Pregenerated sensors for CENPJ (Mus musculus)
Ensembl gene IDs: ENSMUSG00000064128Ensembl transcript IDs: ENSMUST00000065302.8, ENSMUST00000225951.2, ENSMUST00000229861.2
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ACCCTGTCCCCAACCTCGGTGGACGGTTTGATGGTAATGTCATGCTaGTCCTCAGACTCAGTGCTACTGTCGCTGTTGGCAACGCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: TLSPTSVDGLMVMSC*SSDSVLLSLLATPS Trigger: TGATGGCGTTGCCAACAGCGACAGTAGCACTGAGTCTGAGGAGCAGCATGACATTACCATCAAACCGTCCACCGAGGTTGGGGACAGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS GCA 90 bp | AAGACCCTGTCCCCAACCTCGGTGGACGGTTTGATGGTAATGTCATaGTGCTCCTCAGACTCAGTGCTACTGTCGCTGTTGGCAACGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KTLSPTSVDGLMVMS*CSSDSVLLSLLATP Trigger: TGGCGTTGCCAACAGCGACAGTAGCACTGAGTCTGAGGAGCAGCATGACATTACCATCAAACCGTCCACCGAGGTTGGGGACAGGGTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS GCA 90 bp | GGGAATCTCACTGCAGTTACTCTGACCCCTAGGATCTGCCTGCTGTaGCTCACGCTGCTGTACAGCTTTGACAGGAGTAGAAGACAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GNLTAVTLTPRICLL*LTLLYSFDRSRRQP Trigger: AGGCTGTCTTCTACTCCTGTCAAAGCTGTACAGCAGCGTGAGGCACAGCAGGCAGATCCTAGGGGTCAGAGTAACTGCAGTGAGATTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS GCA 90 bp | CTCAGACTCAGTGCTACTGTCGCTGTTGGCAACGCCATCATCCCTTaGATCCCATTGGCTCTGGATCTCAGAAGTGCTGGTTTGGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LRLSATVAVGNAIIP*IPLALDLRSAGLEG Trigger: GCCTTCCAAACCAGCACTTCTGAGATCCAGAGCCAATGGGATGCAAGGGATGATGGCGTTGCCAACAGCGACAGTAGCACTGAGTCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS TCA 90 bp | GCCTCACGCTGCTGTACAGCTTTGACAGGAGTAGAAGACAGCCTGTaGCCGTCGCAGATCTGCTGGTCCCTTTCTAAGATTCTCAGTACA | + |
|
Preference number: 5 (lower is better) Translates to: ASRCCTALTGVEDSL*PSQICWSLSKILST Trigger: TGTACTGAGAATCTTAGAAAGGGACCAGCAGATCTGCGACGGTCACAGGCTGTCTTCTACTCCTGTCAAAGCTGTACAGCAGCGTGAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS GCA 90 bp | TTGGGTTTCGTTTTCGCTAGCAATGGTCCTTCTGCTTCCTGCAGCTaGTTCTGTCTAAGCTCCCGCTCTTCCAGTTGGATCTGCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LGFVFASNGPSASCS*FCLSSRSSSWICSS Trigger: AGAAGAGCAGATCCAACTGGAAGAGCGGGAGCTTAGACAGAAGCAGCTGCAGGAAGCAGAAGGACCATTGCTAGCGAAAACGAAACCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS GCA 90 bp | GGGGAGAGACTTTCTCTCATATTGGTCTTGGTCACTTTGGGTTTCTaGCTGAGTGAGGCAAAGCCAGCCTTGGGTCTAGCTTTACTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GERLSLILVLVTLGF*LSEAKPALGLALLS Trigger: GGACAGTAAAGCTAGACCCAAGGCTGGCTTTGCCTCACTCAGGCAGAAACCCAAAGTGACCAAGACCAATATGAGAGAAAGTCTCTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS GCA 90 bp | TGGAAAGAGGAAGTCTCTCTCTCCCCTGTGTCTTACTCCACATCTTaGAACCAGCATCCCAGGGCTTTATGCATGCAGGCACATTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: WKEEVSLSPVSYSTS*NQHPRALCMQAHFP Trigger: AGGAAAATGTGCCTGCATGCATAAAGCCCTGGGATGCTGGTTGCAAGATGTGGAGTAAGACACAGGGGAGAGAGAGACTTCCTCTTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS GCA 90 bp | GGCCATCATGTACTGGCAGGCCTTGGGACTGTTCTCCATAGCTTCTaGTCTCTTCCAGGCATCCAGTCGGAACCTTTCCATTACTTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: GHHVLAGLGTVLHSF*SLPGIQSEPFHYFY Trigger: ATAAAAGTAATGGAAAGGTTCCGACTGGATGCCTGGAAGAGAGCAGAAGCTATGGAGAACAGTCCCAAGGCCTGCCAGTACATGATGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 ENSMUST00000229861.2 |
||
| CDS CCA 90 bp | CCTCGATTTAGTATGACCCCAGCCCGAGAAGGACTGGTCATCCACTaGGTTAGGAAATTCTGCCCACTGTTTAATTCTGAAGAGGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PRFSMTPAREGLVIH*VRKFCPLFNSEEVG Trigger: GCCAACCTCTTCAGAATTAAACAGTGGGCAGAATTTCCTAACCCAGTGGATGACCAGTCCTTCTCGGGCTGGGGTCATACTAAATCGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CCA 90 bp | CCTTTGACCTGGTGTCTAAACTGTCCATCACGTTTCTTCCCCGTCTaGACTTTCAGTCCTGGTGGGGAGAGACTTTCTCTCATATTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: PLTWCLNCPSRFFPV*TFSPGGERLSLILV Trigger: GACCAATATGAGAGAAAGTCTCTCCCCACCAGGACTGAAAGTCCAGACGGGGAAGAAACGTGATGGACAGTTTAGACACCAGGTCAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CCA 90 bp | CGCCATCATCCCTTGCATCCCATTGGCTCTGGATCTCAGAAGTGCTaGTTTGGAAGGCTTTCATACTACGTTTACAGGACAGTTCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RHHPLHPIGSGSQKC*FGRLSYYVYRTVPS Trigger: TGAGGGAACTGTCCTGTAAACGTAGTATGAAAGCCTTCCAAACCAGCACTTCTGAGATCCAGAGCCAATGGGATGCAAGGGATGATGGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CCA 90 bp | CTGTCGCTGTTGGCAACGCCATCATCCCTTGCATCCCATTGGCTCTaGATCTCAGAAGTGCTGGTTTGGAAGGCTTTCATACTACGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: LSLLATPSSLASHWL*ISEVLVWKAFILRL Trigger: TAAACGTAGTATGAAAGCCTTCCAAACCAGCACTTCTGAGATCCAGAGCCAATGGGATGCAAGGGATGATGGCGTTGCCAACAGCGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CCA 90 bp | CTGTGGCACTGTGTCTGGGGTGTACCATATATGGCTTCCTCTCTGTaGATAACACCATGTTCGTATGGATTCTCCTCAAGGTCTGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LWHCVWGVPYMASSL*ITPCSYGFSSRSVH Trigger: GTGGACAGACCTTGAGGAGAATCCATACGAACATGGTGTTATCCACAGAGAGGAAGCCATATATGGTACACCCCAGACACAGTGCCACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 ENSMUST00000229861.2 |
