Pregenerated sensors for CERCAM (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039787Ensembl transcript IDs: ENSMUST00000047521.7, ENSMUST00000134152.2, ENSMUST00000154464.8
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCCCAGATGTGAGGCAGGGAGGGAATCACCAAGGCGGAGGTAGATaGAGGCAAAGTAGTTGGGTCCTCAGAGGGCAGGACTCTGGGCTC | + |
|
Preference number: 1 (lower is better) Translates to: APDVRQGGNHQGGGR*RQSSWVLRGQDSGL Trigger: GAGCCCAGAGTCCTGCCCTCTGAGGACCCAACTACTTTGCCTCCATCTACCTCCGCCTTGGTGATTCCCTCCCTGCCTCACATCTGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| 3UTR TCA 90 bp | CACTTTCCACCAACCAGGAAAGAGGGTGCTAATGGGCCCCAGATGTaGGGCAGGGAGGGAATCACCAAGGCGGAGGTAGATGGAGGCAAA | + |
|
Preference number: 1 (lower is better) Translates to: HFPPTRKEGANGPQM*GREGITKAEVDGGK Trigger: TTTGCCTCCATCTACCTCCGCCTTGGTGATTCCCTCCCTGCCTCACATCTGGGGCCCATTAGCACCCTCTTTCCTGGTTGGTGGAAAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| 3UTR GCA 90 bp | GAAGGCCTACTGCGTGTTGAGCACCAGGTATGCCTCCCATCTTCTTaGACTTTCCACCAACCAGGAAAGAGGGTGCTAATGGGCCCCAGA | + |
|
Preference number: 1 (lower is better) Translates to: EGLLRVEHQVCLPSS*TFHQPGKRVLMGPR Trigger: TCTGGGGCCCATTAGCACCCTCTTTCCTGGTTGGTGGAAAGTGCAAGAAGATGGGAGGCATACCTGGTGCTCAACACGCAGTAGGCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| 3UTR CCA 90 bp | AAGCTAGAGAAATCAGAGAGAAGTAGACAAGAGGTGGGTTGGGGATaGGAGAGAAGCAGGAGGAGGGAGGAGGAGAGAGCTGAGAAGGGA | + |
|
Preference number: 1 (lower is better) Translates to: KLEKSERSRQEVGWG*ERSRRREEERAEKG Trigger: TCCCTTCTCAGCTCTCTCCTCCTCCCTCCTCCTGCTTCTCTCCCATCCCCAACCCACCTCTTGTCTACTTCTCTCTGATTTCTCTAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| 3UTR CCA 90 bp | GAGACAAAGCTAGAGAAATCAGAGAGAAGTAGACAAGAGGTGGGTTaGGGATGGGAGAGAAGCAGGAGGAGGGAGGAGGAGAGAGCTGAG | + |
|
Preference number: 1 (lower is better) Translates to: ETKLEKSERSRQEVG*GWERSRRREEERAE Trigger: CTCAGCTCTCTCCTCCTCCCTCCTCCTGCTTCTCTCCCATCCCCAACCCACCTCTTGTCTACTTCTCTCTGATTTCTCTAGCTTTGTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| 3UTR GCA 90 bp | CAAGTGGCTTTTATTGAAGGCCTACTGCGTGTTGAGCACCAGGTATaGCTCCCATCTTCTTGCACTTTCCACCAACCAGGAAAGAGGGTG | + |
|
Preference number: 1 (lower is better) Translates to: QVAFIEGLLRVEHQV*LPSSCTFHQPGKRV Trigger: CACCCTCTTTCCTGGTTGGTGGAAAGTGCAAGAAGATGGGAGGCATACCTGGTGCTCAACACGCAGTAGGCCTTCAATAAAAGCCACTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| 3UTR TCA 90 bp | GTGCTTCTCCTCCCTTGGAATGAGTCCAGAGGACAGAAAACTAGCTaGGCCCAAAATAACAGTCAGATTTCTGCTGGCTGTCACCTCTTC | + |
|
Preference number: 1 (lower is better) Translates to: VLLLPWNESRGQKTS*AQNNSQISAGCHLF Trigger: GAAGAGGTGACAGCCAGCAGAAATCTGACTGTTATTTTGGGCTCAGCTAGTTTTCTGTCCTCTGGACTCATTCCAAGGGAGGAGAAGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| 3UTR-3UTR CCA 90 bp | GTGGCTTTTATTGAAGGCCTACTGCGTGTTGAGCACCAGGTATGCCTCCCATCTGCCCGGGCCGTGGACTaGTCCTCTTCTAGGTCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: VAFIEGLLRVEHQVCLPSARAVD*SSSRSS Trigger: GCTGGACCTAGAAGAGGACCAGTCCACGGCCCGGGC...AGATGGGAGGCATACCTGGTGCTCAACACGCAGTAGGCCTTCAATAAAAGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| 3UTR-3UTR CCA 90 bp | TTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCAAGTCCAGCCTGGTGTACAAAATTTGGATTCCCACTTaGACCTCATGGGCTAGCGGT | + |
|
Preference number: 2 (lower is better) Translates to: LGGRGRRISEFKSSLVYKIWIPT*TSWASG Trigger: ACCGCTAGCCCATGAGGTCCAAGTGGGAATCCAAAT...TTTGTACACCAGGCTGGACTTGAACTCAGAAATCCGCCTGCCTCTGCCTCCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| 3UTR-3UTR CCA 90 bp | GTGGCTTTTATTGAAGGCCTACTGCGTGTTGAGCACCAGGTATGCCTCCCATCTGTGCTTCTCCTCCCTTaGAATGAGTCCAGAGGACAG | + |
|
Preference number: 2 (lower is better) Translates to: VAFIEGLLRVEHQVCLPSVLLLP*NESRGQ Trigger: CTGTCCTCTGGACTCATTCCAAGGGAGGAGAAGCAC...AGATGGGAGGCATACCTGGTGCTCAACACGCAGTAGGCCTTCAATAAAAGCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| 3UTR-3UTR TCA 90 bp | TCCCTGTCCCTGAGCCCACTGGCTCTAAATTTGCAAGCAGAGTCAAGAGTCTTGTTAGTGTCTTCACTCTaGGACCTTCAGGAGTGGACT | + |
|
Preference number: 2 (lower is better) Translates to: SLSLSPLALNLQAESRVLLVSSL*DLQEWT Trigger: AGTCCACTCCTGAAGGTCTCAGAGTGAAGACACTAA...CAAGACTCTTGACTCTGCTTGCAAATTTAGAGCCAGTGGGCTCAGGGACAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| 3UTR-3UTR CCA 90 bp | TCCCTGTCCCTGAGCCCACTGGCTCTAAATTTGCAAGCAGAGTCAAGAGTCTTGCTCTCATCGCTCATTTaGATTCCCACTTGGACCTCA | + |
|
