGCAGATTCAGCTGCTCATTCTCCTaGAGCAGCTGCACACCATGC +
Preference number: 4 (lower is better)
Translates to: GTQCLYNFPGFPQATCRFSCSFS*SSCTPC
Trigger: GCATGGTGTGCAGCTGCTGCAGGAGAATGAGCAGCT...GAATCTGCAAGTAGCCTGGGGAAACCCAGGGAAGTTATATAAACATTGGGTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR GCA 90 bp ACCCAATGTTTATATAACTTCCCTGGGTTTCCCCAGGCTACTTGCAGATTCAAGTGGGTGCCCTTGAGCTaGTCATTCTCCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TQCLYNFPGFPQATCRFKWVPLS*SFSCSS
Trigger: GCTGCTGCAGGAGAATGAGCAGCTCAAGGGCACCCA...CTTGAATCTGCAAGTAGCCTGGGGAAACCCAGGGAAGTTATATAAACATTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR GCA 90 bp CCCAATGTTTATATAACTTCCCTGGGTTTCCCCAGGCTACTTGCAGATTCAAGGAGCAATACCAGCAGTTaGTGCAGCAGCTCCTTGCGC +
Preference number: 4 (lower is better)
Translates to: PNVYITSLGFPRLLADSRSNTSS*CSSSLR
Trigger: GCGCAAGGAGCTGCTGCAGCAACTGCTGGTATTGCT...CCTTGAATCTGCAAGTAGCCTGGGGAAACCCAGGGAAGTTATATAAACATTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CCA 90 bp CCCAATGTTTATATAACTTCCCTGGGTTTCCCCAGGCTACTTGCAGATTCAAGGTCAGCTCCTCCACCATaGCCAACTCTGGAGTCTTGG +
Preference number: 4 (lower is better)
Translates to: PNVYITSLGFPRLLADSRSAPPP*PTLESW
Trigger: CCAAGACTCCAGAGTTGGCCATGGTGGAGGAGCTGA...CCTTGAATCTGCAAGTAGCCTGGGGAAACCCAGGGAAGTTATATAAACATTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CCA 90 bp GTGGTACCCAATGTTTATATAACTTCCCTGGGTTTCCCCAGGCTACTTGCAGATCCTTCTCCATATCCTTaGCCACCTCCAGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: VVPNVYITSLGFPRLLADPSPYP*PPPGSA
Trigger: TGCAGAGCCTGGAGGTGGCCAAGGATATGGAGAAGG...ATCTGCAAGTAGCCTGGGGAAACCCAGGGAAGTTATATAAACATTGGGTACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CCA 90 bp AGTGGTACCCAATGTTTATATAACTTCCCTGGGTTTCCCCAGGCTACTTGCAGATGGCACAGCTTGTTCTaGGTGCCCTTGAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SGTQCLYNFPGFPQATCRWHSLF*VPLSCS
Trigger: TGAGCAGCTCAAGGGCACCCAGAACAAGCTGTGCCA...TCTGCAAGTAGCCTGGGGAAACCCAGGGAAGTTATATAAACATTGGGTACCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR GCA 90 bp CACAGTGGTACCCAATGTTTATATAACTTCCCTGGGTTTCCCCAGGCTACTTGCTGCCCTGCATCTCCTTaGCTCCTTTGTTTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: HSGTQCLYNFPGFPQATCCPASP*LLCLAS
Trigger: AGAAGCCAAACAAAGGAGGCAAGGAGATGCAGGGCA...GCAAGTAGCCTGGGGAAACCCAGGGAAGTTATATAAACATTGGGTACCACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CCA 90 bp CACAGTGGTACCCAATGTTTATATAACTTCCCTGGGTTTCCCCAGGCTACTTGCTCCAGGCTCTGCAGCTaGTCATTAAGGTCTGTGATC +
Preference number: 4 (lower is better)
Translates to: HSGTQCLYNFPGFPQATCSRLCS*SLRSVI
Trigger: GATCACAGACCTTAATGACCAGCTGCAGAGCCTGGA...GCAAGTAGCCTGGGGAAACCCAGGGAAGTTATATAAACATTGGGTACCACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CCA 90 bp CACAGTGGTACCCAATGTTTATATAACTTCCCTGGGTTTCCCCAGGCTACTTGCTCTCCCACATCTGGTTaGTGGCCATCTTTCGGAACT +
Preference number: 4 (lower is better)
Translates to: HSGTQCLYNFPGFPQATCSPTSG*WPSFGT
Trigger: AGTTCCGAAAGATGGCCACCAACCAGATGTGGGAGA...GCAAGTAGCCTGGGGAAACCCAGGGAAGTTATATAAACATTGGGTACCACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CCA 90 bp ATAACTTCCCTGGGTTTCCCCAGGCTACTTGCAGATTCAAGGAGGGACTGTGGCTTTGAGAGCTCCAGATaGGTAGATCTCATTCGTGTT +
Preference number: 4 (lower is better)
Translates to: ITSLGFPRLLADSRRDCGFESSR*VDLIRV
Trigger: AACACGAATGAGATCTACCCATCTGGAGCTCTCAAA...GCCACAGTCCCTCCTTGAATCTGCAAGTAGCCTGGGGAAACCCAGGGAAGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR TCA 90 bp CAATGTTTATATAACTTCCCTGGGTTTCCCCAGGCTACTTGCAGATTCAAGGAGAAACCACCCCTGAGCTaGGCAATACCAGCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: QCLYNFPGFPQATCRFKEKPPLS*AIPAVA
Trigger: AGCAACTGCTGGTATTGCTCAGCTCAGGGGTGGTTT...CTCCTTGAATCTGCAAGTAGCCTGGGGAAACCCAGGGAAGTTATATAAACATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CCA 90 bp ACAGTGGTACCCAATGTTTATATAACTTCCCTGGGTTTCCCCAGGCTACTTGCAGCTGCACACCATGCTTaGACACCTTGTTTAGCTGCA +
Preference number: 4 (lower is better)
Translates to: TVVPNVYITSLGFPRLLAAAHHA*TPCLAA
Trigger: TGCAGCTAAACAAGGTGTCCAAGCATGGTGTGCAGC...TGCAAGTAGCCTGGGGAAACCCAGGGAAGTTATATAAACATTGGGTACCACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR GCA 90 bp CTACTTGCAGATTCAAGGAGGGACTGTGGCCACATCAGTCTGTTTCTGCAGCAGAGGATAATCTTCTTATaGCCTATGTTCTTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: LLADSRRDCGHISLFLQQRIIFL*PMFFLA
Trigger: GGCCAGAAAGAACATAGGGCATAAGAAGATTATCCT...CTGCTGCAGAAACAGACTGATGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR GCA 90 bp AATGTTTATATAACTTCCCTGGGTTTCCCCAGGCTACTTGCAGATTCAAGGAGGGTCTGGTTGTCCCTCTaGACATTCTGGAAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: NVYITSLGFPRLLADSRRVWLSL*TFWKFC
Trigger: GCAGAACTTCCAGAATGTGCAGAGGGACAACCAGAC...CCTCCTTGAATCTGCAAGTAGCCTGGGGAAACCCAGGGAAGTTATATAAACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR GCA 90 bp ACCCAATGTTTATATAACTTCCCTGGGTTTCCCCAGGCTACTTGCAGATTCAAGTGCTTCTCCTTCAGTTaGGCTTCCAGCTGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: TQCLYNFPGFPQATCRFKCFSFS*ASSWSF
Trigger: GAAAGACCAGCTGGAAGCGCAACTGAAGGAGAAGCA...CTTGAATCTGCAAGTAGCCTGGGGAAACCCAGGGAAGTTATATAAACATTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CCA 90 bp TGTTTATATAACTTCCCTGGGTTTCCCCAGGCTACTTGCAGATTCAAGGAGGGAACCAGGTTCACACGCTaGATAATCTCTTTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: CLYNFPGFPQATCRFKEGTRFTR*IISFLS
Trigger: GCTGAGGAAAGAGATTATCCAGCGTGTGAACCTGGT...TCCCTCCTTGAATCTGCAAGTAGCCTGGGGAAACCCAGGGAAGTTATATAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR TCA 90 bp AATGTTTATATAACTTCCCTGGGTTTCCCCAGGCTACTTGCAGATTCAAGGAGGTGTTCTTTCTGGCCATaGTCTCTTGGGTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: NVYITSLGFPRLLADSRRCSFWP*SLGCSP
Trigger: TGGAGAACACCCAAGAGATCATGGCCAGAAAGAACA...CCTCCTTGAATCTGCAAGTAGCCTGGGGAAACCCAGGGAAGTTATATAAACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR GCA 90 bp CAGGCTACTTGCAGATTCAAGGAGGGACTGTGGCCACATCAGTCTGTTTCTGCAGACTGTTTTAAGGTTTaGCCGAATTTTCTGTTCCTT +
Preference number: 4 (lower is better)
Translates to: QATCRFKEGLWPHQSVSADCFKV*PNFLFL
