Pregenerated sensors for CFAP126 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026649Ensembl transcript IDs: ENSMUST00000027959.11, ENSMUST00000124157.3, ENSMUST00000127394.8, ENSMUST00000129651.8, ENSMUST00000143623.8, ENSMUST00000151340.8, ENSMUST00000156789.8
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTGAGGTTGTCGGCAGCAGGTCTTCACGGCTGGTAGTGTCTGCTTaGCAGGGCTGTCTGGCTTCACGGCCACTCTTGTCTTGCCAATGC | + |
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Preference number: 1 (lower is better) Translates to: GEVVGSRSSRLVVSA*QGCLASRPLLSCQC Trigger: GCATTGGCAAGACAAGAGTGGCCGTGAAGCCAGACAGCCCTGCCAAGCAGACACTACCAGCCGTGAAGACCTGCTGCCGACAACCTCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143623.8 |
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| 3UTR CCA 90 bp | GGTGCTCTTACAAGGGCTCGGAGGTGGGTTGTTGGGAGAGTTGACTaGAGTTTGGGGACCTGGAGTGTGACCTGCAGAGGGGTGCGAGCT | + |
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Preference number: 1 (lower is better) Translates to: GALTRARRWVVGRVD*SLGTWSVTCRGVRA Trigger: AGCTCGCACCCCTCTGCAGGTCACACTCCAGGTCCCCAAACTCCAGTCAACTCTCCCAACAACCCACCTCCGAGCCCTTGTAAGAGCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143623.8 |
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| 3UTR GCA 90 bp | GTTGTTGGGAGAGTTGACTGGAGTTTGGGGACCTGGAGTGTGACCTaGAGAGGGGTGCGAGCTTTGCGGTTCATCTGGGTTGTCTCCTTG | + |
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Preference number: 1 (lower is better) Translates to: VVGRVDWSLGTWSVT*RGVRALRFIWVVSL Trigger: CAAGGAGACAACCCAGATGAACCGCAAAGCTCGCACCCCTCTGCAGGTCACACTCCAGGTCCCCAAACTCCAGTCAACTCTCCCAACAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143623.8 |
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| 3UTR CCA 90 bp | ACCTGGAGTGTGACCTGCAGAGGGGTGCGAGCTTTGCGGTTCATCTaGGTTGTCTCCTTGGATAACCGGGGAGCTGGGAATTATGGTTGG | + |
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Preference number: 1 (lower is better) Translates to: TWSVTCRGVRALRFI*VVSLDNRGAGNYGW Trigger: CCAACCATAATTCCCAGCTCCCCGGTTATCCAAGGAGACAACCCAGATGAACCGCAAAGCTCGCACCCCTCTGCAGGTCACACTCCAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143623.8 |
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| 3UTR CCA 90 bp | CCTGCAGAGGGGTGCGAGCTTTGCGGTTCATCTGGGTTGTCTCCTTaGATAACCGGGGAGCTGGGAATTATGGTTGGATTTGGTGCTTGT | + |
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Preference number: 1 (lower is better) Translates to: PAEGCELCGSSGLSP*ITGELGIMVGFGAC Trigger: ACAAGCACCAAATCCAACCATAATTCCCAGCTCCCCGGTTATCCAAGGAGACAACCCAGATGAACCGCAAAGCTCGCACCCCTCTGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143623.8 |
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| 3UTR TCA 90 bp | AATCTGCCTTCACTCCTGGCCCACCATTTCTCTGTTCCACATTTCTaGATACAGGCAGGGTCTCACCTATTTCGGTCAGTCTCTAAAATG | + |
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Preference number: 1 (lower is better) Translates to: NLPSLLAHHFSVPHF*IQAGSHLFRSVSKM Trigger: CATTTTAGAGACTGACCGAAATAGGTGAGACCCTGCCTGTATTCAGAAATGTGGAACAGAGAAATGGTGGGCCAGGAGTGAAGGCAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027959.11 ENSMUST00000143623.8 |
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| 3UTR GCA 90 bp | GTCTCCTTGGATAACCGGGGAGCTGGGAATTATGGTTGGATTTGGTaGTTGTTGTACAGTCTTGGTGACAGATTTCTTCTGTTTCGTCTG | + |
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Preference number: 1 (lower is better) Translates to: VSLDNRGAGNYGWIW*LLYSLGDRFLLFRL Trigger: CAGACGAAACAGAAGAAATCTGTCACCAAGACTGTACAACAAGCACCAAATCCAACCATAATTCCCAGCTCCCCGGTTATCCAAGGAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143623.8 |
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| 3UTR CCA 90 bp | ATCTGGGTTGTCTCCTTGGATAACCGGGGAGCTGGGAATTATGGTTaGATTTGGTGCTTGTTGTACAGTCTTGGTGACAGATTTCTTCTG | + |
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Preference number: 1 (lower is better) Translates to: IWVVSLDNRGAGNYG*IWCLLYSLGDRFLL Trigger: CAGAAGAAATCTGTCACCAAGACTGTACAACAAGCACCAAATCCAACCATAATTCCCAGCTCCCCGGTTATCCAAGGAGACAACCCAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143623.8 |
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| 3UTR CCA 90 bp | GTTGTCTCCTTGGATAACCGGGGAGCTGGGAATTATGGTTGGATTTaGTGCTTGTTGTACAGTCTTGGTGACAGATTTCTTCTGTTTCGT | + |
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Preference number: 1 (lower is better) Translates to: VVSLDNRGAGNYGWI*CLLYSLGDRFLLFR Trigger: ACGAAACAGAAGAAATCTGTCACCAAGACTGTACAACAAGCACCAAATCCAACCATAATTCCCAGCTCCCCGGTTATCCAAGGAGACAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143623.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGCAGAGGGGTGCGAGCTTTGCGGTTCATCTGGGTTGTCTCCTTGGATAACCCTGGTAGTGTCTGCTTaGCAGGGCTGTCTGGCTTCA | + |
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Preference number: 2 (lower is better) Translates to: PAEGCELCGSSGLSPWITLVVSA*QGCLAS Trigger: TGAAGCCAGACAGCCCTGCCAAGCAGACACTACCAG...GGTTATCCAAGGAGACAACCCAGATGAACCGCAAAGCTCGCACCCCTCTGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143623.8 |
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| 3UTR CAA 90 bp | ACCTGCAGAGGGGTGCGAGCTTTGCGGTTCATCTGGGTTGTCTCCTaGGATAACCGGGGAGCTGGGAATTATGGTTGGATTTGGTGCTTG | + |
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Preference number: 2 (lower is better) Translates to: TCRGVRALRFIWVVS*DNRGAGNYGWIWCL Trigger: CAAGCACCAAATCCAACCATAATTCCCAGCTCCCCGGTTATCCAAGGAGACAACCCAGATGAACCGCAAAGCTCGCACCCCTCTGCAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143623.8 |
