Pregenerated sensors for CES1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071047Ensembl transcript IDs: ENSMUST00000095211.5
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCAAACTCAAACCACAGCTACAAACATTTCTCTTCACTGGCTTCTaGCTACTTTCAACACAGTTCTTCAGACTCTGGGATGAGAAAGCT | + |
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Preference number: 1 (lower is better) Translates to: CKLKPQLQTFLFTGF*LLSTQFFRLWDEKA Trigger: AGCTTTCTCATCCCAGAGTCTGAAGAACTGTGTTGAAAGTAGGCAGAAGCCAGTGAAGAGAAATGTTTGTAGCTGTGGTTTGAGTTTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| 3UTR-3UTR CCA 90 bp | TTCTGCCTACTTTCAACACAGTTCTTCAGACTCTGGGATGAGAAAGCTCTCTGGACAGGACACCTTCTGTaGAACAGCATTGACCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: FCLLSTQFFRLWDEKALWTGHLL*NSIDQA Trigger: AGCCTGGTCAATGCTGTTCCACAGAAGGTGTCCTGT...CCAGAGAGCTTTCTCATCCCAGAGTCTGAAGAACTGTGTTGAAAGTAGGCAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| 3UTR-3UTR TCA 90 bp | AAACCACAGCTACAAACATTTCTCTTCACTGGCTTCTGCCTACTTTCAACACAGCTTCAGACTCTGGGATaGGAAAGCTCTCTGGGCTAC | + |
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Preference number: 2 (lower is better) Translates to: KPQLQTFLFTGFCLLSTQLQTLG*ESSLGY Trigger: GTAGCCCAGAGAGCTTTCTCATCCCAGAGTCTGAAG...CTGTGTTGAAAGTAGGCAGAAGCCAGTGAAGAGAAATGTTTGTAGCTGTGGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| 3UTR CCA 72 bp | ACACAGTTCTTCAGACTCTGGGATGAGAAAGCTCTCTaGGCTACAGGACACCTTCTGTGGAACAGCATTGAC | + |
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Preference number: 3 (lower is better) Translates to: TQFFRLWDEKAL*ATGHLLWNSID Trigger: GTCAATGCTGTTCCACAGAAGGTGTCCTGTAGCCCAGAGAGCTTTCTCATCCCAGAGTCTGAAGAACTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| 3UTR CCA 72 bp | GGCTTCTGCCTACTTTCAACACAGTTCTTCAGACTCTaGGATGAGAAAGCTCTCTGGGCTACAGGACACCTT | + |
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Preference number: 3 (lower is better) Translates to: GFCLLSTQFFRL*DEKALWATGHL Trigger: AAGGTGTCCTGTAGCCCAGAGAGCTTTCTCATCCCAGAGTCTGAAGAACTGTGTTGAAAGTAGGCAGAAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| 3UTR GCA 72 bp | AAACCACAGCTACAAACATTTCTCTTCACTGGCTTCTaGCTACTTTCAACACAGTTCTTCAGACTCTGGGAT | + |
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Preference number: 3 (lower is better) Translates to: KPQLQTFLFTGF*LLSTQFFRLWD Trigger: ATCCCAGAGTCTGAAGAACTGTGTTGAAAGTAGGCAGAAGCCAGTGAAGAGAAATGTTTGTAGCTGTGGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS-3UTR GCA 90 bp | GCTTCTGCCTACTTTCAACACAGTTCTTCAGACTCTGGGATGAGAAAGCTCTCTCTGGACCCACTGCAGTaGAGCCACCTGGTCCAAGTG | + |
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Preference number: 4 (lower is better) Translates to: ASAYFQHSSSDSGMRKLSLDPLQ*SHLVQV Trigger: CACTTGGACCAGGTGGCTGCACTGCAGTGGGTCCAG...AGAGAGCTTTCTCATCCCAGAGTCTGAAGAACTGTGTTGAAAGTAGGCAGAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS-3UTR CCA 90 bp | TCTGCCTACTTTCAACACAGTTCTTCAGACTCTGGGATGAGAAAGCTCTCTGGGCCATGGCCCGGAGGCTaGTCCAGAAAGCTACTTCCT | + |
