Pregenerated sensors for CENPN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031756Ensembl transcript IDs: ENSMUST00000034205.5, ENSMUST00000212263.2, ENSMUST00000212775.2
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCAGCAGCGGGAGGAAGGACAGGAGGTGCCTACAGAGTCAACCCATaGTCCACTTCTGTGCGTGCCAGGGTTGAGGCCAACCTGCAGCCT | + |
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Preference number: 1 (lower is better) Translates to: AAAGGRTGGAYRVNP*STSVRARVEANLQP Trigger: AGGCTGCAGGTTGGCCTCAACCCTGGCACGCACAGAAGTGGAGCATGGGTTGACTCTGTAGGCACCTCCTGTCCTTCCTCCCGCTGCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| 3UTR GCA 90 bp | GAAGGACAGGAGGTGCCTACAGAGTCAACCCATGCTCCACTTCTGTaGGTGCCAGGGTTGAGGCCAACCTGCAGCCTCCTGCGTGTGCGT | + |
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Preference number: 1 (lower is better) Translates to: EGQEVPTESTHAPLL*VPGLRPTCSLLRVR Trigger: ACGCACACGCAGGAGGCTGCAGGTTGGCCTCAACCCTGGCACGCACAGAAGTGGAGCATGGGTTGACTCTGTAGGCACCTCCTGTCCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| 3UTR GCA 90 bp | GACGGACTTCTGAGGAGAAGCAGCAGCGGGAGGAAGGACAGGAGGTaGCTACAGAGTCAACCCATGCTCCACTTCTGTGCGTGCCAGGGT | + |
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Preference number: 1 (lower is better) Translates to: DGLLRRSSSGRKDRR*LQSQPMLHFCACQG Trigger: ACCCTGGCACGCACAGAAGTGGAGCATGGGTTGACTCTGTAGGCACCTCCTGTCCTTCCTCCCGCTGCTGCTTCTCCTCAGAAGTCCGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| 3UTR GCA 90 bp | TCAACCCATGCTCCACTTCTGTGCGTGCCAGGGTTGAGGCCAACCTaGAGCCTCCTGCGTGTGCGTGCACATATTTATCACTTGTCAAAT | + |
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Preference number: 1 (lower is better) Translates to: STHAPLLCVPGLRPT*SLLRVRAHIYHLSN Trigger: ATTTGACAAGTGATAAATATGTGCACGCACACGCAGGAGGCTGCAGGTTGGCCTCAACCCTGGCACGCACAGAAGTGGAGCATGGGTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| 3UTR GCA 90 bp | CTGCAGCCTCCTGCGTGTGCGTGCACATATTTATCACTTGTCAAATaGCCACAGCTGCTGCACTTAATAGACGGGAAGAGAGAGGGCATG | + |
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Preference number: 1 (lower is better) Translates to: LQPPACACTYLSLVK*PQLLHLIDGKREGM Trigger: CATGCCCTCTCTCTTCCCGTCTATTAAGTGCAGCAGCTGTGGGCATTTGACAAGTGATAAATATGTGCACGCACACGCAGGAGGCTGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| 3UTR CCA 90 bp | CAGCCTTGCGTAGTAGCCTCCAGCTTCCCTCTGACTCTCCTAGTTTaGGGTTGGGTAGCTTCTTGGTTCTTCTGTGATCAAGGGTGTGTA | + |
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Preference number: 1 (lower is better) Translates to: QPCVVASSFPLTLLV*GWVASWFFCDQGCV Trigger: TACACACCCTTGATCACAGAAGAACCAAGAAGCTACCCAACCCCAAACTAGGAGAGTCAGAGGGAAGCTGGAGGCTACTACGCAAGGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| 3UTR CCA 90 bp | TCCAGCTTCCCTCTGACTCTCCTAGTTTGGGGTTGGGTAGCTTCTTaGTTCTTCTGTGATCAAGGGTGTGTAACAGAGATCCCACAGGGA | + |
|
Preference number: 1 (lower is better) Translates to: SSFPLTLLVWGWVAS*FFCDQGCVTEIPQG Trigger: TCCCTGTGGGATCTCTGTTACACACCCTTGATCACAGAAGAACCAAGAAGCTACCCAACCCCAAACTAGGAGAGTCAGAGGGAAGCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| 3UTR CCA 90 bp | TGCGTAGTAGCCTCCAGCTTCCCTCTGACTCTCCTAGTTTGGGGTTaGGTAGCTTCTTGGTTCTTCTGTGATCAAGGGTGTGTAACAGAG | + |
|
Preference number: 1 (lower is better) Translates to: CVVASSFPLTLLVWG*VASWFFCDQGCVTE Trigger: CTCTGTTACACACCCTTGATCACAGAAGAACCAAGAAGCTACCCAACCCCAAACTAGGAGAGTCAGAGGGAAGCTGGAGGCTACTACGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| 3UTR GCA 90 bp | ATAGAGAAGTTGTTTTACACAAAGAGGCCGTTAGATATGCAGCCTTaGGTAGTAGCCTCCAGCTTCCCTCTGACTCTCCTAGTTTGGGGT | + |
|
Preference number: 1 (lower is better) Translates to: IEKLFYTKRPLDMQP*VVASSFPLTLLVWG Trigger: ACCCCAAACTAGGAGAGTCAGAGGGAAGCTGGAGGCTACTACGCAAGGCTGCATATCTAACGGCCTCTTTGTGTAAAACAACTTCTCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTTGCGTAGTAGCCTCCAGCTTCCCTCTGACTCTCCTAGTTTGGGGTTGGGTGGGTTGAGGCCAACCTaGAGCCTCCTGCGTGTGCGT | + |
