Pregenerated sensors for CEP78 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041491Ensembl transcript IDs: ENSMUST00000047704.8, ENSMUST00000235718.2
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAAGGAGAGCCTGTTTTAGCAATGAATCCTGCTGCAGATCCCTCCTaGTGCTCCAGGCCTACAACTCCCAGATGGTCTCTAGACGCTCCC | + |
|
Preference number: 1 (lower is better) Translates to: KGEPVLAMNPAADPS*CSRPTTPRWSLDAP Trigger: GGGAGCGTCTAGAGACCATCTGGGAGTTGTAGGCCTGGAGCAGCAGGAGGGATCTGCAGCAGGATTCATTGCTAAAACAGGCTCTCCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| 3UTR TCA 90 bp | ACGGTGTTCAGAGGTAAAGGAATCAGAGCATCGCTGGTAATCTTCTaGAAACTTCCATACTGCTGTTCATCACCAAGGAAGTCAGGACTG | + |
|
Preference number: 1 (lower is better) Translates to: TVFRGKGIRASLVIF*KLPYCCSSPRKSGL Trigger: CAGTCCTGACTTCCTTGGTGATGAACAGCAGTATGGAAGTTTTCAGAAGATTACCAGCGATGCTCTGATTCCTTTACCTCTGAACACCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| 3UTR TCA 90 bp | TTAGACCTATGTCAGGTTAGGTGTGCTGACGAATGGACACGTTCCTaGAGTTCAAAATCAGATCCAAGAGTATCACTTTCAGAATGTTCT | + |
|
Preference number: 1 (lower is better) Translates to: LDLCQVRCADEWTRS*SSKSDPRVSLSECS Trigger: AGAACATTCTGAAAGTGATACTCTTGGATCTGATTTTGAACTTCAGGAACGTGTCCATTCGTCAGCACACCTAACCTGACATAGGTCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| 3UTR-3UTR GCA 90 bp | CCTTCTATCCCCAGGTCCTTTGCTTTCAGAGTTCCCAGGAGGGTCAGCATCGGAAGCAATGAATCCTGCTaGAGATCCCTCCTGCTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: PSIPRSFAFRVPRRVSIGSNESC*RSLLLL Trigger: GAGCAGCAGGAGGGATCTGCAGCAGGATTCATTGCT...TCCGATGCTGACCCTCCTGGGAACTCTGAAAGCAAAGGACCTGGGGATAGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| 3UTR-3UTR TCA 90 bp | GAAGGCAAAAATCATAATTTCAAAAGGTTAGACCTATGTCAGGTTAGGTGTGCTTCGCTGGTAATCTTCTaGAAACTTCCATACTGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: EGKNHNFKRLDLCQVRCASLVIF*KLPYCC Trigger: ACAGCAGTATGGAAGTTTTCAGAAGATTACCAGCGA...AGCACACCTAACCTGACATAGGTCTAACCTTTTGAAATTATGATTTTTGCCTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| 3UTR CAA 90 bp | TCAAAATCAGATCCAAGAGTATCACTTTCAGAATGTTCTAGAAGGTaGGGTTTACTTTTGATAGTCTTAGATGAGACAGTCACTATTCTG | + |
|
Preference number: 2 (lower is better) Translates to: SKSDPRVSLSECSRR*GLLLIVLDETVTIL Trigger: CAGAATAGTGACTGTCTCATCTAAGACTATCAAAAGTAAACCCAACCTTCTAGAACATTCTGAAAGTGATACTCTTGGATCTGATTTTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| 3UTR GCA 72 bp | GCCTACAACTCCCAGATGGTCTCTAGACGCTCCCACTaGCTCTTGTGCAGAAGCCGGATCCTGGACGGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: AYNSQMVSRRSH*LLCRSRILDGV Trigger: AACACCGTCCAGGATCCGGCTTCTGCACAAGAGGCAGTGGGAGCGTCTAGAGACCATCTGGGAGTTGTAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| 3UTR CCA 72 bp | GATCCCTCCTGCTGCTCCAGGCCTACAACTCCCAGATaGTCTCTAGACGCTCCCACTGCCTCTTGTGCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: DPSCCSRPTTPR*SLDAPTASCAE Trigger: TTCTGCACAAGAGGCAGTGGGAGCGTCTAGAGACCATCTGGGAGTTGTAGGCCTGGAGCAGCAGGAGGGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| 3UTR CCA 72 bp | GACGCTCCCACTGCCTCTTGTGCAGAAGCCGGATCCTaGACGGTGTTCAGAGGTAAAGGAATCAGAGCATCG | + |
|
Preference number: 3 (lower is better) Translates to: DAPTASCAEAGS*TVFRGKGIRAS Trigger: CGATGCTCTGATTCCTTTACCTCTGAACACCGTCCAGGATCCGGCTTCTGCACAAGAGGCAGTGGGAGCGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| 3UTR TCA 72 bp | CCTTCTGGAGGGCTCACTTGCCGTGCTCCCCTTCTCTaGAGAAGACCTGCTGTGTTTAGACAACACCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: PSGGLTCRAPLL*RRPAVFRQHLL Trigger: GAGGAGGTGTTGTCTAAACACAGCAGGTCTTCTTCAGAGAAGGGGAGCACGGCAAGTGAGCCCTCCAGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| 3UTR GCA 72 bp | CCTGTTTTAGCAATGAATCCTGCTGCAGATCCCTCCTaGTGCTCCAGGCCTACAACTCCCAGATGGTCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: PVLAMNPAADPS*CSRPTTPRWSL Trigger: TAGAGACCATCTGGGAGTTGTAGGCCTGGAGCAGCAGGAGGGATCTGCAGCAGGATTCATTGCTAAAACAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| 3UTR TCA 72 bp | AGAGGTAAAGGAATCAGAGCATCGCTGGTAATCTTCTaGAAACTTCCATACTGCTGTTCATCACCAAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: RGKGIRASLVIF*KLPYCCSSPRK Trigger: CTTCCTTGGTGATGAACAGCAGTATGGAAGTTTTCAGAAGATTACCAGCGATGCTCTGATTCCTTTACCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| 3UTR TCA 72 bp | TGTCAGGTTAGGTGTGCTGACGAATGGACACGTTCCTaGAGTTCAAAATCAGATCCAAGAGTATCACTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: CQVRCADEWTRS*SSKSDPRVSLS Trigger: TGAAAGTGATACTCTTGGATCTGATTTTGAACTTCAGGAACGTGTCCATTCGTCAGCACACCTAACCTGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS-3UTR GCA 90 bp | CCTGTTTTAGCAATGAATCCTGCTGCAGATCCCTCCTGCTGCTCCAGGCCTACAAGCGGCACGGAGTCCTaGAGCGCGCACAGGTACTCG | + |