||
| CDS TCA 90 bp | TCTTTATCAGACAGATCCAGGTCTGCGTCTCTCCATTTATCTTCCTaGGCCCCGGTGTCCCTAATAGGTCCTTTGGCATCACAGACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SLSDRSRSASLHLSS*APVSLIGPLASQTC Trigger: ACAAGTCTGTGATGCCAAAGGACCTATTAGGGACACCGGGGCTCAGGAAGATAAATGGAGAGACGCAGACCTGGATCTGTCTGATAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 ENSMUST00000229861.2 |
||
| CDS CCA 90 bp | GCAGTTTTCCTCTGCAAATGCTGTCTGTCTACTTTAGACCCAGGCTaGTCCTCTGATGGGCTCTGCGTACTTGCTAGCTTACTTTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: AVFLCKCCLSTLDPG*SSDGLCVLASLLSF Trigger: GAAAGAAAGTAAGCTAGCAAGTACGCAGAGCCCATCAGAGGACCAGCCTGGGTCTAAAGTAGACAGACAGCATTTGCAGAGGAAAACTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CCA 90 bp | TCTAAACTGTCCATCACGTTTCTTCCCCGTCTGGACTTTCAGTCCTaGTGGGGAGAGACTTTCTCTCATATTGGTCTTGGTCACTTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SKLSITFLPRLDFQS*WGETFSHIGLGHFG Trigger: CCCAAAGTGACCAAGACCAATATGAGAGAAAGTCTCTCCCCACCAGGACTGAAAGTCCAGACGGGGAAGAAACGTGATGGACAGTTTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CCA 90 bp | ATCTCTTCCCTGAGGTCTGTGTTCTCTTTGACGAGCATCTCTATCTaGCTTCTGAGGCGACTCTGTGTGCTTGACCACTTTGTTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ISSLRSVFSLTSISI*LLRRLCVLDHFVSF Trigger: GAAGGAAACAAAGTGGTCAAGCACACAGAGTCGCCTCAGAAGCCAGATAGAGATGCTCGTCAAAGAGAACACAGACCTCAGGGAAGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 ENSMUST00000229861.2 |
||
| CDS GCA 90 bp | TCTGCACACAGGTCTTTATTTATGAGAGCAGTTTTCCTCTGCAAATaGTGTCTGTCTACTTTAGACCCAGGCTGGTCCTCTGATGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SAHRSLFMRAVFLCK*CLSTLDPGWSSDGL Trigger: GAGCCCATCAGAGGACCAGCCTGGGTCTAAAGTAGACAGACAGCATTTGCAGAGGAAAACTGCTCTCATAAATAAAGACCTGTGTGCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CCA 90 bp | AAACTGTCCATCACGTTTCTTCCCCGTCTGGACTTTCAGTCCTGGTaGGGAGAGACTTTCTCTCATATTGGTCTTGGTCACTTTGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: KLSITFLPRLDFQSW*GETFSHIGLGHFGF Trigger: AAACCCAAAGTGACCAAGACCAATATGAGAGAAAGTCTCTCCCCACCAGGACTGAAAGTCCAGACGGGGAAGAAACGTGATGGACAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CCA 90 bp | TCATCCCTTGCATCCCATTGGCTCTGGATCTCAGAAGTGCTGGTTTaGAAGGCTTTCATACTACGTTTACAGGACAGTTCCCTCAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: SSLASHWLWISEVLV*KAFILRLQDSSLKP Trigger: TGGTTTGAGGGAACTGTCCTGTAAACGTAGTATGAAAGCCTTCCAAACCAGCACTTCTGAGATCCAGAGCCAATGGGATGCAAGGGATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CCA 90 bp | GTTTTGTCCAGAACACACCCTTCACTCTTACTGTGGCACTGTGTCTaGGGTGTACCATATATGGCTTCCTCTCTGTGGATAACACCATGT | + |
|
Preference number: 5 (lower is better) Translates to: VLSRTHPSLLLWHCV*GVPYMASSLWITPC Trigger: ACATGGTGTTATCCACAGAGAGGAAGCCATATATGGTACACCCCAGACACAGTGCCACAGTAAGAGTGAAGGGTGTGTTCTGGACAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 ENSMUST00000229861.2 |
||
| CDS GCA 90 bp | GGGGTTTCTGCACACAGGTCTTTATTTATGAGAGCAGTTTTCCTCTaGAAATGCTGTCTGTCTACTTTAGACCCAGGCTGGTCCTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: GVSAHRSLFMRAVFL*KCCLSTLDPGWSSD Trigger: ATCAGAGGACCAGCCTGGGTCTAAAGTAGACAGACAGCATTTGCAGAGGAAAACTGCTCTCATAAATAAAGACCTGTGTGCAGAAACCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CCA 90 bp | TGGCTTTGGTTTCAAAGAAGGGAAGAATTTTACCATCAAGTCAGATaGAGGAGGAGGGCTTATGCGCCTGTCACACTTGAAGTCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: WLWFQRREEFYHQVR*RRRAYAPVTLEVFS Trigger: GGAGAAGACTTCAAGTGTGACAGGCGCATAAGCCCTCCTCCTCCATCTGACTTGATGGTAAAATTCTTCCCTTCTTTGAAACCAAAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 ENSMUST00000229861.2 |
||
| CDS CCA 90 bp | TTTTATATTCAAGGTCTGGGAAGTTCACTTGTTGAAGAGGCTCTCTaGGCAAGGCAGCTTGTCCTTTATCGGAGCTGCCTAAATCACGAG | + |
|
Preference number: 5 (lower is better) Translates to: FYIQGLGSSLVEEAL*ARQLVLYRSCLNHE Trigger: CTCGTGATTTAGGCAGCTCCGATAAAGGACAAGCTGCCTTGCCCAGAGAGCCTCTTCAACAAGTGAACTTCCCAGACCTTGAATATAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 ENSMUST00000229861.2 |
||
| CDS GCA 90 bp | CCAGGGCTTTATGCATGCAGGCACATTTTCCTTATTACTAGCATGTaGATTTCGTTCTCCTTTGACCTGGTGTCTAAACTGTCCATCACG | + |
|
Preference number: 5 (lower is better) Translates to: PGLYACRHIFLITSM*ISFSFDLVSKLSIT Trigger: CGTGATGGACAGTTTAGACACCAGGTCAAAGGAGAACGAAATGCACATGCTAGTAATAAGGAAAATGTGCCTGCATGCATAAAGCCCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS GCA 90 bp | CACTCTAACTCGGCCAGATGTGTACTTTGTCTCTTGATGACCATTTaGATAGACAGTCTTAACAGTCCCATCGGGATACTCTCGTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: HSNSARCVLCLLMTI*IDSLNSPIGILSSL Trigger: AAGAGACGAGAGTATCCCGATGGGACTGTTAAGACTGTCTATGCAAATGGTCATCAAGAGACAAAGTACACATCTGGCCGAGTTAGAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS TCA 90 bp | TTTTCCTCTTTGTTTTTATATTCAAGGTCTGGGAAGTTCACTTGTTaGAGAGGCTCTCTGGGCAAGGCAGCTTGTCCTTTATCGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FSSLFLYSRSGKFTC*RGSLGKAACPLSEL Trigger: CAGCTCCGATAAAGGACAAGCTGCCTTGCCCAGAGAGCCTCTTCAACAAGTGAACTTCCCAGACCTTGAATATAAAAACAAAGAGGAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CCA 90 bp | TCGGGATACTCTCGTCTCTTGAACTGGGCAGTATGGAGCTCCCTTTaGCCATTATTAAATTCTATGATCTTGTTGCCATCACGTTGTACT | + |