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Preference number: 4 (lower is better) Translates to: SAYFQHSSSDSGMRKLSGPWPGG*SRKLLP Trigger: AGGAAGTAGCTTTCTGGACCAGCCTCCGGGCCATGG...CCCAGAGAGCTTTCTCATCCCAGAGTCTGAAGAACTGTGTTGAAAGTAGGCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS-3UTR TCA 90 bp | CCACAGCTACAAACATTTCTCTTCACTGGCTTCTGCCTACTTTCAACACAGTTCGTCTACCACAGGTGGTaGGGACAGGTGCCCCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: PQLQTFLFTGFCLLSTQFVYHRW*GQVPQS Trigger: GCTTTGGGGCACCTGTCCTCACCACCTGTGGTAGAC...GAACTGTGTTGAAAGTAGGCAGAAGCCAGTGAAGAGAAATGTTTGTAGCTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS-3UTR GCA 90 bp | CATTTCTCTTCACTGGCTTCTGCCTACTTTCAACACAGTTCTTCAGACTCTGGGGGTGGTGAGGACAGGTaGCCCAAAGCCATGCAAGTG | + |
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Preference number: 4 (lower is better) Translates to: HFSSLASAYFQHSSSDSGGGEDR*PKAMQV Trigger: CACTTGCATGGCTTTGGGGCACCTGTCCTCACCACC...CCCAGAGTCTGAAGAACTGTGTTGAAAGTAGGCAGAAGCCAGTGAAGAGAAATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS-3UTR CCA 90 bp | AAACCACAGCTACAAACATTTCTCTTCACTGGCTTCTGCCTACTTTCAACACAGGCCCAAGAGGGGGCTTaGCAAAGGGGACTCCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: KPQLQTFLFTGFCLLSTQAQEGA*QRGLPG Trigger: TCCTGGGAGTCCCCTTTGCCAAGCCCCCTCTTGGGC...CTGTGTTGAAAGTAGGCAGAAGCCAGTGAAGAGAAATGTTTGTAGCTGTGGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS-3UTR CCA 90 bp | ACAAACATTTCTCTTCACTGGCTTCTGCCTACTTTCAACACAGTTCTTCAGACTCTTCTCCCACCTCCATaGCCCGGAGGCTGGTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: TNISLHWLLPTFNTVLQTLLPPP*PGGWSR Trigger: TCTGGACCAGCCTCCGGGCCATGGAGGTGGGAGAAG...AGTCTGAAGAACTGTGTTGAAAGTAGGCAGAAGCCAGTGAAGAGAAATGTTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS-3UTR GCA 90 bp | GCTTCTGCCTACTTTCAACACAGTTCTTCAGACTCTGGGATGAGAAAGCTCTCTGTAGCAATGGCAACTTaGTCAGCCGCACGCCTTGTA | + |
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Preference number: 4 (lower is better) Translates to: ASAYFQHSSSDSGMRKLSVAMAT*SAARLV Trigger: TACAAGGCGTGCGGCTGAGCAAGTTGCCATTGCTAC...AGAGAGCTTTCTCATCCCAGAGTCTGAAGAACTGTGTTGAAAGTAGGCAGAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS-3UTR CCA 90 bp | CATTTCTCTTCACTGGCTTCTGCCTACTTTCAACACAGTTCTTCAGACTCTGGGGACATCGGAGAGCACTaGCCCCACTCCTGTAATTTG | + |
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Preference number: 4 (lower is better) Translates to: HFSSLASAYFQHSSSDSGDIGEH*PHSCNL Trigger: CAAATTACAGGAGTGGGGCCAGTGCTCTCCGATGTC...CCCAGAGTCTGAAGAACTGTGTTGAAAGTAGGCAGAAGCCAGTGAAGAGAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS-3UTR TCA 90 bp | CAGCTACAAACATTTCTCTTCACTGGCTTCTGCCTACTTTCAACACAGTTCTTCGTTCATCTCCTGTGCTaGGGAAACCCCAGATGCCCA | + |