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Preference number: 2 (lower is better) Translates to: ALRSSLQLPSDSPSLGLGGLRPT*SLLRVR Trigger: ACGCACACGCAGGAGGCTGCAGGTTGGCCTCAACCC...ACCCAACCCCAAACTAGGAGAGTCAGAGGGAAGCTGGAGGCTACTACGCAAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTTCCCTCTGACTCTCCTAGTTTGGGGTTGGGTAGCTTCTTGGTTCTTCTGTTGTGCGTGCCAGGGTTaGGGCCAACCTGCAGCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: SFPLTLLVWGWVASWFFCCACQG*GQPAAS Trigger: GGAGGCTGCAGGTTGGCCTCAACCCTGGCACGCACA...ACAGAAGAACCAAGAAGCTACCCAACCCCAAACTAGGAGAGTCAGAGGGAAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCTCCAGCTTCCCTCTGACTCTCCTAGTTTGGGGTTGGGTAGCTTCTTGGTTACAGGGACGGACTTCTaGGGAGAAGCAGCAGCGGGA | + |
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Preference number: 2 (lower is better) Translates to: SLQLPSDSPSLGLGSFLVTGTDF*GEAAAG Trigger: TCCCGCTGCTGCTTCTCCTCAGAAGTCCGTCCCTGT...AACCAAGAAGCTACCCAACCCCAAACTAGGAGAGTCAGAGGGAAGCTGGAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| 3UTR-3UTR GCA 90 bp | GCCGTTAGATATGCAGCCTTGCGTAGTAGCCTCCAGCTTCCCTCTGACTCTCCTAACTGGACCTGCATGTaGAGCGGAAGCCAAGCCATA | + |
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Preference number: 2 (lower is better) Translates to: AVRYAALRSSLQLPSDSPNWTCM*SGSQAI Trigger: TATGGCTTGGCTTCCGCTGCACATGCAGGTCCAGTT...AGGAGAGTCAGAGGGAAGCTGGAGGCTACTACGCAAGGCTGCATATCTAACGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| 3UTR-3UTR GCA 90 bp | GCCGTTAGATATGCAGCCTTGCGTAGTAGCCTCCAGCTTCCCTCTGACTCTCCTAGGAAGGACAGGAGGTaGCTACAGAGTCAACCCATG | + |
|
Preference number: 2 (lower is better) Translates to: AVRYAALRSSLQLPSDSPRKDRR*LQSQPM Trigger: CATGGGTTGACTCTGTAGGCACCTCCTGTCCTTCCT...AGGAGAGTCAGAGGGAAGCTGGAGGCTACTACGCAAGGCTGCATATCTAACGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| 3UTR-3UTR GCA 90 bp | AGCTTCCCTCTGACTCTCCTAGTTTGGGGTTGGGTAGCTTCTTGGTTCTTCTGTCATGCTCCACTTCTGTaGGTGCCAGGGTTGAGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: SFPLTLLVWGWVASWFFCHAPLL*VPGLRP Trigger: TGGCCTCAACCCTGGCACGCACAGAAGTGGAGCATG...ACAGAAGAACCAAGAAGCTACCCAACCCCAAACTAGGAGAGTCAGAGGGAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| 3UTR-3UTR CCA 90 bp | GAGAAGCAGCAGCGGGAGGAAGGACAGGAGGTGCCTACAGAGTCAACCCATGCTACTGTACACAGAAGCTaGTCGGTTATAACTGGACCT | + |
|
Preference number: 2 (lower is better) Translates to: EKQQREEGQEVPTESTHATVHRS*SVITGP Trigger: AGGTCCAGTTATAACCGACCAGCTTCTGTGTACAGT...AGCATGGGTTGACTCTGTAGGCACCTCCTGTCCTTCCTCCCGCTGCTGCTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTCCAGCTTCCCTCTGACTCTCCTAGTTTGGGGTTGGGTAGCTTCTTGGTTCACTGTACACAGAAGCTaGTCGGTTATAACTGGACCT | + |
|
Preference number: 2 (lower is better) Translates to: ASSFPLTLLVWGWVASWFTVHRS*SVITGP Trigger: AGGTCCAGTTATAACCGACCAGCTTCTGTGTACAGT...GAACCAAGAAGCTACCCAACCCCAAACTAGGAGAGTCAGAGGGAAGCTGGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| 3UTR-3UTR GCA 90 bp | TGCGTAGTAGCCTCCAGCTTCCCTCTGACTCTCCTAGTTTGGGGTTGGGTAGCTTTATCACTTGTCAAATaGCCACAGCTGCTGCACTTA | + |
|
Preference number: 2 (lower is better) Translates to: CVVASSFPLTLLVWGWVALSLVK*PQLLHL Trigger: TAAGTGCAGCAGCTGTGGGCATTTGACAAGTGATAA...AGCTACCCAACCCCAAACTAGGAGAGTCAGAGGGAAGCTGGAGGCTACTACGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| 3UTR CAA 90 bp | AATAGAGAAGTTGTTTTACACAAAGAGGCCGTTAGATATGCAGCCTaGCGTAGTAGCCTCCAGCTTCCCTCTGACTCTCCTAGTTTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: NREVVLHKEAVRYAA*RSSLQLPSDSPSLG Trigger: CCCCAAACTAGGAGAGTCAGAGGGAAGCTGGAGGCTACTACGCAAGGCTGCATATCTAACGGCCTCTTTGTGTAAAACAACTTCTCTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| 3UTR TCA 72 bp | AGTCAACCCATGCTCCACTTCTGTGCGTGCCAGGGTTaGGGCCAACCTGCAGCCTCCTGCGTGTGCGTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: SQPMLHFCACQG*GQPAASCVCVH Trigger: GTGCACGCACACGCAGGAGGCTGCAGGTTGGCCTCAACCCTGGCACGCACAGAAGTGGAGCATGGGTTGACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| 3UTR-3UTR CAA 90 bp | GCCTTGCGTAGTAGCCTCCAGCTTCCCTCTGACTCTCCTAGTTTGGGGTTGGGTCTGTGCGTGCCAGGGTaGAGGCCAACCTGCAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: ALRSSLQLPSDSPSLGLGLCVPG*RPTCSL Trigger: GAGGCTGCAGGTTGGCCTCAACCCTGGCACGCACAG...ACCCAACCCCAAACTAGGAGAGTCAGAGGGAAGCTGGAGGCTACTACGCAAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| 3UTR GCA 72 bp | GAGGTGCCTACAGAGTCAACCCATGCTCCACTTCTGTaGGTGCCAGGGTTGAGGCCAACCTGCAGCCTCCTG | + |
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Preference number: 3 (lower is better) Translates to: EVPTESTHAPLL*VPGLRPTCSLL Trigger: CAGGAGGCTGCAGGTTGGCCTCAACCCTGGCACGCACAGAAGTGGAGCATGGGTTGACTCTGTAGGCACCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| 3UTR GCA 72 bp | GCTCCACTTCTGTGCGTGCCAGGGTTGAGGCCAACCTaGAGCCTCCTGCGTGTGCGTGCACATATTTATCAC | + |
|
Preference number: 3 (lower is better) Translates to: APLLCVPGLRPT*SLLRVRAHIYH Trigger: GTGATAAATATGTGCACGCACACGCAGGAGGCTGCAGGTTGGCCTCAACCCTGGCACGCACAGAAGTGGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| 3UTR-3UTR CAA 90 bp | AGCAGCAGCGGGAGGAAGGACAGGAGGTGCCTACAGAGTCAACCCATGCTCCACGCACATATTTATCACTaGTCAAATGCCCACAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: SSSGRKDRRCLQSQPMLHAHIYH*SNAHSC Trigger: GCAGCTGTGGGCATTTGACAAGTGATAAATATGTGC...GTGGAGCATGGGTTGACTCTGTAGGCACCTCCTGTCCTTCCTCCCGCTGCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| 3UTR CCA 72 bp | GCCTCCAGCTTCCCTCTGACTCTCCTAGTTTGGGGTTaGGTAGCTTCTTGGTTCTTCTGTGATCAAGGGTGT | + |
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Preference number: 3 (lower is better) Translates to: ASSFPLTLLVWG*VASWFFCDQGC Trigger: ACACCCTTGATCACAGAAGAACCAAGAAGCTACCCAACCCCAAACTAGGAGAGTCAGAGGGAAGCTGGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| 3UTR-3UTR CAA 90 bp | CGTAGTAGCCTCCAGCTTCCCTCTGACTCTCCTAGTTTGGGGTTGGGTAGCTTCGCACATATTTATCACTaGTCAAATGCCCACAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: RSSLQLPSDSPSLGLGSFAHIYH*SNAHSC Trigger: GCAGCTGTGGGCATTTGACAAGTGATAAATATGTGC...GAAGCTACCCAACCCCAAACTAGGAGAGTCAGAGGGAAGCTGGAGGCTACTACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| 3UTR TCA 72 bp | CCTAGTTTGGGGTTGGGTAGCTTCTTGGTTCTTCTGTaGTCAAGGGTGTGTAACAGAGATCCCACAGGGACG | + |
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Preference number: 3 (lower is better) Translates to: PSLGLGSFLVLL*SRVCNRDPTGT Trigger: CGTCCCTGTGGGATCTCTGTTACACACCCTTGATCACAGAAGAACCAAGAAGCTACCCAACCCCAAACTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| 3UTR CCA 72 bp | GTAGTAGCCTCCAGCTTCCCTCTGACTCTCCTAGTTTaGGGTTGGGTAGCTTCTTGGTTCTTCTGTGATCAA | + |
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Preference number: 3 (lower is better) Translates to: VVASSFPLTLLV*GWVASWFFCDQ Trigger: TTGATCACAGAAGAACCAAGAAGCTACCCAACCCCAAACTAGGAGAGTCAGAGGGAAGCTGGAGGCTACTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| 3UTR GCA 72 bp | TTGTTTTACACAAAGAGGCCGTTAGATATGCAGCCTTaGGTAGTAGCCTCCAGCTTCCCTCTGACTCTCCTA | + |
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Preference number: 3 (lower is better) Translates to: LFYTKRPLDMQP*VVASSFPLTLL Trigger: TAGGAGAGTCAGAGGGAAGCTGGAGGCTACTACGCAAGGCTGCATATCTAACGGCCTCTTTGTGTAAAACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| 3UTR CCA 72 bp | CCTCTGACTCTCCTAGTTTGGGGTTGGGTAGCTTCTTaGTTCTTCTGTGATCAAGGGTGTGTAACAGAGATC | + |
