Pregenerated sensors for CENPT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036672Ensembl transcript IDs: ENSMUST00000040776.6, ENSMUST00000212431.2, ENSMUST00000212552.2, ENSMUST00000212839.2
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGGCTCAGTCCAGCCTTGTGGGGGTCTTGGCGGCGCCTAGGACCTaGAGTTTGGGTCCTGGATGGGCACTTAGCTGTCACAGACTCCAG | + |
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Preference number: 1 (lower is better) Translates to: GAQSSLVGVLAAPRT*SLGPGWALSCHRLQ Trigger: CTGGAGTCTGTGACAGCTAAGTGCCCATCCAGGACCCAAACTGCAGGTCCTAGGCGCCGCCAAGACCCCCACAAGGCTGGACTGAGCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212431.2 |
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| 3UTR TCA 90 bp | CTACACATCTTGGGTCAGGCACCAGGACGGCAGACAGGCTGGAGCTaGCTGCAACTCCAGGTGACGGGGGTGGCTGTTCAGCTGGGAGTG | + |
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Preference number: 1 (lower is better) Translates to: LHILGQAPGRQTGWS*LQLQVTGVAVQLGV Trigger: CACTCCCAGCTGAACAGCCACCCCCGTCACCTGGAGTTGCAGTCAGCTCCAGCCTGTCTGCCGTCCTGGTGCCTGACCCAAGATGTGTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212431.2 |
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| 3UTR CCA 90 bp | ACTGCTCTCCCGTCTGGAGGACCGGGCCACTTCTGGTACTTGTGCTaGCTTCACCACTGGGTCTGGCATCACAGTGGACGATTCTGGGGC | + |
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Preference number: 1 (lower is better) Translates to: TALPSGGPGHFWYLC*LHHWVWHHSGRFWG Trigger: GCCCCAGAATCGTCCACTGTGATGCCAGACCCAGTGGTGAAGCCAGCACAAGTACCAGAAGTGGCCCGGTCCTCCAGACGGGAGAGCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212431.2 ENSMUST00000212839.2 |
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| 3UTR TCA 90 bp | CTTAGCAGAGTCCGGGGTGTCTGTTCCTCCAGGCGCCCACGACCTTaGACACGAGTCGATCTGCCAACTGACTATGGGTACAAGCGCCAC | + |
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Preference number: 1 (lower is better) Translates to: LSRVRGVCSSRRPRP*TRVDLPTDYGYKRH Trigger: GTGGCGCTTGTACCCATAGTCAGTTGGCAGATCGACTCGTGTTCAAGGTCGTGGGCGCCTGGAGGAACAGACACCCCGGACTCTGCTAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212431.2 ENSMUST00000212839.2 |
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| 3UTR CCA 90 bp | TCTGGAGGACCGGGCCACTTCTGGTACTTGTGCTGGCTTCACCACTaGGTCTGGCATCACAGTGGACGATTCTGGGGCTATAGAATGAGC | + |
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Preference number: 1 (lower is better) Translates to: SGGPGHFWYLCWLHH*VWHHSGRFWGYRMS Trigger: GCTCATTCTATAGCCCCAGAATCGTCCACTGTGATGCCAGACCCAGTGGTGAAGCCAGCACAAGTACCAGAAGTGGCCCGGTCCTCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212839.2 |
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| 3UTR GCA 90 bp | GTGTCTGTTCCTCCAGGCGCCCACGACCTTGAACACGAGTCGATCTaGCAACTGACTATGGGTACAAGCGCCACTAGTCTCTCTTTTGGC | + |
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Preference number: 1 (lower is better) Translates to: VSVPPGAHDLEHESI*QLTMGTSATSLSFG Trigger: GCCAAAAGAGAGACTAGTGGCGCTTGTACCCATAGTCAGTTGGCAGATCGACTCGTGTTCAAGGTCGTGGGCGCCTGGAGGAACAGACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212431.2 ENSMUST00000212839.2 |
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| 3UTR CCA 90 bp | GGACCGGGCCACTTCTGGTACTTGTGCTGGCTTCACCACTGGGTCTaGCATCACAGTGGACGATTCTGGGGCTATAGAATGAGCAAGAAA | + |
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Preference number: 1 (lower is better) Translates to: GPGHFWYLCWLHHWV*HHSGRFWGYRMSKK Trigger: TTTCTTGCTCATTCTATAGCCCCAGAATCGTCCACTGTGATGCCAGACCCAGTGGTGAAGCCAGCACAAGTACCAGAAGTGGCCCGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212839.2 |
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| 3UTR TCA 90 bp | GGGCAGAGAATGTTTCCCACTAAGGGAAAAGGCAGCCAAGGACTGTaGGAAAGGCTGTGTGTCTTCCAAGCCTACATCCATCGGCAGAGC | + |
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Preference number: 1 (lower is better) Translates to: GQRMFPTKGKGSQGL*ERLCVFQAYIHRQS Trigger: GCTCTGCCGATGGATGTAGGCTTGGAAGACACACAGCCTTTCTCACAGTCCTTGGCTGCCTTTTCCCTTAGTGGGAAACATTCTCTGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212431.2 |
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| 3UTR TCA 90 bp | CTTGCTGGCCTAGCAGAAGTTTCCTCATACCCTGAAGATCCTTCTTaGTCCTTGGGCTCCGCAGCCTCGTTGGATCCTACTGCTTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: LAGLAEVSSYPEDPS*SLGSAASLDPTASL Trigger: GAGAGAAGCAGTAGGATCCAACGAGGCTGCGGAGCCCAAGGATCAAGAAGGATCTTCAGGGTATGAGGAAACTTCTGCTAGGCCAGCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212431.2 |
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| 3UTR GCA 90 bp | TCCTTTCCAGGCTGGGGGAAGGCAACCTGGGCAGGTCCTAAGACATaGACCACAAAGCAGAAGAACCCATTTGTGAGACTTTCTTGGTGC | + |
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Preference number: 1 (lower is better) Translates to: SFPGWGKATWAGPKT*TTKQKNPFVRLSWC Trigger: GCACCAAGAAAGTCTCACAAATGGGTTCTTCTGCTTTGTGGTGCATGTCTTAGGACCTGCCCAGGTTGCCTTCCCCCAGCCTGGAAAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040776.6 ENSMUST00000212431.2 |
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| 3UTR CCA 90 bp | TTGTGCTGGCTTCACCACTGGGTCTGGCATCACAGTGGACGATTCTaGGGCTATAGAATGAGCAAGAAAAGGGTGGGGCAGTTAGTAAGA | + |
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Preference number: 1 (lower is better) Translates to: LCWLHHWVWHHSGRF*GYRMSKKRVGQLVR Trigger: TCTTACTAACTGCCCCACCCTTTTCTTGCTCATTCTATAGCCCCAGAATCGTCCACTGTGATGCCAGACCCAGTGGTGAAGCCAGCACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212839.2 |
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| 3UTR TCA 90 bp | CCATTTGTGAGACTTTCTTGGTGCCAGGAGATGAGGGAACCTTCATaGTTGTGTAGGGTTCAAGATTTCCAAGGTAGGGAGAGTAGGTGC | + |
