Pregenerated sensors for CDH7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026312Ensembl transcript IDs: ENSMUST00000027542.13, ENSMUST00000112701.8, ENSMUST00000129923.2, ENSMUST00000131464.8, ENSMUST00000134301.2, ENSMUST00000137092.8, ENSMUST00000145188.2, ENSMUST00000146282.3, ENSMUST00000172005.8
Found 330 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGGGCTGTTGGAAGAATCTGGGTCATGAGCTGCTACAGTGCCAATaGTATGCCCCACCTGTGTCGCTTCTGACACCTCCATGGGATACA | + |
|
Preference number: 1 (lower is better) Translates to: QGCWKNLGHELLQCQ*YAPPVSLLTPPWDT Trigger: TGTATCCCATGGAGGTGTCAGAAGCGACACAGGTGGGGCATATCATTGGCACTGTAGCAGCTCATGACCCAGATTCTTCCAACAGCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR GCA 90 bp | GGCCACGTAGCCTCTCCCCACCTGGGATGGATTCTGGCTCTCCATTaGAAGGACTGTAATGTTATGAACCGCATTTGTCTCTCGATCCAA | + |
|
Preference number: 1 (lower is better) Translates to: GHVASPHLGWILALH*KDCNVMNRICLSIQ Trigger: TTGGATCGAGAGACAAATGCGGTTCATAACATTACAGTCCTTGCAATGGAGAGCCAGAATCCATCCCAGGTGGGGAGAGGCTACGTGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR CCA 90 bp | AATATCCAGTATAGTAATGGCCACGTAGCCTCTCCCCACCTGGGATaGATTCTGGCTCTCCATTGCAAGGACTGTAATGTTATGAACCGC | + |
|
Preference number: 1 (lower is better) Translates to: NIQYSNGHVASPHLG*ILALHCKDCNVMNR Trigger: GCGGTTCATAACATTACAGTCCTTGCAATGGAGAGCCAGAATCCATCCCAGGTGGGGAGAGGCTACGTGGCCATTACTATACTGGATATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR TCA 90 bp | TTTCGAATGGTGTACCAGGCACTATTATTCTTACAGAGGGTACCATaGAAGTTAGATCCAGGTGCCTTTGGCTCCCTGACAACACAGGAC | + |
|
Preference number: 1 (lower is better) Translates to: FRMVYQALLFLQRVP*KLDPGAFGSLTTQD Trigger: GTCCTGTGTTGTCAGGGAGCCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAGAATAATAGTGCCTGGTACACCATTCGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000131464.8 ENSMUST00000172005.8 |
||
| 3UTR GCA 90 bp | GGCACTATTATTCTTACAGAGGGTACCATGAAAGTTAGATCCAGGTaGCTTTGGCTCCCTGACAACACAGGACATTACTTTATCAGGCAG | + |
|
Preference number: 1 (lower is better) Translates to: GTIILTEGTMKVRSR*LWLPDNTGHYFIRQ Trigger: CTGCCTGATAAAGTAATGTCCTGTGTTGTCAGGGAGCCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAGAATAATAGTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000131464.8 ENSMUST00000172005.8 |
||
| 3UTR CCA 90 bp | ATTATTCTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTaGCTCCCTGACAACACAGGACATTACTTTATCAGGCAGGTTAGG | + |
|
Preference number: 1 (lower is better) Translates to: IILTEGTMKVRSRCL*LPDNTGHYFIRQVR Trigger: CCTAACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAGGGAGCCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAGAATAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000131464.8 ENSMUST00000172005.8 |
||
| 3UTR TCA 90 bp | TGCAAGGACTGTAATGTTATGAACCGCATTTGTCTCTCGATCCAATaGTTTGGCAGTAGTAATAACTCCACTGTTGGCATCAATATTGAA | + |
|
Preference number: 1 (lower is better) Translates to: CKDCNVMNRICLSIQ*FGSSNNSTVGINIE Trigger: TTCAATATTGATGCCAACAGTGGAGTTATTACTACTGCCAAATCATTGGATCGAGAGACAAATGCGGTTCATAACATTACAGTCCTTGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR TCA 90 bp | GAGATGCATGTGTATGTATTTGTGGAGGTTTGTATACATGAATGTTaGTGTAGTGCCATGGCTCCAGAAATTTTTAAACTGCTCTACTTG | + |
|
Preference number: 1 (lower is better) Translates to: EMHVYVFVEVCIHEC*CSAMAPEIFKLLYL Trigger: CAAGTAGAGCAGTTTAAAAATTTCTGGAGCCATGGCACTACATCAACATTCATGTATACAAACCTCCACAAATACATACACATGCATCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR TCA 90 bp | TCCTATATAGCTTCTTCTCACTTAACTAGCAGAGAAATTCAGTTCTaGTTTCTTCTCCAAAGGAGGACTTCTAGAACACAATTCATACAC | + |
|
Preference number: 1 (lower is better) Translates to: SYIASSHLTSREIQF*FLLQRRTSRTQFIH Trigger: GTGTATGAATTGTGTTCTAGAAGTCCTCCTTTGGAGAAGAAATCAGAACTGAATTTCTCTGCTAGTTAAGTGAGAAGAAGCTATATAGGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112701.8 |
||
| 3UTR TCA 90 bp | GATAATAAACTGATTGTTCCTGTCTTCGGAAGCCATTTCTTCTCGTaGGTATTGAGGCTGTATTGTCTTTGTTATCTTTCAATGAAAAGT | + |
|
Preference number: 1 (lower is better) Translates to: DNKLIVPVFGSHFFS*VLRLYCLCYLSMKS Trigger: ACTTTTCATTGAAAGATAACAAAGACAATACAGCCTCAATACTCACGAGAAGAAATGGCTTCCGAAGACAGGAACAATCAGTTTATTATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR GCA 90 bp | CTGCCCCATACCACTAGATACATACACCATGAGCTGATCATCATTTaGCTAATAGCATCTACAACTGAATTTTATTCATATTCCTATTTT | + |
|
Preference number: 1 (lower is better) Translates to: LPHTTRYIHHELIII*LIASTTEFYSYSYF Trigger: AAAATAGGAATATGAATAAAATTCAGTTGTAGATGCTATTAGGCAAATGATGATCAGCTCATGGTGTATGTATCTAGTGGTATGGGGCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000137092.8 ENSMUST00000146282.3 |
||
| 3UTR-3UTR TCA 90 bp | GTTAGATCCAGGTGCCTTTGGCTCCCTGACAACACAGGACATTACTTTATCAGGCCACAGGCTTGTTGGTaGGTCTGTCCAGAGCTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: VRSRCLWLPDNTGHYFIRPQACW*VCPELG Trigger: CCCAAGCTCTGGACAGACTCACCAACAAGCCTGTGG...CCTGATAAAGTAATGTCCTGTGTTGTCAGGGAGCCAAAGGCACCTGGATCTAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTGACAACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGCAGGTATGACAGTCCGCCATTTTaGCCAACCATATCCTTTGCC | + |
|
Preference number: 2 (lower is better) Translates to: PDNTGHYFIRQVRCLCRYDSPPF*PTISFA Trigger: GGCAAAGGATATGGTTGGTCAAAATGGCGGACTGTC...ATACCTGCAAAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGACAACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGCAGGTATATGCAGGTCTGGGCTATaGCATCAGCATCACAGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: LTTQDITLSGRLGAFAGICRSGL*HQHHSH Trigger: GTGACTGTGATGCTGATGGCATAGCCCAGACCTGCA...TATACCTGCAAAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR-3UTR GCA 90 bp | ATATGGTGGAGCCCCTGGATCCACATCAGCTTCTTTCAGTCTTTCCCAAATAAAGACACAGGCCAGTATTaGTATCAAGGCCCCAGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: IWWSPWIHISFFQSFPNKDTGQY*YQGPSA Trigger: AGCACTGGGGCCTTGATAGCAATACTGGCCTGTGTC...TTTATTTGGGAAAGACTGAAAGAAGCTGATGTGGATCCAGGGGCTCCACCATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR-3UTR CCA 90 bp | GTGCATTCCAAAGTAAGGGTCCAAGGCTATGAGTACAAACTCTCTTGGCCATTTCTGGATAACCTGCCCTaGCTGAGCGTTTTCACAGAC | + |
|
Preference number: 2 (lower is better) Translates to: VHSKVRVQGYEYKLSWPFLDNLP*LSVFTD Trigger: GTCTGTGAAAACGCTCAGCCAGGGCAGGTTATCCAG...AAATGGCCAAGAGAGTTTGTACTCATAGCCTTGGACCCTTACTTTGGAATGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR-3UTR TCA 90 bp | ATATGGTGGAGCCCCTGGATCCACATCAGCTTCTTTCAGTCTTTCCCAAATAAAGTGCCTTTGGCTCCCTaGCAACACAGGACATTACTT | + |
|
Preference number: 2 (lower is better) Translates to: IWWSPWIHISFFQSFPNKVPLAP*QHRTLL Trigger: AAGTAATGTCCTGTGTTGTCAGGGAGCCAAAGGCAC...TTTATTTGGGAAAGACTGAAAGAAGCTGATGTGGATCCAGGGGCTCCACCATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTGGCTCCCTGACAACCAGGTTAGGTGCCTTTaGAGGTATATGAAAGTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: LTEGTMKVRSRCLWLPDNQVRCL*RYMKVA Trigger: AGCAACTTTCATATACCTGCAAAGGCACCTAACCTG...GTTGTCAGGGAGCCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000131464.8 ENSMUST00000172005.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTGGCTCCCTGACAACATCAGGCAGGTTAGGTaGCTTTGCAGGTATATGAAA | + |
|
Preference number: 2 (lower is better) Translates to: LTEGTMKVRSRCLWLPDNIRQVR*LCRYMK Trigger: TTTCATATACCTGCAAAGGCACCTAACCTGCCTGAT...GTTGTCAGGGAGCCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000131464.8 ENSMUST00000172005.8 |
||
| 3UTR CAA 90 bp | GCTATGCCATCAGCATCACAGTCACATACACGGATGGTAAGTGTGTaGGTACTGCTTAGTGAAGGAGATCCACTGTCCACAATGAAAATG | + |
|
Preference number: 2 (lower is better) Translates to: AMPSASQSHTRMVSV*VLLSEGDPLSTMKM Trigger: CATTTTCATTGTGGACAGTGGATCTCCTTCACTAAGCAGTACCAACACACTTACCATCCGTGTATGTGACTGTGATGCTGATGGCATAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR-3UTR TCA 90 bp | AATGTGTTTAGAGCAAAGAAGGCTGAGCAACAGGTCCTTGAAAGTCTTTGGAGCGCAGTAAGAACAACCTaGACTGAGTGGAGACTTGAG | + |
|
Preference number: 2 (lower is better) Translates to: NVFRAKKAEQQVLESLWSAVRTT*TEWRLE Trigger: CTCAAGTCTCCACTCAGTTCAGGTTGTTCTTACTGC...GCTCCAAAGACTTTCAAGGACCTGTTGCTCAGCCTTCTTTGCTCTAAACACATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112701.8 |
||
| 3UTR-3UTR TCA 90 bp | AGAGCTGCAGAGCCACACACACAAGGATCGTTATGCTTTGCTGTTCAGTCAGTCCAGAATATATGGCATTaGTGTTCTGTATTGCCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: RAAEPHTQGSLCFAVQSVQNIWH*CSVLPL Trigger: CAGAGGCAATACAGAACATCAATGCCATATATTCTG...GACTGACTGAACAGCAAAGCATAACGATCCTTGTGTGTGTGGCTCTGCAGCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146282.3 |
||
| 3UTR-3UTR CCA 90 bp | GAGCGTTTTCACAGACAGTGGTTTCATAGTCCATGGCGAACTCAGGTGCGTTGTATGACAAGCAAATACTaGTCTTTAGCCTCTCTATCC | + |
|
Preference number: 2 (lower is better) Translates to: ERFHRQWFHSPWRTQVRCMTSKY*SLASLS Trigger: GGATAGAGAGGCTAAAGACCAGTATTTGCTTGTCAT...ACAACGCACCTGAGTTCGCCATGGACTATGAAACCACTGTCTGTGAAAACGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTGACAACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGCAGGTATAGCCATTTCTTCTCGTaGGTATTGAGGCTGTATTGT | + |
|
Preference number: 2 (lower is better) Translates to: PDNTGHYFIRQVRCLCRYSHFFS*VLRLYC Trigger: ACAATACAGCCTCAATACTCACGAGAAGAAATGGCT...ATACCTGCAAAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTGACAACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGCAGGTATATCAGGCAGGTTAGGTaGCTTTGCAGGTATATGAAA | + |
|
Preference number: 2 (lower is better) Translates to: PDNTGHYFIRQVRCLCRYIRQVR*LCRYMK Trigger: TTTCATATACCTGCAAAGGCACCTAACCTGCCTGAT...ATACCTGCAAAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000131464.8 ENSMUST00000172005.8 |
||
| 3UTR-3UTR GCA 90 bp | AGAGCTGCAGAGCCACACACACAAGGATCGTTATGCTTTGCTGTTCAGTCAGTCTTTACATTAGGAAAATaGAGGTCCCTGGTTGTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: RAAEPHTQGSLCFAVQSVFTLGK*RSLVVE Trigger: TTCAACAACCAGGGACCTGCATTTTCCTAATGTAAA...GACTGACTGAACAGCAAAGCATAACGATCCTTGTGTGTGTGGCTCTGCAGCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146282.3 |
||
| 3UTR-3UTR GCA 90 bp | AGAGCTGCAGAGCCACACACACAAGGATCGTTATGCTTTGCTGTTCAGTCAGTCCAGAAATTTTTAAACTaGTCTACTTGGATGCAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: RAAEPHTQGSLCFAVQSVQKFLN*STWMQG Trigger: TCCCTGCATCCAAGTAGAGCAGTTTAAAAATTTCTG...GACTGACTGAACAGCAAAGCATAACGATCCTTGTGTGTGTGGCTCTGCAGCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146282.3 |
||
| 3UTR-3UTR GCA 90 bp | GTGCATTCCAAAGTAAGGGTCCAAGGCTATGAGTACAAACTCTCTTGGCCATTTATCTGGGTCATGAGCTaGTACAGTGCCAATGATATG | + |
|
Preference number: 2 (lower is better) Translates to: VHSKVRVQGYEYKLSWPFIWVMS*YSANDM Trigger: CATATCATTGGCACTGTAGCAGCTCATGACCCAGAT...AAATGGCCAAGAGAGTTTGTACTCATAGCCTTGGACCCTTACTTTGGAATGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTCCCCACCTGGGATGGATTCTGGCTCTCCATTGCAAGGACTGTAATGTTATGCTCAGATTTTTCGAATaGTGTACCAGGCACTATTAT | + |
|
Preference number: 2 (lower is better) Translates to: SPHLGWILALHCKDCNVMLRFFE*CTRHYY Trigger: ATAATAGTGCCTGGTACACCATTCGAAAAATCTGAG...CATAACATTACAGTCCTTGCAATGGAGAGCCAGAATCCATCCCAGGTGGGGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTGGCTCCCTGACAACCAGGTATATGAAAGTTaGTATCTATTCACAAACCAC | + |