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Preference number: 3 (lower is better) Translates to: PLTLLVWGWVAS*FFCDQGCVTEI Trigger: GATCTCTGTTACACACCCTTGATCACAGAAGAACCAAGAAGCTACCCAACCCCAAACTAGGAGAGTCAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| CDS-3UTR TCA 90 bp | AAGCAGCAGCGGGAGGAAGGACAGGAGGTGCCTACAGAGTCAACCCATGCTCCATGCTCGGTATGCAGGTaGGCAGGGGAGAAAGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: KQQREEGQEVPTESTHAPCSVCR*AGEKVV Trigger: CACCACTTTCTCCCCTGCTCACCTGCATACCGAGCA...TGGAGCATGGGTTGACTCTGTAGGCACCTCCTGTCCTTCCTCCCGCTGCTGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| CDS-3UTR GCA 90 bp | AAGCAGCAGCGGGAGGAAGGACAGGAGGTGCCTACAGAGTCAACCCATGCTCCAGCTGGCGACTTTCAGTaGCTGATGGAGAAGGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: KQQREEGQEVPTESTHAPAGDFQ*LMEKGH Trigger: GTGCCCCTTCTCCATCAGGCACTGAAAGTCGCCAGC...TGGAGCATGGGTTGACTCTGTAGGCACCTCCTGTCCTTCCTCCCGCTGCTGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| CDS-3UTR TCA 90 bp | GCCTTGCGTAGTAGCCTCCAGCTTCCCTCTGACTCTCCTAGTTTGGGGTTGGGTGCGACTTTCAGTGCCTaGTGGAGAAGGGGCACAGTG | + |
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Preference number: 4 (lower is better) Translates to: ALRSSLQLPSDSPSLGLGATFSA*WRRGTV Trigger: CACTGTGCCCCTTCTCCATCAGGCACTGAAAGTCGC...ACCCAACCCCAAACTAGGAGAGTCAGAGGGAAGCTGGAGGCTACTACGCAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| CDS-3UTR GCA 90 bp | AAGCAGCAGCGGGAGGAAGGACAGGAGGTGCCTACAGAGTCAACCCATGCTCCACAGGGGAGAAAGTGGTaGATCTGCAATTCCGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: KQQREEGQEVPTESTHAPQGRKW*ICNSGW Trigger: CCAGCCGGAATTGCAGATGCACCACTTTCTCCCCTG...TGGAGCATGGGTTGACTCTGTAGGCACCTCCTGTCCTTCCTCCCGCTGCTGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| CDS-3UTR CCA 90 bp | GAGAAGCAGCAGCGGGAGGAAGGACAGGAGGTGCCTACAGAGTCAACCCATGCTGAGCAGGGGAGAAAGTaGTGCATCTGCAATTCCGGC | + |
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Preference number: 4 (lower is better) Translates to: EKQQREEGQEVPTESTHAEQGRK*CICNSG Trigger: GCCGGAATTGCAGATGCACCACTTTCTCCCCTGCTC...AGCATGGGTTGACTCTGTAGGCACCTCCTGTCCTTCCTCCCGCTGCTGCTTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| CDS-3UTR TCA 90 bp | AAGCAGCAGCGGGAGGAAGGACAGGAGGTGCCTACAGAGTCAACCCATGCTCCAGTACTGGTTTGGCTGTaGATACTGTGTTCCCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: KQQREEGQEVPTESTHAPVLVWL*ILCSPG Trigger: GCCTGGGGAACACAGTATTCACAGCCAAACCAGTAC...TGGAGCATGGGTTGACTCTGTAGGCACCTCCTGTCCTTCCTCCCGCTGCTGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| CDS-3UTR TCA 90 bp | GACAGGAGGTGCCTACAGAGTCAACCCATGCTCCACTTCTGTGCGTGCCAGGGTAACAATTGCCTTGAGTaGGTCCAGGTGCCTGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: DRRCLQSQPMLHFCACQGNNCLE*VQVPAP Trigger: AGGAGCAGGCACCTGGACTCACTCAAGGCAATTGTT...ACCCTGGCACGCACAGAAGTGGAGCATGGGTTGACTCTGTAGGCACCTCCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| CDS-3UTR TCA 90 bp | GCCTTGCGTAGTAGCCTCCAGCTTCCCTCTGACTCTCCTAGTTTGGGGTTGGGTAACAATTGCCTTGAGTaGGTCCAGGTGCCTGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: ALRSSLQLPSDSPSLGLGNNCLE*VQVPAP Trigger: AGGAGCAGGCACCTGGACTCACTCAAGGCAATTGTT...ACCCAACCCCAAACTAGGAGAGTCAGAGGGAAGCTGGAGGCTACTACGCAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| CDS-3UTR CCA 90 bp | GCCTCCAGCTTCCCTCTGACTCTCCTAGTTTGGGGTTGGGTAGCTTCTTGGTTCGAGCAGGGGAGAAAGTaGTGCATCTGCAATTCCGGC | + |
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Preference number: 4 (lower is better) Translates to: ASSFPLTLLVWGWVASWFEQGRK*CICNSG Trigger: GCCGGAATTGCAGATGCACCACTTTCTCCCCTGCTC...GAACCAAGAAGCTACCCAACCCCAAACTAGGAGAGTCAGAGGGAAGCTGGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| CDS-3UTR TCA 90 bp | TGCGTAGTAGCCTCCAGCTTCCCTCTGACTCTCCTAGTTTGGGGTTGGGTAGCTGTACTGGTTTGGCTGTaGATACTGTGTTCCCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: CVVASSFPLTLLVWGWVAVLVWL*ILCSPG Trigger: GCCTGGGGAACACAGTATTCACAGCCAAACCAGTAC...AGCTACCCAACCCCAAACTAGGAGAGTCAGAGGGAAGCTGGAGGCTACTACGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| CDS-3UTR CCA 90 bp | GAGAAGCAGCAGCGGGAGGAAGGACAGGAGGTGCCTACAGAGTCAACCCATGCTAATACACCACGAACGTaGGCTTGTACTGGTTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: EKQQREEGQEVPTESTHANTPRT*ACTGLA Trigger: AGCCAAACCAGTACAAGCCCACGTTCGTGGTGTATT...AGCATGGGTTGACTCTGTAGGCACCTCCTGTCCTTCCTCCCGCTGCTGCTTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| CDS-3UTR TCA 90 bp | AGCAGCAGCGGGAGGAAGGACAGGAGGTGCCTACAGAGTCAACCCATGCTCCACCACCTATGTTACTCTTaGACTTGGTTTCCAGCTTAT | + |