Preference number: 2 (lower is better) Translates to: SLSLSPLALNLQAESRVLLSSLI*IPTWTS Trigger: TGAGGTCCAAGTGGGAATCCAAATGAGCGATGAGAG...CAAGACTCTTGACTCTGCTTGCAAATTTAGAGCCAGTGGGCTCAGGGACAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| 3UTR-3UTR CCA 90 bp | AAAAGTCTTGGGGGTCTTAGTGTCTTCACTCTGAGACCTTCAGGAGTGGACTCTCAGTCAGATTTCTGCTaGCTGTCACCTCTTCCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: KSLGGLSVFTLRPSGVDSQSDFC*LSPLPL Trigger: GAGAGGAAGAGGTGACAGCCAGCAGAAATCTGACTG...AGAGTCCACTCCTGAAGGTCTCAGAGTGAAGACACTAAGACCCCCAAGACTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| 3UTR-3UTR CCA 90 bp | AGGAAAATCAGATGTAGAGATGTCAACAGCTATGGAGAGAGACAGACAGGTAGAAGACAAGAGGTGGGTTaGGGATGGGAGAGAAGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: RKIRCRDVNSYGERQTGRRQEVG*GWERSR Trigger: CCTGCTTCTCTCCCATCCCCAACCCACCTCTTGTCT...TCTACCTGTCTGTCTCTCTCCATAGCTGTTGACATCTCTACATCTGATTTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| 3UTR-3UTR CCA 90 bp | AGGAAAATCAGATGTAGAGATGTCAACAGCTATGGAGAGAGACAGACAGGTAGAGAAGTAGACAAGAGGTaGGTTGGGGATGGGAGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: RKIRCRDVNSYGERQTGREVDKR*VGDGRE Trigger: TTCTCTCCCATCCCCAACCCACCTCTTGTCTACTTC...TCTACCTGTCTGTCTCTCTCCATAGCTGTTGACATCTCTACATCTGATTTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| 3UTR CCA 72 bp | GTGAGGCAGGGAGGGAATCACCAAGGCGGAGGTAGATaGAGGCAAAGTAGTTGGGTCCTCAGAGGGCAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: VRQGGNHQGGGR*RQSSWVLRGQD Trigger: GTCCTGCCCTCTGAGGACCCAACTACTTTGCCTCCATCTACCTCCGCCTTGGTGATTCCCTCCCTGCCTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| 3UTR GCA 72 bp | AGAGTCAAGAGTCTTGGGGTAGCCAGGCAGTGGTGGTaGACGCCTTTAATCCCAGCACTTGGGAGGCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: RVKSLGVARQWW*TPLIPALGRQR Trigger: CCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCACCACCACTGCCTGGCTACCCCAAGACTCTTGACTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| 3UTR CCA 72 bp | AATCACCAAGGCGGAGGTAGATGGAGGCAAAGTAGTTaGGTCCTCAGAGGGCAGGACTCTGGGCTCCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: NHQGGGRWRQSS*VLRGQDSGLQP Trigger: TGGCTGGAGCCCAGAGTCCTGCCCTCTGAGGACCCAACTACTTTGCCTCCATCTACCTCCGCCTTGGTGATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| 3UTR CCA 72 bp | TCCTCTCCCCTCTCATCGCTCATTTGGATTCCCACTTaGACCTCATGGGCTAGCGGTCAAGGGGGCAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SSPLSSLIWIPT*TSWASGQGGKR Trigger: TCTCTTGCCCCCTTGACCGCTAGCCCATGAGGTCCAAGTGGGAATCCAAATGAGCGATGAGAGGGGAGAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| 3UTR CCA 72 bp | CTAGAGAAATCAGAGAGAAGTAGACAAGAGGTGGGTTaGGGATGGGAGAGAAGCAGGAGGAGGGAGGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LEKSERSRQEVG*GWERSRRREEE Trigger: CTCCTCCTCCCTCCTCCTGCTTCTCTCCCATCCCCAACCCACCTCTTGTCTACTTCTCTCTGATTTCTCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| 3UTR GCA 72 bp | ACTCTGAGACCTTCAGGAGTGGACTCTGTCTCTGAGTaGTTCTCCTCCCTTGGAATGAGTCCAGAGGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: TLRPSGVDSVSE*FSSLGMSPEDR Trigger: TCTGTCCTCTGGACTCATTCCAAGGGAGGAGAAGCACTCAGAGACAGAGTCCACTCCTGAAGGTCTCAGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| 3UTR GCA 72 bp | CTGCGTGTTGAGCACCAGGTATGCCTCCCATCTTCTTaGACTTTCCACCAACCAGGAAAGAGGGTGCTAATG | + |
|
Preference number: 3 (lower is better) Translates to: LRVEHQVCLPSS*TFHQPGKRVLM Trigger: CATTAGCACCCTCTTTCCTGGTTGGTGGAAAGTGCAAGAAGATGGGAGGCATACCTGGTGCTCAACACGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| 3UTR CCA 72 bp | CTCTCATCGCTCATTTGGATTCCCACTTGGACCTCATaGGCTAGCGGTCAAGGGGGCAAGAGAAAGAAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LSSLIWIPTWTS*ASGQGGKRKKR Trigger: CCTTTTCTTTCTCTTGCCCCCTTGACCGCTAGCCCATGAGGTCCAAGTGGGAATCCAAATGAGCGATGAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR CCA 90 bp | CTTCCTCTCCCCTCTCATCGCTCATTTGGATTCCCACTTGGACCTCATGGGCTAACCAGAGGGCCAGCCTaGCCCGGGGGTAGTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPLPSHRSFGFPLGPHGLTRGPA*PGGSPG Trigger: GCCTGGACTACCCCCGGGCCAGGCTGGCCCTCTGGT...TAGCCCATGAGGTCCAAGTGGGAATCCAAATGAGCGATGAGAGGGGAGAGGAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR CCA 90 bp | AGGAGGAGGGAGGAGGAGAGAGCTGAGAAGGGAAGCCCGGGCCGTGGACTGGTCACTGATGCCGTTCTTTaGTCCAGTGCTTGGGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: RRREEERAEKGSPGRGLVTDAVL*SSAWDP Trigger: AGGGTCCCAAGCACTGGACCAAAGAACGGCATCAGT...GACCAGTCCACGGCCCGGGCTTCCCTTCTCAGCTCTCTCCTCCTCCCTCCTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR CCA 90 bp | CTTCCTCTCCCCTCTCATCGCTCATTTGGATTCCCACTTGGACCTCATGGGCTACTCCCGAATAGTGGGTaGGGGAGGCAAGCAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPLPSHRSFGFPLGPHGLLPNSG*GRQAEA Trigger: GGCCTCTGCTTGCCTCCCCCACCCACTATTCGGGAG...TAGCCCATGAGGTCCAAGTGGGAATCCAAATGAGCGATGAGAGGGGAGAGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR GCA 90 bp | CTCTTCCTCTCCCCTCTCATCGCTCATTTGGATTCCCACTTGGACCTCATGGGCCATCCACAGGTAGCATaGGATGCAGGGGCTGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LFLSPLIAHLDSHLDLMGHPQVA*DAGAGM Trigger: CATCCCAGCCCCTGCATCGCATGCTACCTGTGGATG...GCCCATGAGGTCCAAGTGGGAATCCAAATGAGCGATGAGAGGGGAGAGGAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR GCA 90 bp | TCCCTGTCCCTGAGCCCACTGGCTCTAAATTTGCAAGCAGAGTCAAGAGTCTTGGGCTGTGTCCACTGCTaGCAGTCAGGTGCAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSPLALNLQAESRVLGCVHC*QSGAGG Trigger: CCCACCTGCACCTGACTGGCAGCAGTGGACACAGCC...CAAGACTCTTGACTCTGCTTGCAAATTTAGAGCCAGTGGGCTCAGGGACAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR CCA 90 bp | CTCTTCCTCTCCCCTCTCATCGCTCATTTGGATTCCCACTTGGACCTCATGGGCCTAGCTGAGAAGGCTTaGAGGTCCCGAGGCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LFLSPLIAHLDSHLDLMGLAEKA*RSRGQK Trigger: CTTCTGGCCTCGGGACCTCCAAGCCTTCTCAGCTAG...GCCCATGAGGTCCAAGTGGGAATCCAAATGAGCGATGAGAGGGGAGAGGAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR CCA 90 bp | CAAGTGGCTTTTATTGAAGGCCTACTGCGTGTTGAGCACCAGGTATGCCTCCCACCAGTCAGGTGCAGGTaGGGGCCACGAAGGGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QVAFIEGLLRVEHQVCLPPVRCR*GPRRAF Trigger: AAAGGCCCTTCGTGGCCCCCACCTGCACCTGACTGG...TGGGAGGCATACCTGGTGCTCAACACGCAGTAGGCCTTCAATAAAAGCCACTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR TCA 90 bp | CTCTTCCTCTCCCCTCTCATCGCTCATTTGGATTCCCACTTGGACCTCATGGGCAGTTCATCCCTGTGGTaGGGATGGAGGCTGTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LFLSPLIAHLDSHLDLMGSSSLW*GWRLCP Trigger: TGGACACAGCCTCCATCCTCACCACAGGGATGAACT...GCCCATGAGGTCCAAGTGGGAATCCAAATGAGCGATGAGAGGGGAGAGGAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR CCA 90 bp | CAAGTGGCTTTTATTGAAGGCCTACTGCGTGTTGAGCACCAGGTATGCCTCCCAGGGACCCTGTTCATCTaGGTAGGACCTGGCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QVAFIEGLLRVEHQVCLPGTLFI*VGPGLL Trigger: GAGGAGGCCAGGTCCTACCCAGATGAACAGGGTCCC...TGGGAGGCATACCTGGTGCTCAACACGCAGTAGGCCTTCAATAAAAGCCACTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR CCA 90 bp | GTGGCTTTTATTGAAGGCCTACTGCGTGTTGAGCACCAGGTATGCCTCCCATCTCAGCTCCCCAGTCCCTaGCAAAGGCCAGTGCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VAFIEGLLRVEHQVCLPSQLPSP*QRPVLP Trigger: AGGAAGCACTGGCCTTTGCCAGGGACTGGGGAGCTG...AGATGGGAGGCATACCTGGTGCTCAACACGCAGTAGGCCTTCAATAAAAGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR CCA 90 bp | TCCCTGTCCCTGAGCCCACTGGCTCTAAATTTGCAAGCAGAGTCAAGAGTCTTGACCCGGAAGCAGCCCTaGCGCTGGCGGTTCTTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSPLALNLQAESRVLTRKQP*RWRFLV Trigger: TACTAAGAACCGCCAGCGCCAGGGCTGCTTCCGGGT...CAAGACTCTTGACTCTGCTTGCAAATTTAGAGCCAGTGGGCTCAGGGACAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR GCA 90 bp | CTTCCTCTCCCCTCTCATCGCTCATTTGGATTCCCACTTGGACCTCATGGGCTATGGTCATTGCACACATaGATCGAGACCCCAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPLPSHRSFGFPLGPHGLWSLHT*IETPAA Trigger: GGCTGCTGGGGTCTCGATGCATGTGTGCAATGACCA...TAGCCCATGAGGTCCAAGTGGGAATCCAAATGAGCGATGAGAGGGGAGAGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR CCA 90 bp | ATGCAAGTGGCTTTTATTGAAGGCCTACTGCGTGTTGAGCACCAGGTATGCCTCCATTGCGGGCCAGGATaGCAAGGACCACGGTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: MQVAFIEGLLRVEHQVCLHCGPG*QGPRWV Trigger: TACCCACCGTGGTCCTTGCCATCCTGGCCCGCAATG...GAGGCATACCTGGTGCTCAACACGCAGTAGGCCTTCAATAAAAGCCACTTGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR TCA 90 bp | GGAAAATCAGATGTAGAGATGTCAACAGCTATGGAGAGAGACAGACAGGTAGAGGGGGGCCGAGATACATaGGCTGAGGCCAGCATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GKSDVEMSTAMERDRQVEGGRDT*AEASMG Trigger: CCCCATGCTGGCCTCAGCTCATGTATCTCGGCCCCC...CTCTACCTGTCTGTCTCTCTCCATAGCTGTTGACATCTCTACATCTGATTTTCC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR TCA 90 bp | GTGGCTTTTATTGAAGGCCTACTGCGTGTTGAGCACCAGGTATGCCTCCCATCTCCACGAAGGGCCTTTTaGGAGCCAGTCTGGCTAATG | + |
|