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Preference number: 4 (lower is better) Translates to: QLQTFLFTGFCLLSTQFFVHLLC*GNPRCP Trigger: TGGGCATCTGGGGTTTCCTCAGCACAGGAGATGAAC...GAAGAACTGTGTTGAAAGTAGGCAGAAGCCAGTGAAGAGAAATGTTTGTAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS-3UTR TCA 90 bp | AAACCACAGCTACAAACATTTCTCTTCACTGGCTTCTGCCTACTTTCAACACAGCAGGAGAGATGTGGCTaGCTTCTGGTCCAGTTTGCC | + |
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Preference number: 4 (lower is better) Translates to: KPQLQTFLFTGFCLLSTQQERCG*LLVQFA Trigger: GGCAAACTGGACCAGAAGTCAGCCACATCTCTCCTG...CTGTGTTGAAAGTAGGCAGAAGCCAGTGAAGAGAAATGTTTGTAGCTGTGGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS-3UTR TCA 90 bp | CTTTCAACACAGTTCTTCAGACTCTGGGATGAGAAAGCTCTCTGGGCTACAGGATTTGTCAGGGCAGTCTaGTCCTCCCAAATACTTCTC | + |
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Preference number: 4 (lower is better) Translates to: LSTQFFRLWDEKALWATGFVRAV*SSQILL Trigger: GAGAAGTATTTGGGAGGATCAGACTGCCCTGACAAA...TCCTGTAGCCCAGAGAGCTTTCTCATCCCAGAGTCTGAAGAACTGTGTTGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS-3UTR CCA 90 bp | AAACCACAGCTACAAACATTTCTCTTCACTGGCTTCTGCCTACTTTCAACACAGAGTAAACCGCCTCCATaGACCCATACCATCACCGGC | + |
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Preference number: 4 (lower is better) Translates to: KPQLQTFLFTGFCLLSTQSKPPP*THTITG Trigger: GCCGGTGATGGTATGGGTCCATGGAGGCGGTTTACT...CTGTGTTGAAAGTAGGCAGAAGCCAGTGAAGAGAAATGTTTGTAGCTGTGGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS-3UTR CCA 90 bp | AAACATTTCTCTTCACTGGCTTCTGCCTACTTTCAACACAGTTCTTCAGACTCTTCTGGGCTTGCTGGGTaGTGGCTCCGATCTGAAGGT | + |
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Preference number: 4 (lower is better) Translates to: KHFSSLASAYFQHSSSDSSGLAG*WLRSEG Trigger: ACCTTCAGATCGGAGCCACCACCCAGCAAGCCCAGA...AGAGTCTGAAGAACTGTGTTGAAAGTAGGCAGAAGCCAGTGAAGAGAAATGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS-3UTR CCA 90 bp | TCAAACCACAGCTACAAACATTTCTCTTCACTGGCTTCTGCCTACTTTCAACACTTGTCTTTGAGCCTCTaGGCTTGCTGGGTGGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: SNHSYKHFSSLASAYFQHLSLSL*ACWVVA Trigger: AGCCACCACCCAGCAAGCCCAGAGGCTCAAAGACAA...GTGTTGAAAGTAGGCAGAAGCCAGTGAAGAGAAATGTTTGTAGCTGTGGTTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS-3UTR CCA 90 bp | ATTTCTCTTCACTGGCTTCTGCCTACTTTCAACACAGTTCTTCAGACTCTGGGATCTGAGTGTCTCCCTTaGTTGCTTCTCCCACCTCCA | + |
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Preference number: 4 (lower is better) Translates to: ISLHWLLPTFNTVLQTLGSECLP*LLLPPP Trigger: TGGAGGTGGGAGAAGCAACCAAGGGAGACACTCAGA...TCCCAGAGTCTGAAGAACTGTGTTGAAAGTAGGCAGAAGCCAGTGAAGAGAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS-3UTR TCA 90 bp | AAACATTTCTCTTCACTGGCTTCTGCCTACTTTCAACACAGTTCTTCAGACTCTCTACTTCCTTGTCTTTaGGCCTCTGGGCTTGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: KHFSSLASAYFQHSSSDSLLPCL*ASGLAG Trigger: CCCAGCAAGCCCAGAGGCTCAAAGACAAGGAAGTAG...AGAGTCTGAAGAACTGTGTTGAAAGTAGGCAGAAGCCAGTGAAGAGAAATGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS-3UTR GCA 90 bp | ACCACAGCTACAAACATTTCTCTTCACTGGCTTCTGCCTACTTTCAACACAGTTCCCATGACTTTGCCTTaGAGGGTGTCTACCACAGGT | + |