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Preference number: 4 (lower is better) Translates to: SSSGRKDRRCLQSQPMLHHLCYS*TWFPAY Trigger: ATAAGCTGGAAACCAAGTTCAAGAGTAACATAGGTG...GTGGAGCATGGGTTGACTCTGTAGGCACCTCCTGTCCTTCCTCCCGCTGCTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| CDS-3UTR TCA 90 bp | GCCAAGGATTGGCTTCTAAGACACAAGACTGTACACAGAAGCTGGTCGGTTATAGCGACTTTCAGTGCCTaGTGGAGAAGGGGCACAGTG | + |
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Preference number: 4 (lower is better) Translates to: AKDWLLRHKTVHRSWSVIATFSA*WRRGTV Trigger: CACTGTGCCCCTTCTCCATCAGGCACTGAAAGTCGC...TATAACCGACCAGCTTCTGTGTACAGTCTTGTGTCTTAGAAGCCAATCCTTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| CDS-3UTR GCA 90 bp | TGCAGTCCCAATCGTTCATTAAAAACACCGAATGTCCGACGCCAAGGATTGGCTCAGGGGAGAAAGTGGTaGATCTGCAATTCCGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: CSPNRSLKTPNVRRQGLAQGRKW*ICNSGW Trigger: CCAGCCGGAATTGCAGATGCACCACTTTCTCCCCTG...AGCCAATCCTTGGCGTCGGACATTCGGTGTTTTTAATGAACGATTGGGACTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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| CDS-3UTR CCA 90 bp | GCCGTTAGATATGCAGCCTTGCGTAGTAGCCTCCAGCTTCCCTCTGACTCTCCTAACGTGGGCTTGTACTaGTTTGGCTGTGAATACTGT | + |
|
Preference number: 4 (lower is better) Translates to: AVRYAALRSSLQLPSDSPNVGLY*FGCEYC Trigger: ACAGTATTCACAGCCAAACCAGTACAAGCCCACGTT...AGGAGAGTCAGAGGGAAGCTGGAGGCTACTACGCAAGGCTGCATATCTAACGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
||
| CDS-3UTR TCA 90 bp | GCCTTGCGTAGTAGCCTCCAGCTTCCCTCTGACTCTCCTAGTTTGGGGTTGGGTGGTTCCTTACTCATCTaGAAAACATTCCAAAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALRSSLQLPSDSPSLGLGGSLLI*KTFQSF Trigger: GAAGCTTTGGAATGTTTTTCAGATGAGTAAGGAACC...ACCCAACCCCAAACTAGGAGAGTCAGAGGGAAGCTGGAGGCTACTACGCAAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034205.5 |
||
| CDS-3UTR TCA 90 bp | AAACACCGAATGTCCGACGCCAAGGATTGGCTTCTAAGACACAAGACTGTACACGATGGCAGGAAGAAATaGAGGCATACGGAGTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KHRMSDAKDWLLRHKTVHDGRKK*RHTESG Trigger: CCCAGACTCCGTATGCCTTCATTTCTTCCTGCCATC...GTGTACAGTCTTGTGTCTTAGAAGCCAATCCTTGGCGTCGGACATTCGGTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
||
| CDS-3UTR GCA 90 bp | GATTGGCTTCTAAGACACAAGACTGTACACAGAAGCTGGTCGGTTATAACTGGAGCTGGCGACTTTCAGTaGCTGATGGAGAAGGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: DWLLRHKTVHRSWSVITGAGDFQ*LMEKGH Trigger: GTGCCCCTTCTCCATCAGGCACTGAAAGTCGCCAGC...TCCAGTTATAACCGACCAGCTTCTGTGTACAGTCTTGTGTCTTAGAAGCCAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
||
| CDS-3UTR CCA 90 bp | GCCGTTAGATATGCAGCCTTGCGTAGTAGCCTCCAGCTTCCCTCTGACTCTCCTACAGTGTTCTTCAGATaGCAGGAAGAAATGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AVRYAALRSSLQLPSDSPTVFFR*QEEMKA Trigger: TGCCTTCATTTCTTCCTGCCATCTGAAGAACACTGT...AGGAGAGTCAGAGGGAAGCTGGAGGCTACTACGCAAGGCTGCATATCTAACGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
||
| CDS-3UTR CCA 90 bp | AGCCTCCAGCTTCCCTCTGACTCTCCTAGTTTGGGGTTGGGTAGCTTCTTGGTTCCAAAAGATGTGGACTaGAGAACTTTACAAGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: SLQLPSDSPSLGLGSFLVPKDVD*RTLQGT Trigger: GGTGCCTTGTAAAGTTCTCCAGTCCACATCTTTTGG...AACCAAGAAGCTACCCAACCCCAAACTAGGAGAGTCAGAGGGAAGCTGGAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
||