Preference number: 4 (lower is better) Translates to: VAFIEGLLRVEHQVCLPSPRRAF*EPVWLM Trigger: CATTAGCCAGACTGGCTCTCAAAAGGCCCTTCGTGG...AGATGGGAGGCATACCTGGTGCTCAACACGCAGTAGGCCTTCAATAAAAGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR GCA 90 bp | CTCTTCCTCTCCCCTCTCATCGCTCATTTGGATTCCCACTTGGACCTCATGGGCGCTGTTTCCTCAGTCTaGAAGGACAGCAGGAAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LFLSPLIAHLDSHLDLMGAVSSV*KDSRKV Trigger: TACCTTCCTGCTGTCCTTGCAGACTGAGGAAACAGC...GCCCATGAGGTCCAAGTGGGAATCCAAATGAGCGATGAGAGGGGAGAGGAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR CCA 90 bp | CAAGTGGCTTTTATTGAAGGCCTACTGCGTGTTGAGCACCAGGTATGCCTCCCAAGCCCACCTCACCCTTaGTCAGTGTGTGGCCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: QVAFIEGLLRVEHQVCLPSPPHP*SVCGLN Trigger: ATTCAGGCCACACACTGACCAAGGGTGAGGTGGGCT...TGGGAGGCATACCTGGTGCTCAACACGCAGTAGGCCTTCAATAAAAGCCACTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR GCA 90 bp | AGAAAAGGAAAATCAGATGTAGAGATGTCAACAGCTATGGAGAGAGACAGACAGCTGGCAGCCCGGAGCTaGTGCCCCAACAGGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RKGKSDVEMSTAMERDRQLAARS*CPNRSS Trigger: GCTGCTCCTGTTGGGGCAGCAGCTCCGGGCTGCCAG...CTGTCTGTCTCTCTCCATAGCTGTTGACATCTCTACATCTGATTTTCCTTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR GCA 90 bp | CTTCCTCTCCCCTCTCATCGCTCATTTGGATTCCCACTTGGACCTCATGGGCTAAAGGCCAGTGCTTCCTaGCTCAGCTCCATCAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LPLPSHRSFGFPLGPHGLKASAS*LSSIKN Trigger: GTTTTTGATGGAGCTGAGGCAGGAAGCACTGGCCTT...TAGCCCATGAGGTCCAAGTGGGAATCCAAATGAGCGATGAGAGGGGAGAGGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR GCA 90 bp | AGGAAAATCAGATGTAGAGATGTCAACAGCTATGGAGAGAGACAGACAGGTAGACTGCTGCCAGTCAGGTaGAGGTGGGGGCCACGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RKIRCRDVNSYGERQTGRLLPVR*RWGPRR Trigger: CCTTCGTGGCCCCCACCTGCACCTGACTGGCAGCAG...TCTACCTGTCTGTCTCTCTCCATAGCTGTTGACATCTCTACATCTGATTTTCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR CCA 90 bp | GGAAAATCAGATGTAGAGATGTCAACAGCTATGGAGAGAGACAGACAGGTAGAGGAGCTGAGGCCAGCATaGGGGGCCCATCCACTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GKSDVEMSTAMERDRQVEELRPA*GAHPLV Trigger: CACTAGTGGATGGGCCCCCCATGCTGGCCTCAGCTC...CTCTACCTGTCTGTCTCTCTCCATAGCTGTTGACATCTCTACATCTGATTTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR GCA 90 bp | AAAAGTCTTGGGGGTCTTAGTGTCTTCACTCTGAGACCTTCAGGAGTGGACTCTGGAAGTATTCAGCCGTaGGGCGATAGTAGCCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KSLGGLSVFTLRPSGVDSGSIQP*GDSSPV Trigger: CACAGGGCTACTATCGCCGCACGGCTGAATACTTCC...AGAGTCCACTCCTGAAGGTCTCAGAGTGAAGACACTAAGACCCCCAAGACTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR CCA 90 bp | GGAAAATCAGATGTAGAGATGTCAACAGCTATGGAGAGAGACAGACAGGTAGAGCATCTGGGTAGGACCTaGCCTCCTCCTCAGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GKSDVEMSTAMERDRQVEHLGRT*PPPQAS Trigger: GGAAGCCTGAGGAGGAGGCCAGGTCCTACCCAGATG...CTCTACCTGTCTGTCTCTCTCCATAGCTGTTGACATCTCTACATCTGATTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR TCA 90 bp | ATGCAAGTGGCTTTTATTGAAGGCCTACTGCGTGTTGAGCACCAGGTATGCCTCTCCGGAAGTTGTCCTTaGAGCGTACGTCATCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: MQVAFIEGLLRVEHQVCLSGSCP*SVRHPQ Trigger: TTGAGGATGACGTACGCTTCAAGGACAACTTCCGGA...GAGGCATACCTGGTGCTCAACACGCAGTAGGCCTTCAATAAAAGCCACTTGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR CCA 90 bp | GGAAAATCAGATGTAGAGATGTCAACAGCTATGGAGAGAGACAGACAGGTAGAGCCATGTTGTGATCTGTaGCACACCAGAGGGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GKSDVEMSTAMERDRQVEPCCDL*HTRGPA Trigger: GGCTGGCCCTCTGGTGTGCCACAGATCACAACATGG...CTCTACCTGTCTGTCTCTCTCCATAGCTGTTGACATCTCTACATCTGATTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR CCA 90 bp | CTCTTCCTCTCCCCTCTCATCGCTCATTTGGATTCCCACTTGGACCTCATGGGCAAGTATGCTTTGTACTaGTCATTTGGGTGGCGATCA | + |
|
Preference number: 4 (lower is better) Translates to: LFLSPLIAHLDSHLDLMGKYALY*SFGWRS Trigger: TGATCGCCACCCAAATGACCAGTACAAAGCATACTT...GCCCATGAGGTCCAAGTGGGAATCCAAATGAGCGATGAGAGGGGAGAGGAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR TCA 90 bp | AGAAAAGGAAAATCAGATGTAGAGATGTCAACAGCTATGGAGAGAGACAGACAGATGTCTCTGTGTCACTaGGCCACTCGGCGTCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RKGKSDVEMSTAMERDRQMSLCH*ATRRLP Trigger: CGGGAGACGCCGAGTGGCTCAGTGACACAGAGACAT...CTGTCTGTCTCTCTCCATAGCTGTTGACATCTCTACATCTGATTTTCCTTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR GCA 90 bp | AGGAAAATCAGATGTAGAGATGTCAACAGCTATGGAGAGAGACAGACAGGTAGACCTGGCAAAGGCCAGTaGTTCCTGCCTCAGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RKIRCRDVNSYGERQTGRPGKGQ*FLPQLH Trigger: ATGGAGCTGAGGCAGGAAGCACTGGCCTTTGCCAGG...TCTACCTGTCTGTCTCTCTCCATAGCTGTTGACATCTCTACATCTGATTTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR CCA 90 bp | CTCTTCCTCTCCCCTCTCATCGCTCATTTGGATTCCCACTTGGACCTCATGGGCGCTTCCAAAATGAGGTaGATAAAGTTCGTCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LFLSPLIAHLDSHLDLMGASKMR*IKFVFS Trigger: AGAGAAGACGAACTTTATCCACCTCATTTTGGAAGC...GCCCATGAGGTCCAAGTGGGAATCCAAATGAGCGATGAGAGGGGAGAGGAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR GCA 90 bp | AGGAAAATCAGATGTAGAGATGTCAACAGCTATGGAGAGAGACAGACAGGTAGAGAGAGTGTTCAGCATTaGGGGCCAGGATGGCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RKIRCRDVNSYGERQTGRESVQH*GPGWQG Trigger: TCCTTGCCATCCTGGCCCGCAATGCTGAACACTCTC...TCTACCTGTCTGTCTCTCTCCATAGCTGTTGACATCTCTACATCTGATTTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR CCA 90 bp | ATGAGTCCAGAGGACAGAAAACTAGCTGAGCCCAAAATAACAGTCAGATTTCTGCTTTGGTCCAGTGCTTaGGACCCTGTTCATCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: MSPEDRKLAEPKITVRFLLWSSA*DPVHLG Trigger: ACCCAGATGAACAGGGTCCCAAGCACTGGACCAAAG...CAGAAATCTGACTGTTATTTTGGGCTCAGCTAGTTTTCTGTCCTCTGGACTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR CCA 90 bp | TTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCAAGTCCAGCCTGGTGTACAAAAGAAGCTTCAGTGTCTaGTTGTTAGTAAGAATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LGGRGRRISEFKSSLVYKRSFSV*LLVRML Trigger: CAACATTCTTACTAACAACCAGACACTGAAGCTTCT...TTTGTACACCAGGCTGGACTTGAACTCAGAAATCCGCCTGCCTCTGCCTCCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR CCA 90 bp | CAAGTGGCTTTTATTGAAGGCCTACTGCGTGTTGAGCACCAGGTATGCCTCCCATCCCACACCAAAAGTTaGAATAATAGGTCTGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QVAFIEGLLRVEHQVCLPSHTKS*NNRSES Trigger: ACTCTCAGACCTATTATTCCAACTTTTGGTGTGGGA...TGGGAGGCATACCTGGTGCTCAACACGCAGTAGGCCTTCAATAAAAGCCACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR TCA 90 bp | AGAAAAGGAAAATCAGATGTAGAGATGTCAACAGCTATGGAGAGAGACAGACAGGTGTTGTCCATGTTGTaGTCTGTGGCACACCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RKGKSDVEMSTAMERDRQVLSML*SVAHQR Trigger: CCTCTGGTGTGCCACAGATCACAACATGGACAACAC...CTGTCTGTCTCTCTCCATAGCTGTTGACATCTCTACATCTGATTTTCCTTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR TCA 90 bp | AAAAGTCTTGGGGGTCTTAGTGTCTTCACTCTGAGACCTTCAGGAGTGGACTCTCATAGGCAAAGACAATaGTGTCATCAAAAGGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: KSLGGLSVFTLRPSGVDSHRQRQ*CHQKAN Trigger: GTTGGCCTTTTGATGACATCATTGTCTTTGCCTATG...AGAGTCCACTCCTGAAGGTCTCAGAGTGAAGACACTAAGACCCCCAAGACTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR TCA 90 bp | ATGAGTCCAGAGGACAGAAAACTAGCTGAGCCCAAAATAACAGTCAGATTTCTGGGTGGCGATCAAACATaGCAGGCAGGAATTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: MSPEDRKLAEPKITVRFLGGDQT*QAGIHP Trigger: TGGATGAATTCCTGCCTGTCATGTTTGATCGCCACC...CAGAAATCTGACTGTTATTTTGGGCTCAGCTAGTTTTCTGTCCTCTGGACTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR GCA 90 bp | GGAAAATCAGATGTAGAGATGTCAACAGCTATGGAGAGAGACAGACAGGTAGAGCCGAGGCCAGAAGTATaGTTTGTACTGGTCATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GKSDVEMSTAMERDRQVEPRPEV*FVLVIW Trigger: CCAAATGACCAGTACAAAGCATACTTCTGGCCTCGG...CTCTACCTGTCTGTCTCTCTCCATAGCTGTTGACATCTCTACATCTGATTTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR TCA 90 bp | AGAAAAGGAAAATCAGATGTAGAGATGTCAACAGCTATGGAGAGAGACAGACAGAGCTCCATCAAAAACTaGTGCCGTTCTTTGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RKGKSDVEMSTAMERDRQSSIKN*CRSLVQ Trigger: CTGGACCAAAGAACGGCATCAGTTTTTGATGGAGCT...CTGTCTGTCTCTCTCCATAGCTGTTGACATCTCTACATCTGATTTTCCTTTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS GCA 90 bp | ACCACGGTGGGTAGCGTCGGCTCTGTGACACTGGCAGCCCGGAGCTaGTGCCCCAACAGGAGCAGCAGAGGTAGGAGCCGCGCAACGTGC | + |
|
Preference number: 5 (lower is better) Translates to: TTVGSVGSVTLAARS*CPNRSSRGRSRATC Trigger: GCACGTTGCGCGGCTCCTACCTCTGCTGCTCCTGTTGGGGCAGCAGCTCCGGGCTGCCAGTGTCACAGAGCCGACGCTACCCACCGTGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS TCA 90 bp | GCACGTCCTCCATCAGCCGTTCTAGCCGCCTCCGGAAGTTGTCCTTaGAGCGTACGTCATCCTCAAACACCACGACCCGGGCCAGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: ARPPSAVLAASGSCP*SVRHPQTPRPGPGP Trigger: GGGGCCTGGCCCGGGTCGTGGTGTTTGAGGATGACGTACGCTTCAAGGACAACTTCCGGAGGCGGCTAGAACGGCTGATGGAGGACGTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS TCA 90 bp | GGCGACCACTGTCATCGTCCCAGGGGGAGGATGTCTCTGTGTCACTaGGCCACTCGGCGTCTCCCGAATAGTGGGTGGGGGAGGCAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GDHCHRPRGRMSLCH*ATRRLPNSGWGRQA Trigger: TGCTTGCCTCCCCCACCCACTATTCGGGAGACGCCGAGTGGCTCAGTGACACAGAGACATCCTCCCCCTGGGACGATGACAGTGGTCGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS CCA 90 bp | GTTGTCCATGTTGTGATCTGTGGCACACCTGCTCCAGACGCGTCCTaGGGTCCGCCTTCTCCGTGTGGACCTCGGAAGGCGTTGGCACGG | + |
|
Preference number: 5 (lower is better) Translates to: VVHVVICGTPAPDAS*GPPSPCGPRKALAR Trigger: CCGTGCCAACGCCTTCCGAGGTCCACACGGAGAAGGCGGACCCCAGGACGCGTCTGGAGCAGGTGTGCCACAGATCACAACATGGACAAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154464.8 |
||