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Preference number: 1 (lower is better) Translates to: PFVRLSWCQEMREPS*LCRVQDFQGRESRC Trigger: GCACCTACTCTCCCTACCTTGGAAATCTTGAACCCTACACAATCATGAAGGTTCCCTCATCTCCTGGCACCAAGAAAGTCTCACAAATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040776.6 ENSMUST00000212431.2 |
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| 3UTR GCA 90 bp | GCTACCCTGCCTGTTAGAGTATGGCGTTTGAGACCGTCTTCTTTGTaGACTTATCATGAACGAGTCTCCACTTGGAAAGAAGGGCATTCT | + |
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Preference number: 1 (lower is better) Translates to: ATLPVRVWRLRPSSL*TYHERVSTWKEGHS Trigger: AGAATGCCCTTCTTTCCAAGTGGAGACTCGTTCATGATAAGTGCACAAAGAAGACGGTCTCAAACGCCATACTCTAACAGGCAGGGTAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212552.2 |
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| 3UTR CCA 90 bp | AAAGTCTTTAATTCCTATTCCTTTCCAGGCTGGGGGAAGGCAACCTaGGCAGGTCCTAAGACATGCACCACAAAGCAGAAGAACCCATTT | + |
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Preference number: 1 (lower is better) Translates to: KVFNSYSFPGWGKAT*AGPKTCTTKQKNPF Trigger: AAATGGGTTCTTCTGCTTTGTGGTGCATGTCTTAGGACCTGCCCAGGTTGCCTTCCCCCAGCCTGGAAAGGAATAGGAATTAAAGACTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040776.6 ENSMUST00000212431.2 |
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| 3UTR GCA 90 bp | TCACAATCTTACGGCCAGCATGAGAAGCAAATACCTCCAGGTCATTaGAAAGGTGCTGGAAATACTTGTCTAGGCACTTCTCTACTATCT | + |
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Preference number: 1 (lower is better) Translates to: SQSYGQHEKQIPPGH*KGAGNTCLGTSLLS Trigger: AGATAGTAGAGAAGTGCCTAGACAAGTATTTCCAGCACCTTTGCAATGACCTGGAGGTATTTGCTTCTCATGCTGGCCGTAAGATTGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212431.2 |
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| 3UTR CAA 90 bp | GAAGGGGGAAGGAGAGGCAGCAGGGCCAGATCTGCTCATCCGGCTTaGCAGCCTGGTCCCCGAGCTTGGTGGGCCCATAACTCTTTCAAC | + |
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Preference number: 2 (lower is better) Translates to: EGGRRGSRARSAHPA*QPGPRAWWAHNSFN Trigger: GTTGAAAGAGTTATGGGCCCACCAAGCTCGGGGACCAGGCTGCAAAGCCGGATGAGCAGATCTGGCCCTGCTGCCTCTCCTTCCCCCTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212431.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTCCAGTTCAGGAAGGTGTAGCTCCAGGCTTCCCCGACTGCTCTCCCGTCTGTGGGGGAAGGCAACCTaGGCAGGTCCTAAGACATGC | + |
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Preference number: 2 (lower is better) Translates to: GSSSGRCSSRLPRLLSRLWGKAT*AGPKTC Trigger: GCATGTCTTAGGACCTGCCCAGGTTGCCTTCCCCCA...CAGACGGGAGAGCAGTCGGGGAAGCCTGGAGCTACACCTTCCTGAACTGGAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212431.2 |
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| 3UTR CAA 90 bp | GCTGAAGAACTTCACATAGGGGCTCAGTCCAGCCTTGTGGGGGTCTaGGCGGCGCCTAGGACCTGCAGTTTGGGTCCTGGATGGGCACTT | + |
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Preference number: 2 (lower is better) Translates to: AEELHIGAQSSLVGV*AAPRTCSLGPGWAL Trigger: AAGTGCCCATCCAGGACCCAAACTGCAGGTCCTAGGCGCCGCCAAGACCCCCACAAGGCTGGACTGAGCCCCTATGTGAAGTTCTTCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212431.2 |
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| 3UTR-3UTR CCA 90 bp | GTTCAGCTGGGAGTGAGTCATGTGTGCTGGAGGATAATTCTCCACTTGCTGGCCTATTCCTTTCCAGGCTaGGGGAAGGCAACCTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: VQLGVSHVCWRIILHLLAYSFPG*GKATWA Trigger: TGCCCAGGTTGCCTTCCCCCAGCCTGGAAAGGAATA...GGCCAGCAAGTGGAGAATTATCCTCCAGCACACATGACTCACTCCCAGCTGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212431.2 |
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| 3UTR-3UTR TCA 90 bp | CCTATTCCTTTCCAGGCTGGGGGAAGGCAACCTGGGCAGGTCCTAAGACATGCAAGAAGAACCCATTTGTaGGACTTTCTTGGTGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: PIPFQAGGRQPGQVLRHARRTHL*DFLGAR Trigger: CCTGGCACCAAGAAAGTCTCACAAATGGGTTCTTCT...TGCATGTCTTAGGACCTGCCCAGGTTGCCTTCCCCCAGCCTGGAAAGGAATAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040776.6 ENSMUST00000212431.2 |
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| 3UTR-3UTR TCA 90 bp | GCTAAGCTCTTCTACACATCTTGGGTCAGGCACCAGGACGGCAGACAGGCTGGAAGAAGAACCCATTTGTaGGACTTTCTTGGTGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: AKLFYTSWVRHQDGRQAGRRTHL*DFLGAR Trigger: CCTGGCACCAAGAAAGTCTCACAAATGGGTTCTTCT...TCCAGCCTGTCTGCCGTCCTGGTGCCTGACCCAAGATGTGTAGAAGAGCTTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212431.2 |
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| 3UTR-3UTR GCA 90 bp | AGAAGGGCTGGGCAGAGAATGTTTCCCACTAAGGGAAAAGGCAGCCAAGGACTGGTTTCTGCTTCCTTTTaGCAGGGGCTGTTAGACCCG | + |
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Preference number: 2 (lower is better) Translates to: RRAGQRMFPTKGKGSQGLVSASF*QGLLDP Trigger: CGGGTCTAACAGCCCCTGGCAAAAGGAAGCAGAAAC...CAGTCCTTGGCTGCCTTTTCCCTTAGTGGGAAACATTCTCTGCCCAGCCCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000212431.2 |
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| 3UTR-3UTR TCA 90 bp | AGTGAGTCATGTGTGCTGGAGGATAATTCTCCACTTGCTGGCCTAGCAGAAGTTGGCAGCCAAGGACTGTaGGAAAGGCTGTGTGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: SESCVLEDNSPLAGLAEVGSQGL*ERLCVF Trigger: GAAGACACACAGCCTTTCTCACAGTCCTTGGCTGCC...AACTTCTGCTAGGCCAGCAAGTGGAGAATTATCCTCCAGCACACATGACTCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212431.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCATACCCTGAAGATCCTTCTTGATCCTTGGGCTCCGCAGCCTCGTTGGATCTTTGTGAGACTTTCTTaGTGCCAGGAGATGAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: PHTLKILLDPWAPQPRWIFVRLS*CQEMRE Trigger: TTCCCTCATCTCCTGGCACCAAGAAAGTCTCACAAA...GATCCAACGAGGCTGCGGAGCCCAAGGATCAAGAAGGATCTTCAGGGTATGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212431.2 |