|
Preference number: 4 (lower is better) Translates to: PVLAMNPAADPSCCSRPTSGTES*SAHRYS Trigger: CGAGTACCTGTGCGCGCTGCAGGACTCCGTGCCGCT...TGTAGGCCTGGAGCAGCAGGAGGGATCTGCAGCAGGATTCATTGCTAAAACAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS-3UTR GCA 90 bp | GAATCCTGCTGCAGATCCCTCCTGCTGCTCCAGGCCTACAACTCCCAGATGGTCCTCTCCTCCTTCAGCTaGCTTAGGCACTCCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ESCCRSLLLLQAYNSQMVLSSFS*LRHSSS Trigger: GCTGGAGGAGTGCCTAAGGCAGCTGAAGGAGGAGAG...GACCATCTGGGAGTTGTAGGCCTGGAGCAGCAGGAGGGATCTGCAGCAGGATTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| 3UTR CAA 72 bp | AACTCCCAGATGGTCTCTAGACGCTCCCACTGCCTCTaGTGCAGAAGCCGGATCCTGGACGGTGTTCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NSQMVSRRSHCL*CRSRILDGVQR Trigger: CCTCTGAACACCGTCCAGGATCCGGCTTCTGCACAAGAGGCAGTGGGAGCGTCTAGAGACCATCTGGGAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS-3UTR CCA 90 bp | GAATCCTGCTGCAGATCCCTCCTGCTGCTCCAGGCCTACAACTCCCAGATGGTCCTGGAGGCAGAGGGTTaGGAGCATAGCAGTCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: ESCCRSLLLLQAYNSQMVLEAEG*EHSSLY Trigger: GTAAAGACTGCTATGCTCCCAACCCTCTGCCTCCAG...GACCATCTGGGAGTTGTAGGCCTGGAGCAGCAGGAGGGATCTGCAGCAGGATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS-3UTR TCA 90 bp | CCTTCTATCCCCAGGTCCTTTGCTTTCAGAGTTCCCAGGAGGGTCAGCATCGGAGTCAAGGACTGTGCATaGAGGGCTTCAGACAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PSIPRSFAFRVPRRVSIGVKDCA*RASDRE Trigger: CTCCCTGTCTGAAGCCCTTCATGCACAGTCCTTGAC...TCCGATGCTGACCCTCCTGGGAACTCTGAAAGCAAAGGACCTGGGGATAGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS-3UTR CCA 90 bp | GAATCCTGCTGCAGATCCCTCCTGCTGCTCCAGGCCTACAACTCCCAGATGGTCAAGGCACTTGCACCCTaGTCACCAATGAGTGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ESCCRSLLLLQAYNSQMVKALAP*SPMSVL Trigger: CAACACACTCATTGGTGACCAGGGTGCAAGTGCCTT...GACCATCTGGGAGTTGTAGGCCTGGAGCAGCAGGAGGGATCTGCAGCAGGATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS-3UTR TCA 90 bp | CAGAGCATCGCTGGTAATCTTCTGAAAACTTCCATACTGCTGTTCATCACCAAGGCAGCCGGTCGGCATTaGAGTCCAGCACGCCGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QSIAGNLLKTSILLFITKAAGRH*SPARRP Trigger: GGGACGGCGTGCTGGACTTCAATGCCGACCGGCTGC...CTTGGTGATGAACAGCAGTATGGAAGTTTTCAGAAGATTACCAGCGATGCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS-3UTR GCA 90 bp | CTCAAGCAGGTCAGGAAGCAGGAGACTTCCATACTGCTGTTCATCACCAAGGAAGCCGTAAGCCAGCCATaGAGTCCAGATCGGGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LKQVRKQETSILLFITKEAVSQP*SPDRVS Trigger: GGAGACCCGATCTGGACTGCATGGCTGGCTTACGGC...TTCCTTGGTGATGAACAGCAGTATGGAAGTCTCCTGCTTCCTGACCTGCTTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS-3UTR CCA 90 bp | AAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGGAAGCAGGAGACTTCCATACTGAAACCAGATGCGCCTaGAGGCAGAGGGTTGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KEVRTGTQAGQEAGDFHTETRCA*RQRVGS Trigger: GCTCCCAACCCTCTGCCTCCAGGCGCATCTGGTTTC...AGTATGGAAGTCTCCTGCTTCCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| 3UTR CAA 72 bp | GGCTCATTAAGCAGAGACCTTCTATCCCCAGGTCCTTaGCTTTCAGAGTTCCCAGGAGGGTCAGCATCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GSLSRDLLSPGP*LSEFPGGSASD Trigger: GTCCGATGCTGACCCTCCTGGGAACTCTGAAAGCAAAGGACCTGGGGATAGAAGGTCTCTGCTTAATGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS-3UTR GCA 90 bp | TCAGGACTGGAACTCAAGCAGGTCAGGAAGCAGGAGACTTCCATACTGCTGTTCAGGCAAGAAACCAGATaGGCCTGGAGGCAGAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SGLELKQVRKQETSILLFRQETR*AWRQRV Trigger: AACCCTCTGCCTCCAGGCGCATCTGGTTTCTTGCCT...GAACAGCAGTATGGAAGTCTCCTGCTTCCTGACCTGCTTGAGTTCCAGTCCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS-3UTR TCA 90 bp | ATCCTGCTGCAGATCCCTCCTGCTGCTCCAGGCCTACAACTCCCAGATGGTCTCTGCCTTCTCATGGTTTaGTACTTTAAGATCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ILLQIPPAAPGLQLPDGLCLLMV*YFKILA Trigger: GGCCAAGATCTTAAAGTATCAAACCATGAGAAGGCA...GAGACCATCTGGGAGTTGTAGGCCTGGAGCAGCAGGAGGGATCTGCAGCAGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS-3UTR TCA 90 bp | CTCAAGCAGGTCAGGAAGCAGGAGACTTCCATACTGCTGTTCATCACCAAGGAATGTTGCAGTTCAGTGTaGTGCGCCGTAAGCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LKQVRKQETSILLFITKECCSSV*CAVSQP Trigger: TGGCTGGCTTACGGCGCATCACACTGAACTGCAACA...TTCCTTGGTGATGAACAGCAGTATGGAAGTCTCCTGCTTCCTGACCTGCTTGAG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS-3UTR GCA 90 bp | GGTGTGCTGACGAATGGACACGTTCCTGAAGTTCAAAATCAGATCCAAGAGTATCTGGTGAGGCCGCACTaGTGCAGGTCGAGTGCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: GVLTNGHVPEVQNQIQEYLVRPH*CRSSAR Trigger: TCGAGCACTCGACCTGCAGCAGTGCGGCCTCACCAG...ATACTCTTGGATCTGATTTTGAACTTCAGGAACGTGTCCATTCGTCAGCACACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS-3UTR GCA 90 bp | ATCCTGCTGCAGATCCCTCCTGCTGCTCCAGGCCTACAACTCCCAGATGGTCTCGAAAAGAATTCTCGATaGTGCCCAAGACTCCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ILLQIPPAAPGLQLPDGLEKNSR*CPRLLH Trigger: ATGAAGGAGTCTTGGGCAGCATCGAGAATTCTTTTC...GAGACCATCTGGGAGTTGTAGGCCTGGAGCAGCAGGAGGGATCTGCAGCAGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS-3UTR GCA 90 bp | CCTGTTTTAGCAATGAATCCTGCTGCAGATCCCTCCTGCTGCTCCAGGCCTACAACTCCTGCTTCTTTTTaGACGTTCTGCTGTTCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PVLAMNPAADPSCCSRPTTPASF*TFCCSP Trigger: TGGCGAACAGCAGAACGTGCAAAAAGAAGCAGGAGT...TGTAGGCCTGGAGCAGCAGGAGGGATCTGCAGCAGGATTCATTGCTAAAACAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS-3UTR GCA 90 bp | CCTGTTTTAGCAATGAATCCTGCTGCAGATCCCTCCTGCTGCTCCAGGCCTACATCTTTTTGCACGTTCTaGTGTTCGCCAAGGCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PVLAMNPAADPSCCSRPTSFCTF*CSPRQE Trigger: TTCTTGCCTTGGCGAACAGCAGAACGTGCAAAAAGA...TGTAGGCCTGGAGCAGCAGGAGGGATCTGCAGCAGGATTCATTGCTAAAACAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS-3UTR GCA 90 bp | CCATACTGCTGTTCATCACCAAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGGGTTTGTCAAGGACTGTaGATGAAGGGCTTCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: PYCCSSPRKSGLELKQVRVCQGL*MKGFRQ Trigger: CTGTCTGAAGCCCTTCATGCACAGTCCTTGACAAAC...CCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTGGTGATGAACAGCAGTATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS-3UTR TCA 90 bp | TTTAGACAACACCTCCTCTTCTCTTTGACTCCTGCCTCCAGGAATGCCACCTGCGTGCACCAAAGAGGTTaGTTTACTCAGTCCCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FRQHLLFSLTPASRNATCVHQRG*FTQSLC Trigger: ACAAAGGGACTGAGTAAATCAACCTCTTTGGTGCAC...GCAGGTGGCATTCCTGGAGGCAGGAGTCAAAGAGAAGAGGAGGTGTTGTCTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS-3UTR TCA 90 bp | CCATACTGCTGTTCATCACCAAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGGTTCCTGGACACTTTCTaGAGAATCTTCAGTCTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: PYCCSSPRKSGLELKQVRFLDTF*RIFSLV Trigger: GACGAGACTGAAGATTCTTCAGAAAGTGTCCAGGAA...CCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTGGTGATGAACAGCAGTATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS-3UTR GCA 90 bp | TTTAGACAACACCTCCTCTTCTCTTTGACTCCTGCCTCCAGGAATGCCACCTGCACCAATTCTAATGGTTaGTTTTCCCTTCCGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FRQHLLFSLTPASRNATCTNSNG*FSLPAA Trigger: AGCAGCCGGAAGGGAAAAGCAACCATTAGAATTGGT...GCAGGTGGCATTCCTGGAGGCAGGAGTCAAAGAGAAGAGGAGGTGTTGTCTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS-3UTR CCA 90 bp | CCTTCTATCCCCAGGTCCTTTGCTTTCAGAGTTCCCAGGAGGGTCAGCATCGGATTTCTTCTTTTATGCTaGTTTTCTGAGGCGCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PSIPRSFAFRVPRRVSIGFLLLC*FSEALP Trigger: AGGAAGCGCCTCAGAAAACCAGCATAAAAGAAGAAA...TCCGATGCTGACCCTCCTGGGAACTCTGAAAGCAAAGGACCTGGGGATAGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS-3UTR TCA 90 bp | GGTGTGCTGACGAATGGACACGTTCCTGAAGTTCAAAATCAGATCCAAGAGTATCACCCTGGTCACCAATaGGTGTGTTGCAGTTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GVLTNGHVPEVQNQIQEYHPGHQ*VCCSSV Trigger: CACTGAACTGCAACACACTCATTGGTGACCAGGGTG...ATACTCTTGGATCTGATTTTGAACTTCAGGAACGTGTCCATTCGTCAGCACACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS-3UTR CCA 90 bp | AAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGGAAGCAGGAGACTTCCATACTGGAAGCTTATGTCTTTaGATCTCACTGCAGGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: KEVRTGTQAGQEAGDFHTGSLCL*ISLQEL Trigger: GAGTTCCTGCAGTGAGATCCAAAGACATAAGCTTCC...AGTATGGAAGTCTCCTGCTTCCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS-3UTR CCA 90 bp | AAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGGAAGCAGGAGACTTCCATACTGCACTCCTTCCGTTCTaGAGGACCTTTTTGATAACT | + |
|