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Preference number: 4 (lower is better) Translates to: TTATNISLHWLLPTFNTVPMTLP*RVSTTG Trigger: ACCTGTGGTAGACACCCTGCAAGGCAAAGTCATGGG...AACTGTGTTGAAAGTAGGCAGAAGCCAGTGAAGAGAAATGTTTGTAGCTGTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS-3UTR GCA 90 bp | AAACATTTCTCTTCACTGGCTTCTGCCTACTTTCAACACAGTTCTTCAGACTCTCAGGATCTCTTCAGGTaGCTTTGGCAGCACCACTCC | + |
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Preference number: 4 (lower is better) Translates to: KHFSSLASAYFQHSSSDSQDLFR*LWQHHS Trigger: GGAGTGGTGCTGCCAAAGGCACCTGAAGAGATCCTG...AGAGTCTGAAGAACTGTGTTGAAAGTAGGCAGAAGCCAGTGAAGAGAAATGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS-3UTR CCA 90 bp | ATTTCTCTTCACTGGCTTCTGCCTACTTTCAACACAGTTCTTCAGACTCTGGGATTAGCAATGTTGTTCTaGACCCACTGCAGTGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: ISLHWLLPTFNTVLQTLGLAMLF*THCSAA Trigger: GGCTGCACTGCAGTGGGTCCAGAACAACATTGCTAA...TCCCAGAGTCTGAAGAACTGTGTTGAAAGTAGGCAGAAGCCAGTGAAGAGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS-3UTR GCA 90 bp | CAACACAGTTCTTCAGACTCTGGGATGAGAAAGCTCTCTGGGCTACAGGACACCCATTTCGAGCAAAATTaGCCCAAAACTTCATCATCA | + |
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Preference number: 4 (lower is better) Translates to: QHSSSDSGMRKLSGLQDTHFEQN*PKTSSS Trigger: TGATGATGAAGTTTTGGGGCAATTTTGCTCGAAATG...GGTGTCCTGTAGCCCAGAGAGCTTTCTCATCCCAGAGTCTGAAGAACTGTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS-3UTR CCA 90 bp | TTTCTCTTCACTGGCTTCTGCCTACTTTCAACACAGTTCTTCAGACTCTGGGATCCAAATACTTCTCAGTaGCCACTGGAGTCAGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: FLFTGFCLLSTQFFRLWDPNTSQ*PLESVP Trigger: AGGAACTGACTCCAGTGGCCACTGAGAAGTATTTGG...ATCCCAGAGTCTGAAGAACTGTGTTGAAAGTAGGCAGAAGCCAGTGAAGAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS-3UTR CCA 90 bp | ACAAACATTTCTCTTCACTGGCTTCTGCCTACTTTCAACACAGTTCTTCAGACTCTCCATCAATCACGGTaGTCAGGAAAGGGTAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: TNISLHWLLPTFNTVLQTLHQSR*SGKGSS Trigger: AGAGCTACCCTTTCCTGACCACCGTGATTGATGGAG...AGTCTGAAGAACTGTGTTGAAAGTAGGCAGAAGCCAGTGAAGAGAAATGTTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS-3UTR CCA 90 bp | ACAAACATTTCTCTTCACTGGCTTCTGCCTACTTTCAACACAGTTCTTCAGACTGATGTGGCTGACTTCTaGTCCAGTTTGCCTTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: TNISLHWLLPTFNTVLQTDVADF*SSLPSE Trigger: CTCTGAAGGCAAACTGGACCAGAAGTCAGCCACATC...AGTCTGAAGAACTGTGTTGAAAGTAGGCAGAAGCCAGTGAAGAGAAATGTTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS-3UTR CCA 90 bp | AACTCAAACCACAGCTACAAACATTTCTCTTCACTGGCTTCTGCCTACTTTCAATCCACAGGAGAGATGTaGCTGACTTCTGGTCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: NSNHSYKHFSSLASAYFQSTGEM*LTSGPV Trigger: AACTGGACCAGAAGTCAGCCACATCTCTCCTGTGGA...TTGAAAGTAGGCAGAAGCCAGTGAAGAGAAATGTTTGTAGCTGTGGTTTGAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS-3UTR CCA 90 bp | ACAAACATTTCTCTTCACTGGCTTCTGCCTACTTTCAACACAGTTCTTCAGACTTTTGCCTTCAGAGAGTaGATAGCCCATCATCATTGG | + |