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| 3UTR-3UTR TCA 90 bp | GGGGTGCGAGCTTTGCGGTTCATCTGGGTTGTCTCCTTGGATAACCGGGGAGCTGCCCATTACAGGCGTTaGGTAGATCAGGATTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: GVRALRFIWVVSLDNRGAAHYRR*VDQDSC Trigger: ACAAGAATCCTGATCTACTCAACGCCTGTAATGGGC...AGCTCCCCGGTTATCCAAGGAGACAACCCAGATGAACCGCAAAGCTCGCACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143623.8 |
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| 3UTR-3UTR TCA 90 bp | GTTTATTTCCCTAAATCTGCCTTCACTCCTGGCCCACCATTTCTCTGTTCCACATGGGGACCTGGAGTGTaGCCTGCAGAGGGGTGCGAG | + |
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Preference number: 2 (lower is better) Translates to: VYFPKSAFTPGPPFLCSTWGPGV*PAEGCE Trigger: CTCGCACCCCTCTGCAGGTCACACTCCAGGTCCCCA...TGTGGAACAGAGAAATGGTGGGCCAGGAGTGAAGGCAGATTTAGGGAAATAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143623.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGCAGAGGGGTGCGAGCTTTGCGGTTCATCTGGGTTGTCTCCTTGGATAACCTCTGTTCCACATTTCTaGATACAGGCAGGGTCTCAC | + |
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Preference number: 2 (lower is better) Translates to: PAEGCELCGSSGLSPWITSVPHF*IQAGSH Trigger: GTGAGACCCTGCCTGTATTCAGAAATGTGGAACAGA...GGTTATCCAAGGAGACAACCCAGATGAACCGCAAAGCTCGCACCCCTCTGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143623.8 |
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| 3UTR-3UTR CCA 90 bp | CTTACAAGGGCTCGGAGGTGGGTTGTTGGGAGAGTTGACTGGAGTTTGGGGACCGGGAGCTGGGAATTATaGTTGGATTTGGTGCTTGTT | + |
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Preference number: 2 (lower is better) Translates to: LTRARRWVVGRVDWSLGTGSWEL*LDLVLV Trigger: AACAAGCACCAAATCCAACCATAATTCCCAGCTCCC...GGTCCCCAAACTCCAGTCAACTCTCCCAACAACCCACCTCCGAGCCCTTGTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143623.8 |
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| 3UTR CAA 90 bp | ATTTCAGGACGCAGCCCATTACAGGCGTTGAGTAGATCAGGATTCTaGTGTATCCATTTGGTGAGGTTGTCGGCAGCAGGTCTTCACGGC | + |
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Preference number: 2 (lower is better) Translates to: ISGRSPLQALSRSGF*CIHLVRLSAAGLHG Trigger: GCCGTGAAGACCTGCTGCCGACAACCTCACCAAATGGATACACAAGAATCCTGATCTACTCAACGCCTGTAATGGGCTGCGTCCTGAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143623.8 |
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| 3UTR-3UTR CCA 90 bp | ATGTTTATTTCCCTAAATCTGCCTTCACTCCTGGCCCACCATTTCTCTGTTCCATGGAGTTTGGGGACCTaGAGTGTGACCTGCAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: MFISLNLPSLLAHHFSVPWSLGT*SVTCRG Trigger: CCCTCTGCAGGTCACACTCCAGGTCCCCAAACTCCA...TGGAACAGAGAAATGGTGGGCCAGGAGTGAAGGCAGATTTAGGGAAATAAACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143623.8 |
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| 3UTR-3UTR TCA 90 bp | GGGAATTATGGTTGGATTTGGTGCTTGTTGTACAGTCTTGGTGACAGATTTCTTATCGAAGGGCTTGCCTaGGATTTCAGGACGCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: GNYGWIWCLLYSLGDRFLIEGLA*DFRTQP Trigger: GGGCTGCGTCCTGAAATCTCAGGCAAGCCCTTCGAT...AAGAAATCTGTCACCAAGACTGTACAACAAGCACCAAATCCAACCATAATTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143623.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTTCCACATTTCTGAATACAGGCAGGGTCTCACCTATTTCGGTCAGTCTCTAAATGTCACCCCAGCATaGCATAGATCTGGACCTCAG | + |
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Preference number: 2 (lower is better) Translates to: LFHISEYRQGLTYFGQSLNVTPA*HRSGPQ Trigger: CTGAGGTCCAGATCTATGCCATGCTGGGGTGACATT...TAGAGACTGACCGAAATAGGTGAGACCCTGCCTGTATTCAGAAATGTGGAACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027959.11 ENSMUST00000143623.8 |
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| 3UTR-3UTR CCA 90 bp | ACCATTTCTCTGTTCCACATTTCTGAATACAGGCAGGGTCTCACCTATTTCGGTAATGTCACCCCAGCATaGCATAGATCTGGACCTCAG | + |
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Preference number: 2 (lower is better) Translates to: TISLFHISEYRQGLTYFGNVTPA*HRSGPQ Trigger: CTGAGGTCCAGATCTATGCCATGCTGGGGTGACATT...ACCGAAATAGGTGAGACCCTGCCTGTATTCAGAAATGTGGAACAGAGAAATGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027959.11 ENSMUST00000143623.8 |
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| 3UTR CAA 90 bp | TTGGATAACCGGGGAGCTGGGAATTATGGTTGGATTTGGTGCTTGTaGTACAGTCTTGGTGACAGATTTCTTCTGTTTCGTCTGACTGTC | + |
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Preference number: 2 (lower is better) Translates to: LDNRGAGNYGWIWCL*YSLGDRFLLFRLTV Trigger: GACAGTCAGACGAAACAGAAGAAATCTGTCACCAAGACTGTACAACAAGCACCAAATCCAACCATAATTCCCAGCTCCCCGGTTATCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143623.8 |
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| 3UTR CAA 90 bp | TCCTTGGATAACCGGGGAGCTGGGAATTATGGTTGGATTTGGTGCTaGTTGTACAGTCTTGGTGACAGATTTCTTCTGTTTCGTCTGACT | + |
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Preference number: 2 (lower is better) Translates to: SLDNRGAGNYGWIWC*LYSLGDRFLLFRLT Trigger: AGTCAGACGAAACAGAAGAAATCTGTCACCAAGACTGTACAACAAGCACCAAATCCAACCATAATTCCCAGCTCCCCGGTTATCCAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143623.8 |
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| 3UTR CCA 72 bp | GTCGGCAGCAGGTCTTCACGGCTGGTAGTGTCTGCTTaGCAGGGCTGTCTGGCTTCACGGCCACTCTTGTCT | + |
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Preference number: 3 (lower is better) Translates to: VGSRSSRLVVSA*QGCLASRPLLS Trigger: AGACAAGAGTGGCCGTGAAGCCAGACAGCCCTGCCAAGCAGACACTACCAGCCGTGAAGACCTGCTGCCGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143623.8 |
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| 3UTR CCA 72 bp | ACAAGGGCTCGGAGGTGGGTTGTTGGGAGAGTTGACTaGAGTTTGGGGACCTGGAGTGTGACCTGCAGAGGG | + |