|
Preference number: 5 (lower is better) Translates to: SGYSRLLNWAVWSSL*PLLNSMILLPSRCT Trigger: AGTACAACGTGATGGCAACAAGATCATAGAATTTAATAATGGCCAAAGGGAGCTCCATACTGCCCAGTTCAAGAGACGAGAGTATCCCGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CCA 90 bp | TTAACAGTCCCATCGGGATACTCTCGTCTCTTGAACTGGGCAGTATaGAGCTCCCTTTGGCCATTATTAAATTCTATGATCTTGTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LTVPSGYSRLLNWAV*SSLWPLLNSMILLP Trigger: TGGCAACAAGATCATAGAATTTAATAATGGCCAAAGGGAGCTCCATACTGCCCAGTTCAAGAGACGAGAGTATCCCGATGGGACTGTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS TCA 90 bp | GCAGTCTCAGTGGTTCCAATACTTTATTGTTCAGGCTTTCAACTATaGCAGACTCGTCACTGCTACACTCTTTATCAGACAGATCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: AVSVVPILYCSGFQL*QTRHCYTLYQTDPG Trigger: ACCTGGATCTGTCTGATAAAGAGTGTAGCAGTGACGAGTCTGTCATAGTTGAAAGCCTGAACAATAAAGTATTGGAACCACTGAGACTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 ENSMUST00000229861.2 |
||
| CDS TCA 90 bp | CGTTGTACTCGGACAATTGTGCCATCTGGAAAGATGCTCTCTTCTTaGCCATCAGCAAATAAAGTCTTAATGGTCTGGTCAGGAAATGTG | + |
|
Preference number: 5 (lower is better) Translates to: RCTRTIVPSGKMLSS*PSANKVLMVWSGNV Trigger: CACATTTCCTGACCAGACCATTAAGACTTTATTTGCTGATGGTCAAGAAGAGAGCATCTTTCCAGATGGCACAATTGTCCGAGTACAACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CCA 90 bp | ACATTTTCCTTATTACTAGCATGTGCATTTCGTTCTCCTTTGACCTaGTGTCTAAACTGTCCATCACGTTTCTTCCCCGTCTGGACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TFSLLLACAFRSPLT*CLNCPSRFFPVWTF Trigger: GAAAGTCCAGACGGGGAAGAAACGTGATGGACAGTTTAGACACCAGGTCAAAGGAGAACGAAATGCACATGCTAGTAATAAGGAAAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS GCA 90 bp | TGGGTGGCTTTAGCAGGGAAGCTCGTAGAAACATTTGTAGCTGCTTaGTTATCATCTGCTTCCAAAATAGGAAATCCTCGATTTAGTATG | + |
|
Preference number: 5 (lower is better) Translates to: WVALAGKLVETFVAA*LSSASKIGNPRFSM Trigger: CATACTAAATCGAGGATTTCCTATTTTGGAAGCAGATGATAAGCAAGCAGCTACAAATGTTTCTACGAGCTTCCCTGCTAAAGCCACCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS GCA 90 bp | TATCTGGGAATGTTCTTGCAGCTGCTGTGTACTTCTCAAAGACTTTaGGCTCCTTTTGTAGTTTCCTTGTCTCCTCCTTTCTATACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: YLGMFLQLLCTSQRL*APFVVSLSPPFYTL Trigger: AAGAGTATAGAAAGGAGGAGACAAGGAAACTACAAAAGGAGCGCAAAGTCTTTGAGAAGTACACAGCAGCTGCAAGAACATTCCCAGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 ENSMUST00000229861.2 |
||
| CDS GCA 90 bp | TCCTTTCTATACTCTTCTATTCGAGCCAGCTCTCTTGCTTTTTGTTaGTCAAAGTCAGCAATTTCTTTCCTCAGTTTTTCCAAGGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: SFLYSSIRASSLAFC*SKSAISFLSFSKAL Trigger: AAGTGCCTTGGAAAAACTGAGGAAAGAAATTGCTGACTTTGAGCAACAAAAAGCAAGAGAGCTGGCTCGAATAGAAGAGTATAGAAAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 ENSMUST00000229861.2 |
||
| CDS CCA 90 bp | ATCGAACACTGTCACCTGGTGGTTGATCTTGACTCAGGTTTAACTTaGATTCATTTTCCAAGTGTGAATCTAATTTTGGCTTTGGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: IEHCHLVVDLDSGLT*IHFPSVNLILALVS Trigger: TGAAACCAAAGCCAAAATTAGATTCACACTTGGAAAATGAATCCAAGTTAAACCTGAGTCAAGATCAACCACCAGGTGACAGTGTTCGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229861.2 |
||
| CDS GCA 72 bp | GCGTGCTGTGCAGACACCATGGTGAGCAGCTTCTCTTaGTCCTCCATGAGCCTCTGCAGCTGTTCCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ACCADTMVSSFS*SSMSLCSCSSC Trigger: GCAGCTGGAACAGCTGCAGAGGCTCATGGAGGAGCAAGAGAAGCTGCTCACCATGGTGTCTGCACAGCACGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CCA 72 bp | CATGCTGCTCCTCAGACTCAGTGCTACTGTCGCTGTTaGCAACGCCATCATCCCTTGCATCCCATTGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: HAAPQTQCYCRC*QRHHPLHPIGS Trigger: AGAGCCAATGGGATGCAAGGGATGATGGCGTTGCCAACAGCGACAGTAGCACTGAGTCTGAGGAGCAGCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CAA 72 bp | CAGTGCTACTGTCGCTGTTGGCAACGCCATCATCCCTaGCATCCCATTGGCTCTGGATCTCAGAAGTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: QCYCRCWQRHHP*HPIGSGSQKCW Trigger: CCAGCACTTCTGAGATCCAGAGCCAATGGGATGCAAGGGATGATGGCGTTGCCAACAGCGACAGTAGCACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CAA 72 bp | TCATGCTGCTCCTCAGACTCAGTGCTACTGTCGCTGTaGGCAACGCCATCATCCCTTGCATCCCATTGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SCCSSDSVLLSL*ATPSSLASHWL Trigger: GAGCCAATGGGATGCAAGGGATGATGGCGTTGCCAACAGCGACAGTAGCACTGAGTCTGAGGAGCAGCATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CAA 90 bp | CCTCAGACTCAGTGCTACTGTCGCTGTTGGCAACGCCATCATCCCTaGCATCCCATTGGCTCTGGATCTCAGAAGTGCTGGTTTGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: PQTQCYCRCWQRHHP*HPIGSGSQKCWFGR Trigger: CCTTCCAAACCAGCACTTCTGAGATCCAGAGCCAATGGGATGCAAGGGATGATGGCGTTGCCAACAGCGACAGTAGCACTGAGTCTGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS GCA 72 bp | AGTGCTACTGTCGCTGTTGGCAACGCCATCATCCCTTaGATCCCATTGGCTCTGGATCTCAGAAGTGCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SATVAVGNAIIP*IPLALDLRSAG