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| 3UTR-3UTR CCA 90 bp | ATACTGATAATCTCAGTTTCTGCTTCCTTTTGCCAGGGGCTGTTAGACCCGGAGTGCTGGCTTCACCACTaGGTCTGGCATCACAGTGGA | + |
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Preference number: 2 (lower is better) Translates to: ILIISVSASFCQGLLDPECWLHH*VWHHSG Trigger: TCCACTGTGATGCCAGACCCAGTGGTGAAGCCAGCA...CTCCGGGTCTAACAGCCCCTGGCAAAAGGAAGCAGAAACTGAGATTATCAGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000212431.2 ENSMUST00000212839.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGCAGGTCCTAAGACATGCACCACAAAGCAGAAGAACCCATTTGTGAGACTTAGTCGATCTGCCAACTaGCTATGGGTACAAGCGCCA | + |
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Preference number: 2 (lower is better) Translates to: WAGPKTCTTKQKNPFVRLSRSAN*LWVQAP Trigger: TGGCGCTTGTACCCATAGTCAGTTGGCAGATCGACT...AAGTCTCACAAATGGGTTCTTCTGCTTTGTGGTGCATGTCTTAGGACCTGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212431.2 |
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| 3UTR-3UTR CCA 90 bp | CATCTTAGTACAGAAGCTGAAGAACTTCACATAGGGGCTCAGTCCAGCCTTGTGGGTCTGGCATCACAGTaGACGATTCTGGGGCAGTTA | + |
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Preference number: 2 (lower is better) Translates to: HLSTEAEELHIGAQSSLVGLASQ*TILGQL Trigger: TAACTGCCCCAGAATCGTCCACTGTGATGCCAGACC...CACAAGGCTGGACTGAGCCCCTATGTGAAGTTCTTCAGCTTCTGTACTAAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212431.2 |
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| 3UTR-3UTR CCA 90 bp | ATACTGATAATCTCAGTTTCTGCTTCCTTTTGCCAGGGGCTGTTAGACCCGGAGCTTCACCACTGGGTCTaGCATCACAGTGGACGATTC | + |
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Preference number: 2 (lower is better) Translates to: ILIISVSASFCQGLLDPELHHWV*HHSGRF Trigger: GAATCGTCCACTGTGATGCCAGACCCAGTGGTGAAG...CTCCGGGTCTAACAGCCCCTGGCAAAAGGAAGCAGAAACTGAGATTATCAGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000212431.2 ENSMUST00000212839.2 |
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| 3UTR-3UTR CCA 90 bp | CATCTTAGTACAGAAGCTGAAGAACTTCACATAGGGGCTCAGTCCAGCCTTGTGAAGATTGAAGGAGCTTaGGAGAGAGGCAACCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: HLSTEAEELHIGAQSSLVKIEGA*ERGNPW Trigger: CCAGGGGTTGCCTCTCTCCCAAGCTCCTTCAATCTT...CACAAGGCTGGACTGAGCCCCTATGTGAAGTTCTTCAGCTTCTGTACTAAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212431.2 |
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| 3UTR CAA 90 bp | TTGGCTACCCTGCCTGTTAGAGTATGGCGTTTGAGACCGTCTTCTTaGTGCACTTATCATGAACGAGTCTCCACTTGGAAAGAAGGGCAT | + |
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Preference number: 2 (lower is better) Translates to: LATLPVRVWRLRPSS*CTYHERVSTWKEGH Trigger: ATGCCCTTCTTTCCAAGTGGAGACTCGTTCATGATAAGTGCACAAAGAAGACGGTCTCAAACGCCATACTCTAACAGGCAGGGTAGCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212552.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTCTACTATCTCAAGAGCCGTCTTCTCCACGGGCATCTTAGTACAGAAGCTGGCAGGTCCTAAGACATaGACCACAAAGCAGAAGAAC | + |
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Preference number: 2 (lower is better) Translates to: FSTISRAVFSTGILVQKLAGPKT*TTKQKN Trigger: GTTCTTCTGCTTTGTGGTGCATGTCTTAGGACCTGC...CAGCTTCTGTACTAAGATGCCCGTGGAGAAGACGGCTCTTGAGATAGTAGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212431.2 |
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| 3UTR-3UTR GCA 90 bp | GTTCAAGATTTCCAAGGTAGGGAGAGTAGGTGCCAGGGAAGGCCTGGTCCTACTAGAATTGCCACTGAATaGACAAGGGATAAGTTGTTG | + |
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Preference number: 2 (lower is better) Translates to: VQDFQGRESRCQGRPGPTRIATE*TRDKLL Trigger: CAACAACTTATCCCTTGTGCATTCAGTGGCAATTCT...AGTAGGACCAGGCCTTCCCTGGCACCTACTCTCCCTACCTTGGAAATCTTGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212431.2 |
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| 3UTR-3UTR GCA 90 bp | TCTTTGTGCACTTATCATGAACGAGTCTCCACTTGGAAAGAAGGGCATTCTTCCAACTTCGGTACCTTCTaGTCACAACCCTCCTTAAGC | + |
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Preference number: 2 (lower is better) Translates to: SLCTYHERVSTWKEGHSSNFGTF*SQPSLS Trigger: GCTTAAGGAGGGTTGTGAGCAGAAGGTACCGAAGTT...GGAAGAATGCCCTTCTTTCCAAGTGGAGACTCGTTCATGATAAGTGCACAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212552.2 |
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| 3UTR GCA 72 bp | CGCAGCCTCGTTGGATCCTACTGCTTCTCTCGGTTCTaGAGGCGGAGGCTGTGGCTCCAGGAAGGGGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: RSLVGSYCFSRF*RRRLWLQEGGR Trigger: CCTTCCCCCTTCCTGGAGCCACAGCCTCCGCCTGCAGAACCGAGAGAAGCAGTAGGATCCAACGAGGCTGCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212431.2 |
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| 3UTR GCA 72 bp | TCCAGCCTTGTGGGGGTCTTGGCGGCGCCTAGGACCTaGAGTTTGGGTCCTGGATGGGCACTTAGCTGTCAC | + |
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Preference number: 3 (lower is better) Translates to: SSLVGVLAAPRT*SLGPGWALSCH Trigger: GTGACAGCTAAGTGCCCATCCAGGACCCAAACTGCAGGTCCTAGGCGCCGCCAAGACCCCCACAAGGCTGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212431.2 |
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| 3UTR GCA 72 bp | CTCCCGTCTGGAGGACCGGGCCACTTCTGGTACTTGTaGTGGCTTCACCACTGGGTCTGGCATCACAGTGGA | + |