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Preference number: 3 (lower is better) Translates to: TRARRWVVGRVD*SLGTWSVTCRG Trigger: CCCTCTGCAGGTCACACTCCAGGTCCCCAAACTCCAGTCAACTCTCCCAACAACCCACCTCCGAGCCCTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143623.8 |
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| 3UTR CCA 72 bp | GTGACCTGCAGAGGGGTGCGAGCTTTGCGGTTCATCTaGGTTGTCTCCTTGGATAACCGGGGAGCTGGGAAT | + |
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Preference number: 3 (lower is better) Translates to: VTCRGVRALRFI*VVSLDNRGAGN Trigger: ATTCCCAGCTCCCCGGTTATCCAAGGAGACAACCCAGATGAACCGCAAAGCTCGCACCCCTCTGCAGGTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143623.8 |
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| 3UTR-3UTR CAA 90 bp | ACCTGCAGAGGGGTGCGAGCTTTGCGGTTCATCTGGGTTGTCTCCTTGGATAACTCAGGATCGAAGGGCTaGCCTGAGATTTCAGGACGC | + |
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Preference number: 3 (lower is better) Translates to: TCRGVRALRFIWVVSLDNSGSKG*PEISGR Trigger: GCGTCCTGAAATCTCAGGCAAGCCCTTCGATCCTGA...GTTATCCAAGGAGACAACCCAGATGAACCGCAAAGCTCGCACCCCTCTGCAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143623.8 |
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| 3UTR TCA 72 bp | CTGTTTCGTCTGACTGTCAGGATCGAAGGGCTTGCCTaGGATTTCAGGACGCAGCCCATTACAGGCGTTGAG | + |
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Preference number: 3 (lower is better) Translates to: LFRLTVRIEGLA*DFRTQPITGVE Trigger: CTCAACGCCTGTAATGGGCTGCGTCCTGAAATCTCAGGCAAGCCCTTCGATCCTGACAGTCAGACGAAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143623.8 |
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| 3UTR GCA 72 bp | TCTTCTGTTTCGTCTGACTGTCAGGATCGAAGGGCTTaGCTGAGATTTCAGGACGCAGCCCATTACAGGCGT | + |
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Preference number: 3 (lower is better) Translates to: SSVSSDCQDRRA*LRFQDAAHYRR Trigger: ACGCCTGTAATGGGCTGCGTCCTGAAATCTCAGGCAAGCCCTTCGATCCTGACAGTCAGACGAAACAGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143623.8 |
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| 3UTR-3UTR CAA 90 bp | CACAATGTTTATTTCCCTAAATCTGCCTTCACTCCTGGCCCACCATTTCTCTGTGCTGGTAGTGTCTGCTaGGCAGGGCTGTCTGGCTTC | + |
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Preference number: 3 (lower is better) Translates to: HNVYFPKSAFTPGPPFLCAGSVC*AGLSGF Trigger: GAAGCCAGACAGCCCTGCCAAGCAGACACTACCAGC...ACAGAGAAATGGTGGGCCAGGAGTGAAGGCAGATTTAGGGAAATAAACATTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143623.8 |
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| 3UTR-3UTR CAA 90 bp | CTTACAAGGGCTCGGAGGTGGGTTGTTGGGAGAGTTGACTGGAGTTTGGGGACCAGTAGATCAGGATTCTaGTGTATCCATTTGGTGAGG | + |
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Preference number: 3 (lower is better) Translates to: LTRARRWVVGRVDWSLGTSRSGF*CIHLVR Trigger: CCTCACCAAATGGATACACAAGAATCCTGATCTACT...GGTCCCCAAACTCCAGTCAACTCTCCCAACAACCCACCTCCGAGCCCTTGTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143623.8 |
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| 3UTR CCA 72 bp | GTCTCCTTGGATAACCGGGGAGCTGGGAATTATGGTTaGATTTGGTGCTTGTTGTACAGTCTTGGTGACAGA | + |
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Preference number: 3 (lower is better) Translates to: VSLDNRGAGNYG*IWCLLYSLGDR Trigger: TCTGTCACCAAGACTGTACAACAAGCACCAAATCCAACCATAATTCCCAGCTCCCCGGTTATCCAAGGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143623.8 |
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| 3UTR-3UTR CAA 90 bp | ATGTTTATTTCCCTAAATCTGCCTTCACTCCTGGCCCACCATTTCTCTGTTCCAAGCCCATTACAGGCGTaGAGTAGATCAGGATTCTTG | + |
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Preference number: 3 (lower is better) Translates to: MFISLNLPSLLAHHFSVPSPLQA*SRSGFL Trigger: CAAGAATCCTGATCTACTCAACGCCTGTAATGGGCT...TGGAACAGAGAAATGGTGGGCCAGGAGTGAAGGCAGATTTAGGGAAATAAACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143623.8 |
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| 3UTR CCA 72 bp | TTGGATAACCGGGGAGCTGGGAATTATGGTTGGATTTaGTGCTTGTTGTACAGTCTTGGTGACAGATTTCTT | + |
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Preference number: 3 (lower is better) Translates to: LDNRGAGNYGWI*CLLYSLGDRFL Trigger: AAGAAATCTGTCACCAAGACTGTACAACAAGCACCAAATCCAACCATAATTCCCAGCTCCCCGGTTATCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143623.8 |
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| CDS-3UTR TCA 90 bp | TGGAGTTTGGGGACCTGGAGTGTGACCTGCAGAGGGGTGCGAGCTTTGCGGTTCCTTGGAACGGGGCACTaGAGGCAAGAGATGCCCTCG | + |
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Preference number: 4 (lower is better) Translates to: WSLGTWSVTCRGVRALRFLGTGH*RQEMPS Trigger: CGAGGGCATCTCTTGCCTTCAGTGCCCCGTTCCAAG...GAACCGCAAAGCTCGCACCCCTCTGCAGGTCACACTCCAGGTCCCCAAACTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000143623.8 |
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| 3UTR CAA 72 bp | GGGACCTGGAGTGTGACCTGCAGAGGGGTGCGAGCTTaGCGGTTCATCTGGGTTGTCTCCTTGGATAACCGG | + |
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Preference number: 4 (lower is better) Translates to: GTWSVTCRGVRA*RFIWVVSLDNR Trigger: CCGGTTATCCAAGGAGACAACCCAGATGAACCGCAAAGCTCGCACCCCTCTGCAGGTCACACTCCAGGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143623.8 |
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| 3UTR CAA 72 bp | CCTGCAGAGGGGTGCGAGCTTTGCGGTTCATCTGGGTaGTCTCCTTGGATAACCGGGGAGCTGGGAATTATG | + |