Trigger: ACCAGCACTTCTGAGATCCAGAGCCAATGGGATGCAAGGGATGATGGCGTTGCCAACAGCGACAGTAGCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS GCA 72 bp | CCAACCTCGGTGGACGGTTTGATGGTAATGTCATGCTaGTCCTCAGACTCAGTGCTACTGTCGCTGTTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: PTSVDGLMVMSC*SSDSVLLSLLA Trigger: TGCCAACAGCGACAGTAGCACTGAGTCTGAGGAGCAGCATGACATTACCATCAAACCGTCCACCGAGGTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS GCA 72 bp | TCCCCAACCTCGGTGGACGGTTTGATGGTAATGTCATaGTGCTCCTCAGACTCAGTGCTACTGTCGCTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SPTSVDGLMVMS*CSSDSVLLSLL Trigger: CAACAGCGACAGTAGCACTGAGTCTGAGGAGCAGCATGACATTACCATCAAACCGTCCACCGAGGTTGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CCA 72 bp | AACCATCAGGTGACCCTGAACCCCAAGACAAGAGCATaGCCTCGCATTCACTCTCGTTCTCATGTGCGACAC | + |
|
Preference number: 6 (lower is better) Translates to: NHQVTLNPKTRA*PRIHSRSHVRH Trigger: GTGTCGCACATGAGAACGAGAGTGAATGCGAGGCCATGCTCTTGTCTTGGGGTTCAGGGTCACCTGATGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS TCA 72 bp | GACAGATCCAGGTCTGCGTCTCTCCATTTATCTTCCTaGGCCCCGGTGTCCCTAATAGGTCCTTTGGCATCA | + |
|
Preference number: 6 (lower is better) Translates to: DRSRSASLHLSS*APVSLIGPLAS Trigger: TGATGCCAAAGGACCTATTAGGGACACCGGGGCTCAGGAAGATAAATGGAGAGACGCAGACCTGGATCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 ENSMUST00000229861.2 |
||
| CDS GCA 72 bp | GTTTTCGCTAGCAATGGTCCTTCTGCTTCCTGCAGCTaGTTCTGTCTAAGCTCCCGCTCTTCCAGTTGGATC | + |
|
Preference number: 6 (lower is better) Translates to: VFASNGPSASCS*FCLSSRSSSWI Trigger: GATCCAACTGGAAGAGCGGGAGCTTAGACAGAAGCAGCTGCAGGAAGCAGAAGGACCATTGCTAGCGAAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS GCA 72 bp | GAAGTCTCTCTCTCCCCTGTGTCTTACTCCACATCTTaGAACCAGCATCCCAGGGCTTTATGCATGCAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: EVSLSPVSYSTS*NQHPRALCMQA Trigger: TGCCTGCATGCATAAAGCCCTGGGATGCTGGTTGCAAGATGTGGAGTAAGACACAGGGGAGAGAGAGACTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CCA 72 bp | CAAGGTCTGGGAAGTTCACTTGTTGAAGAGGCTCTCTaGGCAAGGCAGCTTGTCCTTTATCGGAGCTGCCTA | + |
|
Preference number: 6 (lower is better) Translates to: QGLGSSLVEEAL*ARQLVLYRSCL Trigger: TAGGCAGCTCCGATAAAGGACAAGCTGCCTTGCCCAGAGAGCCTCTTCAACAAGTGAACTTCCCAGACCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 ENSMUST00000229861.2 |
||
| CDS CAA 72 bp | CCCGGTGTCCCTAATAGGTCCTTTGGCATCACAGACTaGTGGACTATCCTCTCTGTTGCTGAAGACCCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: PGVPNRSFGITD*WTILSVAEDPV Trigger: GACAGGGTCTTCAGCAACAGAGAGGATAGTCCACAAGTCTGTGATGCCAAAGGACCTATTAGGGACACCGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 ENSMUST00000229861.2 |
||
| CDS CAA 90 bp | ATGGTAATGTCATGCTGCTCCTCAGACTCAGTGCTACTGTCGCTGTaGGCAACGCCATCATCCCTTGCATCCCATTGGCTCTGGATCTCA | + |
|
Preference number: 6 (lower is better) Translates to: MVMSCCSSDSVLLSL*ATPSSLASHWLWIS Trigger: TGAGATCCAGAGCCAATGGGATGCAAGGGATGATGGCGTTGCCAACAGCGACAGTAGCACTGAGTCTGAGGAGCAGCATGACATTACCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CAA 90 bp | GTGGAAAGAGGAAGTCTCTCTCTCCCCTGTGTCTTACTCCACATCTaGCAACCAGCATCCCAGGGCTTTATGCATGCAGGCACATTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: VERGSLSLPCVLLHI*QPASQGFMHAGTFS Trigger: GGAAAATGTGCCTGCATGCATAAAGCCCTGGGATGCTGGTTGCAAGATGTGGAGTAAGACACAGGGGAGAGAGAGACTTCCTCTTTCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CCA 72 bp | TGGTGTCTAAACTGTCCATCACGTTTCTTCCCCGTCTaGACTTTCAGTCCTGGTGGGGAGAGACTTTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: WCLNCPSRFFPV*TFSPGGERLSL Trigger: GAGAGAAAGTCTCTCCCCACCAGGACTGAAAGTCCAGACGGGGAAGAAACGTGATGGACAGTTTAGACACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CAA 72 bp | GGGGAGAGACTTTCTCTCATATTGGTCTTGGTCACTTaGGGTTTCTGCCTGAGTGAGGCAAAGCCAGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: GERLSLILVLVT*GFCLSEAKPAL Trigger: CAAGGCTGGCTTTGCCTCACTCAGGCAGAAACCCAAAGTGACCAAGACCAATATGAGAGAAAGTCTCTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CAA 72 bp | TCAGATGGAGGAGGAGGGCTTATGCGCCTGTCACACTaGAAGTCTTCTCCCTTCTTGACTGGTGCAATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SDGGGGLMRLSH*KSSPFLTGAIF Trigger: GAAGATTGCACCAGTCAAGAAGGGAGAAGACTTCAAGTGTGACAGGCGCATAAGCCCTCCTCCTCCATCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 ENSMUST00000229861.2 |
||
| CDS CAA 90 bp | GTCTTGGTCACTTTGGGTTTCTGCCTGAGTGAGGCAAAGCCAGCCTaGGGTCTAGCTTTACTGTCCTTTTTAACAGTGGGGGTTTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: VLVTLGFCLSEAKPA*GLALLSFLTVGVSA Trigger: TGCAGAAACCCCCACTGTTAAAAAGGACAGTAAAGCTAGACCCAAGGCTGGCTTTGCCTCACTCAGGCAGAAACCCAAAGTGACCAAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS TCA 72 bp | TGCTGTACAGCTTTGACAGGAGTAGAAGACAGCCTGTaGCCGTCGCAGATCTGCTGGTCCCTTTCTAAGATT | + |
|