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Preference number: 3 (lower is better) Translates to: LPSGGPGHFWYL*WLHHWVWHHSG Trigger: TCCACTGTGATGCCAGACCCAGTGGTGAAGCCAGCACAAGTACCAGAAGTGGCCCGGTCCTCCAGACGGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000212431.2 ENSMUST00000212839.2 |
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| 3UTR TCA 72 bp | GTCCGGGGTGTCTGTTCCTCCAGGCGCCCACGACCTTaGACACGAGTCGATCTGCCAACTGACTATGGGTAC | + |
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Preference number: 3 (lower is better) Translates to: VRGVCSSRRPRP*TRVDLPTDYGY Trigger: GTACCCATAGTCAGTTGGCAGATCGACTCGTGTTCAAGGTCGTGGGCGCCTGGAGGAACAGACACCCCGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000212431.2 ENSMUST00000212839.2 |
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| 3UTR CCA 72 bp | CCGGGCCACTTCTGGTACTTGTGCTGGCTTCACCACTaGGTCTGGCATCACAGTGGACGATTCTGGGGCAGT | + |
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Preference number: 3 (lower is better) Translates to: PGHFWYLCWLHH*VWHHSGRFWGS Trigger: ACTGCCCCAGAATCGTCCACTGTGATGCCAGACCCAGTGGTGAAGCCAGCACAAGTACCAGAAGTGGCCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212431.2 |
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| 3UTR CCA 72 bp | CCGGGCCACTTCTGGTACTTGTGCTGGCTTCACCACTaGGTCTGGCATCACAGTGGACGATTCTGGGGCTAT | + |
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Preference number: 3 (lower is better) Translates to: PGHFWYLCWLHH*VWHHSGRFWGY Trigger: ATAGCCCCAGAATCGTCCACTGTGATGCCAGACCCAGTGGTGAAGCCAGCACAAGTACCAGAAGTGGCCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212839.2 |
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| 3UTR CCA 72 bp | AAGATCCTTCTTGATCCTTGGGCTCCGCAGCCTCGTTaGATCCTACTGCTTCTCTCGGTTCTGCAGGCGGAG | + |
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Preference number: 3 (lower is better) Translates to: KILLDPWAPQPR*ILLLLSVLQAE Trigger: CTCCGCCTGCAGAACCGAGAGAAGCAGTAGGATCCAACGAGGCTGCGGAGCCCAAGGATCAAGAAGGATCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212431.2 |
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| 3UTR-3UTR CAA 90 bp | CCTCATACCCTGAAGATCCTTCTTGATCCTTGGGCTCCGCAGCCTCGTTGGATCAGTTTCTGCTTCCTTTaGCCAGGGGCTGTTAGACCC | + |
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Preference number: 3 (lower is better) Translates to: PHTLKILLDPWAPQPRWISFCFL*PGAVRP Trigger: GGGTCTAACAGCCCCTGGCAAAAGGAAGCAGAAACT...GATCCAACGAGGCTGCGGAGCCCAAGGATCAAGAAGGATCTTCAGGGTATGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212431.2 |
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| 3UTR TCA 72 bp | TCCACTTGCTGGCCTAGCAGAAGTTTCCTCATACCCTaGAGATCCTTCTTGATCCTTGGGCTCCGCAGCCTC | + |
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Preference number: 3 (lower is better) Translates to: STCWPSRSFLIP*RSFLILGLRSL Trigger: GAGGCTGCGGAGCCCAAGGATCAAGAAGGATCTTCAGGGTATGAGGAAACTTCTGCTAGGCCAGCAAGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212431.2 |
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| 3UTR GCA 72 bp | GGCTGGGGGAAGGCAACCTGGGCAGGTCCTAAGACATaGACCACAAAGCAGAAGAACCCATTTGTGAGACTT | + |
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Preference number: 3 (lower is better) Translates to: GWGKATWAGPKT*TTKQKNPFVRL Trigger: AAGTCTCACAAATGGGTTCTTCTGCTTTGTGGTGCATGTCTTAGGACCTGCCCAGGTTGCCTTCCCCCAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040776.6 ENSMUST00000212431.2 |
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| 3UTR GCA 72 bp | ACAGAATTGCCACTGAATGCACAAGGGATAAGTTGTTaGCGGTACTCCAAGGGCAGGTACCGCTCCACGAGC | + |
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Preference number: 3 (lower is better) Translates to: TELPLNAQGISC*RYSKGRYRSTS Trigger: GCTCGTGGAGCGGTACCTGCCCTTGGAGTACCGGCAACAACTTATCCCTTGTGCATTCAGTGGCAATTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212431.2 |
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| 3UTR GCA 72 bp | TGTAGGGTTCAAGATTTCCAAGGTAGGGAGAGTAGGTaGCAGGGAAGGCCTGGTCCTACTGTGCAGGGAAGA | + |
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Preference number: 3 (lower is better) Translates to: CRVQDFQGRESR*QGRPGPTVQGR Trigger: TCTTCCCTGCACAGTAGGACCAGGCCTTCCCTGGCACCTACTCTCCCTACCTTGGAAATCTTGAACCCTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212431.2 |
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| 3UTR CCA 72 bp | CTTCACCACTGGGTCTGGCATCACAGTGGACGATTCTaGGGCTATAGAATGAGCAAGAAAAGGGTGGGGCAG | + |
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Preference number: 3 (lower is better) Translates to: LHHWVWHHSGRF*GYRMSKKRVGQ Trigger: CTGCCCCACCCTTTTCTTGCTCATTCTATAGCCCCAGAATCGTCCACTGTGATGCCAGACCCAGTGGTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212839.2 |
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| 3UTR CCA 72 bp | AATTCCTATTCCTTTCCAGGCTGGGGGAAGGCAACCTaGGCAGGTCCTAAGACATGCACCACAAAGCAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: NSYSFPGWGKAT*AGPKTCTTKQK Trigger: CTTCTGCTTTGTGGTGCATGTCTTAGGACCTGCCCAGGTTGCCTTCCCCCAGCCTGGAAAGGAATAGGAATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040776.6 ENSMUST00000212431.2 |
||
| 3UTR CCA 72 bp | CACTTCTGGTACTTGTGCTGGCTTCACCACTGGGTCTaGCATCACAGTGGACGATTCTGGGGCTATAGAATG | + |
|
Preference number: 3 (lower is better) Translates to: HFWYLCWLHHWV*HHSGRFWGYRM Trigger: CATTCTATAGCCCCAGAATCGTCCACTGTGATGCCAGACCCAGTGGTGAAGCCAGCACAAGTACCAGAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212839.2 |
||