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Preference number: 4 (lower is better) Translates to: PAEGCELCGSSG*SPWITGELGIM Trigger: CATAATTCCCAGCTCCCCGGTTATCCAAGGAGACAACCCAGATGAACCGCAAAGCTCGCACCCCTCTGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143623.8 |
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| 3UTR CAA 72 bp | TACTTGGTGCTCTTACAAGGGCTCGGAGGTGGGTTGTaGGGAGAGTTGACTGGAGTTTGGGGACCTGGAGTG | + |
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Preference number: 4 (lower is better) Translates to: YLVLLQGLGGGL*GELTGVWGPGV Trigger: CACTCCAGGTCCCCAAACTCCAGTCAACTCTCCCAACAACCCACCTCCGAGCCCTTGTAAGAGCACCAAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143623.8 |
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| 3UTR CAA 72 bp | ACCTACTTGGTGCTCTTACAAGGGCTCGGAGGTGGGTaGTTGGGAGAGTTGACTGGAGTTTGGGGACCTGGA | + |
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Preference number: 4 (lower is better) Translates to: TYLVLLQGLGGG*LGELTGVWGPG Trigger: TCCAGGTCCCCAAACTCCAGTCAACTCTCCCAACAACCCACCTCCGAGCCCTTGTAAGAGCACCAAGTAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143623.8 |
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| 3UTR CAA 72 bp | GGGGTGCGAGCTTTGCGGTTCATCTGGGTTGTCTCCTaGGATAACCGGGGAGCTGGGAATTATGGTTGGATT | + |
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Preference number: 4 (lower is better) Translates to: GVRALRFIWVVS*DNRGAGNYGWI Trigger: AATCCAACCATAATTCCCAGCTCCCCGGTTATCCAAGGAGACAACCCAGATGAACCGCAAAGCTCGCACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143623.8 |
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| CDS-3UTR CCA 90 bp | AGACTAGGACCTACTTGGTGCTCTTACAAGGGCTCGGAGGTGGGTTGTTGGGAGAGTAAGGAAACACCTTaGAACGGGGCACTGAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: RLGPTWCSYKGSEVGCWESKETP*NGALKA Trigger: TGCCTTCAGTGCCCCGTTCCAAGGTGTTTCCTTACT...CTCCCAACAACCCACCTCCGAGCCCTTGTAAGAGCACCAAGTAGGTCCTAGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143623.8 |
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| CDS-3UTR TCA 90 bp | CACATTTCTGAATACAGGCAGGGTCTCACCTATTTCGGTCAGTCTCTAAAATGTTGGGGACCTGGAGTGTaGCCTGCAGAGGGGTGCGAG | + |
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Preference number: 4 (lower is better) Translates to: HISEYRQGLTYFGQSLKCWGPGV*PAEGCE Trigger: CTCGCACCCCTCTGCAGGTCACACTCCAGGTCCCCA...ACATTTTAGAGACTGACCGAAATAGGTGAGACCCTGCCTGTATTCAGAAATGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027959.11 |
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| CDS-3UTR CCA 90 bp | GATTCCATCGGTTTGTTCAGTTCGGCTGTTTTCCAGTCCCTTTCCTTCCAACTTGCTCAGCTCCGTCCTTaGAACGGGGCACTGAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: DSIGLFSSAVFQSLSFQLAQLRP*NGALKA Trigger: TGCCTTCAGTGCCCCGTTCCAAGGACGGAGCTGAGC...AAGTTGGAAGGAAAGGGACTGGAAAACAGCCGAACTGAACAAACCGATGGAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156789.8 |
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| CDS-3UTR TCA 90 bp | TTTATTTCCCTAAATCTGCCTTCACTCCTGGCCCACCATTTCTCTGTTCCACATCTTGGAACGGGGCACTaGAGGCAAGAGATGCCCTCG | + |
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Preference number: 4 (lower is better) Translates to: FISLNLPSLLAHHFSVPHLGTGH*RQEMPS Trigger: CGAGGGCATCTCTTGCCTTCAGTGCCCCGTTCCAAG...ATGTGGAACAGAGAAATGGTGGGCCAGGAGTGAAGGCAGATTTAGGGAAATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027959.11 ENSMUST00000143623.8 |
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| CDS-3UTR GCA 90 bp | TCTCTGTTCCACATTTCTGAATACAGGCAGGGTCTCACCTATTTCGGTCAGTCTGAGGGGTGCGAGCTTTaGGGTTCATCTGGGTTGTCT | + |
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Preference number: 4 (lower is better) Translates to: SLFHISEYRQGLTYFGQSEGCEL*GSSGLS Trigger: AGACAACCCAGATGAACCGCAAAGCTCGCACCCCTC...AGACTGACCGAAATAGGTGAGACCCTGCCTGTATTCAGAAATGTGGAACAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027959.11 |
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| CDS-3UTR CCA 90 bp | TTTATTTCCCTAAATCTGCCTTCACTCCTGGCCCACCATTTCTCTGTTCCACATTGGAGTTTGGGGACCTaGAGTGTGACCTGCAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: FISLNLPSLLAHHFSVPHWSLGT*SVTCRG Trigger: CCCTCTGCAGGTCACACTCCAGGTCCCCAAACTCCA...ATGTGGAACAGAGAAATGGTGGGCCAGGAGTGAAGGCAGATTTAGGGAAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027959.11 |
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| CDS-3UTR TCA 90 bp | ACCATTTCTCTGTTCCACATTTCTGAATACAGGCAGGGTCTCACCTATTTCGGTTTTGCCAGGTGCCCATaGAGGAACCCCAAGGACTTG | + |
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Preference number: 4 (lower is better) Translates to: TISLFHISEYRQGLTYFGFARCP*RNPKDL Trigger: CAAGTCCTTGGGGTTCCTTCATGGGCACCTGGCAAA...ACCGAAATAGGTGAGACCCTGCCTGTATTCAGAAATGTGGAACAGAGAAATGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027959.11 |
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| CDS-3UTR TCA 90 bp | ATTTCTGAATACAGGCAGGGTCTCACCTATTTCGGTCAGTCTCTAAAATGTCACATCGAAGGGCTTGCCTaGGATTTCAGGACGCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ISEYRQGLTYFGQSLKCHIEGLA*DFRTQP Trigger: GGGCTGCGTCCTGAAATCTCAGGCAAGCCCTTCGAT...GTGACATTTTAGAGACTGACCGAAATAGGTGAGACCCTGCCTGTATTCAGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027959.11 |
||
| CDS-3UTR GCA 90 bp | ACACACAATGTTTATTTCCCTAAATCTGCCTTCACTCCTGGCCCACCATTTCTCCAGGATCGAAGGGCTTaGCTGAGATTTCAGGACGCA | + |
|
Preference number: 4 (lower is better) Translates to: THNVYFPKSAFTPGPPFLQDRRA*LRFQDA Trigger: TGCGTCCTGAAATCTCAGGCAAGCCCTTCGATCCTG...GAGAAATGGTGGGCCAGGAGTGAAGGCAGATTTAGGGAAATAAACATTGTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027959.11 |
||