|
Preference number: 2 (lower is better) Translates to: LTEGTMKVRSRCLWLPDNQVYES*YLFTNH Trigger: GTGGTTTGTGAATAGATAGCAACTTTCATATACCTG...GTTGTCAGGGAGCCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000131464.8 ENSMUST00000172005.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTCCCCACCTGGGATGGATTCTGGCTCTCCATTGCAAGGACTGTAATGTTATGTTTGTATTCCATTTCTaGATTGACTCCTATATCTGC | + |
|
Preference number: 2 (lower is better) Translates to: SPHLGWILALHCKDCNVMFVFHF*IDSYIC Trigger: GCAGATATAGGAGTCAATGCAGAAATGGAATACAAA...CATAACATTACAGTCCTTGCAATGGAGAGCCAGAATCCATCCCAGGTGGGGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR CAA 90 bp | ACTCCCCAAGTCTTACTGAAATTCAAATACTTTGTTCCCACAGTTTaGTACACTCTGTGGCTCAGAAGGACAATGTGTGTGTGTGTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: TPQVLLKFKYFVPTV*YTLWLRRTMCVCVC Trigger: ACACACACACACACACATTGTCCTTCTGAGCCACAGAGTGTACAAAACTGTGGGAACAAAGTATTTGAATTTCAGTAAGACTTGGGGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112701.8 |
||
| 3UTR CAA 90 bp | CCGTCTCCTTTATCAACATCAGAGTGGAGATGCATGTGTATGTATTaGTGGAGGTTTGTATACATGAATGTTGATGTAGTGCCATGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: PSPLSTSEWRCMCMY*WRFVYMNVDVVPWL Trigger: GAGCCATGGCACTACATCAACATTCATGTATACAAACCTCCACAAATACATACACATGCATCTCCACTCTGATGTTGATAAAGGAGACGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTGAACTGAGTGGAGACTTGAGCTCCAAAATAAACACAACACTATGTTTTAAAGTGCCTTTGGCTCCCTaGCAACACAGGACATTACTT | + |
|
Preference number: 2 (lower is better) Translates to: PELSGDLSSKINTTLCFKVPLAP*QHRTLL Trigger: AAGTAATGTCCTGTGTTGTCAGGGAGCCAAAGGCAC...TTTAAAACATAGTGTTGTGTTTATTTTGGAGCTCAAGTCTCCACTCAGTTCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112701.8 |
||
| 3UTR-3UTR TCA 90 bp | GCCATTTTGACCAACCATATCCTTTGCCTGAATGACAAGCAAATACTGGTCTTTTGTTTTGGGTTCCACTaGGAAATATGGCTGTCCTTG | + |
|
Preference number: 2 (lower is better) Translates to: AILTNHILCLNDKQILVFCFGFH*EIWLSL Trigger: CAAGGACAGCCATATTTCTCAGTGGAACCCAAAACA...AAAGACCAGTATTTGCTTGTCATTCAGGCAAAGGATATGGTTGGTCAAAATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR-3UTR GCA 90 bp | GTTAGATCCAGGTGCCTTTGGCTCCCTGACAACACAGGACATTACTTTATCAGGCAGGTATATGAAAGTTaGTATCTATTCACAAACCAC | + |
|
Preference number: 2 (lower is better) Translates to: VRSRCLWLPDNTGHYFIRQVYES*YLFTNH Trigger: GTGGTTTGTGAATAGATAGCAACTTTCATATACCTG...CCTGATAAAGTAATGTCCTGTGTTGTCAGGGAGCCAAAGGCACCTGGATCTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000131464.8 ENSMUST00000172005.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTTGGCTCCCTGACAACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTCAGGTATATGAAAGTTaGTATCTATTCACAAACCAC | + |
|
Preference number: 2 (lower is better) Translates to: LWLPDNTGHYFIRQVRCLQVYES*YLFTNH Trigger: GTGGTTTGTGAATAGATAGCAACTTTCATATACCTG...AAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAGGGAGCCAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000131464.8 ENSMUST00000172005.8 |
||
| 3UTR-3UTR GCA 90 bp | GTGCATTCCAAAGTAAGGGTCCAAGGCTATGAGTACAAACTCTCTTGGCCATTTCAGAAATTTTTAAACTaGTCTACTTGGATGCAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: VHSKVRVQGYEYKLSWPFQKFLN*STWMQG Trigger: TCCCTGCATCCAAGTAGAGCAGTTTAAAAATTTCTG...AAATGGCCAAGAGAGTTTGTACTCATAGCCTTGGACCCTTACTTTGGAATGCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR-3UTR GCA 90 bp | GTGCATTCCAAAGTAAGGGTCCAAGGCTATGAGTACAAACTCTCTTGGCCATTTACCAACCATATCCTTTaGCTGAATGACAAGCAAATA | + |
|
Preference number: 2 (lower is better) Translates to: VHSKVRVQGYEYKLSWPFTNHIL*LNDKQI Trigger: TATTTGCTTGTCATTCAGGCAAAGGATATGGTTGGT...AAATGGCCAAGAGAGTTTGTACTCATAGCCTTGGACCCTTACTTTGGAATGCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR-3UTR CCA 90 bp | ATATGGTGGAGCCCCTGGATCCACATCAGCTTCTTTCAGTCTTTCCCAAATAAAAAAACTGGTGTCCATTaGATGGCTCATCTTTATCTA | + |
|
Preference number: 2 (lower is better) Translates to: IWWSPWIHISFFQSFPNKKTGVH*MAHLYL Trigger: TAGATAAAGATGAGCCATCCAATGGACACCAGTTTT...TTTATTTGGGAAAGACTGAAAGAAGCTGATGTGGATCCAGGGGCTCCACCATAT 41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR CAA 90 bp | AAATCGAGTTCCTTTTGTATTGTAATGATTCCTTCTTGTGTGTCTTaGTCAGCAGATATCTTGAAAATGCCCAGTCCATCACCATCCACT | + |
|
Preference number: 2 (lower is better) Translates to: KSSSFCIVMIPSCVS*SADILKMPSPSPST Trigger: AGTGGATGGTGATGGACTGGGCATTTTCAAGATATCTGCTGACAAAGACACACAAGAAGGAATCATTACAATACAAAAGGAACTCGATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR-3UTR GCA 90 bp | AATGGAGACATATTTACAACCTCCTTTTGTCCCAGAAGTGGAATTTCTGTTTACCCTGCTGACTTTCTATaGAGTGCATTCCAAAGTAAG | + |
|
Preference number: 2 (lower is better) Translates to: NGDIFTTSFCPRSGISVYPADFL*SAFQSK Trigger: CTTACTTTGGAATGCACTGCATAGAAAGTCAGCAGG...GTAAACAGAAATTCCACTTCTGGGACAAAAGGAGGTTGTAAATATGTCTCCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000131464.8 ENSMUST00000172005.8 |
||
| 3UTR CAA 90 bp | TTTGTCTCTCGATCCAATGATTTGGCAGTAGTAATAACTCCACTGTaGGCATCAATATTGAAATATCTCTCCAAGTCTGTGTTTCTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: FVSRSNDLAVVITPL*ASILKYLSKSVFLS Trigger: TGACAGAAACACAGACTTGGAGAGATATTTCAATATTGATGCCAACAGTGGAGTTATTACTACTGCCAAATCATTGGATCGAGAGACAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR-3UTR TCA 90 bp | AATTTAAGGACACCAGGCAATTTACCTCAAATAACACAACACACATTTACTGGGGTGCTTTGTGGCAAGTaGCTTTACCTCCATTATTTT | + |
|
Preference number: 2 (lower is better) Translates to: NLRTPGNLPQITQHTFTGVLCGK*LYLHYF Trigger: AAAATAATGGAGGTAAAGTCACTTGCCACAAAGCAC...CCCAGTAAATGTGTGTTGTGTTATTTGAGGTAAATTGCCTGGTGTCCTTAAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146282.3 |
||
| 3UTR-3UTR GCA 90 bp | GCCTTAACAATTAAAAATGGAGACATATTTACAACCTCCTTTTGTCCCAGAAGTCCTGCTGACTTTCTATaGAGTGCATTCCAAAGTAAG | + |
|
Preference number: 2 (lower is better) Translates to: ALTIKNGDIFTTSFCPRSPADFL*SAFQSK Trigger: CTTACTTTGGAATGCACTGCATAGAAAGTCAGCAGG...ACTTCTGGGACAAAAGGAGGTTGTAAATATGTCTCCATTTTTAATTGTTAAGGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000131464.8 ENSMUST00000172005.8 |
||
| 3UTR-3UTR GCA 90 bp | AAATTCTTCCAAGTTTTGATAGGCAAGAAGGTCTCAGATTTTTCGAATGGTGTACAGGTTAGGTGCCTTTaGAGGTATATGAAAGTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: KFFQVLIGKKVSDFSNGVQVRCL*RYMKVA Trigger: AGCAACTTTCATATACCTGCAAAGGCACCTAACCTG...TACACCATTCGAAAAATCTGAGACCTTCTTGCCTATCAAAACTTGGAAGAATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000131464.8 ENSMUST00000172005.8 |
||
| 3UTR CAA 90 bp | TGTATTGTAATGATTCCTTCTTGTGTGTCTTTGTCAGCAGATATCTaGAAAATGCCCAGTCCATCACCATCCACTATTTTGTATTCCATT | + |
|
Preference number: 2 (lower is better) Translates to: CIVMIPSCVSLSADI*KMPSPSPSTILYSI Trigger: AATGGAATACAAAATAGTGGATGGTGATGGACTGGGCATTTTCAAGATATCTGCTGACAAAGACACACAAGAAGGAATCATTACAATACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTTCAAAATCGAGTTCCTTTTGTATTGTAATGATTCCTTCTTGTGTGTCTTTGACATCAGAGTGGAGATaGATGTGTATGTATTTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: ASKSSSFCIVMIPSCVSLTSEWR*MCMYLW Trigger: CCACAAATACATACACATGCATCTCCACTCTGATGT...CAAAGACACACAAGAAGGAATCATTACAATACAAAAGGAACTCGATTTTGAAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGTGCCAATGATATGCCCCACCTGTGTCGCTTCTGACACCTCCATGGGATACGGCTCCACAGGCTTGTaGGTGAGTCTGTCCAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: TVPMICPTCVASDTSMGYGSTGL*VSLSRA Trigger: AGCTCTGGACAGACTCACCAACAAGCCTGTGGAGCC...GTATCCCATGGAGGTGTCAGAAGCGACACAGGTGGGGCATATCATTGGCACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR GCA 72 bp | TCTCACAGGGCTGTTGGAAGAATCTGGGTCATGAGCTaGTACAGTGCCAATGATATGCCCCACCTGTGTCGC | + |
|
Preference number: 3 (lower is better) Translates to: SHRAVGRIWVMS*YSANDMPHLCR Trigger: GCGACACAGGTGGGGCATATCATTGGCACTGTAGCAGCTCATGACCCAGATTCTTCCAACAGCCCTGTGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR TCA 72 bp | TGGAAGAATCTGGGTCATGAGCTGCTACAGTGCCAATaGTATGCCCCACCTGTGTCGCTTCTGACACCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: WKNLGHELLQCQ*YAPPVSLLTPP Trigger: TGGAGGTGTCAGAAGCGACACAGGTGGGGCATATCATTGGCACTGTAGCAGCTCATGACCCAGATTCTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGTGCCAATGATATGCCCCACCTGTGTCGCTTCTGACACCTCCATGGGATACAGACAGTCCGCCATTTaGACCAACCATATCCTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: TVPMICPTCVASDTSMGYRQSAI*TNHILC Trigger: GCAAAGGATATGGTTGGTCAAAATGGCGGACTGTCT...GTATCCCATGGAGGTGTCAGAAGCGACACAGGTGGGGCATATCATTGGCACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR TCA 72 bp | CTGCAGAGTAAAGTGCTTGCCTTGCCCACTAGGATCTaGATTCAAACTCCCATTCCAGAGCTGCAGAGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: LQSKVLALPTRI*IQTPIPELQSH Trigger: GTGGCTCTGCAGCTCTGGAATGGGAGTTTGAATTCAGATCCTAGTGGGCAAGGCAAGCACTTTACTCTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146282.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTTGGCTCCCTGACAACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTCTGTCTCTTATGGCATaGAGGTTTCTCAGCGCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: LWLPDNTGHYFIRQVRCLLSLMA*RFLSAA Trigger: GGCTGCGCTGAGAAACCTCAATGCCATAAGAGACAG...AAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAGGGAGCCAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTCCCCACCTGGGATGGATTCTGGCTCTCCATTGCAAGGACTGTAATGTTATGACCACTCGAGCACTGTaGCCATATGTAGGATCATCG | + |
|
Preference number: 3 (lower is better) Translates to: SPHLGWILALHCKDCNVMTTRAL*PYVGSS Trigger: CGATGATCCTACATATGGCAACAGTGCTCGAGTGGT...CATAACATTACAGTCCTTGCAATGGAGAGCCAGAATCCATCCCAGGTGGGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR GCA 72 bp | AGCTGCAGAGCCACACACACAAGGATCGTTATGCTTTaGTGTTCAGTCAGTCTAGGCAAATCGGGGAATCTG | + |
|
Preference number: 3 (lower is better) Translates to: SCRATHTRIVML*CSVSLGKSGNL Trigger: CAGATTCCCCGATTTGCCTAGACTGACTGAACAGCAAAGCATAACGATCCTTGTGTGTGTGGCTCTGCAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146282.3 |
||
| 3UTR CCA 72 bp | TATAGTAATGGCCACGTAGCCTCTCCCCACCTGGGATaGATTCTGGCTCTCCATTGCAAGGACTGTAATGTT | + |
|
Preference number: 3 (lower is better) Translates to: YSNGHVASPHLG*ILALHCKDCNV Trigger: AACATTACAGTCCTTGCAATGGAGAGCCAGAATCCATCCCAGGTGGGGAGAGGCTACGTGGCCATTACTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR TCA 72 bp | TCACATCTCTCCGAGTTTTGCTGTCTCTTATGGCATTaGGGTTTCTCAGCGCAGCCATGTCAAAGGCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SHLSEFCCLLWH*GFSAQPCQRLL Trigger: CAGAAGCCTTTGACATGGCTGCGCTGAGAAACCTCAATGCCATAAGAGACAGCAAAACTCGGAGAGATGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131464.8 ENSMUST00000134301.2 |
||
| 3UTR GCA 72 bp | CCACTAGGATCTGAATTCAAACTCCCATTCCAGAGCTaGAGAGCCACACACACAAGGATCGTTATGCTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: PLGSEFKLPFQS*RATHTRIVMLC Trigger: GCAAAGCATAACGATCCTTGTGTGTGTGGCTCTGCAGCTCTGGAATGGGAGTTTGAATTCAGATCCTAGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146282.3 |
||