| 3UTR TCA 72 bp | CTTCGAGCCAGACCAGGTCTCTCCACTGTCTCTGGCTaGCCAGGTAGAACAAAGGTAAGATTGAAGGAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: LRARPGLSTVSG*PGRTKVRLKEL Trigger: AAGCTCCTTCAATCTTACCTTTGTTCTACCTGGTCAGCCAGAGACAGTGGAGAGACCTGGTCTGGCTCGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212431.2 |
||
| 3UTR TCA 72 bp | CTAGCAGAAGTTTCCTCATACCCTGAAGATCCTTCTTaGTCCTTGGGCTCCGCAGCCTCGTTGGATCCTACT | + |
|
Preference number: 3 (lower is better) Translates to: LAEVSSYPEDPS*SLGSAASLDPT Trigger: AGTAGGATCCAACGAGGCTGCGGAGCCCAAGGATCAAGAAGGATCTTCAGGGTATGAGGAAACTTCTGCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212431.2 |
||
| 3UTR GCA 72 bp | GCTGAAATACTGATAATCTCAGTTTCTGCTTCCTTTTaGCAGGGGCTGTTAGACCCGGAGCCAGGGTTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: AEILIISVSASF*QGLLDPEPGLR Trigger: CCTCAACCCTGGCTCCGGGTCTAACAGCCCCTGGCAAAAGGAAGCAGAAACTGAGATTATCAGTATTTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000212431.2 ENSMUST00000212839.2 |
||
| 3UTR CCA 72 bp | TCTCCACTTGGAAAGAAGGGCATTCTTCCAGACTGGTaGAAGCCAACTTCGGTACCTTCTGCTCACAACCCT | + |
|
Preference number: 3 (lower is better) Translates to: SPLGKKGILPDW*KPTSVPSAHNP Trigger: AGGGTTGTGAGCAGAAGGTACCGAAGTTGGCTTCCACCAGTCTGGAAGAATGCCCTTCTTTCCAAGTGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212552.2 |
||
| 3UTR CCA 72 bp | GAGTCTCCACTTGGAAAGAAGGGCATTCTTCCAGACTaGTGGAAGCCAACTTCGGTACCTTCTGCTCACAAC | + |
|
Preference number: 3 (lower is better) Translates to: ESPLGKKGILPD*WKPTSVPSAHN Trigger: GTTGTGAGCAGAAGGTACCGAAGTTGGCTTCCACCAGTCTGGAAGAATGCCCTTCTTTCCAAGTGGAGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212552.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCTGGAAATACTTGTCTAGGCACTTCTCTACTATCTCAAGAGCCGTCTTCTCCAGTCTCTCTTTTGGCTaGAGAGCCCCTCAAGGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: CWKYLSRHFSTISRAVFSSLSFG*RAPQGR Trigger: CCTACCTTGAGGGGCTCTCAAGCCAAAAGAGAGACT...GGAGAAGACGGCTCTTGAGATAGTAGAGAAGTGCCTAGACAAGTATTTCCAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212431.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCCACGGGCATCTTAGTACAGAAGCTGAAGAACTTCACATAGGGGCTCAGTCCAGAACAAAGGTAAGATaGAAGGAGCTTGGGAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LHGHLSTEAEELHIGAQSRTKVR*KELGRE Trigger: CTCTCTCCCAAGCTCCTTCAATCTTACCTTTGTTCT...GGACTGAGCCCCTATGTGAAGTTCTTCAGCTTCTGTACTAAGATGCCCGTGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212431.2 |
||
| 3UTR TCA 72 bp | GCTTGGGAGAGAGGCAACCCCTGGTCCACTTCCTGCTaGAATACTGATAATCTCAGTTTCTGCTTCCTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: AWERGNPWSTSC*NTDNLSFCFLL Trigger: CAAAAGGAAGCAGAAACTGAGATTATCAGTATTTCAGCAGGAAGTGGACCAGGGGTTGCCTCTCTCCCAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212431.2 |
||
| 3UTR TCA 72 bp | ATGTTTCCCACTAAGGGAAAAGGCAGCCAAGGACTGTaGGAAAGGCTGTGTGTCTTCCAAGCCTACATCCAT | + |
|
Preference number: 3 (lower is better) Translates to: MFPTKGKGSQGL*ERLCVFQAYIH Trigger: ATGGATGTAGGCTTGGAAGACACACAGCCTTTCTCACAGTCCTTGGCTGCCTTTTCCCTTAGTGGGAAACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212431.2 |
||
| 3UTR TCA 72 bp | AGACTTTCTTGGTGCCAGGAGATGAGGGAACCTTCATaGTTGTGTAGGGTTCAAGATTTCCAAGGTAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: RLSWCQEMREPS*LCRVQDFQGRE Trigger: CTCCCTACCTTGGAAATCTTGAACCCTACACAATCATGAAGGTTCCCTCATCTCCTGGCACCAAGAAAGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040776.6 ENSMUST00000212431.2 |
||
| 3UTR TCA 72 bp | TCTTGGGAGAGAGGCAACCCCTGGTCCACTTCCTGCTaGAATACTGATAATCTCAGTTTCTGCTTCCTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: SWERGNPWSTSC*NTDNLSFCFLL Trigger: CAAAAGGAAGCAGAAACTGAGATTATCAGTATTTCAGCAGGAAGTGGACCAGGGGTTGCCTCTCTCCCAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212839.2 |
||
| 3UTR GCA 72 bp | TACGGCCAGCATGAGAAGCAAATACCTCCAGGTCATTaGAAAGGTGCTGGAAATACTTGTCTAGGCACTTCT | + |
|
Preference number: 3 (lower is better) Translates to: YGQHEKQIPPGH*KGAGNTCLGTS Trigger: AGAAGTGCCTAGACAAGTATTTCCAGCACCTTTGCAATGACCTGGAGGTATTTGCTTCTCATGCTGGCCGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212431.2 |
||
| 3UTR CCA 72 bp | TCTTCTTTGTGCACTTATCATGAACGAGTCTCCACTTaGAAAGAAGGGCATTCTTCCAGACTGGTGGAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: SSLCTYHERVST*KEGHSSRLVEA Trigger: GGCTTCCACCAGTCTGGAAGAATGCCCTTCTTTCCAAGTGGAGACTCGTTCATGATAAGTGCACAAAGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212552.2 |
||
| 3UTR TCA 72 bp | ATGGCGTTTGAGACCGTCTTCTTTGTGCACTTATCATaGACGAGTCTCCACTTGGAAAGAAGGGCATTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: MAFETVFFVHLS*TSLHLERRAFF Trigger: GAAGAATGCCCTTCTTTCCAAGTGGAGACTCGTTCATGATAAGTGCACAAAGAAGACGGTCTCAAACGCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212552.2 |
||
| 3UTR CCA 72 bp | ACTTGTCTTTGTTTGGCTACCCTGCCTGTTAGAGTATaGCGTTTGAGACCGTCTTCTTTGTGCACTTATCAT | + |
|
Preference number: 3 (lower is better) Translates to: TCLCLATLPVRV*RLRPSSLCTYH Trigger: ATGATAAGTGCACAAAGAAGACGGTCTCAAACGCCATACTCTAACAGGCAGGGTAGCCAAACAAAGACAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212552.2 |
||
| 3UTR CAA 72 bp | AGGAGAGGCAGCAGGGCCAGATCTGCTCATCCGGCTTaGCAGCCTGGTCCCCGAGCTTGGTGGGCCCATAAC | + |
|
Preference number: 4 (lower is better) Translates to: RRGSRARSAHPA*QPGPRAWWAHN Trigger: GTTATGGGCCCACCAAGCTCGGGGACCAGGCTGCAAAGCCGGATGAGCAGATCTGGCCCTGCTGCCTCTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212431.2 |
||
| 3UTR CAA 72 bp | CTTCACATAGGGGCTCAGTCCAGCCTTGTGGGGGTCTaGGCGGCGCCTAGGACCTGCAGTTTGGGTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LHIGAQSSLVGV*AAPRTCSLGPG Trigger: TCCAGGACCCAAACTGCAGGTCCTAGGCGCCGCCAAGACCCCCACAAGGCTGGACTGAGCCCCTATGTGAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212431.2 |
||