| CDS-3UTR CCA 90 bp | ATGTTTATTTCCCTAAATCTGCCTTCACTCCTGGCCCACCATTTCTCTGTTCCATCTCTTTCGTTGGCCTaGCAGGAGACCAGTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: MFISLNLPSLLAHHFSVPSLSLA*QETSSA Trigger: TGCAGAACTGGTCTCCTGCCAGGCCAACGAAAGAGA...TGGAACAGAGAAATGGTGGGCCAGGAGTGAAGGCAGATTTAGGGAAATAAACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027959.11 ENSMUST00000143623.8 |
||
| CDS-3UTR CCA 90 bp | CACAATGTTTATTTCCCTAAATCTGCCTTCACTCCTGGCCCACCATTTCTCTGTTCTCTTTCGTTGGCCTaGCAGGAGACCAGTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: HNVYFPKSAFTPGPPFLCSLSLA*QETSSA Trigger: TGCAGAACTGGTCTCCTGCCAGGCCAACGAAAGAGA...ACAGAGAAATGGTGGGCCAGGAGTGAAGGCAGATTTAGGGAAATAAACATTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027959.11 ENSMUST00000143623.8 |
||
| CDS-3UTR CCA 90 bp | ATTCCATCGGTTTGTTCAGTTCGGCTGTTTTCCAGTCCCTTTCCTTCCAACTTATCTCTTTCGTTGGCCTaGCAGGAGACCAGTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IPSVCSVRLFSSPFPSNLSLSLA*QETSSA Trigger: TGCAGAACTGGTCTCCTGCCAGGCCAACGAAAGAGA...TAAGTTGGAAGGAAAGGGACTGGAAAACAGCCGAACTGAACAAACCGATGGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156789.8 |
||
| CDS-3UTR CCA 90 bp | TTAACACACAATGTTTATTTCCCTAAATCTGCCTTCACTCCTGGCCCACCATTTCCCAAGGACTTGCCTTaGAACGGGGCACTGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LTHNVYFPKSAFTPGPPFPKDLP*NGALKA Trigger: TGCCTTCAGTGCCCCGTTCCAAGGCAAGTCCTTGGG...AAATGGTGGGCCAGGAGTGAAGGCAGATTTAGGGAAATAAACATTGTGTGTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027959.11 |
||
| CDS-3UTR CCA 90 bp | ATGTTTATTTCCCTAAATCTGCCTTCACTCCTGGCCCACCATTTCTCTGTTCCAGTTGGGAGAGTTGACTaGAGTTTGGGGACCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: MFISLNLPSLLAHHFSVPVGRVD*SLGTWS Trigger: ACTCCAGGTCCCCAAACTCCAGTCAACTCTCCCAAC...TGGAACAGAGAAATGGTGGGCCAGGAGTGAAGGCAGATTTAGGGAAATAAACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027959.11 |
||
| CDS-3UTR TCA 90 bp | GATTCCATCGGTTTGTTCAGTTCGGCTGTTTTCCAGTCCCTTTCCTTCCAACTTCTCGATCGTTGGCGATaGTCTGAGTGTAACCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DSIGLFSSAVFQSLSFQLLDRWR*SECNLH Trigger: ATGAAGGTTACACTCAGATCATCGCCAACGATCGAG...AAGTTGGAAGGAAAGGGACTGGAAAACAGCCGAACTGAACAAACCGATGGAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156789.8 |
||
| CDS-3UTR TCA 90 bp | GTTTATTTCCCTAAATCTGCCTTCACTCCTGGCCCACCATTTCTCTGTTCCACAGCCCATTACAGGCGTTaGGTAGATCAGGATTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VYFPKSAFTPGPPFLCSTAHYRR*VDQDSC Trigger: ACAAGAATCCTGATCTACTCAACGCCTGTAATGGGC...TGTGGAACAGAGAAATGGTGGGCCAGGAGTGAAGGCAGATTTAGGGAAATAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027959.11 |
||
| CDS-3UTR CCA 90 bp | GTTTATTTCCCTAAATCTGCCTTCACTCCTGGCCCACCATTTCTCTGTTCCACAGCTTTGCGGTTCATCTaGGTTGTCTCCTTGGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: VYFPKSAFTPGPPFLCSTALRFI*VVSLDN Trigger: GTTATCCAAGGAGACAACCCAGATGAACCGCAAAGC...TGTGGAACAGAGAAATGGTGGGCCAGGAGTGAAGGCAGATTTAGGGAAATAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027959.11 |
||
| CDS-3UTR CCA 90 bp | TTAACACACAATGTTTATTTCCCTAAATCTGCCTTCACTCCTGGCCCACCATTTACAAGGGCTCGGAGGTaGGTTGTTGGGAGAGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LTHNVYFPKSAFTPGPPFTRARR*VVGRVD Trigger: GTCAACTCTCCCAACAACCCACCTCCGAGCCCTTGT...AAATGGTGGGCCAGGAGTGAAGGCAGATTTAGGGAAATAAACATTGTGTGTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027959.11 |
||
| CDS-3UTR TCA 90 bp | ATGTTTATTTCCCTAAATCTGCCTTCACTCCTGGCCCACCATTTCTCTGTTCCACTCGATCGTTGGCGATaGTCTGAGTGTAACCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: MFISLNLPSLLAHHFSVPLDRWR*SECNLH Trigger: ATGAAGGTTACACTCAGATCATCGCCAACGATCGAG...TGGAACAGAGAAATGGTGGGCCAGGAGTGAAGGCAGATTTAGGGAAATAAACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027959.11 ENSMUST00000143623.8 |
||
| CDS-3UTR TCA 90 bp | TTTATTTCCCTAAATCTGCCTTCACTCCTGGCCCACCATTTCTCTGTTCCACATCTCGATCGTTGGCGATaGTCTGAGTGTAACCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FISLNLPSLLAHHFSVPHLDRWR*SECNLH Trigger: ATGAAGGTTACACTCAGATCATCGCCAACGATCGAG...ATGTGGAACAGAGAAATGGTGGGCCAGGAGTGAAGGCAGATTTAGGGAAATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027959.11 ENSMUST00000143623.8 |
||
| CDS-3UTR GCA 90 bp | TTCCACATTTCTGAATACAGGCAGGGTCTCACCTATTTCGGTCAGTCTCTAAAAATCTTCAGGGGCATTTaGCAGGTGCCCATGAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FHISEYRQGLTYFGQSLKIFRGI*QVPMKE Trigger: TTCCTTCATGGGCACCTGGCAAATGCCCCTGAAGAT...TTTTAGAGACTGACCGAAATAGGTGAGACCCTGCCTGTATTCAGAAATGTGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027959.11 |
||
| CDS-3UTR CCA 90 bp | GTTTATTTCCCTAAATCTGCCTTCACTCCTGGCCCACCATTTCTCTGTTCCACAGGGAGCTGGGAATTATaGTTGGATTTGGTGCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VYFPKSAFTPGPPFLCSTGSWEL*LDLVLV Trigger: AACAAGCACCAAATCCAACCATAATTCCCAGCTCCC...TGTGGAACAGAGAAATGGTGGGCCAGGAGTGAAGGCAGATTTAGGGAAATAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027959.11 |
||
| CDS-3UTR CCA 90 bp | CACAATGTTTATTTCCCTAAATCTGCCTTCACTCCTGGCCCACCATTTCTCTGTGCTGGGAATTATGGTTaGATTTGGTGCTTGTTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: HNVYFPKSAFTPGPPFLCAGNYG*IWCLLY Trigger: GTACAACAAGCACCAAATCCAACCATAATTCCCAGC...ACAGAGAAATGGTGGGCCAGGAGTGAAGGCAGATTTAGGGAAATAAACATTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027959.11 |
||
| CDS-3UTR GCA 90 bp | ACCATTTCTCTGTTCCACATTTCTGAATACAGGCAGGGTCTCACCTATTTCGGTTATGGTTGGATTTGGTaGTTGTTGTACAGTCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TISLFHISEYRQGLTYFGYGWIW*LLYSLG Trigger: ACCAAGACTGTACAACAAGCACCAAATCCAACCATA...ACCGAAATAGGTGAGACCCTGCCTGTATTCAGAAATGTGGAACAGAGAAATGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027959.11 |