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Preference number: 4 (lower is better) Translates to: TNISLHWLLPTFNTVLQTFAFRE*IAHHHW Trigger: CCAATGATGATGGGCTATCCACTCTCTGAAGGCAAA...AGTCTGAAGAACTGTGTTGAAAGTAGGCAGAAGCCAGTGAAGAGAAATGTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS-3UTR CCA 90 bp | CAAACCACAGCTACAAACATTTCTCTTCACTGGCTTCTGCCTACTTTCAACACAATAGCCCATCATCATTaGAATAAACCAGCCAAACTC | + |
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Preference number: 4 (lower is better) Translates to: QTTATNISLHWLLPTFNTIAHHH*NKPAKL Trigger: GAGTTTGGCTGGTTTATTCCAATGATGATGGGCTAT...TGTGTTGAAAGTAGGCAGAAGCCAGTGAAGAGAAATGTTTGTAGCTGTGGTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS-3UTR CCA 90 bp | ACCACAGCTACAAACATTTCTCTTCACTGGCTTCTGCCTACTTTCAACACAGTTGTCGGACACAAAGCTTaGGTGATACTTAAACTCATA | + |
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Preference number: 4 (lower is better) Translates to: TTATNISLHWLLPTFNTVVGHKA*VILKLI Trigger: TATGAGTTTAAGTATCACCCAAGCTTTGTGTCCGAC...AACTGTGTTGAAAGTAGGCAGAAGCCAGTGAAGAGAAATGTTTGTAGCTGTGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS-3UTR CCA 90 bp | AAACATTTCTCTTCACTGGCTTCTGCCTACTTTCAACACAGTTCTTCAGACTCTGGAACATTTTCTAGTTaGTTAGTAAAGACATCGGAG | + |
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Preference number: 4 (lower is better) Translates to: KHFSSLASAYFQHSSSDSGTFSS*LVKTSE Trigger: CTCCGATGTCTTTACTAACCAACTAGAAAATGTTCC...AGAGTCTGAAGAACTGTGTTGAAAGTAGGCAGAAGCCAGTGAAGAGAAATGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS-3UTR CAA 90 bp | AAACCACAGCTACAAACATTTCTCTTCACTGGCTTCTGCCTACTTTCAACACAGGGCCCAAGAGGGGGCTaGGCAAAGGGGACTCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: KPQLQTFLFTGFCLLSTQGPRGG*AKGTPR Trigger: CCTGGGAGTCCCCTTTGCCAAGCCCCCTCTTGGGCC...CTGTGTTGAAAGTAGGCAGAAGCCAGTGAAGAGAAATGTTTGTAGCTGTGGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS-3UTR CAA 90 bp | CAACACAGTTCTTCAGACTCTGGGATGAGAAAGCTCTCTGGGCTACAGGACACCGCTACTTCCTTGTCTTaGAGCCTCTGGGCTTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: QHSSSDSGMRKLSGLQDTATSLS*SLWACW Trigger: CCAGCAAGCCCAGAGGCTCAAAGACAAGGAAGTAGC...GGTGTCCTGTAGCCCAGAGAGCTTTCTCATCCCAGAGTCTGAAGAACTGTGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS CCA 90 bp | AGTCCATCAAAAGTTGATGCTCCACCAGAGAGTAAACCGCCTCCATaGACCCATACCATCACCGGCAGCCTGTCTTTGCTTGTCAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: SPSKVDAPPESKPPP*THTITGSLSLLVRS Trigger: AGACCTGACAAGCAAAGACAGGCTGCCGGTGATGGTATGGGTCCATGGAGGCGGTTTACTCTCTGGTGGAGCATCAACTTTTGATGGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS CCA 90 bp | GCACCACTCCATCAATCACGGTGGTCAGGAAAGGGTAGCTCTCTCTaGGGTCTCCAAGCAAATCAAGAGCAAAGAATTTCATCTTCAGGG | + |