Trigger: AAGGAACAGAAAATTCGGGCAAACCTTAAAACAGTC...TGCAGAAACAGACTGATGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CCA 90 bp ACAGTGGTACCCAATGTTTATATAACTTCCCTGGGTTTCCCCAGGCTACTTGCATTCTCTGTGGTGAGCTaGTCCTTGATTTCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: TVVPNVYITSLGFPRLLAFSVVS*SLISWN
Trigger: ATTCCAGGAAATCAAGGACCAGCTCACCACAGAGAA...TGCAAGTAGCCTGGGGAAACCCAGGGAAGTTATATAAACATTGGGTACCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CAA 90 bp CCTGGGTTTCCCCAGGCTACTTGCAGATTCAAGGAGGGACTGTGGCCACATCAGCAGCAGGAGGCGCAGTaGCTCCGTCTCCTCTGTGCC +
Preference number: 5 (lower is better)
Translates to: PGFPQATCRFKEGLWPHQQQEAQ*LRLLCA
Trigger: GGCACAGAGGAGACGGAGCAACTGCGCCTCCTGCTG...CTGATGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAGCCTGGGGAAACCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CAA 90 bp CTTCCCTGGGTTTCCCCAGGCTACTTGCAGATTCAAGGAGGGACTGTGGCCACAAGGCCCTGGGGCTGCTaGTCCTGGTGGGAACCCATG +
Preference number: 5 (lower is better)
Translates to: LPWVSPGYLQIQGGTVATRPWGC*SWWEPM
Trigger: CATGGGTTCCCACCAGGACAAGCAGCCCCAGGGCCT...TGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAGCCTGGGGAAACCCAGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CCA 90 bp ATCCCGAGGGCGATGTTCTCTGTGGTGAGCTGGTCCTTGATTTCCTaGAATTCATGGCGCACCTGGGCCAGTTGGGCCTCGAACGCGTCC +
Preference number: 5 (lower is better)
Translates to: IPRAMFSVVSWSLIS*NSWRTWASWASNAS
Trigger: GGACGCGTTCGAGGCCCAACTGGCCCAGGTGCGCCATGAATTCCAGGAAATCAAGGACCAGCTCACCACAGAGAACATCGCCCTCGGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CCA 90 bp GAGTGGGATGCGGACCGGACGTCGAGGCACCAGCCCAAGATCCCCTaGCTTATAGGTTGTGATGGTCGAGAGCTGCTGCAGCAGAGAAAC +
Preference number: 5 (lower is better)
Translates to: EWDADRTSRHQPKIP*LIGCDGRELLQQRN
Trigger: GTTTCTCTGCTGCAGCAGCTCTCGACCATCACAACCTATAAGCCAGGGGATCTTGGGCTGGTGCCTCGACGTCCGGTCCGCATCCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CCA 90 bp TGTTCTCTAGGATGGCCCGCCTGGTCGTCTCCCACATCTGGTTGGTaGCCATCTTTCGGAACTCTGTGGCCACCAGGTTCACACGCTGGA +
Preference number: 5 (lower is better)
Translates to: CSLGWPAWSSPTSGW*PSFGTLWPPGSHAG
Trigger: TCCAGCGTGTGAACCTGGTGGCCACAGAGTTCCGAAAGATGGCCACCAACCAGATGTGGGAGACGACCAGGCGGGCCATCCTAGAGAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS GCA 90 bp ACATTCTGGAAGTTCTGCTCCAGTTGGGACAGCAGGAGGCGCAGTTaGTCCGTCTCCTCTGTGCCCTTTCTCTGTTGGCGGCACTTCTCG +
Preference number: 5 (lower is better)
Translates to: TFWKFCSSWDSRRRS*SVSSVPFLCWRHFS
Trigger: CGAGAAGTGCCGCCAACAGAGAAAGGGCACAGAGGAGACGGAGCAACTGCGCCTCCTGCTGTCCCAACTGGAGCAGAACTTCCAGAATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS GCA 90 bp TCACTCCTCAGGGTCTGGTTGTCCCTCTGCACATTCTGGAAGTTCTaGTCCAGTTGGGACAGCAGGAGGCGCAGTTGCTCCGTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: SLLRVWLSLCTFWKF*SSWDSRRRSCSVSS
Trigger: AGAGGAGACGGAGCAACTGCGCCTCCTGCTGTCCCAACTGGAGCAGAACTTCCAGAATGTGCAGAGGGACAACCAGACCCTGAGGAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS GCA 90 bp GCTTCCAGCTGGTCTTTCTCACTCCTCAGGGTCTGGTTGTCCCTCTaGACATTCTGGAAGTTCTGCTCCAGTTGGGACAGCAGGAGGCGC +
Preference number: 5 (lower is better)
Translates to: ASSWSFSLLRVWLSL*TFWKFCSSWDSRRR
Trigger: GCGCCTCCTGCTGTCCCAACTGGAGCAGAACTTCCAGAATGTGCAGAGGGACAACCAGACCCTGAGGAGTGAGAAAGACCAGCTGGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS GCA 90 bp CCTGAGCTGAGCAATACCAGCAGTTGCTGCAGCAGCTCCTTGCGCTaGAGTTGGAACACCACATCAAAGTCGCCGTCCTCCGCCTCTGTT +
Preference number: 5 (lower is better)
Translates to: PELSNTSSCCSSSLR*SWNTTSKSPSSASV
Trigger: AACAGAGGCGGAGGACGGCGACTTTGATGTGGTGTTCCAACTGCAGCGCAAGGAGCTGCTGCAGCAACTGCTGGTATTGCTCAGCTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CCA 90 bp CCTTCAGCTCCTCCACCATGGCCAACTCTGGAGTCTTGGTCCCACTaGCATCCTTCTTGCCCCCTATCTTCTTGCCCTGCATCTCCTTGC +
Preference number: 5 (lower is better)
Translates to: PSAPPPWPTLESWSH*HPSCPLSSCPASPC
Trigger: GCAAGGAGATGCAGGGCAAGAAGATAGGGGGCAAGAAGGATGCCAGTGGGACCAAGACTCCAGAGTTGGCCATGGTGGAGGAGCTGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CCA 90 bp TCTGTGGTGAGCTGGTCCTTGATTTCCTGGAATTCATGGCGCACCTaGGCCAGTTGGGCCTCGAACGCGTCCTTCTCCATATCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: SVVSWSLISWNSWRT*ASWASNASFSISLA
Trigger: GGCCAAGGATATGGAGAAGGACGCGTTCGAGGCCCAACTGGCCCAGGTGCGCCATGAATTCCAGGAAATCAAGGACCAGCTCACCACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CCA 90 bp TGTTGTTCTCTAGGATGGCCCGCCTGGTCGTCTCCCACATCTGGTTaGTGGCCATCTTTCGGAACTCTGTGGCCACCAGGTTCACACGCT +
Preference number: 5 (lower is better)
Translates to: CCSLGWPAWSSPTSG*WPSFGTLWPPGSHA
Trigger: AGCGTGTGAACCTGGTGGCCACAGAGTTCCGAAAGATGGCCACCAACCAGATGTGGGAGACGACCAGGCGGGCCATCCTAGAGAACAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CCA 90 bp ACGCTGTTGTTCTCTAGGATGGCCCGCCTGGTCGTCTCCCACATCTaGTTGGTGGCCATCTTTCGGAACTCTGTGGCCACCAGGTTCACA +
Preference number: 5 (lower is better)
Translates to: TLLFSRMARLVVSHI*LVAIFRNSVATRFT
Trigger: TGTGAACCTGGTGGCCACAGAGTTCCGAAAGATGGCCACCAACCAGATGTGGGAGACGACCAGGCGGGCCATCCTAGAGAACAACAGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CCA 90 bp AGGGTCTGGTTGTCCCTCTGCACATTCTGGAAGTTCTGCTCCAGTTaGGACAGCAGGAGGCGCAGTTGCTCCGTCTCCTCTGTGCCCTTT +
Preference number: 5 (lower is better)
Translates to: RVWLSLCTFWKFCSS*DSRRRSCSVSSVPF
Trigger: AAAGGGCACAGAGGAGACGGAGCAACTGCGCCTCCTGCTGTCCCAACTGGAGCAGAACTTCCAGAATGTGCAGAGGGACAACCAGACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CAA 90 bp CTTCCCTGGGTTTCCCCAGGCTACTTGCAGATTCAAGGAGGGACTGTGGCCACAGCCAACTCTGGAGTCTaGGTCCCACTGGCATCCTTC +
Preference number: 5 (lower is better)
Translates to: LPWVSPGYLQIQGGTVATANSGV*VPLASF
Trigger: GAAGGATGCCAGTGGGACCAAGACTCCAGAGTTGGC...TGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAGCCTGGGGAAACCCAGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CAA 90 bp GGTTTCCCCAGGCTACTTGCAGATTCAAGGAGGGACTGTGGCCACATCAGTCTGGAAGTTCTGCTCCAGTaGGGACAGCAGGAGGCGCAG +
Preference number: 5 (lower is better)
Translates to: GFPRLLADSRRDCGHISLEVLLQ*GQQEAQ
Trigger: CTGCGCCTCCTGCTGTCCCAACTGGAGCAGAACTTC...CAGACTGATGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAGCCTGGGGAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CAA 90 bp CCCTGGGTTTCCCCAGGCTACTTGCAGATTCAAGGAGGGACTGTGGCCACATCACTCCTCAGGGTCTGGTaGTCCCTCTGCACATTCTGG +