Preference number: 4 (lower is better) Translates to: KEVRTGTQAGQEAGDFHTALLPF*RTFLIT Trigger: AGTTATCAAAAAGGTCCTCCAGAACGGAAGGAGTGC...AGTATGGAAGTCTCCTGCTTCCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS-3UTR GCA 90 bp | TGCTGTTCATCACCAAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGGAAGCAGTCCAATTGGACAATTTaGAAGAGACAAGTGCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: CCSSPRKSGLELKQVRKQSNWTI*KRQVHQ Trigger: TTGGTGCACTTGTCTCTTGCAAATTGTCCAATTGGA...CTGCTTCCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTGGTGATGAACAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS-3UTR GCA 90 bp | CTCAAGCAGGTCAGGAAGCAGGAGACTTCCATACTGCTGTTCATCACCAAGGAAGCAGTCTGTTTCGGATaGAGAGTTTCATCTTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LKQVRKQETSILLFITKEAVCFG*RVSSSS Trigger: ACTTGAAGATGAAACTCTGCATCCGAAACAGACTGC...TTCCTTGGTGATGAACAGCAGTATGGAAGTCTCCTGCTTCCTGACCTGCTTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS-3UTR GCA 90 bp | TTTAGACAACACCTCCTCTTCTCTTTGACTCCTGCCTCCAGGAATGCCACCTGCTTAATGAAGAACTCCTaGTTCTTTTTGCACGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FRQHLLFSLTPASRNATCLMKNS*FFLHVL Trigger: CAGAACGTGCAAAAAGAAGCAGGAGTTCTTCATTAA...GCAGGTGGCATTCCTGGAGGCAGGAGTCAAAGAGAAGAGGAGGTGTTGTCTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS-3UTR GCA 90 bp | CTCAAGCAGGTCAGGAAGCAGGAGACTTCCATACTGCTGTTCATCACCAAGGAAATTGTTTTCTTTCTCTaGTTAGCGGTTTTAGACGGT | + |
|
Preference number: 4 (lower is better) Translates to: LKQVRKQETSILLFITKEIVFFL*LAVLDG Trigger: ACCGTCTAAAACCGCTAAGCAGAGAAAGAAAACAAT...TTCCTTGGTGATGAACAGCAGTATGGAAGTCTCCTGCTTCCTGACCTGCTTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS-3UTR GCA 90 bp | GAAGGCAAAAATCATAATTTCAAAAGGTTAGACCTATGTCAGGTTAGGTGTGCTGTCTGCAAAGGCACTTaGACCCTGGTCACCAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: EGKNHNFKRLDLCQVRCAVCKGT*TLVTNE Trigger: CTCATTGGTGACCAGGGTGCAAGTGCCTTTGCAGAC...AGCACACCTAACCTGACATAGGTCTAACCTTTTGAAATTATGATTTTTGCCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGCATCGCTGGTAATCTTCTGAAAACTTCCATACTGCTGTTCATCACCAAGTTTATATTTCTTAGCTaGGCATTTTCATGTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QSIAGNLLKTSILLFITKFIFLS*AFSCSS Trigger: GCTGGAACATGAAAATGCCCAGCTAAGAAATATAAA...CTTGGTGATGAACAGCAGTATGGAAGTTTTCAGAAGATTACCAGCGATGCTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS CCA 90 bp | GTATCAGCACCTCCGGACCGCAGAACTGTTTCCCCGAGCCACGGCTaGAAGGAGCTCTTGATGGCCACCAGCGGCAGGTCGCGGTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: VSAPPDRRTVSPSHG*KELLMATSGRSRFT Trigger: GGTGAACCGCGACCTGCCGCTGGTGGCCATCAAGAGCTCCTTCCAGCCGTGGCTCGGGGAAACAGTTCTGCGGTCCGGAGGTGCTGATAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047704.8 ENSMUST00000235718.2 |
||
| CDS GCA 90 bp | AGGGCCTCCAGTAAAGCCTTGGCCCCTTCACTGGTGAGGCCGCACTaGTGCAGGTCGAGTGCTCGAAGCCACAGGTCCTCACTAAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RASSKALAPSLVRPH*CRSSARSHRSSLRE Trigger: CTCTCTTAGTGAGGACCTGTGGCTTCGAGCACTCGACCTGCAGCAGTGCGGCCTCACCAGTGAAGGGGCCAAGGCTTTACTGGAGGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047704.8 ENSMUST00000235718.2 |
||
| CDS GCA 90 bp | GCCTCCAGTAAAGCCTTGGCCCCTTCACTGGTGAGGCCGCACTGCTaGAGGTCGAGTGCTCGAAGCCACAGGTCCTCACTAAGAGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: ASSKALAPSLVRPHC*RSSARSHRSSLRES Trigger: AGACTCTCTTAGTGAGGACCTGTGGCTTCGAGCACTCGACCTGCAGCAGTGCGGCCTCACCAGTGAAGGGGCCAAGGCTTTACTGGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047704.8 ENSMUST00000235718.2 |
||
| CDS-3UTR CAA 90 bp | TTTAGACAACACCTCCTCTTCTCTTTGACTCCTGCCTCCAGGAATGCCACCTGCCGCAGCCGGTCGGCATaGAAGTCCAGCACGCCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: FRQHLLFSLTPASRNATCRSRSA*KSSTPS Trigger: GGACGGCGTGCTGGACTTCAATGCCGACCGGCTGCG...GCAGGTGGCATTCCTGGAGGCAGGAGTCAAAGAGAAGAGGAGGTGTTGTCTAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS CCA 90 bp | CTGTTCGCCAAGGCAAGAAACCAGATGCGCCTGGAGGCAGAGGGTTaGGAGCATAGCAGTCTTTACCGAGCCCCTGTTTTCTCCCATTAC | + |
|
Preference number: 5 (lower is better) Translates to: LFAKARNQMRLEAEG*EHSSLYRAPVFSHY Trigger: GTAATGGGAGAAAACAGGGGCTCGGTAAAGACTGCTATGCTCCCAACCCTCTGCCTCCAGGCGCATCTGGTTTCTTGCCTTGGCGAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047704.8 ENSMUST00000235718.2 |
||
| CDS GCA 90 bp | CTGCAGGTCGAGTGCTCGAAGCCACAGGTCCTCACTAAGAGAGTCTaGAAAGGCACTTGCACCCTGGTCACCAATGAGTGTGTTGCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LQVECSKPQVLTKRV*KGTCTLVTNECVAV Trigger: AACTGCAACACACTCATTGGTGACCAGGGTGCAAGTGCCTTTGCAGACTCTCTTAGTGAGGACCTGTGGCTTCGAGCACTCGACCTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047704.8 ENSMUST00000235718.2 |