| CDS TCA 90 bp | CCACTGCTGCCAGTCAGGTGCAGGTGGGGGCCACGAAGGGCCTTTTaGGAGCCAGTCTGGCTAATGAGGCGACCACTGTCATCGTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PLLPVRCRWGPRRAF*EPVWLMRRPLSSSQ Trigger: CTGGGACGATGACAGTGGTCGCCTCATTAGCCAGACTGGCTCTCAAAAGGCCCTTCGTGGCCCCCACCTGCACCTGACTGGCAGCAGTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS GCA 90 bp | GGAGCATCCCTGTGGTGTTGTCCATGTTGTGATCTGTGGCACACCTaGTCCAGACGCGTCCTGGGGTCCGCCTTCTCCGTGTGGACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: GASLWCCPCCDLWHT*SRRVLGSAFSVWTS Trigger: CGAGGTCCACACGGAGAAGGCGGACCCCAGGACGCGTCTGGAGCAGGTGTGCCACAGATCACAACATGGACAACACCACAGGGATGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154464.8 |
||
| CDS CCA 90 bp | GATATCTCCATCTCCCAGAGAGAGCTCAGCATTCGAGCCCGGCGCTaGGGTCTGCGGGCCAGGCTGATGACAAAGACTTCATCAAACCCC | + |
|
Preference number: 5 (lower is better) Translates to: DISISQRELSIRARR*GLRARLMTKTSSNP Trigger: GGGGTTTGATGAAGTCTTTGTCATCAGCCTGGCCCGCAGACCCCAGCGCCGGGCTCGAATGCTGAGCTCTCTCTGGGAGATGGAGATATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR CAA 90 bp | AGGAGGAGGGAGGAGGAGAGAGCTGAGAAGGGAAGCCCGGGCCGTGGACTGGTCTCCACACCGAGATGTTaGAGGATACTGCTGTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: RRREEERAEKGSPGRGLVSTPRC*RILLLS Trigger: ACTCAACAGCAGTATCCTCAAACATCTCGGTGTGGA...GACCAGTCCACGGCCCGGGCTTCCCTTCTCAGCTCTCTCCTCCTCCCTCCTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS CCA 90 bp | AAACTGATGCCGTTCTTTGGTCCAGTGCTTGGGACCCTGTTCATCTaGGTAGGACCTGGCCTCCTCCTCAGGCTTCCAGACGACAGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: KLMPFFGPVLGTLFI*VGPGLLLRLPDDSR Trigger: GCGACTGTCGTCTGGAAGCCTGAGGAGGAGGCCAGGTCCTACCCAGATGAACAGGGTCCCAAGCACTGGACCAAAGAACGGCATCAGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047521.7 ENSMUST00000154464.8 |
||
| CDS CCA 90 bp | AGAATGACTGTCCTGAGAGCGATGGGGCAGAGTTGTGCGCTCCAGTaGAGGTGCTGGAGGATGTCCTGTGTAGCCTCAGGCAAGGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: RMTVLRAMGQSCALQ*RCWRMSCVASGKVH Trigger: ATGGACCTTGCCTGAGGCTACACAGGACATCCTCCAGCACCTCCACTGGAGCGCACAACTCTGCCCCATCGCTCTCAGGACAGTCATTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134152.2 |
||
| CDS-3UTR CAA 90 bp | GTAGATGGAGGCAAAGTAGTTGGGTCCTCAGAGGGCAGGACTCTGGGCTCCAGCTCTTTGGTCCAGTGCTaGGGACCCTGTTCATCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VDGGKVVGSSEGRTLGSSSLVQC*GPCSSG Trigger: CCCAGATGAACAGGGTCCCAAGCACTGGACCAAAGA...GCTGGAGCCCAGAGTCCTGCCCTCTGAGGACCCAACTACTTTGCCTCCATCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS GCA 90 bp | GGTGGGGCTTCACTACCACATTCATGTACCCGTAACGATGGTCATTaGACACATGCATCGAGACCCCAGCAGCCTGGCAGGCATAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: GGASLPHSCTRNDGH*THASRPQQPGRHRQ Trigger: TTGCCTATGCCTGCCAGGCTGCTGGGGTCTCGATGCATGTGTGCAATGACCATCGTTACGGGTACATGAATGTGGTAGTGAAGCCCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS CCA 90 bp | CCAGTGCTTCCTGCCTCAGCTCCATCAAAAACTGATGCCGTTCTTTaGTCCAGTGCTTGGGACCCTGTTCATCTGGGTAGGACCTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PVLPASAPSKTDAVL*SSAWDPVHLGRTWP Trigger: AGGCCAGGTCCTACCCAGATGAACAGGGTCCCAAGCACTGGACCAAAGAACGGCATCAGTTTTTGATGGAGCTGAGGCAGGAAGCACTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR CAA 90 bp | CAAGTGGCTTTTATTGAAGGCCTACTGCGTGTTGAGCACCAGGTATGCCTCCCACAGCCCACCTCACCCTaGGTCAGTGTGTGGCCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: QVAFIEGLLRVEHQVCLPQPTSP*VSVWPE Trigger: TTCAGGCCACACACTGACCAAGGGTGAGGTGGGCTG...TGGGAGGCATACCTGGTGCTCAACACGCAGTAGGCCTTCAATAAAAGCCACTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR CAA 90 bp | TCCCTGTCCCTGAGCCCACTGGCTCTAAATTTGCAAGCAGAGTCAAGAGTCTTGAGAGAGTGTTCAGCATaGCGGGCCAGGATGGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLSLSPLALNLQAESRVLRECSA*RARMAR Trigger: CCTTGCCATCCTGGCCCGCAATGCTGAACACTCTCT...CAAGACTCTTGACTCTGCTTGCAAATTTAGAGCCAGTGGGCTCAGGGACAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR CAA 90 bp | TTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCAAGTCCAGCCTGGTGTACAAAGCCACGAAGGGCCTTTaGAGAGCCAGTCTGGCTAAT | + |
|
Preference number: 5 (lower is better) Translates to: LGGRGRRISEFKSSLVYKATKGL*RASLAN Trigger: ATTAGCCAGACTGGCTCTCAAAAGGCCCTTCGTGGC...TTTGTACACCAGGCTGGACTTGAACTCAGAAATCCGCCTGCCTCTGCCTCCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS CCA 90 bp | AGGATACTGCTGTTGAGTGTCCTGCCATCTACAGCATCTACCACCTaGGCAGATATCTCCATCTCCCAGAGAGAGCTCAGCATTCGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RILLLSVLPSTASTT*ADISISQRELSIRA Trigger: GGCTCGAATGCTGAGCTCTCTCTGGGAGATGGAGATATCTGCCCAGGTGGTAGATGCTGTAGATGGCAGGACACTCAACAGCAGTATCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS GCA 90 bp | GTGGAGGTGCTGGAGGATGTCCTGTGTAGCCTCAGGCAAGGTCCATaGCTCTCTGTGCTTCACGTCTGTCCTTCTAATTTTGTGCATTGT | + |