Preference number: 5 (lower is better)
Translates to: PWVSPGYLQIQGGTVATSLLRVW*SLCTFW
Trigger: CCAGAATGTGCAGAGGGACAACCAGACCCTGAGGAG...TGATGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAGCCTGGGGAAACCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS TCA 90 bp CCTCCTGCCTATGGAGCTGCTCCTCCAGTGCCAAGTACTTCTCCGTaGGCTCCTCTTTCTGCAGCCGGAATTCTTCCAGGGAACTCAGCT +
Preference number: 5 (lower is better)
Translates to: PPAYGAAPPVPSTSP*APLSAAGILPGNSA
Trigger: AGCTGAGTTCCCTGGAAGAATTCCGGCTGCAGAAAGAGGAGCTCACGGAGAAGTACTTGGCACTGGAGGAGCAGCTCCATAGGCAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS GCA 90 bp TTCTCCTGCAGCAGCTGCACACCATGCTTGGACACCTTGTTTAGCTaGAGAGTCACGCTGTTGTTCTCTAGGATGGCCCGCCTGGTCGTC +
Preference number: 5 (lower is better)
Translates to: FSCSSCTPCLDTLFS*RVTLLFSRMARLVV
Trigger: GACGACCAGGCGGGCCATCCTAGAGAACAACAGCGTGACTCTGCAGCTAAACAAGGTGTCCAAGCATGGTGTGCAGCTGCTGCAGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS GCA 90 bp AGCATCTCCAGCTGTTGGCACAGCTTGTTCTGGGTGCCCTTGAGCTaGTCATTCTCCTGCAGCAGCTGCACACCATGCTTGGACACCTTG +
Preference number: 5 (lower is better)
Translates to: SISSCWHSLFWVPLS*SFSCSSCTPCLDTL
Trigger: CAAGGTGTCCAAGCATGGTGTGCAGCTGCTGCAGGAGAATGAGCAGCTCAAGGGCACCCAGAACAAGCTGTGCCAACAGCTGGAGATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CCA 90 bp GCGATGTTCTCTGTGGTGAGCTGGTCCTTGATTTCCTGGAATTCATaGCGCACCTGGGCCAGTTGGGCCTCGAACGCGTCCTTCTCCATA +
Preference number: 5 (lower is better)
Translates to: AMFSVVSWSLISWNS*RTWASWASNASFSI
Trigger: TATGGAGAAGGACGCGTTCGAGGCCCAACTGGCCCAGGTGCGCCATGAATTCCAGGAAATCAAGGACCAGCTCACCACAGAGAACATCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CCA 90 bp TCTTGGGTGTTCTCCAGCATCTCCAGCTGTTGGCACAGCTTGTTCTaGGTGCCCTTGAGCTGCTCATTCTCCTGCAGCAGCTGCACACCA +
Preference number: 5 (lower is better)
Translates to: SWVFSSISSCWHSLF*VPLSCSFSCSSCTP
Trigger: TGGTGTGCAGCTGCTGCAGGAGAATGAGCAGCTCAAGGGCACCCAGAACAAGCTGTGCCAACAGCTGGAGATGCTGGAGAACACCCAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CCA 90 bp TGGTCTTTCTCACTCCTCAGGGTCTGGTTGTCCCTCTGCACATTCTaGAAGTTCTGCTCCAGTTGGGACAGCAGGAGGCGCAGTTGCTCC +
Preference number: 5 (lower is better)
Translates to: WSFSLLRVWLSLCTF*KFCSSWDSRRRSCS
Trigger: GGAGCAACTGCGCCTCCTGCTGTCCCAACTGGAGCAGAACTTCCAGAATGTGCAGAGGGACAACCAGACCCTGAGGAGTGAGAAAGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CCA 90 bp TGCAGCAGAGAAACAGCCCCTTCCTTGGATGTCTGGGTGATGCGTTaGCTTTCTTTGGATAGGCCCTGGGGCTGCTTGTCCTGGTGGGAA +
Preference number: 5 (lower is better)
Translates to: CSRETAPSLDVWVMR*LSLDRPWGCLSWWE
Trigger: TTCCCACCAGGACAAGCAGCCCCAGGGCCTATCCAAAGAAAGCCAACGCATCACCCAGACATCCAAGGAAGGGGCTGTTTCTCTGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CAA 90 bp CTGGGTTTCCCCAGGCTACTTGCAGATTCAAGGAGGGACTGTGGCCACATCAGTTCCTTCTCCATATCCTaGGCCACCTCCAGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: LGFPRLLADSRRDCGHISSFSIS*ATSRLC
Trigger: GCAGAGCCTGGAGGTGGCCAAGGATATGGAGAAGGA...ACTGATGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAGCCTGGGGAAACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CAA 90 bp GGTTTCCCCAGGCTACTTGCAGATTCAAGGAGGGACTGTGGCCACATCAGTCTGGAGCAATACCAGCAGTaGCTGCAGCAGCTCCTTGCG +
Preference number: 5 (lower is better)
Translates to: GFPRLLADSRRDCGHISLEQYQQ*LQQLLA
Trigger: CGCAAGGAGCTGCTGCAGCAACTGCTGGTATTGCTC...CAGACTGATGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAGCCTGGGGAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS GCA 90 bp CCACCATGGCCAACTCTGGAGTCTTGGTCCCACTGGCATCCTTCTTaGCCCCTATCTTCTTGCCCTGCATCTCCTTGCCTCCTTTGTTTG +
Preference number: 5 (lower is better)
Translates to: PPWPTLESWSHWHPS*PLSSCPASPCLLCL
Trigger: CAAACAAAGGAGGCAAGGAGATGCAGGGCAAGAAGATAGGGGGCAAGAAGGATGCCAGTGGGACCAAGACTCCAGAGTTGGCCATGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS GCA 90 bp GTATTCCTTGTACTCGCCCTCCTGCCTATGGAGCTGCTCCTCCAGTaGCAAGTACTTCTCCGTGAGCTCCTCTTTCTGCAGCCGGAATTC +
Preference number: 5 (lower is better)
Translates to: VFLVLALLPMELLLQ*QVLLRELLFLQPEF
Trigger: GAATTCCGGCTGCAGAAAGAGGAGCTCACGGAGAAGTACTTGGCACTGGAGGAGCAGCTCCATAGGCAGGAGGGCGAGTACAAGGAATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS GCA 90 bp AGCTTGTTCTGGGTGCCCTTGAGCTGCTCATTCTCCTGCAGCAGCTaGACACCATGCTTGGACACCTTGTTTAGCTGCAGAGTCACGCTG +
Preference number: 5 (lower is better)
Translates to: SLFWVPLSCSFSCSS*TPCLDTLFSCRVTL
Trigger: CAGCGTGACTCTGCAGCTAAACAAGGTGTCCAAGCATGGTGTGCAGCTGCTGCAGGAGAATGAGCAGCTCAAGGGCACCCAGAACAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CCA 90 bp TGTTTAGCTGCAGAGTCACGCTGTTGTTCTCTAGGATGGCCCGCCTaGTCGTCTCCCACATCTGGTTGGTGGCCATCTTTCGGAACTCTG +
Preference number: 5 (lower is better)
Translates to: CLAAESRCCSLGWPA*SSPTSGWWPSFGTL
Trigger: CAGAGTTCCGAAAGATGGCCACCAACCAGATGTGGGAGACGACCAGGCGGGCCATCCTAGAGAACAACAGCGTGACTCTGCAGCTAAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CCA 90 bp TGGACACCTTGTTTAGCTGCAGAGTCACGCTGTTGTTCTCTAGGATaGCCCGCCTGGTCGTCTCCCACATCTGGTTGGTGGCCATCTTTC +
Preference number: 5 (lower is better)
Translates to: WTPCLAAESRCCSLG*PAWSSPTSGWWPSF
Trigger: GAAAGATGGCCACCAACCAGATGTGGGAGACGACCAGGCGGGCCATCCTAGAGAACAACAGCGTGACTCTGCAGCTAAACAAGGTGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CCA 90 bp AGCCGATTTGCCTCTGCCTGCTTCTCCTTCAGTTGCGCTTCCAGCTaGTCTTTCTCACTCCTCAGGGTCTGGTTGTCCCTCTGCACATTC +
Preference number: 5 (lower is better)
Translates to: SRFASACFSFSCASS*SFSLLRVWLSLCTF
Trigger: GAATGTGCAGAGGGACAACCAGACCCTGAGGAGTGAGAAAGACCAGCTGGAAGCGCAACTGAAGGAGAAGCAGGCAGAGGCAAATCGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CAA 90 bp GGTTTCCCCAGGCTACTTGCAGATTCAAGGAGGGACTGTGGCCACATCAGTCTGTTGCCCCCTATCTTCTaGCCCTGCATCTCCTTGCCT +
Preference number: 5 (lower is better)
Translates to: GFPRLLADSRRDCGHISLLPPIF*PCISLP
Trigger: AGGCAAGGAGATGCAGGGCAAGAAGATAGGGGGCAA...CAGACTGATGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAGCCTGGGGAAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CAA 90 bp GGTACCCAATGTTTATATAACTTCCCTGGGTTTCCCCAGGCTACTTGCAGATTCGCGCACCTGGGCCAGTaGGGCCTCGAACGCGTCCTT +