| CDS-3UTR GCA 90 bp | TATTCCTTTCCAGGCTGGGGGAAGGCAACCTGGGCAGGTCCTAAGACATGCACCGCGGCGCCTAGGACCTaGAGTTTGGGTCCTGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: YSFPGWGKATWAGPKTCTAAPRT*SLGPGW Trigger: CCATCCAGGACCCAAACTGCAGGTCCTAGGCGCCGC...GGTGCATGTCTTAGGACCTGCCCAGGTTGCCTTCCCCCAGCCTGGAAAGGAATA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040776.6 |
||
| CDS-3UTR CCA 90 bp | CCTATTCCTTTCCAGGCTGGGGGAAGGCAACCTGGGCAGGTCCTAAGACATGCACTCCTACGTGGCTCTTaGGAGAGAGGCAACCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PIPFQAGGRQPGQVLRHALLRGS*ERGNPW Trigger: CCAGGGGTTGCCTCTCTCCCAAGAGCCACGTAGGAG...TGCATGTCTTAGGACCTGCCCAGGTTGCCTTCCCCCAGCCTGGAAAGGAATAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040776.6 |
||
| CDS-3UTR CCA 90 bp | TGTGTAGGGTTCAAGATTTCCAAGGTAGGGAGAGTAGGTGCCAGGGAAGGCCTGTGCAGGCGGAGGCTGTaGCTCCAGGAAGGGGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CVGFKISKVGRVGAREGLCRRRL*LQEGGR Trigger: CCTTCCCCCTTCCTGGAGCCACAGCCTCCGCCTGCA...CAGGCCTTCCCTGGCACCTACTCTCCCTACCTTGGAAATCTTGAACCCTACACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040776.6 |
||
| CDS-3UTR CCA 90 bp | CCTATTCCTTTCCAGGCTGGGGGAAGGCAACCTGGGCAGGTCCTAAGACATGCAGCTCCGCAGCCTCGTTaGATCCTACTGCTTCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PIPFQAGGRQPGQVLRHAAPQPR*ILLLLS Trigger: CGAGAGAAGCAGTAGGATCCAACGAGGCTGCGGAGC...TGCATGTCTTAGGACCTGCCCAGGTTGCCTTCCCCCAGCCTGGAAAGGAATAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040776.6 |
||
| CDS-3UTR CCA 90 bp | CCTATTCCTTTCCAGGCTGGGGGAAGGCAACCTGGGCAGGTCCTAAGACATGCACTTCACCACTGGGTCTaGCATCACAGTGGACGATTC | + |
|
Preference number: 4 (lower is better) Translates to: PIPFQAGGRQPGQVLRHALHHWV*HHSGRF Trigger: GAATCGTCCACTGTGATGCCAGACCCAGTGGTGAAG...TGCATGTCTTAGGACCTGCCCAGGTTGCCTTCCCCCAGCCTGGAAAGGAATAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040776.6 |
||
| CDS-3UTR CCA 90 bp | CCTATTCCTTTCCAGGCTGGGGGAAGGCAACCTGGGCAGGTCCTAAGACATGCAACTCCTACTCCTACGTaGCTCTTGGGAGAGAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PIPFQAGGRQPGQVLRHATPTPT*LLGERQ Trigger: TTGCCTCTCTCCCAAGAGCCACGTAGGAGTAGGAGT...TGCATGTCTTAGGACCTGCCCAGGTTGCCTTCCCCCAGCCTGGAAAGGAATAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040776.6 |
||
| CDS-3UTR TCA 90 bp | CCTATTCCTTTCCAGGCTGGGGGAAGGCAACCTGGGCAGGTCCTAAGACATGCATCCACTGTCTCTGGCTaGCCAGGTAGAACAAAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PIPFQAGGRQPGQVLRHASTVSG*PGRTKV Trigger: TACCTTTGTTCTACCTGGTCAGCCAGAGACAGTGGA...TGCATGTCTTAGGACCTGCCCAGGTTGCCTTCCCCCAGCCTGGAAAGGAATAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040776.6 |
||
| CDS-3UTR CCA 90 bp | CCCATTTGTGAGACTTTCTTGGTGCCAGGAGATGAGGGAACCTTCATGATTGTGCTCAGTCCAGCCTTGTaGGGGTCTTGGCGGCGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: PICETFLVPGDEGTFMIVLSPAL*GSWRRL Trigger: TAGGCGCCGCCAAGACCCCCACAAGGCTGGACTGAG...CACAATCATGAAGGTTCCCTCATCTCCTGGCACCAAGAAAGTCTCACAAATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040776.6 |
||
| CDS-3UTR CCA 90 bp | GTCTTTAATTCCTATTCCTTTCCAGGCTGGGGGAAGGCAACCTGGGCAGGTCCTCTAGGACCTGCAGTTTaGGTCCTGGATGGGCACTTA | + |
|
Preference number: 4 (lower is better) Translates to: VFNSYSFPGWGKATWAGPLGPAV*VLDGHL Trigger: TAAGTGCCCATCCAGGACCCAAACTGCAGGTCCTAG...AGGACCTGCCCAGGTTGCCTTCCCCCAGCCTGGAAAGGAATAGGAATTAAAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040776.6 |
||
| CDS-3UTR TCA 90 bp | CCCATTTGTGAGACTTTCTTGGTGCCAGGAGATGAGGGAACCTTCATGATTGTGCCTGAAGATCCTTCTTaGTCCTTGGGCTCCGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PICETFLVPGDEGTFMIVPEDPS*SLGSAA Trigger: GGCTGCGGAGCCCAAGGATCAAGAAGGATCTTCAGG...CACAATCATGAAGGTTCCCTCATCTCCTGGCACCAAGAAAGTCTCACAAATGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040776.6 |
||
| CDS-3UTR TCA 90 bp | TGTAGGGTTCAAGATTTCCAAGGTAGGGAGAGTAGGTGCCAGGGAAGGCCTGGTATCTTACGGCCAGCATaGGAAGCAAATACCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CRVQDFQGRESRCQGRPGILRPA*EANTSR Trigger: CCTGGAGGTATTTGCTTCTCATGCTGGCCGTAAGAT...ACCAGGCCTTCCCTGGCACCTACTCTCCCTACCTTGGAAATCTTGAACCCTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040776.6 |
||
| CDS-3UTR TCA 90 bp | GCTAAGCTCTTCTACACATCTTGGGTCAGGCACCAGGACGGCAGACAGGCTGGAAAAACAAAAATAGATTaGTCCGAGTGCTCCGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: AKLFYTSWVRHQDGRQAGKTKID*SECSGV Trigger: GACGCCGGAGCACTCGGATCAATCTATTTTTGTTTT...TCCAGCCTGTCTGCCGTCCTGGTGCCTGACCCAAGATGTGTAGAAGAGCTTAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000212431.2 |
||
| CDS-3UTR GCA 90 bp | TGTGTAGGGTTCAAGATTTCCAAGGTAGGGAGAGTAGGTGCCAGGGAAGGCCTGAGACCGTCTTCTTTGTaGATTGATCCGAGTGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: CVGFKISKVGRVGAREGLRPSSL*IDPSAP Trigger: CGGAGCACTCGGATCAATGCACAAAGAAGACGGTCT...CAGGCCTTCCCTGGCACCTACTCTCCCTACCTTGGAAATCTTGAACCCTACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040776.6 |
||
| CDS-3UTR TCA 90 bp | CCCATTTGTGAGACTTTCTTGGTGCCAGGAGATGAGGGAACCTTCATGATTGTGGGCAGCCAAGGACTGTaGGAAAGGCTGTGTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PICETFLVPGDEGTFMIVGSQGL*ERLCVF Trigger: GAAGACACACAGCCTTTCTCACAGTCCTTGGCTGCC...CACAATCATGAAGGTTCCCTCATCTCCTGGCACCAAGAAAGTCTCACAAATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040776.6 |
||
| CDS-3UTR GCA 90 bp | ACCTGGGCAGGTCCTAAGACATGCACCACAAAGCAGAAGAACCCATTTGTGAGAGTTTCTGCTTCCTTTTaGCAGGGGCTGTTAGACCCG | + |
|
Preference number: 4 (lower is better) Translates to: TWAGPKTCTTKQKNPFVRVSASF*QGLLDP Trigger: CGGGTCTAACAGCCCCTGGCAAAAGGAAGCAGAAAC...TCTCACAAATGGGTTCTTCTGCTTTGTGGTGCATGTCTTAGGACCTGCCCAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040776.6 |
||