Preference number: 6 (lower is better) Translates to: CCTALTGVEDSL*PSQICWSLSKI Trigger: AATCTTAGAAAGGGACCAGCAGATCTGCGACGGTCACAGGCTGTCTTCTACTCCTGTCAAAGCTGTACAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS GCA 72 bp | CTTTCTCTCATATTGGTCTTGGTCACTTTGGGTTTCTaGCTGAGTGAGGCAAAGCCAGCCTTGGGTCTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LSLILVLVTLGF*LSEAKPALGLA Trigger: AGCTAGACCCAAGGCTGGCTTTGCCTCACTCAGGCAGAAACCCAAAGTGACCAAGACCAATATGAGAGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CCA 72 bp | ATCACGTTTCTTCCCCGTCTGGACTTTCAGTCCTGGTaGGGAGAGACTTTCTCTCATATTGGTCTTGGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: ITFLPRLDFQSW*GETFSHIGLGH Trigger: GTGACCAAGACCAATATGAGAGAAAGTCTCTCCCCACCAGGACTGAAAGTCCAGACGGGGAAGAAACGTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CCA 72 bp | TCCATCACGTTTCTTCCCCGTCTGGACTTTCAGTCCTaGTGGGGAGAGACTTTCTCTCATATTGGTCTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SITFLPRLDFQS*WGETFSHIGLG Trigger: ACCAAGACCAATATGAGAGAAAGTCTCTCCCCACCAGGACTGAAAGTCCAGACGGGGAAGAAACGTGATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CCA 72 bp | CTGAGGTCTGTGTTCTCTTTGACGAGCATCTCTATCTaGCTTCTGAGGCGACTCTGTGTGCTTGACCACTTT | + |
|
Preference number: 6 (lower is better) Translates to: LRSVFSLTSISI*LLRRLCVLDHF Trigger: AAAGTGGTCAAGCACACAGAGTCGCCTCAGAAGCCAGATAGAGATGCTCGTCAAAGAGAACACAGACCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 ENSMUST00000229861.2 |
||
| CDS CAA 72 bp | ACTTTGGGTTTCTGCCTGAGTGAGGCAAAGCCAGCCTaGGGTCTAGCTTTACTGTCCTTTTTAACAGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: TLGFCLSEAKPA*GLALLSFLTVG Trigger: CCCCACTGTTAAAAAGGACAGTAAAGCTAGACCCAAGGCTGGCTTTGCCTCACTCAGGCAGAAACCCAAAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CAA 72 bp | ACAGTCTTAACAGTCCCATCGGGATACTCTCGTCTCTaGAACTGGGCAGTATGGAGCTCCCTTTGGCCATTA | + |
|
Preference number: 6 (lower is better) Translates to: TVLTVPSGYSRL*NWAVWSSLWPL Trigger: TAATGGCCAAAGGGAGCTCCATACTGCCCAGTTCAAGAGACGAGAGTATCCCGATGGGACTGTTAAGACTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS GCA 72 bp | CGAGAAGGACTGGTCATCCACTGGGTTAGGAAATTCTaGCCACTGTTTAATTCTGAAGAGGTTGGCATCAGG | + |
|
Preference number: 6 (lower is better) Translates to: REGLVIHWVRKF*PLFNSEEVGIR Trigger: CCTGATGCCAACCTCTTCAGAATTAAACAGTGGGCAGAATTTCCTAACCCAGTGGATGACCAGTCCTTCTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CCA 72 bp | AGTATGACCCCAGCCCGAGAAGGACTGGTCATCCACTaGGTTAGGAAATTCTGCCCACTGTTTAATTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: SMTPAREGLVIH*VRKFCPLFNSE Trigger: TTCAGAATTAAACAGTGGGCAGAATTTCCTAACCCAGTGGATGACCAGTCCTTCTCGGGCTGGGGTCATACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CCA 72 bp | GCATCCCATTGGCTCTGGATCTCAGAAGTGCTGGTTTaGAAGGCTTTCATACTACGTTTACAGGACAGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: ASHWLWISEVLV*KAFILRLQDSS Trigger: GGAACTGTCCTGTAAACGTAGTATGAAAGCCTTCCAAACCAGCACTTCTGAGATCCAGAGCCAATGGGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CCA 72 bp | AGAACACACCCTTCACTCTTACTGTGGCACTGTGTCTaGGGTGTACCATATATGGCTTCCTCTCTGTGGATA | + |
|
Preference number: 6 (lower is better) Translates to: RTHPSLLLWHCV*GVPYMASSLWI Trigger: TATCCACAGAGAGGAAGCCATATATGGTACACCCCAGACACAGTGCCACAGTAAGAGTGAAGGGTGTGTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 ENSMUST00000229861.2 |
||
| CDS CAA 72 bp | ACTCTCTCATCTGGCATGACCTGCTTCACATCACCATaGAAAAATGTAACGGTGACGCTCTTCCCATCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: TLSSGMTCFTSP*KNVTVTLFPSA Trigger: TGCGGATGGGAAGAGCGTCACCGTTACATTTTTCAATGGTGATGTGAAGCAGGTCATGCCAGATGAGAGAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CAA 90 bp | ATCATCCCTTGCATCCCATTGGCTCTGGATCTCAGAAGTGCTGGTTaGGAAGGCTTTCATACTACGTTTACAGGACAGTTCCCTCAAACC | + |
|
Preference number: 6 (lower is better) Translates to: IIPCIPLALDLRSAG*EGFHTTFTGQFPQT Trigger: GGTTTGAGGGAACTGTCCTGTAAACGTAGTATGAAAGCCTTCCAAACCAGCACTTCTGAGATCCAGAGCCAATGGGATGCAAGGGATGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CAA 90 bp | GCAGGCACATTTTCCTTATTACTAGCATGTGCATTTCGTTCTCCTTaGACCTGGTGTCTAAACTGTCCATCACGTTTCTTCCCCGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: AGTFSLLLACAFRSP*TWCLNCPSRFFPVW Trigger: CCAGACGGGGAAGAAACGTGATGGACAGTTTAGACACCAGGTCAAAGGAGAACGAAATGCACATGCTAGTAATAAGGAAAATGTGCCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CAA 90 bp | ACCATCAAGTCAGATGGAGGAGGAGGGCTTATGCGCCTGTCACACTaGAAGTCTTCTCCCTTCTTGACTGGTGCAATCTTCCTTTTTATT | + |
|
Preference number: 6 (lower is better) Translates to: TIKSDGGGGLMRLSH*KSSPFLTGAIFLFI Trigger: AATAAAAAGGAAGATTGCACCAGTCAAGAAGGGAGAAGACTTCAAGTGTGACAGGCGCATAAGCCCTCCTCCTCCATCTGACTTGATGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 ENSMUST00000229861.2 |
||
| CDS CCA 72 bp | TGTGTCTGGGGTGTACCATATATGGCTTCCTCTCTGTaGATAACACCATGTTCGTATGGATTCTCCTCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: CVWGVPYMASSL*ITPCSYGFSSR Trigger: CCTTGAGGAGAATCCATACGAACATGGTGTTATCCACAGAGAGGAAGCCATATATGGTACACCCCAGACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 ENSMUST00000229861.2 |
||