Preference number: 5 (lower is better)
Translates to: GTQCLYNFPGFPQATCRFAHLGQ*GLERVL
Trigger: AAGGACGCGTTCGAGGCCCAACTGGCCCAGGTGCGC...GAATCTGCAAGTAGCCTGGGGAAACCCAGGGAAGTTATATAAACATTGGGTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CAA 90 bp TTCAAGGAGGGACTGTGGCCACATCAGTCTGTTTCTGCAGCAGCTTGGTCTCCCTTGTTCTGGGTGCCCTaGAGCTGCTCATTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: FKEGLWPHQSVSAAAWSPLFWVP*SCSFSC
Trigger: GCAGGAGAATGAGCAGCTCAAGGGCACCCAGAACAA...GGGAGACCAAGCTGCTGCAGAAACAGACTGATGTGGCCACAGTCCCTCCTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CAA 90 bp CCCTGGGTTTCCCCAGGCTACTTGCAGATTCAAGGAGGGACTGTGGCCACATCATCTGGCCATGATCTCTaGGGTGTTCTCCAGCATCTC +
Preference number: 5 (lower is better)
Translates to: PWVSPGYLQIQGGTVATSSGHDL*GVLQHL
Trigger: GAGATGCTGGAGAACACCCAAGAGATCATGGCCAGA...TGATGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAGCCTGGGGAAACCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS TCA 90 bp AAGGCCACAATCTCCTTCTTGTTGTTGGCCAGCTGCTCGAACTCCTaGTGGAACAGCTTCTCCCGCACAGCCAGTTCATCCCATTTCCGC +
Preference number: 5 (lower is better)
Translates to: KATISFLLLASCSNS*WNSFSRTASSSHFR
Trigger: GCGGAAATGGGATGAACTGGCTGTGCGGGAGAAGCTGTTCCATCAGGAGTTCGAGCAGCTGGCCAACAACAAGAAGGAGATTGTGGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS GCA 90 bp GACTTCTTCTCCAGGTTGTACACGTATTCCTTGTACTCGCCCTCCTaGCTATGGAGCTGCTCCTCCAGTGCCAAGTACTTCTCCGTGAGC +
Preference number: 5 (lower is better)
Translates to: DFFSRLYTYSLYSPS*LWSCSSSAKYFSVS
Trigger: GCTCACGGAGAAGTACTTGGCACTGGAGGAGCAGCTCCATAGGCAGGAGGGCGAGTACAAGGAATACGTGTACAACCTGGAGAAGAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS GCA 90 bp TGGGTGCCCTTGAGCTGCTCATTCTCCTGCAGCAGCTGCACACCATaGTTGGACACCTTGTTTAGCTGCAGAGTCACGCTGTTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: WVPLSCSFSCSSCTP*LDTLFSCRVTLLFS
Trigger: AGAGAACAACAGCGTGACTCTGCAGCTAAACAAGGTGTCCAAGCATGGTGTGCAGCTGCTGCAGGAGAATGAGCAGCTCAAGGGCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS GCA 90 bp TGTTGGCACAGCTTGTTCTGGGTGCCCTTGAGCTGCTCATTCTCCTaGAGCAGCTGCACACCATGCTTGGACACCTTGTTTAGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: CWHSLFWVPLSCSFS*SSCTPCLDTLFSCR
Trigger: TCTGCAGCTAAACAAGGTGTCCAAGCATGGTGTGCAGCTGCTGCAGGAGAATGAGCAGCTCAAGGGCACCCAGAACAAGCTGTGCCAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS GCA 90 bp TGGAACACCACATCAAAGTCGCCGTCCTCCGCCTCTGTTTGCATGTaGACAATGTCCTGTAGCATGGAGGTCGCCTGGATCAGGACTGTT +
Preference number: 5 (lower is better)
Translates to: WNTTSKSPSSASVCM*TMSCSMEVAWIRTV
Trigger: AACAGTCCTGATCCAGGCGACCTCCATGCTACAGGACATTGTGCACATGCAAACAGAGGCGGAGGACGGCGACTTTGATGTGGTGTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CCA 90 bp GGTCTTGGATCTGTTTGTGGTAGAATTCCTTCAGCTCCTCCACCATaGCCAACTCTGGAGTCTTGGTCCCACTGGCATCCTTCTTGCCCC +
Preference number: 5 (lower is better)
Translates to: GLGSVCGRIPSAPPP*PTLESWSHWHPSCP
Trigger: GGGGCAAGAAGGATGCCAGTGGGACCAAGACTCCAGAGTTGGCCATGGTGGAGGAGCTGAAGGAATTCTACCACAAACAGATCCAAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CCA 90 bp TTCTCCAGGTTGTACACGTATTCCTTGTACTCGCCCTCCTGCCTATaGAGCTGCTCCTCCAGTGCCAAGTACTTCTCCGTGAGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: FSRLYTYSLYSPSCL*SCSSSAKYFSVSSS
Trigger: AGAGGAGCTCACGGAGAAGTACTTGGCACTGGAGGAGCAGCTCCATAGGCAGGAGGGCGAGTACAAGGAATACGTGTACAACCTGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CAA 90 bp CCCAGGCTACTTGCAGATTCAAGGAGGGACTGTGGCCACATCAGTCTGTTTCTGGCCACAATCTCCTTCTaGTTGTTGGCCAGCTGCTCG +
Preference number: 5 (lower is better)
Translates to: PRLLADSRRDCGHISLFLATISF*LLASCS
Trigger: CGAGCAGCTGGCCAACAACAAGAAGGAGATTGTGGC...CAGAAACAGACTGATGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAGCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CAA 90 bp CAGGCTACTTGCAGATTCAAGGAGGGACTGTGGCCACATCAGTCTGTTTCTGCATCCAGGGAACTCAGCTaGATCCCGAGGGCGATGTTC +
Preference number: 5 (lower is better)
Translates to: QATCRFKEGLWPHQSVSASRELS*IPRAMF
Trigger: GAACATCGCCCTCGGGATCAAGCTGAGTTCCCTGGA...TGCAGAAACAGACTGATGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CAA 90 bp CTACTTGCAGATTCAAGGAGGGACTGTGGCCACATCAGTCTGTTTCTGCAGCAGGTCTCCCACATCTGGTaGGTGGCCATCTTTCGGAAC +
Preference number: 5 (lower is better)
Translates to: LLADSRRDCGHISLFLQQVSHIW*VAIFRN
Trigger: GTTCCGAAAGATGGCCACCAACCAGATGTGGGAGAC...CTGCTGCAGAAACAGACTGATGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CAA 90 bp ATAACTTCCCTGGGTTTCCCCAGGCTACTTGCAGATTCAAGGAGGGACTGTGGCCTGCTTCTCCTTCAGTaGCGCTTCCAGCTGGTCTTT +
Preference number: 5 (lower is better)
Translates to: ITSLGFPRLLADSRRDCGLLLLQ*RFQLVF
Trigger: AAAGACCAGCTGGAAGCGCAACTGAAGGAGAAGCAG...GCCACAGTCCCTCCTTGAATCTGCAAGTAGCCTGGGGAAACCCAGGGAAGTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CCA 90 bp AGGCTCTGCAGCTGGTCATTAAGGTCTGTGATCTCATCCACCTTCTaGTTCAGCGTGCGCTTGAGGAAGGCCACAATCTCCTTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: RLCSWSLRSVISSTF*FSVRLRKATISFLL
Trigger: CAACAAGAAGGAGATTGTGGCCTTCCTCAAGCGCACGCTGAACCAGAAGGTGGATGAGATCACAGACCTTAATGACCAGCTGCAGAGCCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CAA 90 bp GGTACCCAATGTTTATATAACTTCCCTGGGTTTCCCCAGGCTACTTGCAGATTCCTGAGATCCTGGGGTTaGAGTGGGATGCGGACCGGA +
Preference number: 5 (lower is better)
Translates to: GTQCLYNFPGFPQATCRFLRSWG*SGMRTG
Trigger: TCCGGTCCGCATCCCACTCAAACCCCAGGATCTCAG...GAATCTGCAAGTAGCCTGGGGAAACCCAGGGAAGTTATATAAACATTGGGTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CAA 90 bp CTACTTGCAGATTCAAGGAGGGACTGTGGCCACATCAGTCTGTTTCTGCAGCAGACAATCTCCTTCTTGTaGTTGGCCAGCTGCTCGAAC +
Preference number: 5 (lower is better)
Translates to: LLADSRRDCGHISLFLQQTISFL*LASCSN
Trigger: GTTCGAGCAGCTGGCCAACAACAAGAAGGAGATTGT...CTGCTGCAGAAACAGACTGATGTGGCCACAGTCCCTCCTTGAATCTGCAAGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CAA 90 bp TGTTTATATAACTTCCCTGGGTTTCCCCAGGCTACTTGCAGATTCAAGGAGGGATGGTTCAGCGTGCGCTaGAGGAAGGCCACAATCTCC +
Preference number: 5 (lower is better)
Translates to: CLYNFPGFPQATCRFKEGWFSVR*RKATIS