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Preference number: 5 (lower is better) Translates to: APLHQSRWSGKGSSL*GLQANQEQRISSSG Trigger: CCCTGAAGATGAAATTCTTTGCTCTTGATTTGCTTGGAGACCCCAGAGAGAGCTACCCTTTCCTGACCACCGTGATTGATGGAGTGGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS-3UTR CAA 90 bp | TTCTGCCTACTTTCAACACAGTTCTTCAGACTCTGGGATGAGAAAGCTCTCTGGAAAGCCATGCAAGTGTaGAGGGAAGCCAGGGCCAGA | + |
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Preference number: 5 (lower is better) Translates to: FCLLSTQFFRLWDEKALWKAMQV*REARAR Trigger: TCTGGCCCTGGCTTCCCTCAACACTTGCATGGCTTT...CCAGAGAGCTTTCTCATCCCAGAGTCTGAAGAACTGTGTTGAAAGTAGGCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS-3UTR CAA 90 bp | TCTGCCTACTTTCAACACAGTTCTTCAGACTCTGGGATGAGAAAGCTCTCTGGGTACTTCCCCATGACTTaGCCTTGCAGGGTGTCTACC | + |
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Preference number: 5 (lower is better) Translates to: SAYFQHSSSDSGMRKLSGYFPMT*PCRVST Trigger: GGTAGACACCCTGCAAGGCAAAGTCATGGGGAAGTA...CCCAGAGAGCTTTCTCATCCCAGAGTCTGAAGAACTGTGTTGAAAGTAGGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS-3UTR CAA 90 bp | ACCACAGCTACAAACATTTCTCTTCACTGGCTTCTGCCTACTTTCAACACAGTTTTTGAGCCTCTGGGCTaGCTGGGTGGTGGCTCCGAT | + |
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Preference number: 5 (lower is better) Translates to: TTATNISLHWLLPTFNTVFEPLG*LGGGSD Trigger: ATCGGAGCCACCACCCAGCAAGCCCAGAGGCTCAAA...AACTGTGTTGAAAGTAGGCAGAAGCCAGTGAAGAGAAATGTTTGTAGCTGTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS-3UTR CAA 90 bp | TTTCTCTTCACTGGCTTCTGCCTACTTTCAACACAGTTCTTCAGACTCTGGGATGAGTGTCTCCCTTGGTaGCTTCTCCCACCTCCATGG | + |
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Preference number: 5 (lower is better) Translates to: FLFTGFCLLSTQFFRLWDECLPW*LLPPPW Trigger: CCATGGAGGTGGGAGAAGCAACCAAGGGAGACACTC...ATCCCAGAGTCTGAAGAACTGTGTTGAAAGTAGGCAGAAGCCAGTGAAGAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS-3UTR CAA 90 bp | AACATTTCTCTTCACTGGCTTCTGCCTACTTTCAACACAGTTCTTCAGACTCTGACCGGCAGCCTGTCTTaGCTTGTCAGGTCTGTAGGG | + |
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Preference number: 5 (lower is better) Translates to: NISLHWLLPTFNTVLQTLTGSLS*LVRSVG Trigger: CCCTACAGACCTGACAAGCAAAGACAGGCTGCCGGT...CAGAGTCTGAAGAACTGTGTTGAAAGTAGGCAGAAGCCAGTGAAGAGAAATGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS-3UTR CAA 90 bp | CAGCTACAAACATTTCTCTTCACTGGCTTCTGCCTACTTTCAACACAGTTCTTCCGTAGCAATGGCAACTaGCTCAGCCGCACGCCTTGT | + |
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Preference number: 5 (lower is better) Translates to: QLQTFLFTGFCLLSTQFFRSNGN*LSRTPC Trigger: ACAAGGCGTGCGGCTGAGCAAGTTGCCATTGCTACG...GAAGAACTGTGTTGAAAGTAGGCAGAAGCCAGTGAAGAGAAATGTTTGTAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS-3UTR CAA 90 bp | ACAAACATTTCTCTTCACTGGCTTCTGCCTACTTTCAACACAGTTCTTCAGACTCCCCATGACTTTGCCTaGCAGGGTGTCTACCACAGG | + |