| 3UTR GCA 72 bp | TCCAGTTCTGGGAACTGCAGAGTAAAGTGCTTGCCTTaGCCACTAGGATCTGAATTCAAACTCCCATTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SSSGNCRVKCLP*PLGSEFKLPFQ Trigger: CTGGAATGGGAGTTTGAATTCAGATCCTAGTGGGCAAGGCAAGCACTTTACTCTGCAGTTCCCAGAACTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146282.3 |
||
| 3UTR-3UTR CAA 90 bp | TGTCAATTGAATATCTCACAGGGCTGTTGGAAGAATCTGGGTCATGAGCTGCTATCCCGATCCAGTCTCTaGGTAGCATGGATATCACCA | + |
|
Preference number: 3 (lower is better) Translates to: CQLNISQGCWKNLGHELLSRSSL*VAWISP Trigger: TGGTGATATCCATGCTACCAAGAGACTGGATCGGGA...TAGCAGCTCATGACCCAGATTCTTCCAACAGCCCTGTGAGATATTCAATTGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR TCA 72 bp | GTGTACCAGGCACTATTATTCTTACAGAGGGTACCATaGAAGTTAGATCCAGGTGCCTTTGGCTCCCTGACA | + |
|
Preference number: 3 (lower is better) Translates to: VYQALLFLQRVP*KLDPGAFGSLT Trigger: TGTCAGGGAGCCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAGAATAATAGTGCCTGGTACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000131464.8 ENSMUST00000172005.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTAGTGCCATGGCTCCAGAAATTTTTAAACTGCTCTACTTGGATGCAGGGAACACATCACTCCTTAACTaGTGCCTTCACTGTTCCACC | + |
|
Preference number: 3 (lower is better) Translates to: CSAMAPEIFKLLYLDAGNTSLLN*CLHCST Trigger: GGTGGAACAGTGAAGGCACAAGTTAAGGAGTGATGT...GTTCCCTGCATCCAAGTAGAGCAGTTTAAAAATTTCTGGAGCCATGGCACTACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146282.3 |
||
| 3UTR GCA 72 bp | TCCAGACAGTCCGCCATTTTGACCAACCATATCCTTTaGCTGAATGACAAGCAAATACTGGTCTTTAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: SRQSAILTNHIL*LNDKQILVFSL Trigger: GAGGCTAAAGACCAGTATTTGCTTGTCATTCAGGCAAAGGATATGGTTGGTCAAAATGGCGGACTGTCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR CCA 72 bp | CTGTGTTTCTGTCAATTGAATATCTCACAGGGCTGTTaGAAGAATCTGGGTCATGAGCTGCTACAGTGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: LCFCQLNISQGC*KNLGHELLQCQ Trigger: TTGGCACTGTAGCAGCTCATGACCCAGATTCTTCCAACAGCCCTGTGAGATATTCAATTGACAGAAACACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTAGTGCCATGGCTCCAGAAATTTTTAAACTGCTCTACTTGGATGCAGGGAACCCTGACAAGATGTACTaGATGGAACCGTCTCCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: CSAMAPEIFKLLYLDAGNPDKMY*MEPSPL Trigger: TAAAGGAGACGGTTCCATCAAGTACATCTTGTCAGG...GTTCCCTGCATCCAAGTAGAGCAGTTTAAAAATTTCTGGAGCCATGGCACTACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTGACAACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGCAGGTATTTGTCAGCAGATATCTaGAAAATGCCCAGTCCATCA | + |
|
Preference number: 3 (lower is better) Translates to: PDNTGHYFIRQVRCLCRYLSADI*KMPSPS Trigger: TGATGGACTGGGCATTTTCAAGATATCTGCTGACAA...ATACCTGCAAAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAGCTGCAGAGCCACACACACAAGGATCGTTATGCTTTGCTGTTCAGTCAGTCCCTCCAAATCTCTGTTaGCAATATTTAGTTCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: RAAEPHTQGSLCFAVQSVPPNLC*QYLVLC Trigger: ACAGAGAACTAAATATTGCAAACAGAGATTTGGAGG...GACTGACTGAACAGCAAAGCATAACGATCCTTGTGTGTGTGGCTCTGCAGCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146282.3 |
||
| 3UTR TCA 72 bp | AAATTGAACTTGCCCCTTCGCCTGACAAGATGTACTTaGTGGAACCGTCTCCTTTATCAACATCAGAGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: KLNLPLRLTRCT*WNRLLYQHQSG Trigger: TCCACTCTGATGTTGATAAAGGAGACGGTTCCATCAAGTACATCTTGTCAGGCGAAGGGGCAAGTTCAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR GCA 72 bp | ATTCTTACAGAGGGTACCATGAAAGTTAGATCCAGGTaGCTTTGGCTCCCTGACAACACAGGACATTACTTT | + |
|
Preference number: 3 (lower is better) Translates to: ILTEGTMKVRSR*LWLPDNTGHYF Trigger: AAAGTAATGTCCTGTGTTGTCAGGGAGCCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000131464.8 ENSMUST00000172005.8 |
||
| 3UTR GCA 72 bp | ACCTACAGCAATGTAATCATGCAGTCCACTCTGATATaGAGCCCAGCAAGAACAACAATGACAACAACGACA | + |
|
Preference number: 3 (lower is better) Translates to: TYSNVIMQSTLI*SPARTTMTTTT Trigger: TGTCGTTGTTGTCATTGTTGTTCTTGCTGGGCTGCATATCAGAGTGGACTGCATGATTACATTGCTGTAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146282.3 |
||
| 3UTR-3UTR CAA 90 bp | CTGACAACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGCAGGTATACTGTGTTTCTGTCAATaGAATATCTCACAGGGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LTTQDITLSGRLGAFAGILCFCQ*NISQGC Trigger: ACAGCCCTGTGAGATATTCAATTGACAGAAACACAG...TATACCTGCAAAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR TCA 72 bp | CTATGCAGTGCATTCCAAAGTAAGGGTCCAAGGCTATaGGTACAAACTCTCTTGGCCATTTCCATACATTTC | + |
|
Preference number: 3 (lower is better) Translates to: LCSAFQSKGPRL*VQTLLAISIHF Trigger: GAAATGTATGGAAATGGCCAAGAGAGTTTGTACTCATAGCCTTGGACCCTTACTTTGGAATGCACTGCATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR CCA 72 bp | TTCAAATACTTTGTTCCCACAGTTTTGTACACTCTGTaGCTCAGAAGGACAATGTGTGTGTGTGTGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: FKYFVPTVLYTL*LRRTMCVCVCV Trigger: CACACACACACACACACACATTGTCCTTCTGAGCCACAGAGTGTACAAAACTGTGGGAACAAAGTATTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112701.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTGACAACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGCAGGTATAAATTCTTCCAAGTTTaGATAGGCAAGAAGGTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: PDNTGHYFIRQVRCLCRYKFFQV*IGKKVS Trigger: TGAGACCTTCTTGCCTATCAAAACTTGGAAGAATTT...ATACCTGCAAAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000131464.8 ENSMUST00000172005.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCATACTGCCTCATCTTGTTCTAACTGTGGTAAAAGGACTTAGCAGCATGTTTACATCACTCCTTAACTaGTGCCTTCACTGTTCCACC | + |
|
Preference number: 3 (lower is better) Translates to: FILPHLVLTVVKGLSSMFTSLLN*CLHCST Trigger: GGTGGAACAGTGAAGGCACAAGTTAAGGAGTGATGT...AAACATGCTGCTAAGTCCTTTTACCACAGTTAGAACAAGATGAGGCAGTATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129923.2 ENSMUST00000137092.8 ENSMUST00000146282.3 |
||
| 3UTR-3UTR CAA 90 bp | AATTTAAGGACACCAGGCAATTTACCTCAAATAACACAACACACATTTACTGGGCTAGAGGAGCAGATGTaGTCATCCACGGTACAGACA | + |
|
Preference number: 3 (lower is better) Translates to: NLRTPGNLPQITQHTFTGLEEQM*SSTVQT Trigger: TGTCTGTACCGTGGATGACAACATCTGCTCCTCTAG...CCCAGTAAATGTGTGTTGTGTTATTTGAGGTAAATTGCCTGGTGTCCTTAAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146282.3 |
||
| 3UTR TCA 72 bp | TATATCTGCATCTGCAGCTTTAATTCTGGCCACAACTaGTGCCACAGGCAAAGATTCTGGAACATTATACTG | + |
|
Preference number: 3 (lower is better) Translates to: YICICSFNSGHN*CHRQRFWNIIL Trigger: CAGTATAATGTTCCAGAATCTTTGCCTGTGGCATCAGTTGTGGCCAGAATTAAAGCTGCAGATGCAGATATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR TCA 72 bp | TCCACTGTCCACAATGAAAATGGGCAGATAATAAACTaGTTGTTCCTGTCTTCGGAAGCCATTTCTTCTCGT | + |
|
Preference number: 3 (lower is better) Translates to: STVHNENGQIIN*LFLSSEAISSR Trigger: ACGAGAAGAAATGGCTTCCGAAGACAGGAACAATCAGTTTATTATCTGCCCATTTTCATTGTGGACAGTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR GCA 72 bp | CTTTTCTTTGAGATGTGTGTAGCAATGATGCTCTACTaGTGTGCTCTGTCACTCCATTTTCAATGCTTCATG | + |
|
Preference number: 3 (lower is better) Translates to: LFFEMCVAMMLY*CALSLHFQCFM Trigger: CATGAAGCATTGAAAATGGAGTGACAGAGCACAGCAGTAGAGCATCATTGCTACACACATCTCAAAGAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112701.8 |
||
| 3UTR GCA 72 bp | GTTGATGTAGTGCCATGGCTCCAGAAATTTTTAAACTaGTCTACTTGGATGCAGGGAACATATGTGGTTAAC | + |
|
Preference number: 3 (lower is better) Translates to: VDVVPWLQKFLN*STWMQGTYVVN Trigger: GTTAACCACATATGTTCCCTGCATCCAAGTAGAGCAGTTTAAAAATTTCTGGAGCCATGGCACTACATCAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000131464.8 ENSMUST00000146282.3 |
||
| 3UTR-3UTR CAA 90 bp | TTACTGCTCTTTTTCCAGTTGTTCAGTACTAAACTAAGGAATTTCGGACATCACACATCACTCCTTAACTaGTGCCTTCACTGTTCCACC | + |
|
Preference number: 3 (lower is better) Translates to: LLLFFQLFSTKLRNFGHHTSLLN*CLHCST Trigger: GGTGGAACAGTGAAGGCACAAGTTAAGGAGTGATGT...GTGATGTCCGAAATTCCTTAGTTTAGTACTGAACAACTGGAAAAAGAGCAGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000137092.8 ENSMUST00000146282.3 |
||
| 3UTR-3UTR CAA 90 bp | CCCCATACCACTAGATACATACACCATGAGCTGATCATCATTTGCCTAATAGCAACTCATCATGTCCAATaGCTATACACAGACAAAATC | + |
|
Preference number: 3 (lower is better) Translates to: PHTTRYIHHELIIICLIATHHVQ*LYTDKI Trigger: GATTTTGTCTGTGTATAGCAATTGGACATGATGAGT...TGCTATTAGGCAAATGATGATCAGCTCATGGTGTATGTATCTAGTGGTATGGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000137092.8 ENSMUST00000146282.3 |
||
| 3UTR TCA 72 bp | TGTAATGTTATGAACCGCATTTGTCTCTCGATCCAATaGTTTGGCAGTAGTAATAACTCCACTGTTGGCATC | + |
|
Preference number: 3 (lower is better) Translates to: CNVMNRICLSIQ*FGSSNNSTVGI Trigger: GATGCCAACAGTGGAGTTATTACTACTGCCAAATCATTGGATCGAGAGACAAATGCGGTTCATAACATTACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR TCA 72 bp | CTGATTGTTCCTGTCTTCGGAAGCCATTTCTTCTCGTaGGTATTGAGGCTGTATTGTCTTTGTTATCTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: LIVPVFGSHFFS*VLRLYCLCYLS Trigger: TGAAAGATAACAAAGACAATACAGCCTCAATACTCACGAGAAGAAATGGCTTCCGAAGACAGGAACAATCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR CCA 72 bp | AGTTTTGATAGGCAAGAAGGTCTCAGATTTTTCGAATaGTGTACCAGGCACTATTATTCTTACAGAGGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: SFDRQEGLRFFE*CTRHYYSYRGY Trigger: GTACCCTCTGTAAGAATAATAGTGCCTGGTACACCATTCGAAAAATCTGAGACCTTCTTGCCTATCAAAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000131464.8 ENSMUST00000172005.8 |
||
| 3UTR-3UTR CAA 90 bp | CACCAGCCTACTTATCCTCCAAATCTCTGTTTGCAATATTTAGTTCTCTGTCCTCTGTTTGTGAATTCCTaGAGTTTCATGATCAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: HQPTYPPNLCLQYLVLCPLFVNS*SFMIKE Trigger: TTCCTTGATCATGAAACTCAAGGAATTCACAAACAG...AGGACAGAGAACTAAATATTGCAAACAGAGATTTGGAGGATAAGTAGGCTGGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146282.3 |
||
| 3UTR TCA 72 bp | AATAGTGATTACCAGGCCACTAAGATCCTTTTAAATTaGACATCACTCCTTAACTTGTGCCTTCACTGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: NSDYQATKILLN*TSLLNLCLHCS Trigger: GGAACAGTGAAGGCACAAGTTAAGGAGTGATGTTCAATTTAAAAGGATCTTAGTGGCCTGGTAATCACTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129923.2 ENSMUST00000137092.8 ENSMUST00000146282.3 |
||
| 3UTR CCA 72 bp | TGGAGGTTTGTATACATGAATGTTGATGTAGTGCCATaGCTCCAGAAATTTTTAAACTGCTCTACTTGGATG | + |
|
Preference number: 3 (lower is better) Translates to: WRFVYMNVDVVP*LQKFLNCSTWM Trigger: CATCCAAGTAGAGCAGTTTAAAAATTTCTGGAGCCATGGCACTACATCAACATTCATGTATACAAACCTCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000131464.8 ENSMUST00000146282.3 |
||
| 3UTR TCA 72 bp | GTGTATGTATTTGTGGAGGTTTGTATACATGAATGTTaGTGTAGTGCCATGGCTCCAGAAATTTTTAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: VYVFVEVCIHEC*CSAMAPEIFKL Trigger: CAGTTTAAAAATTTCTGGAGCCATGGCACTACATCAACATTCATGTATACAAACCTCCACAAATACATACAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000131464.8 ENSMUST00000146282.3 |
||
| 3UTR CCA 72 bp | AGAACTTACACATCATTCAATGCTGGCACGGCACAATaGATTGAAATGTATGACACCATACTTTGTAAAATA | + |
|