Trigger: GGAGATTGTGGCCTTCCTCAAGCGCACGCTGAACCA...TCCCTCCTTGAATCTGCAAGTAGCCTGGGGAAACCCAGGGAAGTTATATAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CAA 90 bp CACAGTGGTACCCAATGTTTATATAACTTCCCTGGGTTTCCCCAGGCTACTTGCTTGCCCTGCATCTCCTaGCCTCCTTTGTTTGGCTTC +
Preference number: 5 (lower is better)
Translates to: HSGTQCLYNFPGFPQATCLPCIS*PPLFGF
Trigger: GAAGCCAAACAAAGGAGGCAAGGAGATGCAGGGCAA...GCAAGTAGCCTGGGGAAACCCAGGGAAGTTATATAAACATTGGGTACCACTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CAA 90 bp ACAGTGGTACCCAATGTTTATATAACTTCCCTGGGTTTCCCCAGGCTACTTGCAAGCTGCACACCATGCTaGGACACCTTGTTTAGCTGC +
Preference number: 5 (lower is better)
Translates to: TVVPNVYITSLGFPRLLASCTPC*DTLFSC
Trigger: GCAGCTAAACAAGGTGTCCAAGCATGGTGTGCAGCT...TGCAAGTAGCCTGGGGAAACCCAGGGAAGTTATATAAACATTGGGTACCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CAA 90 bp AATGTTTATATAACTTCCCTGGGTTTCCCCAGGCTACTTGCAGATTCAAGGAGGCAGCATCTCCAGCTGTaGGCACAGCTTGTTCTGGGT +
Preference number: 5 (lower is better)
Translates to: NVYITSLGFPRLLADSRRQHLQL*AQLVLG
Trigger: ACCCAGAACAAGCTGTGCCAACAGCTGGAGATGCTG...CCTCCTTGAATCTGCAAGTAGCCTGGGGAAACCCAGGGAAGTTATATAAACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CAA 90 bp CAATGTTTATATAACTTCCCTGGGTTTCCCCAGGCTACTTGCAGATTCAAGGAGGTCCTCCGCCTCTGTTaGCATGTGCACAATGTCCTG +
Preference number: 5 (lower is better)
Translates to: QCLYNFPGFPQATCRFKEVLRLC*HVHNVL
Trigger: CAGGACATTGTGCACATGCAAACAGAGGCGGAGGAC...CTCCTTGAATCTGCAAGTAGCCTGGGGAAACCCAGGGAAGTTATATAAACATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CAA 90 bp CCCAATGTTTATATAACTTCCCTGGGTTTCCCCAGGCTACTTGCAGATTCAAGGCCTGTCCTCCAGGTCTaGGATCTGTTTGTGGTAGAA +
Preference number: 5 (lower is better)
Translates to: PNVYITSLGFPRLLADSRPVLQV*DLFVVE
Trigger: TTCTACCACAAACAGATCCAAGACCTGGAGGACAGG...CCTTGAATCTGCAAGTAGCCTGGGGAAACCCAGGGAAGTTATATAAACATTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CAA 90 bp GGTACCCAATGTTTATATAACTTCCCTGGGTTTCCCCAGGCTACTTGCAGATTCGTGGTGAGCTGGTCCTaGATTTCCTGGAATTCATGG +
Preference number: 5 (lower is better)
Translates to: GTQCLYNFPGFPQATCRFVVSWS*ISWNSW
Trigger: CCATGAATTCCAGGAAATCAAGGACCAGCTCACCAC...GAATCTGCAAGTAGCCTGGGGAAACCCAGGGAAGTTATATAAACATTGGGTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS-3UTR CAA 90 bp ACCCAATGTTTATATAACTTCCCTGGGTTTCCCCAGGCTACTTGCAGATTCAAGTTCCTCAGCCTGTCCTaGTCCAGCACAGACTTCTTC +
Preference number: 5 (lower is better)
Translates to: TQCLYNFPGFPQATCRFKFLSLS*SSTDFF
Trigger: GAAGAAGTCTGTGCTGGACAAGGACAGGCTGAGGAA...CTTGAATCTGCAAGTAGCCTGGGGAAACCCAGGGAAGTTATATAAACATTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS GCA 72 bp GGGACAGCAGGAGGCGCAGTTGCTCCGTCTCCTCTGTaGCCTTTCTCTGTTGGCGGCACTTCTCGGTCAGCA +
Preference number: 6 (lower is better)
Translates to: GTAGGAVAPSPL*PFSVGGTSRSA
Trigger: TGCTGACCGAGAAGTGCCGCCAACAGAGAAAGGGCACAGAGGAGACGGAGCAACTGCGCCTCCTGCTGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CCA 72 bp GCGGACCGGACGTCGAGGCACCAGCCCAAGATCCCCTaGCTTATAGGTTGTGATGGTCGAGAGCTGCTGCAG +
Preference number: 6 (lower is better)
Translates to: ADRTSRHQPKIP*LIGCDGRELLQ
Trigger: CTGCAGCAGCTCTCGACCATCACAACCTATAAGCCAGGGGATCTTGGGCTGGTGCCTCGACGTCCGGTCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CCA 72 bp GATATAGGAGAGGGGCCTGAGATCCTGGGGTTTGAGTaGGATGCGGACCGGACGTCGAGGCACCAGCCCAAG +
Preference number: 6 (lower is better)
Translates to: DIGEGPEILGFE*DADRTSRHQPK
Trigger: CTTGGGCTGGTGCCTCGACGTCCGGTCCGCATCCCACTCAAACCCCAGGATCTCAGGCCCCTCTCCTATATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CCA 72 bp GGATGGCCCGCCTGGTCGTCTCCCACATCTGGTTGGTaGCCATCTTTCGGAACTCTGTGGCCACCAGGTTCA +
Preference number: 6 (lower is better)
Translates to: GWPAWSSPTSGW*PSFGTLWPPGS
Trigger: TGAACCTGGTGGCCACAGAGTTCCGAAAGATGGCCACCAACCAGATGTGGGAGACGACCAGGCGGGCCATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CCA 72 bp CTAGGATGGCCCGCCTGGTCGTCTCCCACATCTGGTTaGTGGCCATCTTTCGGAACTCTGTGGCCACCAGGT +
Preference number: 6 (lower is better)
Translates to: LGWPAWSSPTSG*WPSFGTLWPPG
Trigger: ACCTGGTGGCCACAGAGTTCCGAAAGATGGCCACCAACCAGATGTGGGAGACGACCAGGCGGGCCATCCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CAA 72 bp TCTAGGATGGCCCGCCTGGTCGTCTCCCACATCTGGTaGGTGGCCATCTTTCGGAACTCTGTGGCCACCAGG +
Preference number: 6 (lower is better)
Translates to: SRMARLVVSHIW*VAIFRNSVATR
Trigger: CCTGGTGGCCACAGAGTTCCGAAAGATGGCCACCAACCAGATGTGGGAGACGACCAGGCGGGCCATCCTAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CAA 90 bp CGCACCTGGGCCAGTTGGGCCTCGAACGCGTCCTTCTCCATATCCTaGGCCACCTCCAGGCTCTGCAGCTGGTCATTAAGGTCTGTGATC +
Preference number: 6 (lower is better)
Translates to: RTWASWASNASFSIS*ATSRLCSWSLRSVI
Trigger: GATCACAGACCTTAATGACCAGCTGCAGAGCCTGGAGGTGGCCAAGGATATGGAGAAGGACGCGTTCGAGGCCCAACTGGCCCAGGTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CAA 90 bp ACCACCCCTGAGCTGAGCAATACCAGCAGTTGCTGCAGCAGCTCCTaGCGCTGCAGTTGGAACACCACATCAAAGTCGCCGTCCTCCGCC +
Preference number: 6 (lower is better)
Translates to: TTPELSNTSSCCSSS*RCSWNTTSKSPSSA
Trigger: GGCGGAGGACGGCGACTTTGATGTGGTGTTCCAACTGCAGCGCAAGGAGCTGCTGCAGCAACTGCTGGTATTGCTCAGCTCAGGGGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS TCA 72 bp AGCTTCTCCCGCACAGCCAGTTCATCCCATTTCCGCTaGTACCGGGCCAGCCTGTCCTCCAGGTCTTGGATC +
Preference number: 6 (lower is better)
Translates to: SFSRTASSSHFR*YRASLSSRSWI
Trigger: GATCCAAGACCTGGAGGACAGGCTGGCCCGGTATCAGCGGAAATGGGATGAACTGGCTGTGCGGGAGAAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS GCA 72 bp AAGTTCTGCTCCAGTTGGGACAGCAGGAGGCGCAGTTaGTCCGTCTCCTCTGTGCCCTTTCTCTGTTGGCGG +
Preference number: 6 (lower is better)
Translates to: KFCSSWDSRRRS*SVSSVPFLCWR
Trigger: CCGCCAACAGAGAAAGGGCACAGAGGAGACGGAGCAACTGCGCCTCCTGCTGTCCCAACTGGAGCAGAACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CCA 72 bp TTCTCTAGGATGGCCCGCCTGGTCGTCTCCCACATCTaGTTGGTGGCCATCTTTCGGAACTCTGTGGCCACC +
Preference number: 6 (lower is better)
Translates to: FSRMARLVVSHI*LVAIFRNSVAT
Trigger: GGTGGCCACAGAGTTCCGAAAGATGGCCACCAACCAGATGTGGGAGACGACCAGGCGGGCCATCCTAGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CAA 90 bp GAGCTGGTCCTTGATTTCCTGGAATTCATGGCGCACCTGGGCCAGTaGGGCCTCGAACGCGTCCTTCTCCATATCCTTGGCCACCTCCAG +