| CDS-3UTR GCA 90 bp | CCTATTCCTTTCCAGGCTGGGGGAAGGCAACCTGGGCAGGTCCTAAGACATGCAAGGTCATTGCAAAGGTaGTGGAAATACTTGTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: PIPFQAGGRQPGQVLRHARSLQR*WKYLSR Trigger: CCTAGACAAGTATTTCCAGCACCTTTGCAATGACCT...TGCATGTCTTAGGACCTGCCCAGGTTGCCTTCCCCCAGCCTGGAAAGGAATAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040776.6 |
||
| CDS-3UTR CCA 90 bp | GTCTTTAATTCCTATTCCTTTCCAGGCTGGGGGAAGGCAACCTGGGCAGGTCCTGCACTTGTCTTTGTTTaGCTACCCTGCCTGTTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VFNSYSFPGWGKATWAGPALVFV*LPCLLE Trigger: CTCTAACAGGCAGGGTAGCCAAACAAAGACAAGTGC...AGGACCTGCCCAGGTTGCCTTCCCCCAGCCTGGAAAGGAATAGGAATTAAAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040776.6 |
||
| CDS-3UTR CCA 90 bp | ACCTGGGCAGGTCCTAAGACATGCACCACAAAGCAGAAGAACCCATTTGTGAGAGGTCTGGCATCACAGTaGACGATTCTGGGGCAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: TWAGPKTCTTKQKNPFVRGLASQ*TILGQL Trigger: TAACTGCCCCAGAATCGTCCACTGTGATGCCAGACC...TCTCACAAATGGGTTCTTCTGCTTTGTGGTGCATGTCTTAGGACCTGCCCAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040776.6 |
||
| CDS-3UTR TCA 90 bp | GCAGGTCCTAAGACATGCACCACAAAGCAGAAGAACCCATTTGTGAGACTTTCTGTCTTCTTTGTGCATTaGTCCGAGTGCTCCGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: AGPKTCTTKQKNPFVRLSVFFVH*SECSGV Trigger: GACGCCGGAGCACTCGGATCAATGCACAAAGAAGAC...AGAAAGTCTCACAAATGGGTTCTTCTGCTTTGTGGTGCATGTCTTAGGACCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040776.6 |
||
| CDS-3UTR TCA 90 bp | TGGGCAGGTCCTAAGACATGCACCACAAAGCAGAAGAACCCATTTGTGAGACTTGCAACAGGTGTTCTGTaGCTGTCACCTGGAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: WAGPKTCTTKQKNPFVRLATGVL*LSPGRA Trigger: TGCTCTTCCAGGTGACAGTCACAGAACACCTGTTGC...AAGTCTCACAAATGGGTTCTTCTGCTTTGTGGTGCATGTCTTAGGACCTGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040776.6 |
||
| CDS-3UTR TCA 90 bp | GCAGGTCCTAAGACATGCACCACAAAGCAGAAGAACCCATTTGTGAGACTTTCTCTGTTCAGCTGGGAGTaGGTCATGTGTGCTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AGPKTCTTKQKNPFVRLSLFSWE*VMCAGG Trigger: TCCTCCAGCACACATGACTCACTCCCAGCTGAACAG...AGAAAGTCTCACAAATGGGTTCTTCTGCTTTGTGGTGCATGTCTTAGGACCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040776.6 |
||
| CDS-3UTR GCA 90 bp | TGTGTAGGGTTCAAGATTTCCAAGGTAGGGAGAGTAGGTGCCAGGGAAGGCCTGTTGTCTTCCAGATCCTaGAAAAGAGCACCAGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: CVGFKISKVGRVGAREGLLSSRS*KRAPAF Trigger: GAATGCTGGTGCTCTTTTGCAGGATCTGGAAGACAA...CAGGCCTTCCCTGGCACCTACTCTCCCTACCTTGGAAATCTTGAACCCTACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040776.6 |
||
| CDS-3UTR CCA 90 bp | GCAGGTCCTAAGACATGCACCACAAAGCAGAAGAACCCATTTGTGAGACTTTCTTGCTGGCTTCACCACTaGGTCTGGCATCACAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AGPKTCTTKQKNPFVRLSCWLHH*VWHHSG Trigger: TCCACTGTGATGCCAGACCCAGTGGTGAAGCCAGCA...AGAAAGTCTCACAAATGGGTTCTTCTGCTTTGTGGTGCATGTCTTAGGACCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040776.6 |
||
| CDS-3UTR GCA 90 bp | GCAGGTCCTAAGACATGCACCACAAAGCAGAAGAACCCATTTGTGAGACTTTCTGGAGTGAGTCATGTGTaGTGGAGGATAATTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AGPKTCTTKQKNPFVRLSGVSHV*WRIILH Trigger: GTGGAGAATTATCCTCCAGCACACATGACTCACTCC...AGAAAGTCTCACAAATGGGTTCTTCTGCTTTGTGGTGCATGTCTTAGGACCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040776.6 |
||
| CDS-3UTR GCA 90 bp | ACCTGGGCAGGTCCTAAGACATGCACCACAAAGCAGAAGAACCCATTTGTGAGAATACCTCCAGGTCATTaGAAAGGTGCTGGAAATACT | + |
|
Preference number: 4 (lower is better) Translates to: TWAGPKTCTTKQKNPFVRIPPGH*KGAGNT Trigger: AGTATTTCCAGCACCTTTGCAATGACCTGGAGGTAT...TCTCACAAATGGGTTCTTCTGCTTTGTGGTGCATGTCTTAGGACCTGCCCAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040776.6 |
||
| CDS-3UTR CCA 90 bp | ACCTGGGCAGGTCCTAAGACATGCACCACAAAGCAGAAGAACCCATTTGTGAGATCATTGCAAAGGTGCTaGAAATACTTGTCTAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TWAGPKTCTTKQKNPFVRSLQRC*KYLSRH Trigger: GTGCCTAGACAAGTATTTCCAGCACCTTTGCAATGA...TCTCACAAATGGGTTCTTCTGCTTTGTGGTGCATGTCTTAGGACCTGCCCAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040776.6 |
||
| CDS-3UTR TCA 90 bp | CCCATTTGTGAGACTTTCTTGGTGCCAGGAGATGAGGGAACCTTCATGATTGTGAGTTTCCTCATACCCTaGAGATCCTTCTTGATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PICETFLVPGDEGTFMIVSFLIP*RSFLIL Trigger: AAGGATCAAGAAGGATCTTCAGGGTATGAGGAAACT...CACAATCATGAAGGTTCCCTCATCTCCTGGCACCAAGAAAGTCTCACAAATGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040776.6 |
||
| 3UTR CAA 72 bp | AATACCTCCAGGTCATTGCAAAGGTGCTGGAAATACTaGTCTAGGCACTTCTCTACTATCTCAAGAGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: NTSRSLQRCWKY*SRHFSTISRAV Trigger: GACGGCTCTTGAGATAGTAGAGAAGTGCCTAGACAAGTATTTCCAGCACCTTTGCAATGACCTGGAGGTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212431.2 |
||
| CDS-3UTR GCA 90 bp | GCAGGTCCTAAGACATGCACCACAAAGCAGAAGAACCCATTTGTGAGACTTTCTAGAATTGCCACTGAATaGACAAGGGATAAGTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: AGPKTCTTKQKNPFVRLSRIATE*TRDKLL Trigger: CAACAACTTATCCCTTGTGCATTCAGTGGCAATTCT...AGAAAGTCTCACAAATGGGTTCTTCTGCTTTGTGGTGCATGTCTTAGGACCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040776.6 |
||
| CDS TCA 90 bp | CTTAGCAGAGTCCGGGGTGTCTGTTCCTCCAGGCGCCCACGACCTTaGACACGAGTCGATCTGCCAACTGACCTAGCTCCATGGGATTGC | + |
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Preference number: 5 (lower is better) Translates to: LSRVRGVCSSRRPRP*TRVDLPTDLAPWDC Trigger: GCAATCCCATGGAGCTAGGTCAGTTGGCAGATCGACTCGTGTTCAAGGTCGTGGGCGCCTGGAGGAACAGACACCCCGGACTCTGCTAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040776.6 |