| CDS-3UTR CCA 90 bp | GGAGAGATGGCATATAGGTTAAGAGCGCTTGCTGCTTTTGCAGAGGACTACAGTTACAGTTCCAGGGCATaGGAGGCTCTCTTCTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GEMAYRLRALAAFAEDYSYSSRA*EALFWL Trigger: AAGCCAGAAGAGAGCCTCCCATGCCCTGGAACTGTA...ACTGTAGTCCTCTGCAAAAGCAGCAAGCGCTCTTAACCTATATGCCATCTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212775.2 |
||
| 3UTR CAA 72 bp | GTTGTTTTACACAAAGAGGCCGTTAGATATGCAGCCTaGCGTAGTAGCCTCCAGCTTCCCTCTGACTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VVLHKEAVRYAA*RSSLQLPSDSP Trigger: AGGAGAGTCAGAGGGAAGCTGGAGGCTACTACGCAAGGCTGCATATCTAACGGCCTCTTTGTGTAAAACAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
||
| CDS-3UTR TCA 90 bp | GCCTCCAGCTTCCCTCTGACTCTCCTAGTTTGGGGTTGGGTAGCTTCTTGGTTCCACCTATGTTACTCTTaGACTTGGTTTCCAGCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: ASSFPLTLLVWGWVASWFHLCYS*TWFPAY Trigger: ATAAGCTGGAAACCAAGTTCAAGAGTAACATAGGTG...GAACCAAGAAGCTACCCAACCCCAAACTAGGAGAGTCAGAGGGAAGCTGGAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
||
| CDS-3UTR CCA 90 bp | AGCTTCCCTCTGACTCTCCTAGTTTGGGGTTGGGTAGCTTCTTGGTTCTTCTGTAATACACCACGAACGTaGGCTTGTACTGGTTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SFPLTLLVWGWVASWFFCNTPRT*ACTGLA Trigger: AGCCAAACCAGTACAAGCCCACGTTCGTGGTGTATT...ACAGAAGAACCAAGAAGCTACCCAACCCCAAACTAGGAGAGTCAGAGGGAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
||
| CDS-3UTR CCA 90 bp | GTCCGACGCCAAGGATTGGCTTCTAAGACACAAGACTGTACACAGAAGCTGGTCCCAAAAGATGTGGACTaGAGAACTTTACAAGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: VRRQGLASKTQDCTQKLVPKDVD*RTLQGT Trigger: GGTGCCTTGTAAAGTTCTCCAGTCCACATCTTTTGG...GACCAGCTTCTGTGTACAGTCTTGTGTCTTAGAAGCCAATCCTTGGCGTCGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
||
| CDS-3UTR TCA 90 bp | ATAATAGAGAAGTTGTTTTACACAAAGAGGCCGTTAGATATGCAGCCTTGCGTATGCTCGGTATGCAGGTaGGCAGGGGAGAAAGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: IIEKLFYTKRPLDMQPCVCSVCR*AGEKVV Trigger: CACCACTTTCTCCCCTGCTCACCTGCATACCGAGCA...TACGCAAGGCTGCATATCTAACGGCCTCTTTGTGTAAAACAACTTCTCTATTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
||
| CDS-3UTR TCA 90 bp | GTCCGACGCCAAGGATTGGCTTCTAAGACACAAGACTGTACACAGAAGCTGGTCTTCGTGAGTGATCTTTaGATCCAAACACATAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VRRQGLASKTQDCTQKLVFVSDL*IQTHRK Trigger: CTTTCTATGTGTTTGGATTCAAAGATCACTCACGAA...GACCAGCTTCTGTGTACAGTCTTGTGTCTTAGAAGCCAATCCTTGGCGTCGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
||
| CDS-3UTR TCA 90 bp | GTCCGACGCCAAGGATTGGCTTCTAAGACACAAGACTGTACACAGAAGCTGGTCTCTTCTGTGTTTTCGTaGGTGATCTTTGAATCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VRRQGLASKTQDCTQKLVSSVFS*VIFESK Trigger: TTTGGATTCAAAGATCACTCACGAAAACACAGAAGA...GACCAGCTTCTGTGTACAGTCTTGTGTCTTAGAAGCCAATCCTTGGCGTCGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
||
| CDS-3UTR CCA 90 bp | TGCAGTCCCAATCGTTCATTAAAAACACCGAATGTCCGACGCCAAGGATTGGCTACAGTGTTCTTCAGATaGCAGGAAGAAATGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CSPNRSLKTPNVRRQGLATVFFR*QEEMKA Trigger: TGCCTTCATTTCTTCCTGCCATCTGAAGAACACTGT...AGCCAATCCTTGGCGTCGGACATTCGGTGTTTTTAATGAACGATTGGGACTGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
||
| CDS-3UTR TCA 90 bp | GGAGAGATGGCATATAGGTTAAGAGCGCTTGCTGCTTTTGCAGAGGACTACAGTGGTTCCTTACTCATCTaGAAAACATTCCAAAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GEMAYRLRALAAFAEDYSGSLLI*KTFQSF Trigger: GAAGCTTTGGAATGTTTTTCAGATGAGTAAGGAACC...ACTGTAGTCCTCTGCAAAAGCAGCAAGCGCTCTTAACCTATATGCCATCTCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212775.2 |
||
| CDS-3UTR CCA 90 bp | GTCCGACGCCAAGGATTGGCTTCTAAGACACAAGACTGTACACAGAAGCTGGTCTTTATGGTTTGTAGTTaGTCTTCAGACAAAAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VRRQGLASKTQDCTQKLVFMVCS*SSDKKS Trigger: GGACTTTTTGTCTGAAGACCAACTACAAACCATAAA...GACCAGCTTCTGTGTACAGTCTTGTGTCTTAGAAGCCAATCCTTGGCGTCGGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034205.5 |