Preference number: 3 (lower is better) Translates to: RTYTSFNAGTAQ*IEMYDTILCKI Trigger: TATTTTACAAAGTATGGTGTCATACATTTCAATCCATTGTGCCGTGCCAGCATTGAATGATGTGTAAGTTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112701.8 |
||
| 3UTR CCA 72 bp | GTGAGTCTTAGGGATCAAATTCACATTAGTGCTTTGTaGCAAGTGACTTTACCTCCATTATTTTTCTACAAA | + |
|
Preference number: 3 (lower is better) Translates to: VSLRDQIHISAL*QVTLPPLFFYK Trigger: TTTGTAGAAAAATAATGGAGGTAAAGTCACTTGCCACAAAGCACTAATGTGAATTTGATCCCTAAGACTCAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146282.3 |
||
| 3UTR CCA 72 bp | TGGAGACATATTTACAACCTCCTTTTGTCCCAGAAGTaGAATTTCTGTTTACTATATGTAGTATTTTCCACT | + |
|
Preference number: 3 (lower is better) Translates to: WRHIYNLLLSQK*NFCLLYVVFST Trigger: AGTGGAAAATACTACATATAGTAAACAGAAATTCCACTTCTGGGACAAAAGGAGGTTGTAAATATGTCTCCA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000131464.8 ENSMUST00000172005.8 |
||
| 3UTR CAA 72 bp | AGGCTCCACAGGCTTGTTGGTGAGTCTGTCCAGAGCTaGGGCTCTCAGTGTATAATAGGCCTGCTCCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RLHRLVGESVQS*GSQCIIGLLLP Trigger: CGGGAGGAGCAGGCCTATTATACACTGAGAGCCCAAGCTCTGGACAGACTCACCAACAAGCCTGTGGAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| CDS-3UTR TCA 90 bp | GAGAGTCATATGGTGGAGCCCCTGGATCCACATCAGCTTCTTTCAGTCTTTCCCCGTGGCAGCTCAGCTTaGCTCATTCCAGAGAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ESHMVEPLDPHQLLSVFPRGSSA*LIPEKQ Trigger: TTGCTTCTCTGGAATGAGTCAAGCTGAGCTGCCACG...GGGAAAGACTGAAAGAAGCTGATGTGGATCCAGGGGCTCCACCATATGACTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| CDS-3UTR GCA 90 bp | CTTTGGCTCCCTGACAACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTGATTCCAAACCCAGCTaGGCTTGGTCCGGGACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LWLPDNTGHYFIRQVRCLDSKPS*AWSGTF Trigger: GAAGGTCCCGGACCAAGCGCAGCTGGGTTTGGAATC...AAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAGGGAGCCAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000131464.8 ENSMUST00000172005.8 |
||
| CDS-3UTR GCA 90 bp | AGTTTTGCTGTCTCTTATGGCATTGAGGTTTCTCAGCGCAGCCATGTCAAAGGCGATTCCAAACCCAGCTaGGCTTGGTCCGGGACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SFAVSYGIEVSQRSHVKGDSKPS*AWSGTF Trigger: GAAGGTCCCGGACCAAGCGCAGCTGGGTTTGGAATC...GCCTTTGACATGGCTGCGCTGAGAAACCTCAATGCCATAAGAGACAGCAAAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| CDS-3UTR TCA 90 bp | GTTAGATCCAGGTGCCTTTGGCTCCCTGACAACACAGGACATTACTTTATCAGGCTGCTACAGTGCCAATaGTATGCCCCACCTGTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: VRSRCLWLPDNTGHYFIRLLQCQ*YAPPVS Trigger: CGACACAGGTGGGGCATATCATTGGCACTGTAGCAG...CCTGATAAAGTAATGTCCTGTGTTGTCAGGGAGCCAAAGGCACCTGGATCTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR TCA 90 bp | GTCTCTTATGGCATTGAGGTTTCTCAGCGCAGCCATGTCAAAGGCTTCTGTGTCATAACCTGCCCTGGCTaGGCGTTTTCACAGACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VSYGIEVSQRSHVKGFCVITCPG*AFSQTV Trigger: CACTGTCTGTGAAAACGCTCAGCCAGGGCAGGTTAT...GACACAGAAGCCTTTGACATGGCTGCGCTGAGAAACCTCAATGCCATAAGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134301.2 |
||
| CDS-3UTR GCA 90 bp | GCTGTCTCTTATGGCATTGAGGTTTCTCAGCGCAGCCATGTCAAAGGCTTCTGTCATAGGCCTCTGCATTaGAGGTCTGGGCTATGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: AVSYGIEVSQRSHVKGFCHRPLH*RSGLCH Trigger: ATGGCATAGCCCAGACCTGCAATGCAGAGGCCTATG...ACAGAAGCCTTTGACATGGCTGCGCTGAGAAACCTCAATGCCATAAGAGACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134301.2 |
||
| CDS-3UTR GCA 90 bp | TCCAGGTGCCTTTGGCTCCCTGACAACACAGGACATTACTTTATCAGGCAGGTTGACACAGGCCAGTATTaGTATCAAGGCCCCAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRCLWLPDNTGHYFIRQVDTGQY*YQGPSA Trigger: AGCACTGGGGCCTTGATAGCAATACTGGCCTGTGTC...AACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAGGGAGCCAAAGGCACCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | CCTGACAACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGCAGGTATAAACCCAGCTGCGCTTaGTCCGGGACCTTCCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: PDNTGHYFIRQVRCLCRYKPSCA*SGTFLT Trigger: AGTCAGGAAGGTCCCGGACCAAGCGCAGCTGGGTTT...ATACCTGCAAAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000131464.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | CTGTCTCTTATGGCATTGAGGTTTCTCAGCGCAGCCATGTCAAAGGCTTCTGTGCTGGATAACCTGCCCTaGCTGAGCGTTTTCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LSLMALRFLSAAMSKASVLDNLP*LSVFTD Trigger: GTCTGTGAAAACGCTCAGCCAGGGCAGGTTATCCAG...CACAGAAGCCTTTGACATGGCTGCGCTGAGAAACCTCAATGCCATAAGAGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134301.2 |
||
| CDS-3UTR CCA 90 bp | CTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTGGCTCCCTGACAACCTGAAGAGAGTCATATaGTGGAGCCCCTGGATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LTEGTMKVRSRCLWLPDNLKRVI*WSPWIH Trigger: GTGGATCCAGGGGCTCCACCATATGACTCTCTTCAG...GTTGTCAGGGAGCCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR TCA 90 bp | CTGACAACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGCAGGTATACCACAGGCTTGTTGGTaGGTCTGTCCAGAGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LTTQDITLSGRLGAFAGIPQACW*VCPELG Trigger: CCCAAGCTCTGGACAGACTCACCAACAAGCCTGTGG...TATACCTGCAAAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGGTGCCTTTGGCTCCCTGACAACACAGGACATTACTTTATCAGGCAGGTTGAAGAATCTGGGTCATaGGCTGCTACAGTGCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: SRCLWLPDNTGHYFIRQVEESGS*AATVPM Trigger: CATTGGCACTGTAGCAGCTCATGACCCAGATTCTTC...AACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAGGGAGCCAAAGGCACCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR TCA 90 bp | GTTAGATCCAGGTGCCTTTGGCTCCCTGACAACACAGGACATTACTTTATCAGGATAACCTGCCCTGGCTaGGCGTTTTCACAGACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VRSRCLWLPDNTGHYFIRITCPG*AFSQTV Trigger: CACTGTCTGTGAAAACGCTCAGCCAGGGCAGGTTAT...CCTGATAAAGTAATGTCCTGTGTTGTCAGGGAGCCAAAGGCACCTGGATCTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR GCA 90 bp | CGAGTTTTGCTGTCTCTTATGGCATTGAGGTTTCTCAGCGCAGCCATGTCAAAGTGCAGGTCTGGGCTATaGCATCAGCATCACAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RVLLSLMALRFLSAAMSKCRSGL*HQHHSH Trigger: GTGACTGTGATGCTGATGGCATAGCCCAGACCTGCA...CTTTGACATGGCTGCGCTGAGAAACCTCAATGCCATAAGAGACAGCAAAACTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134301.2 |
||
| CDS-3UTR GCA 90 bp | CGAGTTTTGCTGTCTCTTATGGCATTGAGGTTTCTCAGCGCAGCCATGTCAAAGGACACAGGCCAGTATTaGTATCAAGGCCCCAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RVLLSLMALRFLSAAMSKDTGQY*YQGPSA Trigger: AGCACTGGGGCCTTGATAGCAATACTGGCCTGTGTC...CTTTGACATGGCTGCGCTGAGAAACCTCAATGCCATAAGAGACAGCAAAACTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134301.2 |
||
| CDS-3UTR CCA 90 bp | CTGACAACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGCAGGTATAAAACCCAGCTGCGCTTaGTCCGGGACCTTCCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: LTTQDITLSGRLGAFAGIKPSCA*SGTFLT Trigger: AGTCAGGAAGGTCCCGGACCAAGCGCAGCTGGGTTT...TATACCTGCAAAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000131464.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | GGCACTATTATTCTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTGGAAACCCAGCTGCGCTTaGTCCGGGACCTTCCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: GTIILTEGTMKVRSRCLWKPSCA*SGTFLT Trigger: AGTCAGGAAGGTCCCGGACCAAGCGCAGCTGGGTTT...CCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAGAATAATAGTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000131464.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | CTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTGGCTCCCTGACAACACCTGGGATGGATTCTaGCTCTCCATTGCAAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: LTEGTMKVRSRCLWLPDNTWDGF*LSIART Trigger: AGTCCTTGCAATGGAGAGCCAGAATCCATCCCAGGT...GTTGTCAGGGAGCCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGGTGCCTTTGGCTCCCTGACAACACAGGACATTACTTTATCAGGCAGGTTAAGAGAGTCATATGGTaGAGCCCCTGGATCCACATC | + |
|
Preference number: 4 (lower is better) Translates to: SRCLWLPDNTGHYFIRQVKRVIW*SPWIHI Trigger: GATGTGGATCCAGGGGCTCCACCATATGACTCTCTT...AACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAGGGAGCCAAAGGCACCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| 3UTR CAA 72 bp | GACCCAAGCTCAGAAACCGGGGATCAGCATCTCGATTaGCAGCTTCTATGCGCAGTGTATAACTCGTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: DPSSETGDQHLD*QLLCAVYNSFW Trigger: CCAAAACGAGTTATACACTGCGCATAGAAGCTGCAAATCGAGATGCTGATCCCCGGTTTCTGAGCTTGGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| 3UTR CAA 72 bp | GAGCTGCAGAGCCACACACACAAGGATCGTTATGCTTaGCTGTTCAGTCAGTCTAGGCAAATCGGGGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: ELQSHTHKDRYA*LFSQSRQIGES Trigger: AGATTCCCCGATTTGCCTAGACTGACTGAACAGCAAAGCATAACGATCCTTGTGTGTGTGGCTCTGCAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146282.3 |
||
| CDS-3UTR TCA 90 bp | GTTAGATCCAGGTGCCTTTGGCTCCCTGACAACACAGGACATTACTTTATCAGGGACAGTCCGCCATTTTaGCCAACCATATCCTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VRSRCLWLPDNTGHYFIRDSPPF*PTISFA Trigger: GGCAAAGGATATGGTTGGTCAAAATGGCGGACTGTC...CCTGATAAAGTAATGTCCTGTGTTGTCAGGGAGCCAAAGGCACCTGGATCTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGGTGCCTTTGGCTCCCTGACAACACAGGACATTACTTTATCAGGCAGGTTGAGGTGGGTTATCATTaGCATCAGTTAGGGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SRCLWLPDNTGHYFIRQVEVGYH*HQLGSQ Trigger: CTGTGACCCTAACTGATGTCAATGATAACCCACCTC...AACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAGGGAGCCAAAGGCACCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR TCA 90 bp | GGCACTATTATTCTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTGGCTGCTACAGTGCCAATaGTATGCCCCACCTGTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: GTIILTEGTMKVRSRCLWLLQCQ*YAPPVS Trigger: CGACACAGGTGGGGCATATCATTGGCACTGTAGCAG...CCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAGAATAATAGTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR GCA 90 bp | CCTGACAACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGCAGGTATTGCAGGTCTGGGCTATaGCATCAGCATCACAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PDNTGHYFIRQVRCLCRYCRSGL*HQHHSH Trigger: GTGACTGTGATGCTGATGGCATAGCCCAGACCTGCA...ATACCTGCAAAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | CCTGACAACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGCAGGTATCGGGACCTTCCTGACTaGAAGTATGGCTTGGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: PDNTGHYFIRQVRCLCRYRDLPD*KYGLDL Trigger: CAGATCCAAGCCATACTTCCAGTCAGGAAGGTCCCG...ATACCTGCAAAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000131464.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | CTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTGGCTCCCTGACAACTGTTGTGTCACTGAATaGACCCAAGCTCAGAAACCG | + |
|