Preference number: 6 (lower is better)
Translates to: ELVLDFLEFMAHLGQ*GLERVLLHILGHLQ
Trigger: CTGGAGGTGGCCAAGGATATGGAGAAGGACGCGTTCGAGGCCCAACTGGCCCAGGTGCGCCATGAATTCCAGGAAATCAAGGACCAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CAA 90 bp CTCAGCTTGATCCCGAGGGCGATGTTCTCTGTGGTGAGCTGGTCCTaGATTTCCTGGAATTCATGGCGCACCTGGGCCAGTTGGGCCTCG +
Preference number: 6 (lower is better)
Translates to: LSLIPRAMFSVVSWS*ISWNSWRTWASWAS
Trigger: CGAGGCCCAACTGGCCCAGGTGCGCCATGAATTCCAGGAAATCAAGGACCAGCTCACCACAGAGAACATCGCCCTCGGGATCAAGCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CAA 90 bp CTGTTGTTCTCTAGGATGGCCCGCCTGGTCGTCTCCCACATCTGGTaGGTGGCCATCTTTCGGAACTCTGTGGCCACCAGGTTCACACGC +
Preference number: 6 (lower is better)
Translates to: LLFSRMARLVVSHIW*VAIFRNSVATRFTR
Trigger: GCGTGTGAACCTGGTGGCCACAGAGTTCCGAAAGATGGCCACCAACCAGATGTGGGAGACGACCAGGCGGGCCATCCTAGAGAACAACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CAA 90 bp CACATTCTGGAAGTTCTGCTCCAGTTGGGACAGCAGGAGGCGCAGTaGCTCCGTCTCCTCTGTGCCCTTTCTCTGTTGGCGGCACTTCTC +
Preference number: 6 (lower is better)
Translates to: HILEVLLQLGQQEAQ*LRLLCALSLLAALL
Trigger: GAGAAGTGCCGCCAACAGAGAAAGGGCACAGAGGAGACGGAGCAACTGCGCCTCCTGCTGTCCCAACTGGAGCAGAACTTCCAGAATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CAA 90 bp GAAACAGCCCCTTCCTTGGATGTCTGGGTGATGCGTTGGCTTTCTTaGGATAGGCCCTGGGGCTGCTTGTCCTGGTGGGAACCCATGTCC +
Preference number: 6 (lower is better)
Translates to: ETAPSLDVWVMRWLS*DRPWGCLSWWEPMS
Trigger: GGACATGGGTTCCCACCAGGACAAGCAGCCCCAGGGCCTATCCAAAGAAAGCCAACGCATCACCCAGACATCCAAGGAAGGGGCTGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS TCA 72 bp GAGGCACCAGCCCAAGATCCCCTGGCTTATAGGTTGTaGTGGTCGAGAGCTGCTGCAGCAGAGAAACAGCCC +
Preference number: 6 (lower is better)
Translates to: EAPAQDPLAYRL*WSRAAAAEKQP
Trigger: GGGCTGTTTCTCTGCTGCAGCAGCTCTCGACCATCACAACCTATAAGCCAGGGGATCTTGGGCTGGTGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS GCA 72 bp GTACTCGCCCTCCTGCCTATGGAGCTGCTCCTCCAGTaGCAAGTACTTCTCCGTGAGCTCCTCTTTCTGCAG +
Preference number: 6 (lower is better)
Translates to: VLALLPMELLLQ*QVLLRELLFLQ
Trigger: CTGCAGAAAGAGGAGCTCACGGAGAAGTACTTGGCACTGGAGGAGCAGCTCCATAGGCAGGAGGGCGAGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS GCA 72 bp AGGGTCTGGTTGTCCCTCTGCACATTCTGGAAGTTCTaGTCCAGTTGGGACAGCAGGAGGCGCAGTTGCTCC +
Preference number: 6 (lower is better)
Translates to: RVWLSLCTFWKF*SSWDSRRRSCS
Trigger: GGAGCAACTGCGCCTCCTGCTGTCCCAACTGGAGCAGAACTTCCAGAATGTGCAGAGGGACAACCAGACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS GCA 72 bp GTGATGCGTTGGCTTTCTTTGGATAGGCCCTGGGGCTaGTTGTCCTGGTGGGAACCCATGTCCGGCTGTGTT +
Preference number: 6 (lower is better)
Translates to: VMRWLSLDRPWG*LSWWEPMSGCV
Trigger: AACACAGCCGGACATGGGTTCCCACCAGGACAAGCAGCCCCAGGGCCTATCCAAAGAAAGCCAACGCATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CCA 72 bp CCTCCACCATGGCCAACTCTGGAGTCTTGGTCCCACTaGCATCCTTCTTGCCCCCTATCTTCTTGCCCTGCA +
Preference number: 6 (lower is better)
Translates to: PPPWPTLESWSH*HPSCPLSSCPA
Trigger: TGCAGGGCAAGAAGATAGGGGGCAAGAAGGATGCCAGTGGGACCAAGACTCCAGAGTTGGCCATGGTGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CCA 72 bp GCGATGTTCTCTGTGGTGAGCTGGTCCTTGATTTCCTaGAATTCATGGCGCACCTGGGCCAGTTGGGCCTCG +
Preference number: 6 (lower is better)
Translates to: AMFSVVSWSLIS*NSWRTWASWAS
Trigger: CGAGGCCCAACTGGCCCAGGTGCGCCATGAATTCCAGGAAATCAAGGACCAGCTCACCACAGAGAACATCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CAA 90 bp CAGCAGGAGGCGCAGTTGCTCCGTCTCCTCTGTGCCCTTTCTCTGTaGGCGGCACTTCTCGGTCAGCATGAGGATAATCTTCTTATGCCC +
Preference number: 6 (lower is better)
Translates to: QQEAQLLRLLCALSL*AALLGQHEDNLLMP
Trigger: GGGCATAAGAAGATTATCCTCATGCTGACCGAGAAGTGCCGCCAACAGAGAAAGGGCACAGAGGAGACGGAGCAACTGCGCCTCCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS TCA 72 bp GCAGCAGAGAAACAGCCCCTTCCTTGGATGTCTGGGTaGTGCGTTGGCTTTCTTTGGATAGGCCCTGGGGCT +
Preference number: 6 (lower is better)
Translates to: AAEKQPLPWMSG*CVGFLWIGPGA
Trigger: AGCCCCAGGGCCTATCCAAAGAAAGCCAACGCATCACCCAGACATCCAAGGAAGGGGCTGTTTCTCTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS GCA 72 bp CCAACTCTGGAGTCTTGGTCCCACTGGCATCCTTCTTaGCCCCTATCTTCTTGCCCTGCATCTCCTTGCCTC +
Preference number: 6 (lower is better)
Translates to: PTLESWSHWHPS*PLSSCPASPCL
Trigger: GAGGCAAGGAGATGCAGGGCAAGAAGATAGGGGGCAAGAAGGATGCCAGTGGGACCAAGACTCCAGAGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS GCA 72 bp ACGTATTCCTTGTACTCGCCCTCCTGCCTATGGAGCTaGTCCTCCAGTGCCAAGTACTTCTCCGTGAGCTCC +
Preference number: 6 (lower is better)
Translates to: TYSLYSPSCLWS*SSSAKYFSVSS
Trigger: GGAGCTCACGGAGAAGTACTTGGCACTGGAGGAGCAGCTCCATAGGCAGGAGGGCGAGTACAAGGAATACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS GCA 72 bp AGCTGTTGGCACAGCTTGTTCTGGGTGCCCTTGAGCTaGTCATTCTCCTGCAGCAGCTGCACACCATGCTTG +
Preference number: 6 (lower is better)
Translates to: SCWHSLFWVPLS*SFSCSSCTPCL
Trigger: CAAGCATGGTGTGCAGCTGCTGCAGGAGAATGAGCAGCTCAAGGGCACCCAGAACAAGCTGTGCCAACAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS GCA 72 bp AGCAATACCAGCAGTTGCTGCAGCAGCTCCTTGCGCTaGAGTTGGAACACCACATCAAAGTCGCCGTCCTCC +
Preference number: 6 (lower is better)
Translates to: SNTSSCCSSSLR*SWNTTSKSPSS
Trigger: GGAGGACGGCGACTTTGATGTGGTGTTCCAACTGCAGCGCAAGGAGCTGCTGCAGCAACTGCTGGTATTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CCA 72 bp GTAGAATTCCTTCAGCTCCTCCACCATGGCCAACTCTaGAGTCTTGGTCCCACTGGCATCCTTCTTGCCCCC +
Preference number: 6 (lower is better)
Translates to: VEFLQLLHHGQL*SLGPTGILLAP
Trigger: GGGGGCAAGAAGGATGCCAGTGGGACCAAGACTCCAGAGTTGGCCATGGTGGAGGAGCTGAAGGAATTCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CCA 72 bp TTGATTTCCTGGAATTCATGGCGCACCTGGGCCAGTTaGGCCTCGAACGCGTCCTTCTCCATATCCTTGGCC +
Preference number: 6 (lower is better)
Translates to: LISWNSWRTWAS*ASNASFSISLA
Trigger: GGCCAAGGATATGGAGAAGGACGCGTTCGAGGCCCAACTGGCCCAGGTGCGCCATGAATTCCAGGAAATCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CCA 72 bp AGCTGGTCCTTGATTTCCTGGAATTCATGGCGCACCTaGGCCAGTTGGGCCTCGAACGCGTCCTTCTCCATA +