||
| CDS-3UTR CCA 90 bp | AAACACCGAATGTCCGACGCCAAGGATTGGCTTCTAAGACACAAGACTGTACACTCTGCTTCAGGTTTATaGTTTGTAGTTGGTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KHRMSDAKDWLLRHKTVHSASGL*FVVGLQ Trigger: CTGAAGACCAACTACAAACCATAAACCTGAAGCAGA...GTGTACAGTCTTGTGTCTTAGAAGCCAATCCTTGGCGTCGGACATTCGGTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034205.5 |
||
| CDS-3UTR CCA 90 bp | GGAGAGATGGCATATAGGTTAAGAGCGCTTGCTGCTTTTGCAGAGGACTACAGTTCTGCTTCAGGTTTATaGTTTGTAGTTGGTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GEMAYRLRALAAFAEDYSSASGL*FVVGLQ Trigger: CTGAAGACCAACTACAAACCATAAACCTGAAGCAGA...ACTGTAGTCCTCTGCAAAAGCAGCAAGCGCTCTTAACCTATATGCCATCTCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212775.2 |
||
| CDS-3UTR CCA 90 bp | GGAGAGATGGCATATAGGTTAAGAGCGCTTGCTGCTTTTGCAGAGGACTACAGTTTTATGGTTTGTAGTTaGTCTTCAGACAAAAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GEMAYRLRALAAFAEDYSFMVCS*SSDKKS Trigger: GGACTTTTTGTCTGAAGACCAACTACAAACCATAAA...ACTGTAGTCCTCTGCAAAAGCAGCAAGCGCTCTTAACCTATATGCCATCTCTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000212775.2 |
||
| CDS-3UTR TCA 90 bp | TGCACATATTTATCACTTGTCAAATGCCCACAGCTGCTGCACTTAATAGACGGGTTCGTGAGTGATCTTTaGATCCAAACACATAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: CTYLSLVKCPQLLHLIDGFVSDL*IQTHRK Trigger: CTTTCTATGTGTTTGGATTCAAAGATCACTCACGAA...CCCGTCTATTAAGTGCAGCAGCTGTGGGCATTTGACAAGTGATAAATATGTGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
||
| CDS-3UTR TCA 90 bp | AATCGTTCATTAAAAACACCGAATGTCCGACGCCAAGGATTGGCTTCTAAGACATCTTCTGTGTTTTCGTaGGTGATCTTTGAATCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NRSLKTPNVRRQGLASKTSSVFS*VIFESK Trigger: TTTGGATTCAAAGATCACTCACGAAAACACAGAAGA...TGTCTTAGAAGCCAATCCTTGGCGTCGGACATTCGGTGTTTTTAATGAACGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
||
| CDS-3UTR CAA 90 bp | GCCTCCAGCTTCCCTCTGACTCTCCTAGTTTGGGGTTGGGTAGCTTCTTGGTTCACCACGAACGTGGGCTaGTACTGGTTTGGCTGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: ASSFPLTLLVWGWVASWFTTNVG*YWFGCE Trigger: TTCACAGCCAAACCAGTACAAGCCCACGTTCGTGGT...GAACCAAGAAGCTACCCAACCCCAAACTAGGAGAGTCAGAGGGAAGCTGGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
||
| CDS-3UTR CAA 90 bp | GCCTCCAGCTTCCCTCTGACTCTCCTAGTTTGGGGTTGGGTAGCTTCTTGGTTCCCACGTCATCAAGACTaGCACGCTTGTCCTCACATA | + |
|
Preference number: 5 (lower is better) Translates to: ASSFPLTLLVWGWVASWFPRHQD*HACPHI Trigger: TATGTGAGGACAAGCGTGCAAGTCTTGATGACGTGG...GAACCAAGAAGCTACCCAACCCCAAACTAGGAGAGTCAGAGGGAAGCTGGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034205.5 |
||
| CDS TCA 90 bp | CCTGATGGAGAAGGGGCACAGTGTTCTTCAGATGGCAGGAAGAAATaGAGGCATACGGAGTCTGGGGATAATACACCACGAACGTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PDGEGAQCSSDGRKK*RHTESGDNTPRTWA Trigger: AGCCCACGTTCGTGGTGTATTATCCCCAGACTCCGTATGCCTTCATTTCTTCCTGCCATCTGAAGAACACTGTGCCCCTTCTCCATCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
||
| CDS-3UTR CAA 90 bp | GCCGTTAGATATGCAGCCTTGCGTAGTAGCCTCCAGCTTCCCTCTGACTCTCCTTGGGCTTGTACTGGTTaGGCTGTGAATACTGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: AVRYAALRSSLQLPSDSPWACTG*AVNTVF Trigger: GAACACAGTATTCACAGCCAAACCAGTACAAGCCCA...AGGAGAGTCAGAGGGAAGCTGGAGGCTACTACGCAAGGCTGCATATCTAACGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
||
| CDS-3UTR CAA 90 bp | TGCGTAGTAGCCTCCAGCTTCCCTCTGACTCTCCTAGTTTGGGGTTGGGTAGCTCTAAAAACAATTGCCTaGAGTGAGTCCAGGTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: CVVASSFPLTLLVWGWVALKTIA*SESRCL Trigger: CAGGCACCTGGACTCACTCAAGGCAATTGTTTTTAG...AGCTACCCAACCCCAAACTAGGAGAGTCAGAGGGAAGCTGGAGGCTACTACGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
||