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| CDS-3UTR CAA 90 bp | TATTCCTTTCCAGGCTGGGGGAAGGCAACCTGGGCAGGTCCTAAGACATGCACCTGCACAAGGGATAAGTaGTTGCCGGTACTCCAAGGG | + |
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Preference number: 5 (lower is better) Translates to: YSFPGWGKATWAGPKTCTCTRDK*LPVLQG Trigger: CCCTTGGAGTACCGGCAACAACTTATCCCTTGTGCA...GGTGCATGTCTTAGGACCTGCCCAGGTTGCCTTCCCCCAGCCTGGAAAGGAATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040776.6 |
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| CDS-3UTR CAA 90 bp | TGGGCAGGTCCTAAGACATGCACCACAAAGCAGAAGAACCCATTTGTGAGACTTGGCCACTTCTGGTACTaGTGCTGGCTTCACCACTGG | + |
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Preference number: 5 (lower is better) Translates to: WAGPKTCTTKQKNPFVRLGHFWY*CWLHHW Trigger: CCAGTGGTGAAGCCAGCACAAGTACCAGAAGTGGCC...AAGTCTCACAAATGGGTTCTTCTGCTTTGTGGTGCATGTCTTAGGACCTGCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040776.6 |
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| CDS-3UTR CAA 90 bp | CCCATTTGTGAGACTTTCTTGGTGCCAGGAGATGAGGGAACCTTCATGATTGTGCCTAGGACCTGCAGTTaGGGTCCTGGATGGGCACTT | + |
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Preference number: 5 (lower is better) Translates to: PICETFLVPGDEGTFMIVPRTCS*GPGWAL Trigger: AAGTGCCCATCCAGGACCCAAACTGCAGGTCCTAGG...CACAATCATGAAGGTTCCCTCATCTCCTGGCACCAAGAAAGTCTCACAAATGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040776.6 |
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| CDS-3UTR CAA 90 bp | TATTCCTTTCCAGGCTGGGGGAAGGCAACCTGGGCAGGTCCTAAGACATGCACCAATACCTCCAGGTCATaGCAAAGGTGCTGGAAATAC | + |
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Preference number: 5 (lower is better) Translates to: YSFPGWGKATWAGPKTCTNTSRS*QRCWKY Trigger: GTATTTCCAGCACCTTTGCAATGACCTGGAGGTATT...GGTGCATGTCTTAGGACCTGCCCAGGTTGCCTTCCCCCAGCCTGGAAAGGAATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040776.6 |
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| CDS-3UTR CAA 90 bp | TGTGTAGGGTTCAAGATTTCCAAGGTAGGGAGAGTAGGTGCCAGGGAAGGCCTGGCAGAGGCTAAGGAATaGTCTTCCAGATCCTGCAAA | + |
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Preference number: 5 (lower is better) Translates to: CVGFKISKVGRVGAREGLAEAKE*SSRSCK Trigger: TTTGCAGGATCTGGAAGACAATTCCTTAGCCTCTGC...CAGGCCTTCCCTGGCACCTACTCTCCCTACCTTGGAAATCTTGAACCCTACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040776.6 |
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| CDS-3UTR CAA 90 bp | GCAGGTCCTAAGACATGCACCACAAAGCAGAAGAACCCATTTGTGAGACTTTCTAGTTTCTGCTTCCTTTaGCCAGGGGCTGTTAGACCC | + |
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Preference number: 5 (lower is better) Translates to: AGPKTCTTKQKNPFVRLSSFCFL*PGAVRP Trigger: GGGTCTAACAGCCCCTGGCAAAAGGAAGCAGAAACT...AGAAAGTCTCACAAATGGGTTCTTCTGCTTTGTGGTGCATGTCTTAGGACCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040776.6 |
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| CDS-3UTR CAA 90 bp | TGGGCAGGTCCTAAGACATGCACCACAAAGCAGAAGAACCCATTTGTGAGACTTGTTAGAGTATGGCGTTaGAGACCGTCTTCTTTGTGC | + |
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Preference number: 5 (lower is better) Translates to: WAGPKTCTTKQKNPFVRLVRVWR*RPSSLC Trigger: GCACAAAGAAGACGGTCTCAAACGCCATACTCTAAC...AAGTCTCACAAATGGGTTCTTCTGCTTTGTGGTGCATGTCTTAGGACCTGCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040776.6 |
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| CDS-3UTR CAA 90 bp | ACCTGGGCAGGTCCTAAGACATGCACCACAAAGCAGAAGAACCCATTTGTGAGACAAAACAAAAATAGATaGATCCGAGTGCTCCGGCGT | + |
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Preference number: 5 (lower is better) Translates to: TWAGPKTCTTKQKNPFVRQNKNR*IRVLRR Trigger: ACGCCGGAGCACTCGGATCAATCTATTTTTGTTTTG...TCTCACAAATGGGTTCTTCTGCTTTGTGGTGCATGTCTTAGGACCTGCCCAGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212431.2 |
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| CDS TCA 72 bp | GTCCGGGGTGTCTGTTCCTCCAGGCGCCCACGACCTTaGACACGAGTCGATCTGCCAACTGACCTAGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: VRGVCSSRRPRP*TRVDLPTDLAP Trigger: TGGAGCTAGGTCAGTTGGCAGATCGACTCGTGTTCAAGGTCGTGGGCGCCTGGAGGAACAGACACCCCGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040776.6 |
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| CDS GCA 72 bp | CGAGTCGATCTGCCAACTGACCTAGCTCCATGGGATTaGTTCCTAGCACTTGTCTTTGTTTGGCTACCCTGC | + |
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Preference number: 6 (lower is better) Translates to: RVDLPTDLAPWD*FLALVFVWLPC Trigger: GCAGGGTAGCCAAACAAAGACAAGTGCTAGGAAGCAATCCCATGGAGCTAGGTCAGTTGGCAGATCGACTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040776.6 |
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| CDS CAA 72 bp | AGCTCCATGGGATTGCTTCCTAGCACTTGTCTTTGTTaGGCTACCCTGCCTGTTAGAGTATGGCGTTTGAGA | + |
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Preference number: 6 (lower is better) Translates to: SSMGLLPSTCLC*ATLPVRVWRLR Trigger: TCTCAAACGCCATACTCTAACAGGCAGGGTAGCCAAACAAAGACAAGTGCTAGGAAGCAATCCCATGGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040776.6 |
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| CDS CCA 72 bp | ACTTGTCTTTGTTTGGCTACCCTGCCTGTTAGAGTATaGCGTTTGAGACCGTCTTCTTTGTGCATTGATCCG | + |
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Preference number: 6 (lower is better) Translates to: TCLCLATLPVRV*RLRPSSLCIDP Trigger: CGGATCAATGCACAAAGAAGACGGTCTCAAACGCCATACTCTAACAGGCAGGGTAGCCAAACAAAGACAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040776.6 |
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