Preference number: 6 (lower is better)
Translates to: SWSLISWNSWRT*ASWASNASFSI
Trigger: TATGGAGAAGGACGCGTTCGAGGCCCAACTGGCCCAGGTGCGCCATGAATTCCAGGAAATCAAGGACCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CCA 72 bp TGTTTAGCTGCAGAGTCACGCTGTTGTTCTCTAGGATaGCCCGCCTGGTCGTCTCCCACATCTGGTTGGTGG +
Preference number: 6 (lower is better)
Translates to: CLAAESRCCSLG*PAWSSPTSGWW
Trigger: CCACCAACCAGATGTGGGAGACGACCAGGCGGGCCATCCTAGAGAACAACAGCGTGACTCTGCAGCTAAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CCA 72 bp TTCTCCAGCATCTCCAGCTGTTGGCACAGCTTGTTCTaGGTGCCCTTGAGCTGCTCATTCTCCTGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: FSSISSCWHSLF*VPLSCSFSCSS
Trigger: GCTGCTGCAGGAGAATGAGCAGCTCAAGGGCACCCAGAACAAGCTGTGCCAACAGCTGGAGATGCTGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CCA 72 bp TTGTCCCTCTGCACATTCTGGAAGTTCTGCTCCAGTTaGGACAGCAGGAGGCGCAGTTGCTCCGTCTCCTCT +
Preference number: 6 (lower is better)
Translates to: LSLCTFWKFCSS*DSRRRSCSVSS
Trigger: AGAGGAGACGGAGCAACTGCGCCTCCTGCTGTCCCAACTGGAGCAGAACTTCCAGAATGTGCAGAGGGACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CCA 72 bp GAAACAGCCCCTTCCTTGGATGTCTGGGTGATGCGTTaGCTTTCTTTGGATAGGCCCTGGGGCTGCTTGTCC +
Preference number: 6 (lower is better)
Translates to: ETAPSLDVWVMR*LSLDRPWGCLS
Trigger: GGACAAGCAGCCCCAGGGCCTATCCAAAGAAAGCCAACGCATCACCCAGACATCCAAGGAAGGGGCTGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CAA 72 bp GCCAACTCTGGAGTCTTGGTCCCACTGGCATCCTTCTaGCCCCCTATCTTCTTGCCCTGCATCTCCTTGCCT +
Preference number: 6 (lower is better)
Translates to: ANSGVLVPLASF*PPIFLPCISLP
Trigger: AGGCAAGGAGATGCAGGGCAAGAAGATAGGGGGCAAGAAGGATGCCAGTGGGACCAAGACTCCAGAGTTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CAA 72 bp CTTGATTTCCTGGAATTCATGGCGCACCTGGGCCAGTaGGGCCTCGAACGCGTCCTTCTCCATATCCTTGGC +
Preference number: 6 (lower is better)
Translates to: LDFLEFMAHLGQ*GLERVLLHILG
Trigger: GCCAAGGATATGGAGAAGGACGCGTTCGAGGCCCAACTGGCCCAGGTGCGCCATGAATTCCAGGAAATCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CAA 72 bp ATCCCGAGGGCGATGTTCTCTGTGGTGAGCTGGTCCTaGATTTCCTGGAATTCATGGCGCACCTGGGCCAGT +
Preference number: 6 (lower is better)
Translates to: IPRAMFSVVSWS*ISWNSWRTWAS
Trigger: ACTGGCCCAGGTGCGCCATGAATTCCAGGAAATCAAGGACCAGCTCACCACAGAGAACATCGCCCTCGGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CAA 72 bp TGCTTGGACACCTTGTTTAGCTGCAGAGTCACGCTGTaGTTCTCTAGGATGGCCCGCCTGGTCGTCTCCCAC +
Preference number: 6 (lower is better)
Translates to: CLDTLFSCRVTL*FSRMARLVVSH
Trigger: GTGGGAGACGACCAGGCGGGCCATCCTAGAGAACAACAGCGTGACTCTGCAGCTAAACAAGGTGTCCAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CAA 72 bp GAGCTGAGCAATACCAGCAGTTGCTGCAGCAGCTCCTaGCGCTGCAGTTGGAACACCACATCAAAGTCGCCG +
Preference number: 6 (lower is better)
Translates to: ELSNTSSCCSSS*RCSWNTTSKSP
Trigger: CGGCGACTTTGATGTGGTGTTCCAACTGCAGCGCAAGGAGCTGCTGCAGCAACTGCTGGTATTGCTCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CAA 72 bp ATGCGTTGGCTTTCTTTGGATAGGCCCTGGGGCTGCTaGTCCTGGTGGGAACCCATGTCCGGCTGTGTTTTC +
Preference number: 6 (lower is better)
Translates to: MRWLSLDRPWGC*SWWEPMSGCVF
Trigger: GAAAACACAGCCGGACATGGGTTCCCACCAGGACAAGCAGCCCCAGGGCCTATCCAAAGAAAGCCAACGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CAA 72 bp CCTTCCTTGGATGTCTGGGTGATGCGTTGGCTTTCTTaGGATAGGCCCTGGGGCTGCTTGTCCTGGTGGGAA +
Preference number: 6 (lower is better)
Translates to: PSLDVWVMRWLS*DRPWGCLSWWE
Trigger: TTCCCACCAGGACAAGCAGCCCCAGGGCCTATCCAAAGAAAGCCAACGCATCACCCAGACATCCAAGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CAA 90 bp ATGATCTCTTGGGTGTTCTCCAGCATCTCCAGCTGTTGGCACAGCTaGTTCTGGGTGCCCTTGAGCTGCTCATTCTCCTGCAGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: MISWVFSSISSCWHS*FWVPLSCSFSCSSC
Trigger: GCAGCTGCTGCAGGAGAATGAGCAGCTCAAGGGCACCCAGAACAAGCTGTGCCAACAGCTGGAGATGCTGGAGAACACCCAAGAGATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS GCA 72 bp TGGGTGCCCTTGAGCTGCTCATTCTCCTGCAGCAGCTaGACACCATGCTTGGACACCTTGTTTAGCTGCAGA +
Preference number: 6 (lower is better)
Translates to: WVPLSCSFSCSS*TPCLDTLFSCR
Trigger: TCTGCAGCTAAACAAGGTGTCCAAGCATGGTGTGCAGCTGCTGCAGGAGAATGAGCAGCTCAAGGGCACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS GCA 72 bp TTGGTCAGCTCCTCCTGTAGCCGATTTGCCTCTGCCTaGTTCTCCTTCAGTTGCGCTTCCAGCTGGTCTTTC +
Preference number: 6 (lower is better)
Translates to: LVSSSCSRFASA*FSFSCASSWSF
Trigger: GAAAGACCAGCTGGAAGCGCAACTGAAGGAGAAGCAGGCAGAGGCAAATCGGCTACAGGAGGAGCTGACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS GCA 72 bp ACATCAAAGTCGCCGTCCTCCGCCTCTGTTTGCATGTaGACAATGTCCTGTAGCATGGAGGTCGCCTGGATC +
Preference number: 6 (lower is better)
Translates to: TSKSPSSASVCM*TMSCSMEVAWI
Trigger: GATCCAGGCGACCTCCATGCTACAGGACATTGTGCACATGCAAACAGAGGCGGAGGACGGCGACTTTGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS GCA 72 bp AAAACCACCCCTGAGCTGAGCAATACCAGCAGTTGCTaGAGCAGCTCCTTGCGCTGCAGTTGGAACACCACA +
Preference number: 6 (lower is better)
Translates to: KTTPELSNTSSC*SSSLRCSWNTT
Trigger: TGTGGTGTTCCAACTGCAGCGCAAGGAGCTGCTGCAGCAACTGCTGGTATTGCTCAGCTCAGGGGTGGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS GCA 72 bp TTCAAAACCACCCCTGAGCTGAGCAATACCAGCAGTTaGTGCAGCAGCTCCTTGCGCTGCAGTTGGAACACC +
Preference number: 6 (lower is better)
Translates to: FKTTPELSNTSS*CSSSLRCSWNT
Trigger: GGTGTTCCAACTGCAGCGCAAGGAGCTGCTGCAGCAACTGCTGGTATTGCTCAGCTCAGGGGTGGTTTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CCA 72 bp TGCGCTTCCAGCTGGTCTTTCTCACTCCTCAGGGTCTaGTTGTCCCTCTGCACATTCTGGAAGTTCTGCTCC +
Preference number: 6 (lower is better)
Translates to: CASSWSFSLLRV*LSLCTFWKFCS
Trigger: GGAGCAGAACTTCCAGAATGTGCAGAGGGACAACCAGACCCTGAGGAGTGAGAAAGACCAGCTGGAAGCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CCA 72 bp TGCTGCAGCAGAGAAACAGCCCCTTCCTTGGATGTCTaGGTGATGCGTTGGCTTTCTTTGGATAGGCCCTGG +
Preference number: 6 (lower is better)
Translates to: CCSRETAPSLDV*VMRWLSLDRPW
Trigger: CCAGGGCCTATCCAAAGAAAGCCAACGCATCACCCAGACATCCAAGGAAGGGGCTGTTTCTCTGCTGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CAA 72 bp GCGCAGTTGCTCCGTCTCCTCTGTGCCCTTTCTCTGTaGGCGGCACTTCTCGGTCAGCATGAGGATAATCTT +