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| CDS-3UTR CCA 90 bp | TTAACACACAATGTTTATTTCCCTAAATCTGCCTTCACTCCTGGCCCACCATTTAATTATGGTTGGATTTaGTGCTTGTTGTACAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LTHNVYFPKSAFTPGPPFNYGWI*CLLYSL Trigger: AAGACTGTACAACAAGCACCAAATCCAACCATAATT...AAATGGTGGGCCAGGAGTGAAGGCAGATTTAGGGAAATAAACATTGTGTGTTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027959.11 |
||
| CDS GCA 90 bp | ACCGGGCATGAAGGCGGGGCGACCAGGAGACGAGGAGGGACAGGCTaGGTCCGGGAGAAGGAACCGGAAGCTGAGGATGGGCCGAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TGHEGGATRRRGGTG*VREKEPEAEDGPSG Trigger: GCCACTCGGCCCATCCTCAGCTTCCGGTTCCTTCTCCCGGACGCAGCCTGTCCCTCCTCGTCTCCTGGTCGCCCCGCCTTCATGCCCGGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129651.8 |
||
| CDS GCA 90 bp | CGGGCGGTCAAGGTCACCTTAGCAGGTGGGATCTTCAGGGGCATTTaGCAGGTGCCCATGAAGGAACCCCAAGGACTTGCCTTGGAACGG | + |
|
Preference number: 5 (lower is better) Translates to: RAVKVTLAGGIFRGI*QVPMKEPQGLALER Trigger: CCGTTCCAAGGCAAGTCCTTGGGGTTCCTTCATGGGCACCTGGCAAATGCCCCTGAAGATCCCACCTGCTAAGGTGACCTTGACCGCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027959.11 ENSMUST00000129651.8 ENSMUST00000151340.8 |
||
| CDS CCA 90 bp | GTCGGCAGCTGTAGTTGTACGGGCGGTCAAGGTCACCTTAGCAGGTaGGATCTTCAGGGGCATTTGCCAGGTGCCCATGAAGGAACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: VGSCSCTGGQGHLSR*DLQGHLPGAHEGTP Trigger: TGGGGTTCCTTCATGGGCACCTGGCAAATGCCCCTGAAGATCCCACCTGCTAAGGTGACCTTGACCGCCCGTACAACTACAGCTGCCGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027959.11 ENSMUST00000124157.3 ENSMUST00000129651.8 ENSMUST00000151340.8 |
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| CDS TCA 90 bp | GGACTTCCATGTGCTAAGCTCAGCTCCGTCCTTGGAACGGGGCACTaGAGGCAAGAGATGCCCTCGATCGTTGGCGATGATCTGAGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: GLPCAKLSSVLGTGH*RQEMPSIVGDDLSV Trigger: TACACTCAGATCATCGCCAACGATCGAGGGCATCTCTTGCCTTCAGTGCCCCGTTCCAAGGACGGAGCTGAGCTTAGCACATGGAAGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156789.8 |
||
| CDS-3UTR CAA 90 bp | CTGTTCCACATTTCTGAATACAGGCAGGGTCTCACCTATTTCGGTCAGTCTCTACCCCAAGGACTTGCCTaGGAACGGGGCACTGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LFHISEYRQGLTYFGQSLPQGLA*ERGTEG Trigger: GCCTTCAGTGCCCCGTTCCAAGGCAAGTCCTTGGGG...TAGAGACTGACCGAAATAGGTGAGACCCTGCCTGTATTCAGAAATGTGGAACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027959.11 |
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| CDS TCA 90 bp | TGGAACGGGGCACTGAAGGCAAGAGATGCCCTCGATCGTTGGCGATaGTCTGAGTGTAACCTTCATGGGCAGCGATTTTCTCTTTCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: WNGALKARDALDRWR*SECNLHGQRFSLSL Trigger: CAACGAAAGAGAAAATCGCTGCCCATGAAGGTTACACTCAGATCATCGCCAACGATCGAGGGCATCTCTTGCCTTCAGTGCCCCGTTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000027959.11 ENSMUST00000124157.3 ENSMUST00000127394.8 ENSMUST00000129651.8 ENSMUST00000143623.8 ENSMUST00000151340.8 ENSMUST00000156789.8 |
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| CDS-3UTR CAA 90 bp | GTTTATTTCCCTAAATCTGCCTTCACTCCTGGCCCACCATTTCTCTGTTCCACAAGAGGGGTGCGAGCTTaGCGGTTCATCTGGGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: VYFPKSAFTPGPPFLCSTRGVRA*RFIWVV Trigger: GACAACCCAGATGAACCGCAAAGCTCGCACCCCTCT...TGTGGAACAGAGAAATGGTGGGCCAGGAGTGAAGGCAGATTTAGGGAAATAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027959.11 |
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| CDS-3UTR CAA 90 bp | CCATTTCTCTGTTCCACATTTCTGAATACAGGCAGGGTCTCACCTATTTCGGTCTCAGGATCGAAGGGCTaGCCTGAGATTTCAGGACGC | + |
|
Preference number: 5 (lower is better) Translates to: PFLCSTFLNTGRVSPISVSGSKG*PEISGR Trigger: GCGTCCTGAAATCTCAGGCAAGCCCTTCGATCCTGA...GACCGAAATAGGTGAGACCCTGCCTGTATTCAGAAATGTGGAACAGAGAAATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027959.11 |
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| CDS-3UTR CAA 90 bp | CACATTTCTGAATACAGGCAGGGTCTCACCTATTTCGGTCAGTCTCTAAAATGTGGGCTCGGAGGTGGGTaGTTGGGAGAGTTGACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: HISEYRQGLTYFGQSLKCGLGGG*LGELTG Trigger: TCCAGTCAACTCTCCCAACAACCCACCTCCGAGCCC...ACATTTTAGAGACTGACCGAAATAGGTGAGACCCTGCCTGTATTCAGAAATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027959.11 |
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| CDS CCA 90 bp | TCTGAGTGTAACCTTCATGGGCAGCGATTTTCTCTTTCGTTGGCCTaGCAGGAGACCAGTTCTGCAGGTACGTGGGTAAGTAAGCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SECNLHGQRFSLSLA*QETSSAGTWVSKLF Trigger: AAAAAGCTTACTTACCCACGTACCTGCAGAACTGGTCTCCTGCCAGGCCAACGAAAGAGAAAATCGCTGCCCATGAAGGTTACACTCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000027959.11 ENSMUST00000124157.3 ENSMUST00000127394.8 ENSMUST00000129651.8 ENSMUST00000143623.8 ENSMUST00000151340.8 ENSMUST00000156789.8 |
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| CDS-3UTR CAA 90 bp | ACACACAATGTTTATTTCCCTAAATCTGCCTTCACTCCTGGCCCACCATTTCTCGGGTTGTTGGGAGAGTaGACTGGAGTTTGGGGACCT | + |
|
Preference number: 5 (lower is better) Translates to: THNVYFPKSAFTPGPPFLGLLGE*TGVWGP Trigger: AGGTCCCCAAACTCCAGTCAACTCTCCCAACAACCC...GAGAAATGGTGGGCCAGGAGTGAAGGCAGATTTAGGGAAATAAACATTGTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027959.11 |
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| CDS-3UTR CAA 90 bp | CACATTTCTGAATACAGGCAGGGTCTCACCTATTTCGGTCAGTCTCTAAAATGTCTCGGAGGTGGGTTGTaGGGAGAGTTGACTGGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: HISEYRQGLTYFGQSLKCLGGGL*GELTGV Trigger: AACTCCAGTCAACTCTCCCAACAACCCACCTCCGAG...ACATTTTAGAGACTGACCGAAATAGGTGAGACCCTGCCTGTATTCAGAAATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027959.11 |