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Preference number: 5 (lower is better) Translates to: TNISLHWLLPTFNTVLQTPHDFA*QGVYHR Trigger: CCTGTGGTAGACACCCTGCAAGGCAAAGTCATGGGG...AGTCTGAAGAACTGTGTTGAAAGTAGGCAGAAGCCAGTGAAGAGAAATGTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS-3UTR CAA 90 bp | CTTTCAACACAGTTCTTCAGACTCTGGGATGAGAAAGCTCTCTGGGCTACAGGAGATGCCCAGACGGTATaGAATGACTACTATCACTAC | + |
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Preference number: 5 (lower is better) Translates to: LSTQFFRLWDEKALWATGDAQTV*NDYYHY Trigger: GTAGTGATAGTAGTCATTCAATACCGTCTGGGCATC...TCCTGTAGCCCAGAGAGCTTTCTCATCCCAGAGTCTGAAGAACTGTGTTGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS-3UTR CAA 90 bp | ACAAACATTTCTCTTCACTGGCTTCTGCCTACTTTCAACACAGTTCTTCAGACTCCCCACTCCTGTAATTaGCGAGCACATAGGAGGGTA | + |
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Preference number: 5 (lower is better) Translates to: TNISLHWLLPTFNTVLQTPHSCN*RAHRRV Trigger: TACCCTCCTATGTGCTCGCAAATTACAGGAGTGGGG...AGTCTGAAGAACTGTGTTGAAAGTAGGCAGAAGCCAGTGAAGAGAAATGTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS-3UTR CAA 90 bp | AAACATTTCTCTTCACTGGCTTCTGCCTACTTTCAACACAGTTCTTCAGACTCTAAACCAGCCAAACTCTaGCTTGTTGATGCCCACTAT | + |
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Preference number: 5 (lower is better) Translates to: KHFSSLASAYFQHSSSDSKPAKL*LVDAHY Trigger: ATAGTGGGCATCAACAAGCAAGAGTTTGGCTGGTTT...AGAGTCTGAAGAACTGTGTTGAAAGTAGGCAGAAGCCAGTGAAGAGAAATGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS GCA 72 bp | GCCAAGAGTTCCTCCTCTGTCTTCTCACGTAGACAGTaGACTATGTCGGCTGATGTAGTGGCCACACACCCC | + |
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Preference number: 6 (lower is better) Translates to: AKSSSSVFSRRQ*TMSADVVATHP Trigger: GGGGTGTGTGGCCACTACATCAGCCGACATAGTGCACTGTCTACGTGAGAAGACAGAGGAGGAACTCTTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS CCA 72 bp | AAAGTTGATGCTCCACCAGAGAGTAAACCGCCTCCATaGACCCATACCATCACCGGCAGCCTGTCTTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: KVDAPPESKPPP*THTITGSLSLL Trigger: AAGCAAAGACAGGCTGCCGGTGATGGTATGGGTCCATGGAGGCGGTTTACTCTCTGGTGGAGCATCAACTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS CCA 72 bp | CATCAATCACGGTGGTCAGGAAAGGGTAGCTCTCTCTaGGGTCTCCAAGCAAATCAAGAGCAAAGAATTTCA | + |
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Preference number: 6 (lower is better) Translates to: HQSRWSGKGSSL*GLQANQEQRIS Trigger: TGAAATTCTTTGCTCTTGATTTGCTTGGAGACCCCAGAGAGAGCTACCCTTTCCTGACCACCGTGATTGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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| CDS CAA 72 bp | GCAAATCAAGAGCAAAGAATTTCATCTTCAGGGTCGTaGCCAAGAGTTCCTCCTCTGTCTTCTCACGTAGAC | + |
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Preference number: 6 (lower is better) Translates to: ANQEQRISSSGS*PRVPPLSSHVD Trigger: GTCTACGTGAGAAGACAGAGGAGGAACTCTTGGCAACGACCCTGAAGATGAAATTCTTTGCTCTTGATTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095211.5 |
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