Preference number: 4 (lower is better) Translates to: LTEGTMKVRSRCLWLPDNCCVTE*TQAQKP Trigger: CGGTTTCTGAGCTTGGGTCCATTCAGTGACACAACA...GTTGTCAGGGAGCCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | TCTTATGGCATTGAGGTTTCTCAGCGCAGCCATGTCAAAGGCTTCTGTGTCTTCTCTGCATTGCAGGTCTaGGCTATGCCATCAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: SYGIEVSQRSHVKGFCVFSALQV*AMPSAS Trigger: TGATGCTGATGGCATAGCCCAGACCTGCAATGCAGA...GAAGACACAGAAGCCTTTGACATGGCTGCGCTGAGAAACCTCAATGCCATAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134301.2 |
||
| 3UTR CAA 72 bp | GTCACATCTCTCCGAGTTTTGCTGTCTCTTATGGCATaGAGGTTTCTCAGCGCAGCCATGTCAAAGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VTSLRVLLSLMA*RFLSAAMSKAS Trigger: AGAAGCCTTTGACATGGCTGCGCTGAGAAACCTCAATGCCATAAGAGACAGCAAAACTCGGAGAGATGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131464.8 ENSMUST00000134301.2 |
||
| CDS-3UTR TCA 90 bp | GGTGTACCAGGCACTATTATTCTTACAGAGGGTACCATGAAAGTTAGATCCAGGCGTGGCAGCTCAGCTTaGCTCATTCCAGAGAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GVPGTIILTEGTMKVRSRRGSSA*LIPEKQ Trigger: TTGCTTCTCTGGAATGAGTCAAGCTGAGCTGCCACG...CCTGGATCTAACTTTCATGGTACCCTCTGTAAGAATAATAGTGCCTGGTACACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000131464.8 ENSMUST00000172005.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGGTGCCTTTGGCTCCCTGACAACACAGGACATTACTTTATCAGGCAGGTTTACATAGAGGGGATCTaGACCCATGTATTCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRCLWLPDNTGHYFIRQVYIEGI*THVFFQ Trigger: CTGGAAGAATACATGGGTTCAGATCCCCTCTATGTA...AACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAGGGAGCCAAAGGCACCTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000131464.8 ENSMUST00000172005.8 |
||
| CDS-3UTR TCA 90 bp | CCTGACAACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGCAGGTATACTTGCCCCTTCGCCTaGCAAGATGTACTTGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: PDNTGHYFIRQVRCLCRYTCPFA*QDVLDG Trigger: TCCATCAAGTACATCTTGTCAGGCGAAGGGGCAAGT...ATACCTGCAAAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR TCA 90 bp | AACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGCAGGTATATGAAACCACAGGCTTGTTGGTaGGTCTGTCCAGAGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NTGHYFIRQVRCLCRYMKPQACW*VCPELG Trigger: CCCAAGCTCTGGACAGACTCACCAACAAGCCTGTGG...TTTCATATACCTGCAAAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGGTGCCTTTGGCTCCCTGACAACACAGGACATTACTTTATCAGGCAGGTTCTTGATAACAAACTCTaGTTCAGGCTCCACAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SRCLWLPDNTGHYFIRQVLDNKL*FRLHRL Trigger: AAGCCTGTGGAGCCTGAATCAGAGTTTGTTATCAAG...AACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAGGGAGCCAAAGGCACCTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR TCA 90 bp | GTTAGATCCAGGTGCCTTTGGCTCCCTGACAACACAGGACATTACTTTATCAGGGAGGTGGGTTATCATTaGCATCAGTTAGGGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VRSRCLWLPDNTGHYFIREVGYH*HQLGSQ Trigger: CTGTGACCCTAACTGATGTCAATGATAACCCACCTC...CCTGATAAAGTAATGTCCTGTGTTGTCAGGGAGCCAAAGGCACCTGGATCTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR GCA 90 bp | TCACTTTGGCACATCTTAACAGCTAGAGAACTTACACATCATTCAATGCTGGCAGATTCCAAACCCAGCTaGGCTTGGTCCGGGACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLWHILTARELTHHSMLADSKPS*AWSGTF Trigger: GAAGGTCCCGGACCAAGCGCAGCTGGGTTTGGAATC...TGCCAGCATTGAATGATGTGTAAGTTCTCTAGCTGTTAAGATGTGCCAAAGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112701.8 |
||
| CDS-3UTR GCA 90 bp | CCTGACAACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGCAGGTATACAGTGCCAATGATATaGCCCACCTGTGTCGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PDNTGHYFIRQVRCLCRYTVPMI*PTCVAS Trigger: AGAAGCGACACAGGTGGGGCATATCATTGGCACTGT...ATACCTGCAAAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGGTGCCTTTGGCTCCCTGACAACACAGGACATTACTTTATCAGGCAGGTTATCTGGGTCATGAGCTaGTACAGTGCCAATGATATG | + |
|
Preference number: 4 (lower is better) Translates to: SRCLWLPDNTGHYFIRQVIWVMS*YSANDM Trigger: CATATCATTGGCACTGTAGCAGCTCATGACCCAGAT...AACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAGGGAGCCAAAGGCACCTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR GCA 90 bp | ATTATTCTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTGGCTCCCTTGCAGGTCTGGGCTATaGCATCAGCATCACAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: IILTEGTMKVRSRCLWLPCRSGL*HQHHSH Trigger: GTGACTGTGATGCTGATGGCATAGCCCAGACCTGCA...AGGGAGCCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAGAATAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR GCA 90 bp | CCAAGTTTTGATAGGCAAGAAGGTCTCAGATTTTTCGAATGGTGTACCAGGCACTGCAGGTCTGGGCTATaGCATCAGCATCACAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PSFDRQEGLRFFEWCTRHCRSGL*HQHHSH Trigger: GTGACTGTGATGCTGATGGCATAGCCCAGACCTGCA...GTGCCTGGTACACCATTCGAAAAATCTGAGACCTTCTTGCCTATCAAAACTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR GCA 90 bp | GGTGTACCAGGCACTATTATTCTTACAGAGGGTACCATGAAAGTTAGATCCAGGCATAGGCCTCTGCATTaGAGGTCTGGGCTATGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GVPGTIILTEGTMKVRSRHRPLH*RSGLCH Trigger: ATGGCATAGCCCAGACCTGCAATGCAGAGGCCTATG...CCTGGATCTAACTTTCATGGTACCCTCTGTAAGAATAATAGTGCCTGGTACACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR GCA 90 bp | ATTATTCTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTGGCTCCCTCATAGGCCTCTGCATTaGAGGTCTGGGCTATGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: IILTEGTMKVRSRCLWLPHRPLH*RSGLCH Trigger: ATGGCATAGCCCAGACCTGCAATGCAGAGGCCTATG...AGGGAGCCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAGAATAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR GCA 90 bp | CTGACAACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGCAGGTATAGACACAGGCCAGTATTaGTATCAAGGCCCCAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LTTQDITLSGRLGAFAGIDTGQY*YQGPSA Trigger: AGCACTGGGGCCTTGATAGCAATACTGGCCTGTGTC...TATACCTGCAAAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | GGCACTATTATTCTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTGGCGGGACCTTCCTGACTaGAAGTATGGCTTGGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: GTIILTEGTMKVRSRCLWRDLPD*KYGLDL Trigger: CAGATCCAAGCCATACTTCCAGTCAGGAAGGTCCCG...CCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAGAATAATAGTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000131464.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | AGGAGGAGGGGATTTCCTGAGGGTATTAGGTGTGGCTTTAAATATAGTCAAAATAAACCCAGCTGCGCTTaGTCCGGGACCTTCCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: RRRGFPEGIRCGFKYSQNKPSCA*SGTFLT Trigger: AGTCAGGAAGGTCCCGGACCAAGCGCAGCTGGGTTT...ATTTTGACTATATTTAAAGCCACACCTAATACCCTCAGGAAATCCCCTCCTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000129923.2 ENSMUST00000137092.8 ENSMUST00000146282.3 |
||
| CDS-3UTR CCA 90 bp | CTTTGGCTCCCTGACAACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGTTGTGTCACTGAATaGACCCAAGCTCAGAAACCG | + |
|
Preference number: 4 (lower is better) Translates to: LWLPDNTGHYFIRQVRCLCCVTE*TQAQKP Trigger: CGGTTTCTGAGCTTGGGTCCATTCAGTGACACAACA...AAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAGGGAGCCAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | CTTTGGCTCCCTGACAACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTATCTCACAGGGCTGTTaGAAGAATCTGGGTCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: LWLPDNTGHYFIRQVRCLISQGC*KNLGHE Trigger: CTCATGACCCAGATTCTTCCAACAGCCCTGTGAGAT...AAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAGGGAGCCAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGGTGCCTTTGGCTCCCTGACAACACAGGACATTACTTTATCAGGCAGGTTCGTTTTCACAGACAGTaGTTTCATAGTCCATGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: SRCLWLPDNTGHYFIRQVRFHRQ*FHSPWR Trigger: TCGCCATGGACTATGAAACCACTGTCTGTGAAAACG...AACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAGGGAGCCAAAGGCACCTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | CTGACAACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGCAGGTATACTGAAGAGAGTCATATaGTGGAGCCCCTGGATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LTTQDITLSGRLGAFAGILKRVI*WSPWIH Trigger: GTGGATCCAGGGGCTCCACCATATGACTCTCTTCAG...TATACCTGCAAAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR TCA 90 bp | AATACTTTGTTCCCACAGTTTTGTACACTCTGTGGCTCAGAAGGACAATGTGTGCGTGGCAGCTCAGCTTaGCTCATTCCAGAGAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: NTLFPQFCTLCGSEGQCVRGSSA*LIPEKQ Trigger: TTGCTTCTCTGGAATGAGTCAAGCTGAGCTGCCACG...CACACATTGTCCTTCTGAGCCACAGAGTGTACAAAACTGTGGGAACAAAGTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112701.8 |
||
| CDS-3UTR TCA 90 bp | GGCACTATTATTCTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTGGACTTGCCCCTTCGCCTaGCAAGATGTACTTGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: GTIILTEGTMKVRSRCLWTCPFA*QDVLDG Trigger: TCCATCAAGTACATCTTGTCAGGCGAAGGGGCAAGT...CCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAGAATAATAGTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR TCA 90 bp | GTTAGATCCAGGTGCCTTTGGCTCCCTGACAACACAGGACATTACTTTATCAGGCTTGATAACAAACTCTaGTTCAGGCTCCACAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VRSRCLWLPDNTGHYFIRLDNKL*FRLHRL Trigger: AAGCCTGTGGAGCCTGAATCAGAGTTTGTTATCAAG...CCTGATAAAGTAATGTCCTGTGTTGTCAGGGAGCCAAAGGCACCTGGATCTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR TCA 90 bp | CTTTGGCTCCCTGACAACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGTTTTGGGTTCCACTaGGAAATATGGCTGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LWLPDNTGHYFIRQVRCLCFGFH*EIWLSL Trigger: CAAGGACAGCCATATTTCTCAGTGGAACCCAAAACA...AAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAGGGAGCCAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR TCA 90 bp | CTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTGGCTCCCTGACAACTGGAATCTAAAGAACTaGGAGATTCAGCTACTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LTEGTMKVRSRCLWLPDNWNLKN*EIQLLS Trigger: GCTCAGTAGCTGAATCTCTCAGTTCTTTAGATTCCA...GTTGTCAGGGAGCCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGGTGCCTTTGGCTCCCTGACAACACAGGACATTACTTTATCAGGCAGGTTTGGAATCTAAAGAACTaGGAGATTCAGCTACTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SRCLWLPDNTGHYFIRQVWNLKN*EIQLLS Trigger: GCTCAGTAGCTGAATCTCTCAGTTCTTTAGATTCCA...AACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAGGGAGCCAAAGGCACCTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR GCA 90 bp | ATCACTTCATTCATACTGCCTCATCTTGTTCTAACTGTGGTAAAAGGACTTAGCGATTCCAAACCCAGCTaGGCTTGGTCCGGGACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ITSFILPHLVLTVVKGLSDSKPS*AWSGTF Trigger: GAAGGTCCCGGACCAAGCGCAGCTGGGTTTGGAATC...GCTAAGTCCTTTTACCACAGTTAGAACAAGATGAGGCAGTATGAATGAAGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129923.2 ENSMUST00000137092.8 ENSMUST00000146282.3 |
||
| CDS-3UTR GCA 90 bp | CCACCTAACACAGTAGTTAATGACAGAAGCACTATAAATCCTTTCAGAGAGGAAGATTCCAAACCCAGCTaGGCTTGGTCCGGGACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PPNTVVNDRSTINPFREEDSKPS*AWSGTF Trigger: GAAGGTCCCGGACCAAGCGCAGCTGGGTTTGGAATC...TTCCTCTCTGAAAGGATTTATAGTGCTTCTGTCATTAACTACTGTGTTAGGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129923.2 ENSMUST00000137092.8 ENSMUST00000146282.3 |
||