|
Preference number: 5 (lower is better) Translates to: VEVLEDVLCSLRQGP*LSVLHVCPSNFVHC Trigger: ACAATGCACAAAATTAGAAGGACAGACGTGAAGCACAGAGAGGCATGGACCTTGCCTGAGGCTACACAGGACATCCTCCAGCACCTCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134152.2 |
||
| CDS CCA 90 bp | TGGAGGTCCCGAGGCCAGAAGTATGCTTTGTACTGGTCATTTGGGTaGCGATCAAACATGACAGGCAGGAATTCATCCACAGGTAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: WRSRGQKYALYWSFG*RSNMTGRNSSTGSM Trigger: CATGCTACCTGTGGATGAATTCCTGCCTGTCATGTTTGATCGCCACCCAAATGACCAGTACAAAGCATACTTCTGGCCTCGGGACCTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR CAA 90 bp | AAAAGTCTTGGGGGTCTTAGTGTCTTCACTCTGAGACCTTCAGGAGTGGACTCTCTCCGGAAGTTGTCCTaGAAGCGTACGTCATCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KSLGGLSVFTLRPSGVDSLRKLS*KRTSSS Trigger: TGAGGATGACGTACGCTTCAAGGACAACTTCCGGAG...AGAGTCCACTCCTGAAGGTCTCAGAGTGAAGACACTAAGACCCCCAAGACTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR CAA 90 bp | CTCTTCCTCTCCCCTCTCATCGCTCATTTGGATTCCCACTTGGACCTCATGGGCTTGTTAGTAAGAATGTaGTCTGTATCTGCGAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: LFLSPLIAHLDSHLDLMGLLVRM*SVSANR Trigger: CCTGTTCGCAGATACAGACAACATTCTTACTAACAA...GCCCATGAGGTCCAAGTGGGAATCCAAATGAGCGATGAGAGGGGAGAGGAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR CAA 90 bp | CTTCCTCTCCCCTCTCATCGCTCATTTGGATTCCCACTTGGACCTCATGGGCTAAGCTTCAGTGTCTGGTaGTTAGTAAGAATGTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPLPSHRSFGFPLGPHGLSFSVW*LVRMLS Trigger: AGACAACATTCTTACTAACAACCAGACACTGAAGCT...TAGCCCATGAGGTCCAAGTGGGAATCCAAATGAGCGATGAGAGGGGAGAGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS-3UTR CAA 90 bp | AGAAAAGGAAAATCAGATGTAGAGATGTCAACAGCTATGGAGAGAGACAGACAGTCATCAAACCCCATTTaGCTGAGCTTCTTTGGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RKGKSDVEMSTAMERDRQSSNPI*LSFFGG Trigger: GCCCCCAAAGAAGCTCAGCAAAATGGGGTTTGATGA...CTGTCTGTCTCTCTCCATAGCTGTTGACATCTCTACATCTGATTTTCCTTTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS GCA 72 bp | AGCGTCGGCTCTGTGACACTGGCAGCCCGGAGCTGCTaGCCCAACAGGAGCAGCAGAGGTAGGAGCCGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: SVGSVTLAARSC*PNRSSRGRSRA Trigger: TGCGCGGCTCCTACCTCTGCTGCTCCTGTTGGGGCAGCAGCTCCGGGCTGCCAGTGTCACAGAGCCGACGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047521.7 ENSMUST00000134152.2 |
||
| CDS GCA 72 bp | CATCCCTGTGGTGAGGATGGAGGCTGTGTCCACTGCTaGCAGTCAGGTGCAGGTGGGGGCCACGAAGGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: HPCGEDGGCVHC*QSGAGGGHEGP Trigger: AGGCCCTTCGTGGCCCCCACCTGCACCTGACTGGCAGCAGTGGACACAGCCTCCATCCTCACCACAGGGATG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS CAA 90 bp | AGCACGTCCTCCATCAGCCGTTCTAGCCGCCTCCGGAAGTTGTCCTaGAAGCGTACGTCATCCTCAAACACCACGACCCGGGCCAGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: STSSISRSSRLRKLS*KRTSSSNTTTRARP Trigger: GGGCCTGGCCCGGGTCGTGGTGTTTGAGGATGACGTACGCTTCAAGGACAACTTCCGGAGGCGGCTAGAACGGCTGATGGAGGACGTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS TCA 72 bp | TGTCATCGTCCCAGGGGGAGGATGTCTCTGTGTCACTaGGCCACTCGGCGTCTCCCGAATAGTGGGTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: CHRPRGRMSLCH*ATRRLPNSGWG Trigger: CCCCCACCCACTATTCGGGAGACGCCGAGTGGCTCAGTGACACAGAGACATCCTCCCCCTGGGACGATGACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS CAA 72 bp | GCCAGTCAGGTGCAGGTGGGGGCCACGAAGGGCCTTTaGAGAGCCAGTCTGGCTAATGAGGCGACCACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: ASQVQVGATKGL*RASLANEATTV Trigger: GACAGTGGTCGCCTCATTAGCCAGACTGGCTCTCAAAAGGCCCTTCGTGGCCCCCACCTGCACCTGACTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS CAA 90 bp | TCCACTGCTGCCAGTCAGGTGCAGGTGGGGGCCACGAAGGGCCTTTaGAGAGCCAGTCTGGCTAATGAGGCGACCACTGTCATCGTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: STAASQVQVGATKGL*RASLANEATTVIVP Trigger: TGGGACGATGACAGTGGTCGCCTCATTAGCCAGACTGGCTCTCAAAAGGCCCTTCGTGGCCCCCACCTGCACCTGACTGGCAGCAGTGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS GCA 72 bp | AGAGCGATGGGGCAGAGTTGTGCGCTCCAGTGGAGGTaGTGGAGGATGTCCTGTGTAGCCTCAGGCAAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: RAMGQSCALQWR*WRMSCVASGKV Trigger: GACCTTGCCTGAGGCTACACAGGACATCCTCCAGCACCTCCACTGGAGCGCACAACTCTGCCCCATCGCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134152.2 |
||
| CDS GCA 72 bp | CTGTGGTGTTGTCCATGTTGTGATCTGTGGCACACCTaGTCCAGACGCGTCCTGGGGTCCGCCTTCTCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: LWCCPCCDLWHT*SRRVLGSAFSV Trigger: CACGGAGAAGGCGGACCCCAGGACGCGTCTGGAGCAGGTGTGCCACAGATCACAACATGGACAACACCACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154464.8 |