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| CDS-3UTR CAA 90 bp | CCATTTCTCTGTTCCACATTTCTGAATACAGGCAGGGTCTCACCTATTTCGGTCATCCATTTGGTGAGGTaGTCGGCAGCTGTAGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: PFLCSTFLNTGRVSPISVIHLVR*SAAVVV Trigger: TACAACTACAGCTGCCGACAACCTCACCAAATGGAT...GACCGAAATAGGTGAGACCCTGCCTGTATTCAGAAATGTGGAACAGAGAAATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027959.11 |
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| CDS-3UTR CAA 90 bp | GTTTATTTCCCTAAATCTGCCTTCACTCCTGGCCCACCATTTCTCTGTTCCACAGGTTGGATTTGGTGCTaGTTGTACAGTCTTGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: VYFPKSAFTPGPPFLCSTGWIWC*LYSLGD Trigger: GTCACCAAGACTGTACAACAAGCACCAAATCCAACC...TGTGGAACAGAGAAATGGTGGGCCAGGAGTGAAGGCAGATTTAGGGAAATAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027959.11 |
||
| CDS-3UTR CAA 90 bp | CAGTCCCTTTCCTTCCAACTTAAAATTTTCATTCTTAGGCTAAGTGTGATAAAGAGCTCAGCTCCGTCCTaGGAACGGGGCACTGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: QSLSFQLKIFILRLSVIKSSAPS*ERGTEG Trigger: GCCTTCAGTGCCCCGTTCCAAGGACGGAGCTGAGCT...CTTTATCACACTTAGCCTAAGAATGAAAATTTTAAGTTGGAAGGAAAGGGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000156789.8 |
||
| CDS-3UTR CAA 90 bp | TTTCTCTGTTCCACATTTCTGAATACAGGCAGGGTCTCACCTATTTCGGTCAGTAGCCCATTACAGGCGTaGAGTAGATCAGGATTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FLCSTFLNTGRVSPISVSSPLQA*SRSGFL Trigger: CAAGAATCCTGATCTACTCAACGCCTGTAATGGGCT...ACTGACCGAAATAGGTGAGACCCTGCCTGTATTCAGAAATGTGGAACAGAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027959.11 |
||
| CDS-3UTR CAA 90 bp | CCATTTCTCTGTTCCACATTTCTGAATACAGGCAGGGTCTCACCTATTTCGGTCGCTTGTTGTACAGTCTaGGTGACAGATTTCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PFLCSTFLNTGRVSPISVACCTV*VTDFFC Trigger: ACAGAAGAAATCTGTCACCAAGACTGTACAACAAGC...GACCGAAATAGGTGAGACCCTGCCTGTATTCAGAAATGTGGAACAGAGAAATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027959.11 |
||
| CDS-3UTR CAA 90 bp | ACCATTTCTCTGTTCCACATTTCTGAATACAGGCAGGGTCTCACCTATTTCGGTAGCTGGGAATTATGGTaGGATTTGGTGCTTGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: TISLFHISEYRQGLTYFGSWELW*DLVLVV Trigger: TACAACAAGCACCAAATCCAACCATAATTCCCAGCT...ACCGAAATAGGTGAGACCCTGCCTGTATTCAGAAATGTGGAACAGAGAAATGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027959.11 |
||
| CDS-3UTR CAA 90 bp | CACATTTCTGAATACAGGCAGGGTCTCACCTATTTCGGTCAGTCTCTAAAATGTAGTAGATCAGGATTCTaGTGTATCCATTTGGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: HISEYRQGLTYFGQSLKCSRSGF*CIHLVR Trigger: CCTCACCAAATGGATACACAAGAATCCTGATCTACT...ACATTTTAGAGACTGACCGAAATAGGTGAGACCCTGCCTGTATTCAGAAATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027959.11 |
||
| CDS-3UTR CAA 90 bp | TTTATTTCCCTAAATCTGCCTTCACTCCTGGCCCACCATTTCTCTGTTCCACATGAATTATGGTTGGATTaGGTGCTTGTTGTACAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: FISLNLPSLLAHHFSVPHELWLD*VLVVQS Trigger: AGACTGTACAACAAGCACCAAATCCAACCATAATTC...ATGTGGAACAGAGAAATGGTGGGCCAGGAGTGAAGGCAGATTTAGGGAAATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027959.11 |
||
| CDS CAA 90 bp | ACGGGCGGTCAAGGTCACCTTAGCAGGTGGGATCTTCAGGGGCATTaGCCAGGTGCCCATGAAGGAACCCCAAGGACTTGCCTTGGAACG | + |
|
Preference number: 6 (lower is better) Translates to: TGGQGHLSRWDLQGH*PGAHEGTPRTCLGT Trigger: CGTTCCAAGGCAAGTCCTTGGGGTTCCTTCATGGGCACCTGGCAAATGCCCCTGAAGATCCCACCTGCTAAGGTGACCTTGACCGCCCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027959.11 ENSMUST00000129651.8 ENSMUST00000151340.8 |
||
| CDS TCA 72 bp | GAAGGAACCCCAAGGACTTGCCTTGGAACGGGGCACTaGAGGCAAGAGATGCCCTCGATCGTTGGCGATGAT | + |
|
Preference number: 6 (lower is better) Translates to: EGTPRTCLGTGH*RQEMPSIVGDD Trigger: ATCATCGCCAACGATCGAGGGCATCTCTTGCCTTCAGTGCCCCGTTCCAAGGCAAGTCCTTGGGGTTCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027959.11 ENSMUST00000129651.8 ENSMUST00000151340.8 |
||
| CDS TCA 72 bp | TGTGCTAAGCTCAGCTCCGTCCTTGGAACGGGGCACTaGAGGCAAGAGATGCCCTCGATCGTTGGCGATGAT | + |
|
Preference number: 6 (lower is better) Translates to: CAKLSSVLGTGH*RQEMPSIVGDD Trigger: ATCATCGCCAACGATCGAGGGCATCTCTTGCCTTCAGTGCCCCGTTCCAAGGACGGAGCTGAGCTTAGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156789.8 |
||
| CDS GCA 72 bp | AAGGTCACCTTAGCAGGTGGGATCTTCAGGGGCATTTaGCAGGTGCCCATGAAGGAACCCCAAGGACTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: KVTLAGGIFRGI*QVPMKEPQGLA Trigger: GGCAAGTCCTTGGGGTTCCTTCATGGGCACCTGGCAAATGCCCCTGAAGATCCCACCTGCTAAGGTGACCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027959.11 ENSMUST00000124157.3 ENSMUST00000129651.8 ENSMUST00000151340.8 |
||
| CDS CAA 72 bp | CAAGGTCACCTTAGCAGGTGGGATCTTCAGGGGCATTaGCCAGGTGCCCATGAAGGAACCCCAAGGACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: QGHLSRWDLQGH*PGAHEGTPRTC Trigger: GCAAGTCCTTGGGGTTCCTTCATGGGCACCTGGCAAATGCCCCTGAAGATCCCACCTGCTAAGGTGACCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027959.11 ENSMUST00000124157.3 ENSMUST00000129651.8 ENSMUST00000151340.8 |
||
| CDS CAA 90 bp | ACGGGCGGTCAAGGTCACCTTAGCAGGTGGGATCTTCAGGGGCATTaGCCAGGTGCCCATGAAGGAACCCCAAGGACTTGCCAAGTAAAA | + |
|
Preference number: 6 (lower is better) Translates to: TGGQGHLSRWDLQGH*PGAHEGTPRTCQVK Trigger: TTTTACTTGGCAAGTCCTTGGGGTTCCTTCATGGGCACCTGGCAAATGCCCCTGAAGATCCCACCTGCTAAGGTGACCTTGACCGCCCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124157.3 |
||
| CDS CCA 72 bp | TGTAGTTGTACGGGCGGTCAAGGTCACCTTAGCAGGTaGGATCTTCAGGGGCATTTGCCAGGTGCCCATGAA | + |