| CDS CCA 72 bp | ATTGTTTTGTCCAGAACACACCCTTCACTCTTACTGTaGCACTGTGTCTGGGGTGTACCATATATGGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: IVLSRTHPSLLL*HCVWGVPYMAS Trigger: GGAAGCCATATATGGTACACCCCAGACACAGTGCCACAGTAAGAGTGAAGGGTGTGTTCTGGACAAAACAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 ENSMUST00000229861.2 |
||
| CDS CCA 72 bp | TCTTCCCATCCGCACTCACTTCTTTCCGAGTTCCATTaGGAAACAGAACAACCCGGCGCCCATTTTTATAAA | + |
|
Preference number: 6 (lower is better) Translates to: SSHPHSLLSEFH*ETEQPGAHFYK Trigger: TTTATAAAAATGGGCGCCGGGTTGTTCTGTTTCCCAATGGAACTCGGAAAGAAGTGAGTGCGGATGGGAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CCA 72 bp | CTGGGCAGCAGCATAGTAGTAGACCACTCTCTCATCTaGCATGACCTGCTTCACATCACCATTGAAAAATGT | + |
|
Preference number: 6 (lower is better) Translates to: LGSSIVVDHSLI*HDLLHITIEKC Trigger: ACATTTTTCAATGGTGATGTGAAGCAGGTCATGCCAGATGAGAGAGTGGTCTACTACTATGCTGCTGCCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CAA 72 bp | AAACGTTGGAAGCACAGGAGTTTTCTTGGGTTGGATTaGAGTAGCTGTGTGGTGGCAGAGTTAAATCTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: KRWKHRSFLGLD*SSCVVAELNLR Trigger: CCGGAGATTTAACTCTGCCACCACACAGCTACTCAAATCCAACCCAAGAAAACTCCTGTGCTTCCAACGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CAA 72 bp | TGCATCCCATTGGCTCTGGATCTCAGAAGTGCTGGTTaGGAAGGCTTTCATACTACGTTTACAGGACAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: CIPLALDLRSAG*EGFHTTFTGQF Trigger: GAACTGTCCTGTAAACGTAGTATGAAAGCCTTCCAAACCAGCACTTCTGAGATCCAGAGCCAATGGGATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS GCA 72 bp | GCACACAGGTCTTTATTTATGAGAGCAGTTTTCCTCTaGAAATGCTGTCTGTCTACTTTAGACCCAGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: AHRSLFMRAVFL*KCCLSTLDPGW Trigger: CCAGCCTGGGTCTAAAGTAGACAGACAGCATTTGCAGAGGAAAACTGCTCTCATAAATAAAGACCTGTGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS GCA 72 bp | CCACATCTTGCAACCAGCATCCCAGGGCTTTATGCATaGAGGCACATTTTCCTTATTACTAGCATGTGCATT | + |
|
Preference number: 6 (lower is better) Translates to: PHLATSIPGLYA*RHIFLITSMCI Trigger: AATGCACATGCTAGTAATAAGGAAAATGTGCCTGCATGCATAAAGCCCTGGGATGCTGGTTGCAAGATGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS GCA 72 bp | TTCGCGCTCCTTTTTATCTGGGAATGTTCTTGCAGCTaGTGTGTACTTCTCAAAGACTTTGCGCTCCTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: FALLFIWECSCS*CVLLKDFALLL Trigger: CAAAAGGAGCGCAAAGTCTTTGAGAAGTACACAGCAGCTGCAAGAACATTCCCAGATAAAAAGGAGCGCGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 ENSMUST00000229861.2 |
||
| CDS CCA 72 bp | TATGGCTTCCTCTCTGTGGATAACACCATGTTCGTATaGATTCTCCTCAAGGTCTGTCCACGATCTTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: YGFLSVDNTMFV*ILLKVCPRSFI Trigger: GATGAAAGATCGTGGACAGACCTTGAGGAGAATCCATACGAACATGGTGTTATCCACAGAGAGGAAGCCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 ENSMUST00000229861.2 |
||
| CDS CCA 72 bp | TTGAGAAATGTAAAACTTCAAGTCCTTCTGGGTACGTaGTGTGTGTGGTCTGGGCAGCAGCATAGTAGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: LRNVKLQVLLGT*CVWSGQQHSSR Trigger: TCTACTACTATGCTGCTGCCCAGACCACACACACCACGTACCCAGAAGGACTTGAAGTTTTACATTTCTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CCA 72 bp | CCATCGGGATACTCTCGTCTCTTGAACTGGGCAGTATaGAGCTCCCTTTGGCCATTATTAAATTCTATGATC | + |
|
Preference number: 6 (lower is better) Translates to: PSGYSRLLNWAV*SSLWPLLNSMI Trigger: GATCATAGAATTTAATAATGGCCAAAGGGAGCTCCATACTGCCCAGTTCAAGAGACGAGAGTATCCCGATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CCA 72 bp | TTAACAGTCCCATCGGGATACTCTCGTCTCTTGAACTaGGCAGTATGGAGCTCCCTTTGGCCATTATTAAAT | + |
|
Preference number: 6 (lower is better) Translates to: LTVPSGYSRLLN*AVWSSLWPLLN Trigger: ATTTAATAATGGCCAAAGGGAGCTCCATACTGCCCAGTTCAAGAGACGAGAGTATCCCGATGGGACTGTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CAA 72 bp | CGGGTAAAACGTTGGAAGCACAGGAGTTTTCTTGGGTaGGATTTGAGTAGCTGTGTGGTGGCAGAGTTAAAT | + |
|
Preference number: 6 (lower is better) Translates to: RVKRWKHRSFLG*DLSSCVVAELN Trigger: ATTTAACTCTGCCACCACACAGCTACTCAAATCCAACCCAAGAAAACTCCTGTGCTTCCAACGTTTTACCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CAA 72 bp | TTATCGGAGCTGCCTAAATCACGAGGAGGCGCAGACTaGATTCTTCTAGATAGATTTCCTTGTGCTGGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: LSELPKSRGGAD*ILLDRFPCAGK Trigger: TTTGCCAGCACAAGGAAATCTATCTAGAAGAATCAAGTCTGCGCCTCCTCGTGATTTAGGCAGCTCCGATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 ENSMUST00000229861.2 |
||
| CDS CAA 90 bp | AAGTCTTCTCCCTTCTTGACTGGTGCAATCTTCCTTTTTATTGTTTaGTCCAGAACACACCCTTCACTCTTACTGTGGCACTGTGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: KSSPFLTGAIFLFIV*SRTHPSLLLWHCVW Trigger: CCAGACACAGTGCCACAGTAAGAGTGAAGGGTGTGTTCTGGACAAAACAATAAAAAGGAAGATTGCACCAGTCAAGAAGGGAGAAGACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 ENSMUST00000229861.2 |
||
| CDS CAA 90 bp | CTGCTGTGTACTTCTCAAAGACTTTGCGCTCCTTTTGTAGTTTCCTaGTCTCCTCCTTTCTATACTCTTCTATTCGAGCCAGCTCTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LLCTSQRLCAPFVVS*SPPFYTLLFEPALL Trigger: CAAGAGAGCTGGCTCGAATAGAAGAGTATAGAAAGGAGGAGACAAGGAAACTACAAAAGGAGCGCAAAGTCTTTGAGAAGTACACAGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 ENSMUST00000229861.2 |