| CDS-3UTR GCA 90 bp | CTGACAACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGCAGGTATAACAGTGCCAATGATATaGCCCACCTGTGTCGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LTTQDITLSGRLGAFAGITVPMI*PTCVAS Trigger: AGAAGCGACACAGGTGGGGCATATCATTGGCACTGT...TATACCTGCAAAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | CCCCAAGTCTTACTGAAATTCAAATACTTTGTTCCCACAGTTTTGTACACTCTGAAACCCAGCTGCGCTTaGTCCGGGACCTTCCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: PQVLLKFKYFVPTVLYTLKPSCA*SGTFLT Trigger: AGTCAGGAAGGTCCCGGACCAAGCGCAGCTGGGTTT...CAGAGTGTACAAAACTGTGGGAACAAAGTATTTGAATTTCAGTAAGACTTGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112701.8 |
||
| CDS-3UTR CCA 90 bp | CCACCTAACACAGTAGTTAATGACAGAAGCACTATAAATCCTTTCAGAGAGGAAAAACCCAGCTGCGCTTaGTCCGGGACCTTCCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: PPNTVVNDRSTINPFREEKPSCA*SGTFLT Trigger: AGTCAGGAAGGTCCCGGACCAAGCGCAGCTGGGTTT...TTCCTCTCTGAAAGGATTTATAGTGCTTCTGTCATTAACTACTGTGTTAGGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000129923.2 ENSMUST00000137092.8 ENSMUST00000146282.3 |
||
| CDS-3UTR CCA 90 bp | CTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTGGCTCCCTGACAACAGTCTCTTGGTAGCATaGATATCACCAGTGTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LTEGTMKVRSRCLWLPDNSLLVA*ISPVFS Trigger: TGAGAACACTGGTGATATCCATGCTACCAAGAGACT...GTTGTCAGGGAGCCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | CCTGACAACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGCAGGTATGCTGTTGGAAGAATCTaGGTCATGAGCTGCTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: PDNTGHYFIRQVRCLCRYAVGRI*VMSCYS Trigger: ACTGTAGCAGCTCATGACCCAGATTCTTCCAACAGC...ATACCTGCAAAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | CTGACAACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGCAGGTATAACCTGGGATGGATTCTaGCTCTCCATTGCAAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: LTTQDITLSGRLGAFAGITWDGF*LSIART Trigger: AGTCCTTGCAATGGAGAGCCAGAATCCATCCCAGGT...TATACCTGCAAAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | ATTATTCTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTGGCTCCCTACCTGGGATGGATTCTaGCTCTCCATTGCAAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: IILTEGTMKVRSRCLWLPTWDGF*LSIART Trigger: AGTCCTTGCAATGGAGAGCCAGAATCCATCCCAGGT...AGGGAGCCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAGAATAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCTTAGAGCCATGCTTTTCTTTTGGTTTCATAGTCCATaGCGAACTCAGGTGCGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVLRAMLFFWFHSP*RTQVRC Trigger: ACAACGCACCTGAGTTCGCCATGGACTATGAAACCA...AAAGAAAAGCATGGCTCTAAGGACACACACACACACACACACACACACACACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112701.8 |
||
| CDS-3UTR CCA 90 bp | AGTTTTGCTGTCTCTTATGGCATTGAGGTTTCTCAGCGCAGCCATGTCAAAGGCCGTTTTCACAGACAGTaGTTTCATAGTCCATGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: SFAVSYGIEVSQRSHVKGRFHRQ*FHSPWR Trigger: TCGCCATGGACTATGAAACCACTGTCTGTGAAAACG...GCCTTTGACATGGCTGCGCTGAGAAACCTCAATGCCATAAGAGACAGCAAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134301.2 |
||
| CDS-3UTR CCA 90 bp | CTGACAACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGCAGGTATATCTGCATTGCAGGTCTaGGCTATGCCATCAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LTTQDITLSGRLGAFAGISALQV*AMPSAS Trigger: TGATGCTGATGGCATAGCCCAGACCTGCAATGCAGA...TATACCTGCAAAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | GGCACTATTATTCTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTGGAAGAGAGTCATATGGTaGAGCCCCTGGATCCACATC | + |
|
Preference number: 4 (lower is better) Translates to: GTIILTEGTMKVRSRCLWKRVIW*SPWIHI Trigger: GATGTGGATCCAGGGGCTCCACCATATGACTCTCTT...CCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAGAATAATAGTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| 3UTR CAA 72 bp | TCAGCATCACAGTCACATACACGGATGGTAAGTGTGTaGGTACTGCTTAGTGAAGGAGATCCACTGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SASQSHTRMVSV*VLLSEGDPLST Trigger: TGTGGACAGTGGATCTCCTTCACTAAGCAGTACCAACACACTTACCATCCGTGTATGTGACTGTGATGCTGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| CDS-3UTR TCA 90 bp | CGAGTTTTGCTGTCTCTTATGGCATTGAGGTTTCTCAGCGCAGCCATGTCAAAGAGCCATTTCTTCTCGTaGGTATTGAGGCTGTATTGT | + |
|
Preference number: 4 (lower is better) Translates to: RVLLSLMALRFLSAAMSKSHFFS*VLRLYC Trigger: ACAATACAGCCTCAATACTCACGAGAAGAAATGGCT...CTTTGACATGGCTGCGCTGAGAAACCTCAATGCCATAAGAGACAGCAAAACTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134301.2 |
||
| CDS-3UTR CCA 90 bp | AACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGCAGGTATATGAAACGGGACCTTCCTGACTaGAAGTATGGCTTGGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: NTGHYFIRQVRCLCRYMKRDLPD*KYGLDL Trigger: CAGATCCAAGCCATACTTCCAGTCAGGAAGGTCCCG...TTTCATATACCTGCAAAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000131464.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | AATTTAAGGACACCAGGCAATTTACCTCAAATAACACAACACACATTTACTGGGAAACCCAGCTGCGCTTaGTCCGGGACCTTCCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: NLRTPGNLPQITQHTFTGKPSCA*SGTFLT Trigger: AGTCAGGAAGGTCCCGGACCAAGCGCAGCTGGGTTT...CCCAGTAAATGTGTGTTGTGTTATTTGAGGTAAATTGCCTGGTGTCCTTAAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146282.3 |
||
| CDS-3UTR CCA 90 bp | CTGACAACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGCAGGTATATGTTGTGTCACTGAATaGACCCAAGCTCAGAAACCG | + |
|
Preference number: 4 (lower is better) Translates to: LTTQDITLSGRLGAFAGICCVTE*TQAQKP Trigger: CGGTTTCTGAGCTTGGGTCCATTCAGTGACACAACA...TATACCTGCAAAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | CTGACAACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGCAGGTATAGCTGTTGGAAGAATCTaGGTCATGAGCTGCTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LTTQDITLSGRLGAFAGIAVGRI*VMSCYS Trigger: ACTGTAGCAGCTCATGACCCAGATTCTTCCAACAGC...TATACCTGCAAAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | GGTGTACCAGGCACTATTATTCTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGGTTTCATAGTCCATaGCGAACTCAGGTGCGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GVPGTIILTEGTMKVRSRWFHSP*RTQVRC Trigger: ACAACGCACCTGAGTTCGCCATGGACTATGAAACCA...CCTGGATCTAACTTTCATGGTACCCTCTGTAAGAATAATAGTGCCTGGTACACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | AACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGCAGGTATATGAAACTGGATAACCTGCCCTaGCTGAGCGTTTTCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: NTGHYFIRQVRCLCRYMKLDNLP*LSVFTD Trigger: GTCTGTGAAAACGCTCAGCCAGGGCAGGTTATCCAG...TTTCATATACCTGCAAAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | GGTGTACCAGGCACTATTATTCTTACAGAGGGTACCATGAAAGTTAGATCCAGGATATGGTGGAGCCCCTaGATCCACATCAGCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GVPGTIILTEGTMKVRSRIWWSP*IHISFF Trigger: AAAGAAGCTGATGTGGATCCAGGGGCTCCACCATAT...CCTGGATCTAACTTTCATGGTACCCTCTGTAAGAATAATAGTGCCTGGTACACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR TCA 90 bp | CCACCTAACACAGTAGTTAATGACAGAAGCACTATAAATCCTTTCAGAGAGGAACGTGGCAGCTCAGCTTaGCTCATTCCAGAGAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PPNTVVNDRSTINPFREERGSSA*LIPEKQ Trigger: TTGCTTCTCTGGAATGAGTCAAGCTGAGCTGCCACG...TTCCTCTCTGAAAGGATTTATAGTGCTTCTGTCATTAACTACTGTGTTAGGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129923.2 ENSMUST00000137092.8 ENSMUST00000146282.3 |
||
| CDS-3UTR TCA 90 bp | TTCATACTGCCTCATCTTGTTCTAACTGTGGTAAAAGGACTTAGCAGCATGTTTCGTGGCAGCTCAGCTTaGCTCATTCCAGAGAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FILPHLVLTVVKGLSSMFRGSSA*LIPEKQ Trigger: TTGCTTCTCTGGAATGAGTCAAGCTGAGCTGCCACG...AAACATGCTGCTAAGTCCTTTTACCACAGTTAGAACAAGATGAGGCAGTATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129923.2 ENSMUST00000137092.8 ENSMUST00000146282.3 |
||
| CDS-3UTR TCA 90 bp | TGTCAATTGAATATCTCACAGGGCTGTTGGAAGAATCTGGGTCATGAGCTGCTATACATAGAGGGGATCTaGACCCATGTATTCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CQLNISQGCWKNLGHELLYIEGI*THVFFQ Trigger: CTGGAAGAATACATGGGTTCAGATCCCCTCTATGTA...TAGCAGCTCATGACCCAGATTCTTCCAACAGCCCTGTGAGATATTCAATTGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| CDS-3UTR TCA 90 bp | GCCTTAACAATTAAAAATGGAGACATATTTACAACCTCCTTTTGTCCCAGAAGTCCACAGGCTTGTTGGTaGGTCTGTCCAGAGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ALTIKNGDIFTTSFCPRSPQACW*VCPELG Trigger: CCCAAGCTCTGGACAGACTCACCAACAAGCCTGTGG...ACTTCTGGGACAAAAGGAGGTTGTAAATATGTCTCCATTTTTAATTGTTAAGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR TCA 90 bp | GGCACTATTATTCTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTGGCTTGATAACAAACTCTaGTTCAGGCTCCACAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GTIILTEGTMKVRSRCLWLDNKL*FRLHRL Trigger: AAGCCTGTGGAGCCTGAATCAGAGTTTGTTATCAAG...CCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAGAATAATAGTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR TCA 90 bp | GGCACTATTATTCTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTGGTGTTTTGGGTTCCACTaGGAAATATGGCTGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GTIILTEGTMKVRSRCLWCFGFH*EIWLSL Trigger: CAAGGACAGCCATATTTCTCAGTGGAACCCAAAACA...CCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAGAATAATAGTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR TCA 90 bp | CCAAGTTTTGATAGGCAAGAAGGTCTCAGATTTTTCGAATGGTGTACCAGGCACTGTTTTGGGTTCCACTaGGAAATATGGCTGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PSFDRQEGLRFFEWCTRHCFGFH*EIWLSL Trigger: CAAGGACAGCCATATTTCTCAGTGGAACCCAAAACA...GTGCCTGGTACACCATTCGAAAAATCTGAGACCTTCTTGCCTATCAAAACTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR TCA 90 bp | CTTTGGCTCCCTGACAACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTATCCTTTGCCTGAATaGCAAGCAAATACTGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LWLPDNTGHYFIRQVRCLYPLPE*QANTGL Trigger: AAGACCAGTATTTGCTTGTCATTCAGGCAAAGGATA...AAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAGGGAGCCAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR TCA 90 bp | GCAATGATGCTCTACTGCTGTGCTCTGTCACTCCATTTTCAATGCTTCATGTCCACCATATCCTTTGCCTaGATGACAAGCAAATACTGG | + |
|
Preference number: 4 (lower is better) Translates to: AMMLYCCALSLHFQCFMSTISFA*MTSKYW Trigger: CCAGTATTTGCTTGTCATTCAGGCAAAGGATATGGT...GGACATGAAGCATTGAAAATGGAGTGACAGAGCACAGCAGTAGAGCATCATTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112701.8 |
||
| CDS-3UTR TCA 90 bp | CCTGAACTGAGTGGAGACTTGAGCTCCAAAATAAACACAACACTATGTTTTAAACTGCTACAGTGCCAATaGTATGCCCCACCTGTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: PELSGDLSSKINTTLCFKLLQCQ*YAPPVS Trigger: CGACACAGGTGGGGCATATCATTGGCACTGTAGCAG...TTTAAAACATAGTGTTGTGTTTATTTTGGAGCTCAAGTCTCCACTCAGTTCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112701.8 |
||
| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCTTAGAGCCATGCTTTTCTTTAGCCATTTCTTCTCGTaGGTATTGAGGCTGTATTGT | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVLRAMLFFSHFFS*VLRLYC Trigger: ACAATACAGCCTCAATACTCACGAGAAGAAATGGCT...AAAGAAAAGCATGGCTCTAAGGACACACACACACACACACACACACACACACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112701.8 |