||
| CDS GCA 90 bp | GCTTCTTTTTGCACGTTCTGCTGTTCGCCAAGGCAAGAAACCAGATaGGCCTGGAGGCAGAGGGTTGGGAGCATAGCAGTCTTTACCGAG | + |
|
Preference number: 5 (lower is better) Translates to: ASFCTFCCSPRQETR*AWRQRVGSIAVFTE Trigger: CTCGGTAAAGACTGCTATGCTCCCAACCCTCTGCCTCCAGGCGCATCTGGTTTCTTGCCTTGGCGAACAGCAGAACGTGCAAAAAGAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047704.8 ENSMUST00000235718.2 |
||
| CDS-3UTR CAA 90 bp | GTCAGGACTGGAACTCAAGCAGGTCAGGAAGCAGGAGACTTCCATACTGCTGTTACGACCAGGGTTCTGTaGGTTTCCAGGGCCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: VRTGTQAGQEAGDFHTAVTTRVL*VSRASS Trigger: ACTGGAGGCCCTGGAAACCAACAGAACCCTGGTCGT...AACAGCAGTATGGAAGTCTCCTGCTTCCTGACCTGCTTGAGTTCCAGTCCTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS-3UTR CAA 90 bp | GCTCCCACTGCCTCTTGTGCAGAAGCCGGATCCTGGACGGTGTTCAGAGGTAAAAACTCCTGCTTCTTTTaGCACGTTCTGCTGTTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: APTASCAEAGSWTVFRGKNSCFF*HVLLFA Trigger: GGCGAACAGCAGAACGTGCAAAAAGAAGCAGGAGTT...TTTACCTCTGAACACCGTCCAGGATCCGGCTTCTGCACAAGAGGCAGTGGGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS-3UTR CAA 90 bp | ATCCTGCTGCAGATCCCTCCTGCTGCTCCAGGCCTACAACTCCCAGATGGTCTCCGTCCAGGATCATGTTaGTCAAGGACTGTGCATGAA | + |
|
Preference number: 5 (lower is better) Translates to: ILLQIPPAAPGLQLPDGLRPGSC*SRTVHE Trigger: TTCATGCACAGTCCTTGACAAACATGATCCTGGACG...GAGACCATCTGGGAGTTGTAGGCCTGGAGCAGCAGGAGGGATCTGCAGCAGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS GCA 90 bp | TGCTCGAAGCCACAGGTCCTCACTAAGAGAGTCTGCAAAGGCACTTaGACCCTGGTCACCAATGAGTGTGTTGCAGTTCAGTGTGATGCG | + |
|
Preference number: 5 (lower is better) Translates to: CSKPQVLTKRVCKGT*TLVTNECVAVQCDA Trigger: CGCATCACACTGAACTGCAACACACTCATTGGTGACCAGGGTGCAAGTGCCTTTGCAGACTCTCTTAGTGAGGACCTGTGGCTTCGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047704.8 ENSMUST00000235718.2 |
||
| CDS CCA 90 bp | AGCCACAGGTCCTCACTAAGAGAGTCTGCAAAGGCACTTGCACCCTaGTCACCAATGAGTGTGTTGCAGTTCAGTGTGATGCGCCGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: SHRSSLRESAKALAP*SPMSVLQFSVMRRK Trigger: CTTACGGCGCATCACACTGAACTGCAACACACTCATTGGTGACCAGGGTGCAAGTGCCTTTGCAGACTCTCTTAGTGAGGACCTGTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047704.8 ENSMUST00000235718.2 |
||
| CDS-3UTR CAA 90 bp | CAGAGCATCGCTGGTAATCTTCTGAAAACTTCCATACTGCTGTTCATCACCAAGGGCTGGAAGGAGCTCTaGATGGCCACCAGCGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QSIAGNLLKTSILLFITKGWKEL*MATSGR Trigger: CCTGCCGCTGGTGGCCATCAAGAGCTCCTTCCAGCC...CTTGGTGATGAACAGCAGTATGGAAGTTTTCAGAAGATTACCAGCGATGCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS-3UTR CAA 90 bp | CCTGCTGCAGATCCCTCCTGCTGCTCCAGGCCTACAACTCCCAGATGGTCTCTATTACACCCTGTAAAGTaGACGGTCTTGAGAGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: PAADPSCCSRPTTPRWSLLHPVK*TVLRVT Trigger: TGTCACTCTCAAGACCGTCAACTTTACAGGGTGTAA...TAGAGACCATCTGGGAGTTGTAGGCCTGGAGCAGCAGGAGGGATCTGCAGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS CCA 90 bp | CAAGCAGGTCAGGAAGCAGGAGTCGGATATCCTGCATTTGTCCGGTaGCAGTCTGTTTCGGATGCAGAGTTTCATCTTCAAGTGCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QAGQEAGVGYPAFVR*QSVSDAEFHLQVPS Trigger: AGAAGGCACTTGAAGATGAAACTCTGCATCCGAAACAGACTGCCACCGGACAAATGCAGGATATCCGACTCCTGCTTCCTGACCTGCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS-3UTR CAA 90 bp | TTTAGACAACACCTCCTCTTCTCTTTGACTCCTGCCTCCAGGAATGCCACCTGCTCACCAATGAGTGTGTaGCAGTTCAGTGTGATGCGC | + |
|
Preference number: 5 (lower is better) Translates to: FRQHLLFSLTPASRNATCSPMSV*QFSVMR Trigger: GCGCATCACACTGAACTGCAACACACTCATTGGTGA...GCAGGTGGCATTCCTGGAGGCAGGAGTCAAAGAGAAGAGGAGGTGTTGTCTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS-3UTR CAA 90 bp | CCTTCTATCCCCAGGTCCTTTGCTTTCAGAGTTCCCAGGAGGGTCAGCATCGGAAACCTCCATCTCCAATaGGACAATTTGCAAGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: PSIPRSFAFRVPRRVSIGNLHLQ*DNLQET Trigger: TGTCTCTTGCAAATTGTCCAATTGGAGATGGAGGTT...TCCGATGCTGACCCTCCTGGGAACTCTGAAAGCAAAGGACCTGGGGATAGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS-3UTR CAA 90 bp | CAAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGGAAGCAGGAGACTTCCATACTGGAAGCTTATGTCTTaGGATCTCACTGCAGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: QGSQDWNSSRSGSRRLPYWKLMS*DLTAGT Trigger: AGTTCCTGCAGTGAGATCCAAAGACATAAGCTTCCA...GTATGGAAGTCTCCTGCTTCCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS GCA 90 bp | AGGAGTCGGATATCCTGCATTTGTCCGGTGGCAGTCTGTTTCGGATaGAGAGTTTCATCTTCAAGTGCCTTCTGTTCTTGTATAGGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: RSRISCICPVAVCFG*RVSSSSAFCSCIGV Trigger: TACACCTATACAAGAACAGAAGGCACTTGAAGATGAAACTCTGCATCCGAAACAGACTGCCACCGGACAAATGCAGGATATCCGACTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS-3UTR CAA 90 bp | TCAGGACTGGAACTCAAGCAGGTCAGGAAGCAGGAGACTTCCATACTGCTGTTCGATAGATCACGAGTTTaGATTAATGAAGAACTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SGLELKQVRKQETSILLFDRSRV*INEELL Trigger: CAGGAGTTCTTCATTAATCAAAACTCGTGATCTATC...GAACAGCAGTATGGAAGTCTCCTGCTTCCTGACCTGCTTGAGTTCCAGTCCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS GCA 90 bp | TTGTCCGGTGGCAGTCTGTTTCGGATGCAGAGTTTCATCTTCAAGTaGCTTCTGTTCTTGTATAGGTGTATTAACCGTGGAATTCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: LSGGSLFRMQSFIFK*LLFLYRCINRGIHL Trigger: CAGATGAATTCCACGGTTAATACACCTATACAAGAACAGAAGGCACTTGAAGATGAAACTCTGCATCCGAAACAGACTGCCACCGGACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047704.8 ENSMUST00000235718.2 |
||
| CDS-3UTR CAA 90 bp | CAGAGCATCGCTGGTAATCTTCTGAAAACTTCCATACTGCTGTTCATCACCAAGAGTGCACCAAAGAGGTaGATTTACTCAGTCCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: QSIAGNLLKTSILLFITKSAPKR*IYSVPL Trigger: CAAAGGGACTGAGTAAATCAACCTCTTTGGTGCACT...CTTGGTGATGAACAGCAGTATGGAAGTTTTCAGAAGATTACCAGCGATGCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS TCA 90 bp | CCGGGAAATCTGATTTCTTCAGGTGATTTGATAGATCACGAGTTTTaGTTAATGAAGAACTCCTGCTTCTTTTTGCACGTTCTGCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PGNLISSGDLIDHEF*LMKNSCFFLHVLLF Trigger: GAACAGCAGAACGTGCAAAAAGAAGCAGGAGTTCTTCATTAATCAAAACTCGTGATCTATCAAATCACCTGAAGAAATCAGATTTCCCGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047704.8 ENSMUST00000235718.2 |
||
| CDS TCA 72 bp | GCGGTGCCCAGTCCACCGCGCGCAGCCGGTCGGCATTaGAGTCCAGCACGCCGTCCCGCAGGCAGGCGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: AVPSPPRAAGRH*SPARRPAGRRA Trigger: TGCGCGCCTGCCTGCGGGACGGCGTGCTGGACTTCAATGCCGACCGGCTGCGCGCGGTGGACTGGGCACCGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047704.8 ENSMUST00000235718.2 |
||
| CDS CAA 72 bp | AGCGGTGCCCAGTCCACCGCGCGCAGCCGGTCGGCATaGAAGTCCAGCACGCCGTCCCGCAGGCAGGCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: SGAQSTARSRSA*KSSTPSRRQAR Trigger: GCGCGCCTGCCTGCGGGACGGCGTGCTGGACTTCAATGCCGACCGGCTGCGCGCGGTGGACTGGGCACCGCT 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047704.8 ENSMUST00000235718.2 |
||
| CDS CCA 72 bp | CCTCCGGACCGCAGAACTGTTTCCCCGAGCCACGGCTaGAAGGAGCTCTTGATGGCCACCAGCGGCAGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: PPDRRTVSPSHG*KELLMATSGRS Trigger: CGACCTGCCGCTGGTGGCCATCAAGAGCTCCTTCCAGCCGTGGCTCGGGGAAACAGTTCTGCGGTCCGGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047704.8 ENSMUST00000235718.2 |
||
| CDS GCA 72 bp | CCCTTCACTGGTGAGGCCGCACTGCTGCAGGTCGAGTaGTCGAAGCCACAGGTCCTCACTAAGAGAGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PFTGEAALLQVE*SKPQVLTKRVC Trigger: GCAGACTCTCTTAGTGAGGACCTGTGGCTTCGAGCACTCGACCTGCAGCAGTGCGGCCTCACCAGTGAAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047704.8 ENSMUST00000235718.2 |
||
| CDS GCA 72 bp | AAAGCCTTGGCCCCTTCACTGGTGAGGCCGCACTGCTaGAGGTCGAGTGCTCGAAGCCACAGGTCCTCACTA | + |
|
Preference number: 6 (lower is better) Translates to: KALAPSLVRPHC*RSSARSHRSSL Trigger: TAGTGAGGACCTGTGGCTTCGAGCACTCGACCTGCAGCAGTGCGGCCTCACCAGTGAAGGGGCCAAGGCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047704.8 ENSMUST00000235718.2 |
||
| CDS GCA 72 bp | AGTAAAGCCTTGGCCCCTTCACTGGTGAGGCCGCACTaGTGCAGGTCGAGTGCTCGAAGCCACAGGTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SKALAPSLVRPH*CRSSARSHRSS Trigger: TGAGGACCTGTGGCTTCGAGCACTCGACCTGCAGCAGTGCGGCCTCACCAGTGAAGGGGCCAAGGCTTTACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047704.8 ENSMUST00000235718.2 |
||
| CDS CAA 90 bp | AGAACGACCAGGGTTCTGTTGGTTTCCAGGGCCTCCAGTAAAGCCTaGGCCCCTTCACTGGTGAGGCCGCACTGCTGCAGGTCGAGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: RTTRVLLVSRASSKA*APSLVRPHCCRSSA Trigger: AGCACTCGACCTGCAGCAGTGCGGCCTCACCAGTGAAGGGGCCAAGGCTTTACTGGAGGCCCTGGAAACCAACAGAACCCTGGTCGTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047704.8 ENSMUST00000235718.2 |
||
| CDS CAA 90 bp | AGCTGGGCATTTTCATGTTCCAGCTCACTGACGCGCTTGTCGGCCTaGAGGCGGATCACTCTCTCCTCCTTCAGCTGCCTTAGGCACTCC | + |
|