Preference number: 6 (lower is better)
Translates to: AQLLRLLCALSL*AALLGQHEDNL
Trigger: AAGATTATCCTCATGCTGACCGAGAAGTGCCGCCAACAGAGAAAGGGCACAGAGGAGACGGAGCAACTGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CAA 90 bp TCCACCATGGCCAACTCTGGAGTCTTGGTCCCACTGGCATCCTTCTaGCCCCCTATCTTCTTGCCCTGCATCTCCTTGCCTCCTTTGTTT +
Preference number: 6 (lower is better)
Translates to: STMANSGVLVPLASF*PPIFLPCISLPPLF
Trigger: AAACAAAGGAGGCAAGGAGATGCAGGGCAAGAAGATAGGGGGCAAGAAGGATGCCAGTGGGACCAAGACTCCAGAGTTGGCCATGGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CAA 90 bp TTCATCCCATTTCCGCTGATACCGGGCCAGCCTGTCCTCCAGGTCTaGGATCTGTTTGTGGTAGAATTCCTTCAGCTCCTCCACCATGGC +
Preference number: 6 (lower is better)
Translates to: FIPFPLIPGQPVLQV*DLFVVEFLQLLHHG
Trigger: GCCATGGTGGAGGAGCTGAAGGAATTCTACCACAAACAGATCCAAGACCTGGAGGACAGGCTGGCCCGGTATCAGCGGAAATGGGATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CAA 90 bp TCCTTGTCCAGCACAGACTTCTTCTCCAGGTTGTACACGTATTCCTaGTACTCGCCCTCCTGCCTATGGAGCTGCTCCTCCAGTGCCAAG +
Preference number: 6 (lower is better)
Translates to: SLSSTDFFSRLYTYS*YSPSCLWSCSSSAK
Trigger: CTTGGCACTGGAGGAGCAGCTCCATAGGCAGGAGGGCGAGTACAAGGAATACGTGTACAACCTGGAGAAGAAGTCTGTGCTGGACAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CAA 90 bp GTGCCCTTGAGCTGCTCATTCTCCTGCAGCAGCTGCACACCATGCTaGGACACCTTGTTTAGCTGCAGAGTCACGCTGTTGTTCTCTAGG +
Preference number: 6 (lower is better)
Translates to: VPLSCSFSCSSCTPC*DTLFSCRVTLLFSR
Trigger: CCTAGAGAACAACAGCGTGACTCTGCAGCTAAACAAGGTGTCCAAGCATGGTGTGCAGCTGCTGCAGGAGAATGAGCAGCTCAAGGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CAA 90 bp TTCAGTTGCGCTTCCAGCTGGTCTTTCTCACTCCTCAGGGTCTGGTaGTCCCTCTGCACATTCTGGAAGTTCTGCTCCAGTTGGGACAGC +
Preference number: 6 (lower is better)
Translates to: FSCASSWSFSLLRVW*SLCTFWKFCSSWDS
Trigger: GCTGTCCCAACTGGAGCAGAACTTCCAGAATGTGCAGAGGGACAACCAGACCCTGAGGAGTGAGAAAGACCAGCTGGAAGCGCAACTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS GCA 72 bp AGCTTGTTCTGGGTGCCCTTGAGCTGCTCATTCTCCTaGAGCAGCTGCACACCATGCTTGGACACCTTGTTT +
Preference number: 6 (lower is better)
Translates to: SLFWVPLSCSFS*SSCTPCLDTLF
Trigger: AAACAAGGTGTCCAAGCATGGTGTGCAGCTGCTGCAGGAGAATGAGCAGCTCAAGGGCACCCAGAACAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CAA 72 bp AGCACAGACTTCTTCTCCAGGTTGTACACGTATTCCTaGTACTCGCCCTCCTGCCTATGGAGCTGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: STDFFSRLYTYS*YSPSCLWSCSS
Trigger: GGAGGAGCAGCTCCATAGGCAGGAGGGCGAGTACAAGGAATACGTGTACAACCTGGAGAAGAAGTCTGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CAA 72 bp AGCTGCTCATTCTCCTGCAGCAGCTGCACACCATGCTaGGACACCTTGTTTAGCTGCAGAGTCACGCTGTTG +
Preference number: 6 (lower is better)
Translates to: SCSFSCSSCTPC*DTLFSCRVTLL
Trigger: CAACAGCGTGACTCTGCAGCTAAACAAGGTGTCCAAGCATGGTGTGCAGCTGCTGCAGGAGAATGAGCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CAA 72 bp GTCGAGAGCTGCTGCAGCAGAGAAACAGCCCCTTCCTaGGATGTCTGGGTGATGCGTTGGCTTTCTTTGGAT +
Preference number: 6 (lower is better)
Translates to: VESCCSRETAPS*DVWVMRWLSLD
Trigger: ATCCAAAGAAAGCCAACGCATCACCCAGACATCCAAGGAAGGGGCTGTTTCTCTGCTGCAGCAGCTCTCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CAA 90 bp TTGCCCGAATTTTCTGTTCCTTGGTCAGCTCCTCCTGTAGCCGATTaGCCTCTGCCTGCTTCTCCTTCAGTTGCGCTTCCAGCTGGTCTT +
Preference number: 6 (lower is better)
Translates to: LPEFSVPWSAPPVAD*PLPASPSVALPAGL
Trigger: AAGACCAGCTGGAAGCGCAACTGAAGGAGAAGCAGGCAGAGGCAAATCGGCTACAGGAGGAGCTGACCAAGGAACAGAAAATTCGGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CCA 72 bp AGCTGGTCATTAAGGTCTGTGATCTCATCCACCTTCTaGTTCAGCGTGCGCTTGAGGAAGGCCACAATCTCC +
Preference number: 6 (lower is better)
Translates to: SWSLRSVISSTF*FSVRLRKATIS
Trigger: GGAGATTGTGGCCTTCCTCAAGCGCACGCTGAACCAGAAGGTGGATGAGATCACAGACCTTAATGACCAGCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CCA 72 bp ATCTTTCGGAACTCTGTGGCCACCAGGTTCACACGCTaGATAATCTCTTTCCTCAGCCTGTCCTTGTCCAGC +
Preference number: 6 (lower is better)
Translates to: IFRNSVATRFTR*IISFLSLSLSS
Trigger: GCTGGACAAGGACAGGCTGAGGAAAGAGATTATCCAGCGTGTGAACCTGGTGGCCACAGAGTTCCGAAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CAA 72 bp AGCCTGTCCTTGTCCAGCACAGACTTCTTCTCCAGGTaGTACACGTATTCCTTGTACTCGCCCTCCTGCCTA +
Preference number: 6 (lower is better)
Translates to: SLSLSSTDFFSR*YTYSLYSPSCL
Trigger: TAGGCAGGAGGGCGAGTACAAGGAATACGTGTACAACCTGGAGAAGAAGTCTGTGCTGGACAAGGACAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CAA 72 bp TTCTCCTGCAGCAGCTGCACACCATGCTTGGACACCTaGTTTAGCTGCAGAGTCACGCTGTTGTTCTCTAGG +
Preference number: 6 (lower is better)
Translates to: FSCSSCTPCLDT*FSCRVTLLFSR
Trigger: CCTAGAGAACAACAGCGTGACTCTGCAGCTAAACAAGGTGTCCAAGCATGGTGTGCAGCTGCTGCAGGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CAA 90 bp TCATTAAGGTCTGTGATCTCATCCACCTTCTGGTTCAGCGTGCGCTaGAGGAAGGCCACAATCTCCTTCTTGTTGTTGGCCAGCTGCTCG +
Preference number: 6 (lower is better)
Translates to: SLRSVISSTFWFSVR*RKATISFLLLASCS
Trigger: CGAGCAGCTGGCCAACAACAAGAAGGAGATTGTGGCCTTCCTCAAGCGCACGCTGAACCAGAAGGTGGATGAGATCACAGACCTTAATGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS GCA 72 bp CATGGAGGTCGCCTGGATCAGGACTGTTTTAAGGTTTaGCCGAATTTTCTGTTCCTTGGTCAGCTCCTCCTG +
Preference number: 6 (lower is better)
Translates to: HGGRLDQDCFKV*PNFLFLGQLLL
Trigger: CAGGAGGAGCTGACCAAGGAACAGAAAATTCGGGCAAACCTTAAAACAGTCCTGATCCAGGCGACCTCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CCA 72 bp TTCTTATGCCCTATGTTCTTTCTGGCCATGATCTCTTaGGTGTTCTCCAGCATCTCCAGCTGTTGGCACAGC +
Preference number: 6 (lower is better)
Translates to: FLCPMFFLAMIS*VFSSISSCWHS
Trigger: GCTGTGCCAACAGCTGGAGATGCTGGAGAACACCCAAGAGATCATGGCCAGAAAGAACATAGGGCATAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2
CDS CAA 72 bp CTTCTTATGCCCTATGTTCTTTCTGGCCATGATCTCTaGGGTGTTCTCCAGCATCTCCAGCTGTTGGCACAG +
Preference number: 6 (lower is better)
Translates to: LLMPYVLSGHDL*GVLQHLQLLAQ
Trigger: CTGTGCCAACAGCTGGAGATGCTGGAGAACACCCAAGAGATCATGGCCAGAAAGAACATAGGGCATAAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102813.2