||
| CDS-3UTR TCA 90 bp | ACATCTCTCCGAGTTTTGCTGTCTCTTATGGCATTGAGGTTTCTCAGCGCAGCCATCCACTGTCCACAATaGAAATGGGCAGATAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: TSLRVLLSLMALRFLSAAIHCPQ*KWADNK Trigger: TTTATTATCTGCCCATTTTCATTGTGGACAGTGGAT...GGCTGCGCTGAGAAACCTCAATGCCATAAGAGACAGCAAAACTCGGAGAGATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134301.2 |
||
| CDS-3UTR TCA 90 bp | CTGACAACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGCAGGTATAGGTCGACTCAAGAACTaGATTTCAGGAGTCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: LTTQDITLSGRLGAFAGIGRLKN*ISGVTS Trigger: AGATGTGACTCCTGAAATTCAGTTCTTGAGTCGACC...TATACCTGCAAAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR TCA 90 bp | ATTATTCTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTGGCTCCCTGAGAGATTCAGCTACTaGGCCATTTCCTTCAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: IILTEGTMKVRSRCLWLPERFSY*AISFKC Trigger: GCATTTGAAGGAAATGGCTCAGTAGCTGAATCTCTC...AGGGAGCCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAGAATAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR TCA 90 bp | GGCACTATTATTCTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTGGGAGAGATTCAGCTACTaGGCCATTTCCTTCAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: GTIILTEGTMKVRSRCLWERFSY*AISFKC Trigger: GCATTTGAAGGAAATGGCTCAGTAGCTGAATCTCTC...CCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAGAATAATAGTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR GCA 90 bp | ATTATTCTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTGGCTCCCTATCTGGGTCATGAGCTaGTACAGTGCCAATGATATG | + |
|
Preference number: 4 (lower is better) Translates to: IILTEGTMKVRSRCLWLPIWVMS*YSANDM Trigger: CATATCATTGGCACTGTAGCAGCTCATGACCCAGAT...AGGGAGCCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAGAATAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR GCA 90 bp | CCCCAAGTCTTACTGAAATTCAAATACTTTGTTCCCACAGTTTTGTACACTCTGCATAGGCCTCTGCATTaGAGGTCTGGGCTATGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PQVLLKFKYFVPTVLYTLHRPLH*RSGLCH Trigger: ATGGCATAGCCCAGACCTGCAATGCAGAGGCCTATG...CAGAGTGTACAAAACTGTGGGAACAAAGTATTTGAATTTCAGTAAGACTTGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112701.8 |
||
| CDS-3UTR CCA 90 bp | CCACCTAACACAGTAGTTAATGACAGAAGCACTATAAATCCTTTCAGAGAGGAACGGGACCTTCCTGACTaGAAGTATGGCTTGGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: PPNTVVNDRSTINPFREERDLPD*KYGLDL Trigger: CAGATCCAAGCCATACTTCCAGTCAGGAAGGTCCCG...TTCCTCTCTGAAAGGATTTATAGTGCTTCTGTCATTAACTACTGTGTTAGGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129923.2 ENSMUST00000137092.8 ENSMUST00000146282.3 |
||
| CDS-3UTR CCA 90 bp | TTCATACTGCCTCATCTTGTTCTAACTGTGGTAAAAGGACTTAGCAGCATGTTTCGGGACCTTCCTGACTaGAAGTATGGCTTGGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: FILPHLVLTVVKGLSSMFRDLPD*KYGLDL Trigger: CAGATCCAAGCCATACTTCCAGTCAGGAAGGTCCCG...AAACATGCTGCTAAGTCCTTTTACCACAGTTAGAACAAGATGAGGCAGTATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129923.2 ENSMUST00000137092.8 ENSMUST00000146282.3 |
||
| CDS-3UTR CCA 90 bp | CCAAGTTTTGATAGGCAAGAAGGTCTCAGATTTTTCGAATGGTGTACCAGGCACCGTTTTCACAGACAGTaGTTTCATAGTCCATGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: PSFDRQEGLRFFEWCTRHRFHRQ*FHSPWR Trigger: TCGCCATGGACTATGAAACCACTGTCTGTGAAAACG...GTGCCTGGTACACCATTCGAAAAATCTGAGACCTTCTTGCCTATCAAAACTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | CTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTGGCTCCCTGACAACAAAACTGGTGTCCATTaGATGGCTCATCTTTATCTA | + |
|
Preference number: 4 (lower is better) Translates to: LTEGTMKVRSRCLWLPDNKTGVH*MAHLYL Trigger: TAGATAAAGATGAGCCATCCAATGGACACCAGTTTT...GTTGTCAGGGAGCCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | CTGTCTCTTATGGCATTGAGGTTTCTCAGCGCAGCCATGTCAAAGGCTTCTGTGAAAACTGGTGTCCATTaGATGGCTCATCTTTATCTA | + |
|
Preference number: 4 (lower is better) Translates to: LSLMALRFLSAAMSKASVKTGVH*MAHLYL Trigger: TAGATAAAGATGAGCCATCCAATGGACACCAGTTTT...CACAGAAGCCTTTGACATGGCTGCGCTGAGAAACCTCAATGCCATAAGAGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134301.2 |
||
| 3UTR CAA 72 bp | AAAATTGAACTTGCCCCTTCGCCTGACAAGATGTACTaGATGGAACCGTCTCCTTTATCAACATCAGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KIELAPSPDKMY*MEPSPLSTSEW Trigger: CCACTCTGATGTTGATAAAGGAGACGGTTCCATCAAGTACATCTTGTCAGGCGAAGGGGCAAGTTCAATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| CDS-3UTR TCA 90 bp | CCCCATACCACTAGATACATACACCATGAGCTGATCATCATTTGCCTAATAGCATACATAGAGGGGATCTaGACCCATGTATTCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PHTTRYIHHELIIICLIAYIEGI*THVFFQ Trigger: CTGGAAGAATACATGGGTTCAGATCCCCTCTATGTA...TGCTATTAGGCAAATGATGATCAGCTCATGGTGTATGTATCTAGTGGTATGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000137092.8 ENSMUST00000146282.3 |
||
| CDS-3UTR TCA 90 bp | GGTGTACCAGGCACTATTATTCTTACAGAGGGTACCATGAAAGTTAGATCCAGGACCATATCCTTTGCCTaGATGACAAGCAAATACTGG | + |
|
Preference number: 4 (lower is better) Translates to: GVPGTIILTEGTMKVRSRTISFA*MTSKYW Trigger: CCAGTATTTGCTTGTCATTCAGGCAAAGGATATGGT...CCTGGATCTAACTTTCATGGTACCCTCTGTAAGAATAATAGTGCCTGGTACACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR TCA 90 bp | GTTAGATCCAGGTGCCTTTGGCTCCCTGACAACACAGGACATTACTTTATCAGGATCCACTGTCCACAATaGAAATGGGCAGATAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: VRSRCLWLPDNTGHYFIRIHCPQ*KWADNK Trigger: TTTATTATCTGCCCATTTTCATTGTGGACAGTGGAT...CCTGATAAAGTAATGTCCTGTGTTGTCAGGGAGCCAAAGGCACCTGGATCTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGGTGCCTTTGGCTCCCTGACAACACAGGACATTACTTTATCAGGCAGGTTCTCATCTTTATCTACTaGACTGATTTTCTGGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: SRCLWLPDNTGHYFIRQVLIFIY*TDFLDN Trigger: GTTATCCAGAAAATCAGTGCAGTAGATAAAGATGAG...AACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAGGGAGCCAAAGGCACCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR GCA 90 bp | CCTGAACTGAGTGGAGACTTGAGCTCCAAAATAAACACAACACTATGTTTTAAAGACACAGGCCAGTATTaGTATCAAGGCCCCAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PELSGDLSSKINTTLCFKDTGQY*YQGPSA Trigger: AGCACTGGGGCCTTGATAGCAATACTGGCCTGTGTC...TTTAAAACATAGTGTTGTGTTTATTTTGGAGCTCAAGTCTCCACTCAGTTCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112701.8 |
||
| CDS-3UTR CCA 90 bp | CTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTGGCTCCCTGACAACCACAGGCAAAGATTCTaGAACATTATACTGATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LTEGTMKVRSRCLWLPDNHRQRF*NIILIR Trigger: TCTTATCAGTATAATGTTCCAGAATCTTTGCCTGTG...GTTGTCAGGGAGCCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR TCA 90 bp | AGGAGGAGGGGATTTCCTGAGGGTATTAGGTGTGGCTTTAAATATAGTCAAAATTACATAGAGGGGATCTaGACCCATGTATTCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RRRGFPEGIRCGFKYSQNYIEGI*THVFFQ Trigger: CTGGAAGAATACATGGGTTCAGATCCCCTCTATGTA...ATTTTGACTATATTTAAAGCCACACCTAATACCCTCAGGAAATCCCCTCCTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000129923.2 ENSMUST00000137092.8 ENSMUST00000146282.3 |
||
| CDS-3UTR TCA 90 bp | CACCAGCCTACTTATCCTCCAAATCTCTGTTTGCAATATTTAGTTCTCTGTCCTTACATAGAGGGGATCTaGACCCATGTATTCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HQPTYPPNLCLQYLVLCPYIEGI*THVFFQ Trigger: CTGGAAGAATACATGGGTTCAGATCCCCTCTATGTA...AGGACAGAGAACTAAATATTGCAAACAGAGATTTGGAGGATAAGTAGGCTGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146282.3 |
||
| CDS-3UTR TCA 90 bp | AACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGCAGGTATATGAAATACATAGAGGGGATCTaGACCCATGTATTCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NTGHYFIRQVRCLCRYMKYIEGI*THVFFQ Trigger: CTGGAAGAATACATGGGTTCAGATCCCCTCTATGTA...TTTCATATACCTGCAAAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000131464.8 ENSMUST00000172005.8 |
||
| CDS-3UTR TCA 90 bp | ATTATTCTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTGGCTCCCTTATCCTTTGCCTGAATaGCAAGCAAATACTGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IILTEGTMKVRSRCLWLPYPLPE*QANTGL Trigger: AAGACCAGTATTTGCTTGTCATTCAGGCAAAGGATA...AGGGAGCCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAGAATAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR TCA 90 bp | CCAAGTTTTGATAGGCAAGAAGGTCTCAGATTTTTCGAATGGTGTACCAGGCACTATCCTTTGCCTGAATaGCAAGCAAATACTGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PSFDRQEGLRFFEWCTRHYPLPE*QANTGL Trigger: AAGACCAGTATTTGCTTGTCATTCAGGCAAAGGATA...GTGCCTGGTACACCATTCGAAAAATCTGAGACCTTCTTGCCTATCAAAACTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR TCA 90 bp | CCTGAACTGAGTGGAGACTTGAGCTCCAAAATAAACACAACACTATGTTTTAAAGACAGTCCGCCATTTTaGCCAACCATATCCTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PELSGDLSSKINTTLCFKDSPPF*PTISFA Trigger: GGCAAAGGATATGGTTGGTCAAAATGGCGGACTGTC...TTTAAAACATAGTGTTGTGTTTATTTTGGAGCTCAAGTCTCCACTCAGTTCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112701.8 |
||
| CDS-3UTR TCA 90 bp | GCCTTAACAATTAAAAATGGAGACATATTTACAACCTCCTTTTGTCCCAGAAGTATAACCTGCCCTGGCTaGGCGTTTTCACAGACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ALTIKNGDIFTTSFCPRSITCPG*AFSQTV Trigger: CACTGTCTGTGAAAACGCTCAGCCAGGGCAGGTTAT...ACTTCTGGGACAAAAGGAGGTTGTAAATATGTCTCCATTTTTAATTGTTAAGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR TCA 90 bp | GAAGCCTTAACAATTAAAAATGGAGACATATTTACAACCTCCTTTTGTCCCAGAATAACCTGCCCTGGCTaGGCGTTTTCACAGACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: EALTIKNGDIFTTSFCPRITCPG*AFSQTV Trigger: CACTGTCTGTGAAAACGCTCAGCCAGGGCAGGTTAT...TCTGGGACAAAAGGAGGTTGTAAATATGTCTCCATTTTTAATTGTTAAGGCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR TCA 90 bp | AACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGCAGGTATATGAAAGGTCGACTCAAGAACTaGATTTCAGGAGTCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: NTGHYFIRQVRCLCRYMKGRLKN*ISGVTS Trigger: AGATGTGACTCCTGAAATTCAGTTCTTGAGTCGACC...TTTCATATACCTGCAAAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR TCA 90 bp | AATACTTTGTTCCCACAGTTTTGTACACTCTGTGGCTCAGAAGGACAATGTGTGTGGAATCTAAAGAACTaGGAGATTCAGCTACTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NTLFPQFCTLCGSEGQCVWNLKN*EIQLLS Trigger: GCTCAGTAGCTGAATCTCTCAGTTCTTTAGATTCCA...CACACATTGTCCTTCTGAGCCACAGAGTGTACAAAACTGTGGGAACAAAGTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112701.8 |
||
| CDS-3UTR GCA 90 bp | GTTAGATCCAGGTGCCTTTGGCTCCCTGACAACACAGGACATTACTTTATCAGGATTGACTCCTATATCTaGATCTGCAGCTTTAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: VRSRCLWLPDNTGHYFIRIDSYI*ICSFNS Trigger: AGAATTAAAGCTGCAGATGCAGATATAGGAGTCAAT...CCTGATAAAGTAATGTCCTGTGTTGTCAGGGAGCCAAAGGCACCTGGATCTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR GCA 90 bp | CTTTGGCTCCCTGACAACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTATTGACTCCTATATCTaGATCTGCAGCTTTAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LWLPDNTGHYFIRQVRCLIDSYI*ICSFNS Trigger: AGAATTAAAGCTGCAGATGCAGATATAGGAGTCAAT...AAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAGGGAGCCAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR GCA 90 bp | CCTGAACTGAGTGGAGACTTGAGCTCCAAAATAAACACAACACTATGTTTTAAAACAGTGCCAATGATATaGCCCACCTGTGTCGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PELSGDLSSKINTTLCFKTVPMI*PTCVAS Trigger: AGAAGCGACACAGGTGGGGCATATCATTGGCACTGT...TTTAAAACATAGTGTTGTGTTTATTTTGGAGCTCAAGTCTCCACTCAGTTCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112701.8 |