Preference number: 6 (lower is better) Translates to: SWAFSCSSSLTRLSA*RRITLSSFSCLRHS Trigger: GGAGTGCCTAAGGCAGCTGAAGGAGGAGAGAGTGATCCGCCTCAAGGCCGACAAGCGCGTCAGTGAGCTGGAACATGAAAATGCCCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047704.8 ENSMUST00000235718.2 |
||
| CDS GCA 72 bp | TGCACGTTCTGCTGTTCGCCAAGGCAAGAAACCAGATaGGCCTGGAGGCAGAGGGTTGGGAGCATAGCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: CTFCCSPRQETR*AWRQRVGSIAV Trigger: GACTGCTATGCTCCCAACCCTCTGCCTCCAGGCGCATCTGGTTTCTTGCCTTGGCGAACAGCAGAACGTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047704.8 ENSMUST00000235718.2 |
||
| CDS CAA 72 bp | AGCTGGGCATTTTCATGTTCCAGCTCACTGACGCGCTaGTCGGCCTTGAGGCGGATCACTCTCTCCTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SWAFSCSSSLTR*SALRRITLSSF Trigger: GAAGGAGGAGAGAGTGATCCGCCTCAAGGCCGACAAGCGCGTCAGTGAGCTGGAACATGAAAATGCCCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047704.8 ENSMUST00000235718.2 |
||
| CDS CAA 72 bp | GCAAAGGCACTTGCACCCTGGTCACCAATGAGTGTGTaGCAGTTCAGTGTGATGCGCCGTAAGCCAGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: AKALAPWSPMSV*QFSVMRRKPAM Trigger: CATGGCTGGCTTACGGCGCATCACACTGAACTGCAACACACTCATTGGTGACCAGGGTGCAAGTGCCTTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047704.8 ENSMUST00000235718.2 |
||
| CDS CAA 90 bp | AGAGAGTCTGCAAAGGCACTTGCACCCTGGTCACCAATGAGTGTGTaGCAGTTCAGTGTGATGCGCCGTAAGCCAGCCATGCAGTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: RESAKALAPWSPMSV*QFSVMRRKPAMQSR Trigger: TCTGGACTGCATGGCTGGCTTACGGCGCATCACACTGAACTGCAACACACTCATTGGTGACCAGGGTGCAAGTGCCTTTGCAGACTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047704.8 ENSMUST00000235718.2 |
||
| CDS GCA 72 bp | CCACAGGTCCTCACTAAGAGAGTCTGCAAAGGCACTTaGACCCTGGTCACCAATGAGTGTGTTGCAGTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: PQVLTKRVCKGT*TLVTNECVAVQ Trigger: CTGAACTGCAACACACTCATTGGTGACCAGGGTGCAAGTGCCTTTGCAGACTCTCTTAGTGAGGACCTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047704.8 ENSMUST00000235718.2 |
||
| CDS CAA 72 bp | GGGTTTTTCCTTATATCCAGAACGACCAGGGTTCTGTaGGTTTCCAGGGCCTCCAGTAAAGCCTTGGCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: GFFLISRTTRVL*VSRASSKALAP Trigger: AGGGGCCAAGGCTTTACTGGAGGCCCTGGAAACCAACAGAACCCTGGTCGTTCTGGATATAAGGAAAAACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047704.8 ENSMUST00000235718.2 |
||
| CDS CAA 72 bp | TGCTGCCCAAGACTCCTTCATCGTCCAGGATCATGTTaGTCAAGGACTGTGCATGAAGGGCTTCAGACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: CCPRLLHRPGSC*SRTVHEGLQTG Trigger: CCCTGTCTGAAGCCCTTCATGCACAGTCCTTGACAAACATGATCCTGGACGATGAAGGAGTCTTGGGCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047704.8 ENSMUST00000235718.2 |
||
| CDS CAA 72 bp | AAGCAGGTCAGGAAGCAGGAGTCGGATATCCTGCATTaGTCCGGTGGCAGTCTGTTTCGGATGCAGAGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: KQVRKQESDILH*SGGSLFRMQSF Trigger: GAAACTCTGCATCCGAAACAGACTGCCACCGGACAAATGCAGGATATCCGACTCCTGCTTCCTGACCTGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS CAA 90 bp | ATATTTCTTAGCTGGGCATTTTCATGTTCCAGCTCACTGACGCGCTaGTCGGCCTTGAGGCGGATCACTCTCTCCTCCTTCAGCTGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: IFLSWAFSCSSSLTR*SALRRITLSSFSCL Trigger: AAGGCAGCTGAAGGAGGAGAGAGTGATCCGCCTCAAGGCCGACAAGCGCGTCAGTGAGCTGGAACATGAAAATGCCCAGCTAAGAAATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047704.8 ENSMUST00000235718.2 |
||
| CDS CCA 72 bp | GGTTTTTCCTTATATCCAGAACGACCAGGGTTCTGTTaGTTTCCAGGGCCTCCAGTAAAGCCTTGGCCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: GFSLYPERPGFC*FPGPPVKPWPL Trigger: AAGGGGCCAAGGCTTTACTGGAGGCCCTGGAAACCAACAGAACCCTGGTCGTTCTGGATATAAGGAAAAACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047704.8 ENSMUST00000235718.2 |
||
| CDS CCA 72 bp | TTAGACGGTTCCTTTGATGATGGGGATGTAACCCACTaGTACTCTGAGTCTGCACTCCTTCCGTTCTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LDGSFDDGDVTH*YSESALLPFWR Trigger: CCTCCAGAACGGAAGGAGTGCAGACTCAGAGTACCAGTGGGTTACATCCCCATCATCAAAGGAACCGTCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047704.8 ENSMUST00000235718.2 |
||
| CDS CAA 90 bp | TCAATAAGTGGGTTTTTCCTTATATCCAGAACGACCAGGGTTCTGTaGGTTTCCAGGGCCTCCAGTAAAGCCTTGGCCCCTTCACTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SISGFFLISRTTRVL*VSRASSKALAPSLV Trigger: CACCAGTGAAGGGGCCAAGGCTTTACTGGAGGCCCTGGAAACCAACAGAACCCTGGTCGTTCTGGATATAAGGAAAAACCCACTTATTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047704.8 ENSMUST00000235718.2 |
||