||
| CDS CAA 90 bp | TCAAGGCCTGTATTTCTTCGCGCTCCTTTTTATCTGGGAATGTTCTaGCAGCTGCTGTGTACTTCTCAAAGACTTTGCGCTCCTTTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: SRPVFLRAPFYLGMF*QLLCTSQRLCAPFV Trigger: TACAAAAGGAGCGCAAAGTCTTTGAGAAGTACACAGCAGCTGCAAGAACATTCCCAGATAAAAAGGAGCGCGAAGAAATACAGGCCTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 ENSMUST00000229861.2 |
||
| CDS CAA 90 bp | GCTTGTCCTTTATCGGAGCTGCCTAAATCACGAGGAGGCGCAGACTaGATTCTTCTAGATAGATTTCCTTGTGCTGGCAAATACTTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: ACPLSELPKSRGGAD*ILLDRFPCAGKYFF Trigger: GAAAAAGTATTTGCCAGCACAAGGAAATCTATCTAGAAGAATCAAGTCTGCGCCTCCTCGTGATTTAGGCAGCTCCGATAAAGGACAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 ENSMUST00000229861.2 |
||
| CDS CAA 90 bp | TGGGCAGTATGGAGCTCCCTTTGGCCATTATTAAATTCTATGATCTaGTTGCCATCACGTTGTACTCGGACAATTGTGCCATCTGGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: WAVWSSLWPLLNSMI*LPSRCTRTIVPSGK Trigger: CTTTCCAGATGGCACAATTGTCCGAGTACAACGTGATGGCAACAAGATCATAGAATTTAATAATGGCCAAAGGGAGCTCCATACTGCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CAA 90 bp | ATCGGGATACTCTCGTCTCTTGAACTGGGCAGTATGGAGCTCCCTTaGGCCATTATTAAATTCTATGATCTTGTTGCCATCACGTTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: IGILSSLELGSMELP*AIIKFYDLVAITLY Trigger: GTACAACGTGATGGCAACAAGATCATAGAATTTAATAATGGCCAAAGGGAGCTCCATACTGCCCAGTTCAAGAGACGAGAGTATCCCGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CAA 90 bp | GTCTTTGTCCTTCACTCTAACTCGGCCAGATGTGTACTTTGTCTCTaGATGACCATTTGCATAGACAGTCTTAACAGTCCCATCGGGATA | + |
|
Preference number: 6 (lower is better) Translates to: VFVLHSNSARCVLCL*MTICIDSLNSPIGI Trigger: TATCCCGATGGGACTGTTAAGACTGTCTATGCAAATGGTCATCAAGAGACAAAGTACACATCTGGCCGAGTTAGAGTGAAGGACAAAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS GCA 72 bp | AGGTCTTTATTTATGAGAGCAGTTTTCCTCTGCAAATaGTGTCTGTCTACTTTAGACCCAGGCTGGTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RSLFMRAVFLCK*CLSTLDPGWSS Trigger: AGAGGACCAGCCTGGGTCTAAAGTAGACAGACAGCATTTGCAGAGGAAAACTGCTCTCATAAATAAAGACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CCA 72 bp | TTATTACTAGCATGTGCATTTCGTTCTCCTTTGACCTaGTGTCTAAACTGTCCATCACGTTTCTTCCCCGTC | + |
|
Preference number: 6 (lower is better) Translates to: LLLACAFRSPLT*CLNCPSRFFPV Trigger: GACGGGGAAGAAACGTGATGGACAGTTTAGACACCAGGTCAAAGGAGAACGAAATGCACATGCTAGTAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CCA 72 bp | TTTCAAAGAAGGGAAGAATTTTACCATCAAGTCAGATaGAGGAGGAGGGCTTATGCGCCTGTCACACTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: FQRREEFYHQVR*RRRAYAPVTLE Trigger: TTCAAGTGTGACAGGCGCATAAGCCCTCCTCCTCCATCTGACTTGATGGTAAAATTCTTCCCTTCTTTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 ENSMUST00000229861.2 |
||
| CDS CAA 72 bp | GTATTTCTTCGCGCTCCTTTTTATCTGGGAATGTTCTaGCAGCTGCTGTGTACTTCTCAAAGACTTTGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: VFLRAPFYLGMF*QLLCTSQRLCA Trigger: AGCGCAAAGTCTTTGAGAAGTACACAGCAGCTGCAAGAACATTCCCAGATAAAAAGGAGCGCGAAGAAATAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 ENSMUST00000229861.2 |
||
| CDS CAA 72 bp | GAAATTGAAATGATGAGTTCATGGACTCATCCTTTTTaGTGGCCATCATGTACTGGCAGGCCTTGGGACTGT | + |
|
Preference number: 6 (lower is better) Translates to: EIEMMSSWTHPF*WPSCTGRPWDC Trigger: ACAGTCCCAAGGCCTGCCAGTACATGATGGCCACAAAAAAGGATGAGTCCATGAACTCATCATTTCAATTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 ENSMUST00000229861.2 |
||
| CDS CAA 72 bp | CTTCACTCTAACTCGGCCAGATGTGTACTTTGTCTCTaGATGACCATTTGCATAGACAGTCTTAACAGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: LHSNSARCVLCL*MTICIDSLNSP Trigger: GGGACTGTTAAGACTGTCTATGCAAATGGTCATCAAGAGACAAAGTACACATCTGGCCGAGTTAGAGTGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CAA 90 bp | TTTTTCCTCTTTGTTTTTATATTCAAGGTCTGGGAAGTTCACTTGTaGAAGAGGCTCTCTGGGCAAGGCAGCTTGTCCTTTATCGGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: FFLFVFIFKVWEVHL*KRLSGQGSLSFIGA Trigger: AGCTCCGATAAAGGACAAGCTGCCTTGCCCAGAGAGCCTCTTCAACAAGTGAACTTCCCAGACCTTGAATATAAAAACAAAGAGGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS TCA 72 bp | CGGACAATTGTGCCATCTGGAAAGATGCTCTCTTCTTaGCCATCAGCAAATAAAGTCTTAATGGTCTGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: RTIVPSGKMLSS*PSANKVLMVWS Trigger: TGACCAGACCATTAAGACTTTATTTGCTGATGGTCAAGAAGAGAGCATCTTTCCAGATGGCACAATTGTCCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CAA 72 bp | GCTCTACAGAAATTACTCTGTTCATCGGGTAAAACGTaGGAAGCACAGGAGTTTTCTTGGGTTGGATTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: ALQKLLCSSGKT*EAQEFSWVGFE Trigger: CTCAAATCCAACCCAAGAAAACTCCTGTGCTTCCAACGTTTTACCCGATGAACAGAGTAATTTCTGTAGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CAA 72 bp | TTTGTTTTTATATTCAAGGTCTGGGAAGTTCACTTGTaGAAGAGGCTCTCTGGGCAAGGCAGCTTGTCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: FVFIFKVWEVHL*KRLSGQGSLSF Trigger: AAAGGACAAGCTGCCTTGCCCAGAGAGCCTCTTCAACAAGTGAACTTCCCAGACCTTGAATATAAAAACAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CAA 72 bp | TGGAGCTCCCTTTGGCCATTATTAAATTCTATGATCTaGTTGCCATCACGTTGTACTCGGACAATTGTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: WSSLWPLLNSMI*LPSRCTRTIVP Trigger: TGGCACAATTGTCCGAGTACAACGTGATGGCAACAAGATCATAGAATTTAATAATGGCCAAAGGGAGCTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CAA 90 bp | CTCCTCCTTTCTATACTCTTCTATTCGAGCCAGCTCTCTTGCTTTTaGTTGCTCAAAGTCAGCAATTTCTTTCCTCAGTTTTTCCAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LLLSILFYSSQLSCF*LLKVSNFFPQFFQG Trigger: GCCTTGGAAAAACTGAGGAAAGAAATTGCTGACTTTGAGCAACAAAAAGCAAGAGAGCTGGCTCGAATAGAAGAGTATAGAAAGGAGGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 ENSMUST00000229861.2 |