||
| CDS CCA 72 bp | ATCTCCCAGAGAGAGCTCAGCATTCGAGCCCGGCGCTaGGGTCTGCGGGCCAGGCTGATGACAAAGACTTCA | + |
|
Preference number: 6 (lower is better) Translates to: ISQRELSIRARR*GLRARLMTKTS Trigger: TGAAGTCTTTGTCATCAGCCTGGCCCGCAGACCCCAGCGCCGGGCTCGAATGCTGAGCTCTCTCTGGGAGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS TCA 72 bp | CCATCAGCCGTTCTAGCCGCCTCCGGAAGTTGTCCTTaGAGCGTACGTCATCCTCAAACACCACGACCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: PSAVLAASGSCP*SVRHPQTPRPG Trigger: CCCGGGTCGTGGTGTTTGAGGATGACGTACGCTTCAAGGACAACTTCCGGAGGCGGCTAGAACGGCTGATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS CCA 72 bp | CCGTTCTTTGGTCCAGTGCTTGGGACCCTGTTCATCTaGGTAGGACCTGGCCTCCTCCTCAGGCTTCCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: PFFGPVLGTLFI*VGPGLLLRLPD Trigger: GTCTGGAAGCCTGAGGAGGAGGCCAGGTCCTACCCAGATGAACAGGGTCCCAAGCACTGGACCAAAGAACGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047521.7 ENSMUST00000154464.8 |
||
| CDS GCA 72 bp | CAGAATGACTGTCCTGAGAGCGATGGGGCAGAGTTGTaGGCTCCAGTGGAGGTGCTGGAGGATGTCCTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: QNDCPESDGAEL*APVEVLEDVLC Trigger: ACACAGGACATCCTCCAGCACCTCCACTGGAGCGCACAACTCTGCCCCATCGCTCTCAGGACAGTCATTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134152.2 |
||
| CDS CAA 72 bp | TCCATCAGCCGTTCTAGCCGCCTCCGGAAGTTGTCCTaGAAGCGTACGTCATCCTCAAACACCACGACCCGG | + |
|
Preference number: 6 (lower is better) Translates to: SISRSSRLRKLS*KRTSSSNTTTR Trigger: CCGGGTCGTGGTGTTTGAGGATGACGTACGCTTCAAGGACAACTTCCGGAGGCGGCTAGAACGGCTGATGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS CAA 72 bp | ACACAGAATGACTGTCCTGAGAGCGATGGGGCAGAGTaGTGCGCTCCAGTGGAGGTGCTGGAGGATGTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: TQNDCPESDGAE*CAPVEVLEDVL Trigger: CAGGACATCCTCCAGCACCTCCACTGGAGCGCACAACTCTGCCCCATCGCTCTCAGGACAGTCATTCTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134152.2 |
||
| CDS CAA 72 bp | ACGTCCTCCATCAGCCGTTCTAGCCGCCTCCGGAAGTaGTCCTTGAAGCGTACGTCATCCTCAAACACCACG | + |
|
Preference number: 6 (lower is better) Translates to: TSSISRSSRLRK*SLKRTSSSNTT Trigger: CGTGGTGTTTGAGGATGACGTACGCTTCAAGGACAACTTCCGGAGGCGGCTAGAACGGCTGATGGAGGACGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS CAA 72 bp | CATGCCTCTCTGTGCTTCACGTCTGTCCTTCTAATTTaGTGCATTGTACAGAGGGCCAGCCTGGCCCGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: HASLCFTSVLLI*CIVQRASLARG Trigger: CCCCCGGGCCAGGCTGGCCCTCTGTACAATGCACAAAATTAGAAGGACAGACGTGAAGCACAGAGAGGCATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134152.2 |
||
| CDS TCA 72 bp | GTTCACCTGCTTCCGGCCAAGGTAGATCAAGTCCCATaGCAGCTTCTGAATCAGCACGTCCTCCATCAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: VHLLPAKVDQVP*QLLNQHVLHQP Trigger: CGGCTGATGGAGGACGTGCTGATTCAGAAGCTGTCATGGGACTTGATCTACCTTGGCCGGAAGCAGGTGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS GCA 72 bp | TCACTACCACATTCATGTACCCGTAACGATGGTCATTaGACACATGCATCGAGACCCCAGCAGCCTGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SLPHSCTRNDGH*THASRPQQPGR Trigger: CCTGCCAGGCTGCTGGGGTCTCGATGCATGTGTGCAATGACCATCGTTACGGGTACATGAATGTGGTAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS CCA 72 bp | CTGTTGAGTGTCCTGCCATCTACAGCATCTACCACCTaGGCAGATATCTCCATCTCCCAGAGAGAGCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LLSVLPSTASTT*ADISISQRELS Trigger: GCTGAGCTCTCTCTGGGAGATGGAGATATCTGCCCAGGTGGTAGATGCTGTAGATGGCAGGACACTCAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS CAA 72 bp | GAGAAGGCTTGGAGGTCCCGAGGCCAGAAGTATGCTTaGTACTGGTCATTTGGGTGGCGATCAAACATGACA | + |
|
Preference number: 6 (lower is better) Translates to: EKAWRSRGQKYA*YWSFGWRSNMT Trigger: TGTCATGTTTGATCGCCACCCAAATGACCAGTACAAAGCATACTTCTGGCCTCGGGACCTCCAAGCCTTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS TCA 72 bp | AGTATTCAGCCGTGCGGCGATAGTAGCCCTGTGGAGTaGTCCCACACCAAAAGTTGGAATAATAGGTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SIQPCGDSSPVE*SHTKSWNNRSE Trigger: CTCAGACCTATTATTCCAACTTTTGGTGTGGGATCACTCCACAGGGCTACTATCGCCGCACGGCTGAATACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047521.7 |
||
| CDS GCA 72 bp | TCCTGTGTAGCCTCAGGCAAGGTCCATGCCTCTCTGTaGTTCACGTCTGTCCTTCTAATTTTGTGCATTGTA | + |
|
Preference number: 6 (lower is better) Translates to: SCVASGKVHASL*FTSVLLILCIV Trigger: TACAATGCACAAAATTAGAAGGACAGACGTGAAGCACAGAGAGGCATGGACCTTGCCTGAGGCTACACAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134152.2 |
||