| CDS CCA 72 bp | TCCTCACTAAGAGAGTCTGCAAAGGCACTTGCACCCTaGTCACCAATGAGTGTGTTGCAGTTCAGTGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: SSLRESAKALAP*SPMSVLQFSVM Trigger: CATCACACTGAACTGCAACACACTCATTGGTGACCAGGGTGCAAGTGCCTTTGCAGACTCTCTTAGTGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047704.8 ENSMUST00000235718.2 |
||
| CDS CCA 72 bp | CAGGAAGCAGGAGTCGGATATCCTGCATTTGTCCGGTaGCAGTCTGTTTCGGATGCAGAGTTTCATCTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: QEAGVGYPAFVR*QSVSDAEFHLQ Trigger: TTGAAGATGAAACTCTGCATCCGAAACAGACTGCCACCGGACAAATGCAGGATATCCGACTCCTGCTTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235718.2 |
||
| CDS CCA 72 bp | GGAGGCTCTCCGCCCAGGTTTCTTCATGCCTTCTCATaGTTTGATACTTTAAGATCTTGGCCATATGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: GGSPPRFLHAFS*FDTLRSWPYDR Trigger: CCTGTCATATGGCCAAGATCTTAAAGTATCAAACCATGAGAAGGCATGAAGAAACCTGGGCGGAGAGCCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047704.8 ENSMUST00000235718.2 |
||
| CDS CAA 90 bp | AATTCTCGATGCTGCCCAAGACTCCTTCATCGTCCAGGATCATGTTaGTCAAGGACTGTGCATGAAGGGCTTCAGACAGGGAGAAATTTA | + |
|
Preference number: 6 (lower is better) Translates to: NSRCCPRLLHRPGSC*SRTVHEGLQTGRNL Trigger: TAAATTTCTCCCTGTCTGAAGCCCTTCATGCACAGTCCTTGACAAACATGATCCTGGACGATGAAGGAGTCTTGGGCAGCATCGAGAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047704.8 ENSMUST00000235718.2 |
||
| CDS CAA 72 bp | ATCGCTGGTAATCTTCTGAAATCGGATATCCTGCATTaGTCCGGTGGCAGTCTGTTTCGGATGCAGAGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: IAGNLLKSDILH*SGGSLFRMQSF Trigger: GAAACTCTGCATCCGAAACAGACTGCCACCGGACAAATGCAGGATATCCGATTTCAGAAGATTACCAGCGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047704.8 |
||
| CDS CAA 90 bp | AATCAGAGCATCGCTGGTAATCTTCTGAAATCGGATATCCTGCATTaGTCCGGTGGCAGTCTGTTTCGGATGCAGAGTTTCATCTTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: NQSIAGNLLKSDILH*SGGSLFRMQSFIFK Trigger: CTTGAAGATGAAACTCTGCATCCGAAACAGACTGCCACCGGACAAATGCAGGATATCCGATTTCAGAAGATTACCAGCGATGCTCTGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047704.8 |
||
| CDS GCA 72 bp | ATATCCTGCATTTGTCCGGTGGCAGTCTGTTTCGGATaGAGAGTTTCATCTTCAAGTGCCTTCTGTTCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: ISCICPVAVCFG*RVSSSSAFCSC Trigger: ACAAGAACAGAAGGCACTTGAAGATGAAACTCTGCATCCGAAACAGACTGCCACCGGACAAATGCAGGATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047704.8 ENSMUST00000235718.2 |
||
| CDS GCA 72 bp | TTCCGGCTGCTTCCTAAGACAATTGTTTTCTTTCTCTaGTTAGCGGTTTTAGACGGTTCCTTTGATGATGGG | + |
|
Preference number: 6 (lower is better) Translates to: FRLLPKTIVFFL*LAVLDGSFDDG Trigger: CCCATCATCAAAGGAACCGTCTAAAACCGCTAAGCAGAGAAAGAAAACAATTGTCTTAGGAAGCAGCCGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047704.8 ENSMUST00000235718.2 |
||
| CDS GCA 72 bp | GGCAGTCTGTTTCGGATGCAGAGTTTCATCTTCAAGTaGCTTCTGTTCTTGTATAGGTGTATTAACCGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: GSLFRMQSFIFK*LLFLYRCINRG Trigger: TCCACGGTTAATACACCTATACAAGAACAGAAGGCACTTGAAGATGAAACTCTGCATCCGAAACAGACTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047704.8 ENSMUST00000235718.2 |
||
| CDS CAA 72 bp | CGGATGCAGAGTTTCATCTTCAAGTGCCTTCTGTTCTaGTATAGGTGTATTAACCGTGGAATTCATCTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: RMQSFIFKCLLF*YRCINRGIHLR Trigger: CCGCAGATGAATTCCACGGTTAATACACCTATACAAGAACAGAAGGCACTTGAAGATGAAACTCTGCATCCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047704.8 ENSMUST00000235718.2 |
||
| CDS GCA 72 bp | TGCACTCCTTCCGTTCTGGAGGACCTTTTTGATAACTaGTTTCATCATAGAATGATCAATAAGTGGGTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: CTPSVLEDLFDN*FHHRMINKWVF Trigger: AAAAACCCACTTATTGATCATTCTATGATGAAAGCAGTTATCAAAAAGGTCCTCCAGAACGGAAGGAGTGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047704.8 ENSMUST00000235718.2 |
||
| CDS TCA 72 bp | ACTGTCACAGTCACCGGGAAATCTGATTTCTTCAGGTaGTTTGATAGATCACGAGTTTTGATTAATGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: TVTVTGKSDFFR*FDRSRVLINEE Trigger: TTCTTCATTAATCAAAACTCGTGATCTATCAAATCACCTGAAGAAATCAGATTTCCCGGTGACTGTGACAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047704.8 ENSMUST00000235718.2 |
||
| CDS TCA 72 bp | CTGATTTCTTCAGGTGATTTGATAGATCACGAGTTTTaGTTAATGAAGAACTCCTGCTTCTTTTTGCACGTT | + |
|
Preference number: 6 (lower is better) Translates to: LISSGDLIDHEF*LMKNSCFFLHV Trigger: AACGTGCAAAAAGAAGCAGGAGTTCTTCATTAATCAAAACTCGTGATCTATCAAATCACCTGAAGAAATCAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047704.8 ENSMUST00000235718.2 |
||