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Preference number: 6 (lower is better) Translates to: CSCTGGQGHLSR*DLQGHLPGAHE Trigger: TTCATGGGCACCTGGCAAATGCCCCTGAAGATCCCACCTGCTAAGGTGACCTTGACCGCCCGTACAACTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027959.11 ENSMUST00000124157.3 ENSMUST00000129651.8 ENSMUST00000151340.8 |
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| CDS CCA 72 bp | AGTGTAACCTTCATGGGCAGCGATTTTCTCTTTCGTTaGCCTGGCAGGAGACCAGTTCTGCAGGTACGTGGG | + |
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Preference number: 6 (lower is better) Translates to: SVTFMGSDFLFR*PGRRPVLQVRG Trigger: CCCACGTACCTGCAGAACTGGTCTCCTGCCAGGCCAACGAAAGAGAAAATCGCTGCCCATGAAGGTTACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000027959.11 ENSMUST00000124157.3 ENSMUST00000127394.8 ENSMUST00000129651.8 ENSMUST00000143623.8 ENSMUST00000151340.8 ENSMUST00000156789.8 |
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| CDS CAA 72 bp | GAGTGTAACCTTCATGGGCAGCGATTTTCTCTTTCGTaGGCCTGGCAGGAGACCAGTTCTGCAGGTACGTGG | + |
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Preference number: 6 (lower is better) Translates to: ECNLHGQRFSLS*AWQETSSAGTW Trigger: CCACGTACCTGCAGAACTGGTCTCCTGCCAGGCCAACGAAAGAGAAAATCGCTGCCCATGAAGGTTACACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000027959.11 ENSMUST00000124157.3 ENSMUST00000127394.8 ENSMUST00000129651.8 ENSMUST00000143623.8 ENSMUST00000151340.8 ENSMUST00000156789.8 |
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| CDS TCA 72 bp | GCTAAGTGTGATAAAGGAGTCCTTGGAACGGGGCACTaGAGGCAAGAGATGCCCTCGATCGTTGGCGATGAT | + |
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Preference number: 6 (lower is better) Translates to: AKCDKGVLGTGH*RQEMPSIVGDD Trigger: ATCATCGCCAACGATCGAGGGCATCTCTTGCCTTCAGTGCCCCGTTCCAAGGACTCCTTTATCACACTTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124157.3 |
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| CDS CCA 72 bp | AACCTTCATGGGCAGCGATTTTCTCTTTCGTTGGCCTaGCAGGAGACCAGTTCTGCAGGTACGTGGGTAAGT | + |
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Preference number: 6 (lower is better) Translates to: NLHGQRFSLSLA*QETSSAGTWVS Trigger: ACTTACCCACGTACCTGCAGAACTGGTCTCCTGCCAGGCCAACGAAAGAGAAAATCGCTGCCCATGAAGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000027959.11 ENSMUST00000124157.3 ENSMUST00000127394.8 ENSMUST00000129651.8 ENSMUST00000143623.8 ENSMUST00000151340.8 ENSMUST00000156789.8 |
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| CDS CAA 90 bp | CAGGCGTTGAGTAGATCAGGATTCTTGTGTATCCATTTGGTGAGGTaGTCGGCAGCTGTAGTTGTACGGGCGGTCAAGGTCACCTTAGCA | + |
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Preference number: 6 (lower is better) Translates to: QALSRSGFLCIHLVR*SAAVVVRAVKVTLA Trigger: TGCTAAGGTGACCTTGACCGCCCGTACAACTACAGCTGCCGACAACCTCACCAAATGGATACACAAGAATCCTGATCTACTCAACGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027959.11 ENSMUST00000124157.3 ENSMUST00000129651.8 ENSMUST00000151340.8 |
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| CDS TCA 72 bp | GCACTGAAGGCAAGAGATGCCCTCGATCGTTGGCGATaGTCTGAGTGTAACCTTCATGGGCAGCGATTTTCT | + |
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Preference number: 6 (lower is better) Translates to: ALKARDALDRWR*SECNLHGQRFS Trigger: AGAAAATCGCTGCCCATGAAGGTTACACTCAGATCATCGCCAACGATCGAGGGCATCTCTTGCCTTCAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000027959.11 ENSMUST00000124157.3 ENSMUST00000127394.8 ENSMUST00000129651.8 ENSMUST00000143623.8 ENSMUST00000151340.8 ENSMUST00000156789.8 |
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| CDS CCA 72 bp | TCGTTGGCCTGGCAGGAGACCAGTTCTGCAGGTACGTaGGTAAGTAAGCTTTTTCATACTGGTTGGCACTGT | + |
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Preference number: 6 (lower is better) Translates to: SLAWQETSSAGT*VSKLFHTGWHC Trigger: ACAGTGCCAACCAGTATGAAAAAGCTTACTTACCCACGTACCTGCAGAACTGGTCTCCTGCCAGGCCAACGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000027959.11 ENSMUST00000127394.8 ENSMUST00000143623.8 ENSMUST00000151340.8 ENSMUST00000156789.8 |
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| CDS CAA 72 bp | CAGGCGTTGAGTAGATCAGGATTCTTGTGTATCCATTaGGTGAGGTTGTCGGCAGCTGTAGTTGTACGGGCG | + |
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Preference number: 6 (lower is better) Translates to: QALSRSGFLCIH*VRLSAAVVVRA Trigger: CGCCCGTACAACTACAGCTGCCGACAACCTCACCAAATGGATACACAAGAATCCTGATCTACTCAACGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027959.11 ENSMUST00000124157.3 ENSMUST00000129651.8 ENSMUST00000151340.8 |
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| CDS CAA 72 bp | AGTAGATCAGGATTCTTGTGTATCCATTTGGTGAGGTaGTCGGCAGCTGTAGTTGTACGGGCGGTCAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: SRSGFLCIHLVR*SAAVVVRAVKV Trigger: GACCTTGACCGCCCGTACAACTACAGCTGCCGACAACCTCACCAAATGGATACACAAGAATCCTGATCTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027959.11 ENSMUST00000124157.3 ENSMUST00000129651.8 ENSMUST00000151340.8 |
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| CDS CAA 90 bp | ATTTCAGGACGCAGCCCATTACAGGCGTTGAGTAGATCAGGATTCTaGTGTATCCATTTGGTGAGGTTGTCGGCAGCTGTAGTTGTACGG | + |
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Preference number: 6 (lower is better) Translates to: ISGRSPLQALSRSGF*CIHLVRLSAAVVVR Trigger: CCGTACAACTACAGCTGCCGACAACCTCACCAAATGGATACACAAGAATCCTGATCTACTCAACGCCTGTAATGGGCTGCGTCCTGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027959.11 ENSMUST00000124157.3 ENSMUST00000129651.8 ENSMUST00000151340.8 |
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