||
| CDS CAA 90 bp | TTATCTGGGAATGTTCTTGCAGCTGCTGTGTACTTCTCAAAGACTTaGCGCTCCTTTTGTAGTTTCCTTGTCTCCTCCTTTCTATACTCT | + |
|
Preference number: 6 (lower is better) Translates to: LSGNVLAAAVYFSKT*RSFCSFLVSSFLYS Trigger: AGAGTATAGAAAGGAGGAGACAAGGAAACTACAAAAGGAGCGCAAAGTCTTTGAGAAGTACACAGCAGCTGCAAGAACATTCCCAGATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 ENSMUST00000229861.2 |
||
| CDS CAA 90 bp | CTCCCTTTGGCCATTATTAAATTCTATGATCTTGTTGCCATCACGTaGTACTCGGACAATTGTGCCATCTGGAAAGATGCTCTCTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LPLAIIKFYDLVAIT*YSDNCAIWKDALFL Trigger: CAAGAAGAGAGCATCTTTCCAGATGGCACAATTGTCCGAGTACAACGTGATGGCAACAAGATCATAGAATTTAATAATGGCCAAAGGGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CCA 72 bp | AATTTTACTCCCAGCTTGAGAGGAGGGCAGTCTCAGTaGTTCCAATACTTTATTGTTCAGGCTTTCAACTAT | + |
|
Preference number: 6 (lower is better) Translates to: NFTPSLRGGQSQ*FQYFIVQAFNY Trigger: ATAGTTGAAAGCCTGAACAATAAAGTATTGGAACCACTGAGACTGCCCTCCTCTCAAGCTGGGAGTAAAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 ENSMUST00000229861.2 |
||
| CDS CAA 72 bp | TCCTCAAATGTCTGCTGCTTCTCTCTAACAGCAGCTTaGATGGGCCTTTCATCAATATTAACCACTTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: SSNVCCFSLTAA*MGLSSILTTSE Trigger: TTCAGAAGTGGTTAATATTGATGAAAGGCCCATCAAAGCTGCTGTTAGAGAGAAGCAGCAGACATTTGAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CAA 72 bp | CCTCCTTTCTATACTCTTCTATTCGAGCCAGCTCTCTaGCTTTTTGTTGCTCAAAGTCAGCAATTTCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: PPFYTLLFEPAL*LFVAQSQQFLS Trigger: GGAAAGAAATTGCTGACTTTGAGCAACAAAAAGCAAGAGAGCTGGCTCGAATAGAAGAGTATAGAAAGGAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 ENSMUST00000229861.2 |
||
| CDS CAA 72 bp | ACTTCTCAAAGACTTTGCGCTCCTTTTGTAGTTTCCTaGTCTCCTCCTTTCTATACTCTTCTATTCGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: TSQRLCAPFVVS*SPPFYTLLFEP Trigger: TGGCTCGAATAGAAGAGTATAGAAAGGAGGAGACAAGGAAACTACAAAAGGAGCGCAAAGTCTTTGAGAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 ENSMUST00000229861.2 |
||
| CDS TCA 72 bp | GTGGTTCCAATACTTTATTGTTCAGGCTTTCAACTATaGCAGACTCGTCACTGCTACACTCTTTATCAGACA | + |
|
Preference number: 6 (lower is better) Translates to: VVPILYCSGFQL*QTRHCYTLYQT Trigger: TGTCTGATAAAGAGTGTAGCAGTGACGAGTCTGTCATAGTTGAAAGCCTGAACAATAAAGTATTGGAACCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 ENSMUST00000229861.2 |
||
| CDS CAA 72 bp | TTTTCCTTATTACTAGCATGTGCATTTCGTTCTCCTTaGACCTGGTGTCTAAACTGTCCATCACGTTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: FSLLLACAFRSP*TWCLNCPSRFF Trigger: GAAGAAACGTGATGGACAGTTTAGACACCAGGTCAAAGGAGAACGAAATGCACATGCTAGTAATAAGGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CAA 72 bp | GCCATTATTAAATTCTATGATCTTGTTGCCATCACGTaGTACTCGGACAATTGTGCCATCTGGAAAGATGCT | + |
|
Preference number: 6 (lower is better) Translates to: AIIKFYDLVAIT*YSDNCAIWKDA Trigger: AGCATCTTTCCAGATGGCACAATTGTCCGAGTACAACGTGATGGCAACAAGATCATAGAATTTAATAATGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS TCA 72 bp | TTTTTATTAGCCACTTCTTTGAATTCACTCTCGAGATaGGGCGTAAGATCATTGTTGTTATCCTCCTGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: FLLATSLNSLSR*GVRSLLLSSWH Trigger: ATGCCAGGAGGATAACAACAATGATCTTACGCCTCATCTCGAGAGTGAATTCAAAGAAGTGGCTAATAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CCA 72 bp | TCCTCTTCACTACTAATACTGAAGCTATTTGAAAAATaGGTGGCTTTAGCAGGGAAGCTCGTAGAAACATTT | + |
|
Preference number: 6 (lower is better) Translates to: SSSLLILKLFEK*VALAGKLVETF Trigger: AAATGTTTCTACGAGCTTCCCTGCTAAAGCCACCCATTTTTCAAATAGCTTCAGTATTAGTAGTGAAGAGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||
| CDS CCA 72 bp | TGTCACCTGGTGGTTGATCTTGACTCAGGTTTAACTTaGATTCATTTTCCAAGTGTGAATCTAATTTTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: CHLVVDLDSGLT*IHFPSVNLILA Trigger: AGCCAAAATTAGATTCACACTTGGAAAATGAATCCAAGTTAAACCTGAGTCAAGATCAACCACCAGGTGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229861.2 |
||
| CDS CAA 72 bp | GATACTGTGACTCGTAAAACAAATCCGAAGCATTTTTaGAAGTTAATACGGAATCTTGAGTGGCTCTACAGA | + |
|
Preference number: 6 (lower is better) Translates to: DTVTRKTNPKHF*KLIRNLEWLYR Trigger: TCTGTAGAGCCACTCAAGATTCCGTATTAACTTCAAAAAATGCTTCGGATTTGTTTTACGAGTCACAGTATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065302.8 ENSMUST00000225951.2 |
||