| CDS-3UTR CAA 90 bp | AGCCTCCAGCTTCCCTCTGACTCTCCTAGTTTGGGGTTGGGTAGCTTCTTGGTTCTAAAAACAATTGCCTaGAGTGAGTCCAGGTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLQLPSDSPSLGLGSFLVLKTIA*SESRCL Trigger: CAGGCACCTGGACTCACTCAAGGCAATTGTTTTTAG...AACCAAGAAGCTACCCAACCCCAAACTAGGAGAGTCAGAGGGAAGCTGGAGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
||
| CDS-3UTR CAA 90 bp | ACCTGCAGCCTCCTGCGTGTGCGTGCACATATTTATCACTTGTCAAATGCCCACTGGGCTTGTACTGGTTaGGCTGTGAATACTGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: TCSLLRVRAHIYHLSNAHWACTG*AVNTVF Trigger: GAACACAGTATTCACAGCCAAACCAGTACAAGCCCA...GTGGGCATTTGACAAGTGATAAATATGTGCACGCACACGCAGGAGGCTGCAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
||
| CDS-3UTR CAA 90 bp | GAGAAGCAGCAGCGGGAGGAAGGACAGGAGGTGCCTACAGAGTCAACCCATGCTATGTTACTCTTGAACTaGGTTTCCAGCTTATACTGT | + |
|
Preference number: 5 (lower is better) Translates to: EKQQREEGQEVPTESTHAMLLLN*VSSLYC Trigger: ACAGTATAAGCTGGAAACCAAGTTCAAGAGTAACAT...AGCATGGGTTGACTCTGTAGGCACCTCCTGTCCTTCCTCCCGCTGCTGCTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
||
| CDS-3UTR CAA 90 bp | GGAGAGATGGCATATAGGTTAAGAGCGCTTGCTGCTTTTGCAGAGGACTACAGTCCACGTCATCAAGACTaGCACGCTTGTCCTCACATA | + |
|
Preference number: 5 (lower is better) Translates to: GEMAYRLRALAAFAEDYSPRHQD*HACPHI Trigger: TATGTGAGGACAAGCGTGCAAGTCTTGATGACGTGG...ACTGTAGTCCTCTGCAAAAGCAGCAAGCGCTCTTAACCTATATGCCATCTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212775.2 |
||
| CDS-3UTR CAA 90 bp | AGCCTCCAGCTTCCCTCTGACTCTCCTAGTTTGGGGTTGGGTAGCTTCTTGGTTATGTTACTCTTGAACTaGGTTTCCAGCTTATACTGT | + |
|
Preference number: 5 (lower is better) Translates to: SLQLPSDSPSLGLGSFLVMLLLN*VSSLYC Trigger: ACAGTATAAGCTGGAAACCAAGTTCAAGAGTAACAT...AACCAAGAAGCTACCCAACCCCAAACTAGGAGAGTCAGAGGGAAGCTGGAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
||
| CDS TCA 90 bp | ATTTTCACAGGTCTGATTATACTCTCTAAAAACAATTGCCTTGAGTaGGTCCAGGTGCCTGCTCCTCAGATCCAAATGCACAATCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: IFTGLIILSKNNCLE*VQVPAPQIQMHNLM Trigger: CATCAGATTGTGCATTTGGATCTGAGGAGCAGGCACCTGGACTCACTCAAGGCAATTGTTTTTAGAGAGTATAATCAGACCTGTGAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
||
| CDS TCA 72 bp | GCTGTGGCTGAGGGTAGGTCCCAAAGGTCTCTTGAGTaGCTCGGTGGACCCTCACTTTTTCTTCTGTGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: AVAEGRSQRSLE*LGGPSLFLLCF Trigger: AAAACACAGAAGAAAAAGTGAGGGTCCACCGAGTCACTCAAGAGACCTTTGGGACCTACCCTCAGCCACAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
||
| CDS TCA 72 bp | TCCTGTCGGCCAAGAGGCCCCCACCTATGTTACTCTTaGACTTGGTTTCCAGCTTATACTGTGCGAACTCTA | + |
|
Preference number: 6 (lower is better) Translates to: SCRPRGPHLCYS*TWFPAYTVRTL Trigger: TAGAGTTCGCACAGTATAAGCTGGAAACCAAGTTCAAGAGTAACATAGGTGGGGGCCTCTTGGCCGACAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
||
| CDS CCA 72 bp | GGATGCTCTTCATCTCACTCAGAGGGATTTTCAGGATaGTCCTCCGGAGAAACTCGGCAACATTCTCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: GCSSSHSEGFSG*SSGETRQHSPS Trigger: TGAAGGAGAATGTTGCCGAGTTTCTCCGGAGGACCATCCTGAAAATCCCTCTGAGTGAGATGAAGAGCATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212775.2 |
||
| CDS CCA 72 bp | AGGCATACGGAGTCTGGGGATAATACACCACGAACGTaGGCTTGTACTGGTTTGGCTGTGAATACTGTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: RHTESGDNTPRT*ACTGLAVNTVF Trigger: GAACACAGTATTCACAGCCAAACCAGTACAAGCCCACGTTCGTGGTGTATTATCCCCAGACTCCGTATGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
||
| CDS TCA 72 bp | GGTCTGATTATACTCTCTAAAAACAATTGCCTTGAGTaGGTCCAGGTGCCTGCTCCTCAGATCCAAATGCAC | + |
|
Preference number: 6 (lower is better) Translates to: GLIILSKNNCLE*VQVPAPQIQMH Trigger: GTGCATTTGGATCTGAGGAGCAGGCACCTGGACTCACTCAAGGCAATTGTTTTTAGAGAGTATAATCAGACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034205.5 ENSMUST00000212263.2 |
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