||
| CDS-3UTR GCA 90 bp | AGTTTTGCTGTCTCTTATGGCATTGAGGTTTCTCAGCGCAGCCATGTCAAAGGCCTCATCTTTATCTACTaGACTGATTTTCTGGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: SFAVSYGIEVSQRSHVKGLIFIY*TDFLDN Trigger: GTTATCCAGAAAATCAGTGCAGTAGATAAAGATGAG...GCCTTTGACATGGCTGCGCTGAGAAACCTCAATGCCATAAGAGACAGCAAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134301.2 |
||
| CDS-3UTR CCA 90 bp | GGCACTATTATTCTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTGGATGACAAGCAAATACTaGTCTTTAGCCTCTCTATCC | + |
|
Preference number: 4 (lower is better) Translates to: GTIILTEGTMKVRSRCLWMTSKY*SLASLS Trigger: GGATAGAGAGGCTAAAGACCAGTATTTGCTTGTCAT...CCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAGAATAATAGTGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | GCCTTAACAATTAAAAATGGAGACATATTTACAACCTCCTTTTGTCCCAGAAGTCTGGATAACCTGCCCTaGCTGAGCGTTTTCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ALTIKNGDIFTTSFCPRSLDNLP*LSVFTD Trigger: GTCTGTGAAAACGCTCAGCCAGGGCAGGTTATCCAG...ACTTCTGGGACAAAAGGAGGTTGTAAATATGTCTCCATTTTTAATTGTTAAGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | AATGGAGACATATTTACAACCTCCTTTTGTCCCAGAAGTGGAATTTCTGTTTACTCTGCATTGCAGGTCTaGGCTATGCCATCAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: NGDIFTTSFCPRSGISVYSALQV*AMPSAS Trigger: TGATGCTGATGGCATAGCCCAGACCTGCAATGCAGA...GTAAACAGAAATTCCACTTCTGGGACAAAAGGAGGTTGTAAATATGTCTCCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | TTACTGAAATTCAAATACTTTGTTCCCACAGTTTTGTACACTCTGTGGCTCAGATCTGCATTGCAGGTCTaGGCTATGCCATCAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LLKFKYFVPTVLYTLWLRSALQV*AMPSAS Trigger: TGATGCTGATGGCATAGCCCAGACCTGCAATGCAGA...TCTGAGCCACAGAGTGTACAAAACTGTGGGAACAAAGTATTTGAATTTCAGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112701.8 |
||
| CDS-3UTR CCA 90 bp | GCCTTAACAATTAAAAATGGAGACATATTTACAACCTCCTTTTGTCCCAGAAGTCTGAAGAGAGTCATATaGTGGAGCCCCTGGATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ALTIKNGDIFTTSFCPRSLKRVI*WSPWIH Trigger: GTGGATCCAGGGGCTCCACCATATGACTCTCTTCAG...ACTTCTGGGACAAAAGGAGGTTGTAAATATGTCTCCATTTTTAATTGTTAAGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR TCA 90 bp | GCCTTAACAATTAAAAATGGAGACATATTTACAACCTCCTTTTGTCCCAGAAGTGAAGAATCTGGGTCATaGGCTGCTACAGTGCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: ALTIKNGDIFTTSFCPRSEESGS*AATVPM Trigger: CATTGGCACTGTAGCAGCTCATGACCCAGATTCTTC...ACTTCTGGGACAAAAGGAGGTTGTAAATATGTCTCCATTTTTAATTGTTAAGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR TCA 90 bp | AACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGCAGGTATATGAAAAGCCATTTCTTCTCGTaGGTATTGAGGCTGTATTGT | + |
|
Preference number: 4 (lower is better) Translates to: NTGHYFIRQVRCLCRYMKSHFFS*VLRLYC Trigger: ACAATACAGCCTCAATACTCACGAGAAGAAATGGCT...TTTCATATACCTGCAAAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR TCA 90 bp | GGTGTACCAGGCACTATTATTCTTACAGAGGGTACCATGAAAGTTAGATCCAGGATCCACTGTCCACAATaGAAATGGGCAGATAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: GVPGTIILTEGTMKVRSRIHCPQ*KWADNK Trigger: TTTATTATCTGCCCATTTTCATTGTGGACAGTGGAT...CCTGGATCTAACTTTCATGGTACCCTCTGTAAGAATAATAGTGCCTGGTACACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR GCA 90 bp | ATTATTCTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTGGCTCCCTACCAACCATATCCTTTaGCTGAATGACAAGCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: IILTEGTMKVRSRCLWLPTNHIL*LNDKQI Trigger: TATTTGCTTGTCATTCAGGCAAAGGATATGGTTGGT...AGGGAGCCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAGAATAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR GCA 90 bp | GCAATGATGCTCTACTGCTGTGCTCTGTCACTCCATTTTCAATGCTTCATGTCCATTGACTCCTATATCTaGATCTGCAGCTTTAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: AMMLYCCALSLHFQCFMSIDSYI*ICSFNS Trigger: AGAATTAAAGCTGCAGATGCAGATATAGGAGTCAAT...GGACATGAAGCATTGAAAATGGAGTGACAGAGCACAGCAGTAGAGCATCATTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112701.8 |
||
| CDS-3UTR CCA 90 bp | TCACTTTGGCACATCTTAACAGCTAGAGAACTTACACATCATTCAATGCTGGCAAGTCTCTTGGTAGCATaGATATCACCAGTGTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLWHILTARELTHHSMLASLLVA*ISPVFS Trigger: TGAGAACACTGGTGATATCCATGCTACCAAGAGACT...TGCCAGCATTGAATGATGTGTAAGTTCTCTAGCTGTTAAGATGTGCCAAAGTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112701.8 |
||
| CDS-3UTR CCA 90 bp | GGTGTACCAGGCACTATTATTCTTACAGAGGGTACCATGAAAGTTAGATCCAGGGTGTATAACTCGTTTTaGCTTCAAAATCGAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GVPGTIILTEGTMKVRSRVYNSF*LQNRVP Trigger: AGGAACTCGATTTTGAAGCCAAAACGAGTTATACAC...CCTGGATCTAACTTTCATGGTACCCTCTGTAAGAATAATAGTGCCTGGTACACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | ATTATTCTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTGGCTCCCTGTGTATAACTCGTTTTaGCTTCAAAATCGAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: IILTEGTMKVRSRCLWLPVYNSF*LQNRVP Trigger: AGGAACTCGATTTTGAAGCCAAAACGAGTTATACAC...AGGGAGCCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAGAATAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | AATGGAGACATATTTACAACCTCCTTTTGTCCCAGAAGTGGAATTTCTGTTTACTGGTTTCATAGTCCATaGCGAACTCAGGTGCGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NGDIFTTSFCPRSGISVYWFHSP*RTQVRC Trigger: ACAACGCACCTGAGTTCGCCATGGACTATGAAACCA...GTAAACAGAAATTCCACTTCTGGGACAAAAGGAGGTTGTAAATATGTCTCCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | CCCCAAGTCTTACTGAAATTCAAATACTTTGTTCCCACAGTTTTGTACACTCTGCGTTTTCACAGACAGTaGTTTCATAGTCCATGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: PQVLLKFKYFVPTVLYTLRFHRQ*FHSPWR Trigger: TCGCCATGGACTATGAAACCACTGTCTGTGAAAACG...CAGAGTGTACAAAACTGTGGGAACAAAGTATTTGAATTTCAGTAAGACTTGGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112701.8 |
||
| CDS-3UTR CCA 90 bp | ATTATTCTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTGGCTCCCTAAAACTGGTGTCCATTaGATGGCTCATCTTTATCTA | + |
|
Preference number: 4 (lower is better) Translates to: IILTEGTMKVRSRCLWLPKTGVH*MAHLYL Trigger: TAGATAAAGATGAGCCATCCAATGGACACCAGTTTT...AGGGAGCCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAGAATAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | TTACTGAAATTCAAATACTTTGTTCCCACAGTTTTGTACACTCTGTGGCTCAGAATATGGTGGAGCCCCTaGATCCACATCAGCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLKFKYFVPTVLYTLWLRIWWSP*IHISFF Trigger: AAAGAAGCTGATGTGGATCCAGGGGCTCCACCATAT...TCTGAGCCACAGAGTGTACAAAACTGTGGGAACAAAGTATTTGAATTTCAGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112701.8 |
||
| CDS-3UTR CCA 90 bp | GCCTTAACAATTAAAAATGGAGACATATTTACAACCTCCTTTTGTCCCAGAAGTAAGAGAGTCATATGGTaGAGCCCCTGGATCCACATC | + |
|
Preference number: 4 (lower is better) Translates to: ALTIKNGDIFTTSFCPRSKRVIW*SPWIHI Trigger: GATGTGGATCCAGGGGCTCCACCATATGACTCTCTT...ACTTCTGGGACAAAAGGAGGTTGTAAATATGTCTCCATTTTTAATTGTTAAGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | CTGACAACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGCAGGTATAGAGTACAAACTCTCTTaGCCATTTCCATACATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LTTQDITLSGRLGAFAGIEYKLS*PFPYIS Trigger: TGAAATGTATGGAAATGGCCAAGAGAGTTTGTACTC...TATACCTGCAAAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR TCA 90 bp | GAAGCCTTAACAATTAAAAATGGAGACATATTTACAACCTCCTTTTGTCCCAGAGAGGTGGGTTATCATTaGCATCAGTTAGGGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: EALTIKNGDIFTTSFCPREVGYH*HQLGSQ Trigger: CTGTGACCCTAACTGATGTCAATGATAACCCACCTC...TCTGGGACAAAAGGAGGTTGTAAATATGTCTCCATTTTTAATTGTTAAGGCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR GCA 90 bp | CCAAGTTTTGATAGGCAAGAAGGTCTCAGATTTTTCGAATGGTGTACCAGGCACTTTGTATTCCATTTCTaGATTGACTCCTATATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PSFDRQEGLRFFEWCTRHFVFHF*IDSYIC Trigger: GCAGATATAGGAGTCAATGCAGAAATGGAATACAAA...GTGCCTGGTACACCATTCGAAAAATCTGAGACCTTCTTGCCTATCAAAACTTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR GCA 90 bp | ATTATTCTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTGGCTCCCTTTTGTATTCCATTTCTaGATTGACTCCTATATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IILTEGTMKVRSRCLWLPFVFHF*IDSYIC Trigger: GCAGATATAGGAGTCAATGCAGAAATGGAATACAAA...AGGGAGCCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAGAATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR GCA 90 bp | TCACTTTGGCACATCTTAACAGCTAGAGAACTTACACATCATTCAATGCTGGCAATTCTGGCTCTCCATTaGAAGGACTGTAATGTTATG | + |
|
Preference number: 4 (lower is better) Translates to: SLWHILTARELTHHSMLAILALH*KDCNVM Trigger: CATAACATTACAGTCCTTGCAATGGAGAGCCAGAAT...TGCCAGCATTGAATGATGTGTAAGTTCTCTAGCTGTTAAGATGTGCCAAAGTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112701.8 |
||
| CDS-3UTR GCA 90 bp | AACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGCAGGTATATGAAAATTCTGGCTCTCCATTaGAAGGACTGTAATGTTATG | + |
|
Preference number: 4 (lower is better) Translates to: NTGHYFIRQVRCLCRYMKILALH*KDCNVM Trigger: CATAACATTACAGTCCTTGCAATGGAGAGCCAGAAT...TTTCATATACCTGCAAAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR GCA 90 bp | GGCACTATTATTCTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTGGCTCATCTTTATCTACTaGACTGATTTTCTGGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: GTIILTEGTMKVRSRCLWLIFIY*TDFLDN Trigger: GTTATCCAGAAAATCAGTGCAGTAGATAAAGATGAG...CCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAGAATAATAGTGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR GCA 90 bp | ATTATTCTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTGGCTCCCTCTCATCTTTATCTACTaGACTGATTTTCTGGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: IILTEGTMKVRSRCLWLPLIFIY*TDFLDN Trigger: GTTATCCAGAAAATCAGTGCAGTAGATAAAGATGAG...AGGGAGCCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAGAATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | CTGACAACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGCAGGTATACACAGGCAAAGATTCTaGAACATTATACTGATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LTTQDITLSGRLGAFAGIHRQRF*NIILIR Trigger: TCTTATCAGTATAATGTTCCAGAATCTTTGCCTGTG...TATACCTGCAAAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | GCCTTAACAATTAAAAATGGAGACATATTTACAACCTCCTTTTGTCCCAGAAGTGCTGTTGGAAGAATCTaGGTCATGAGCTGCTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: ALTIKNGDIFTTSFCPRSAVGRI*VMSCYS Trigger: ACTGTAGCAGCTCATGACCCAGATTCTTCCAACAGC...ACTTCTGGGACAAAAGGAGGTTGTAAATATGTCTCCATTTTTAATTGTTAAGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | AAATTCTTCCAAGTTTTGATAGGCAAGAAGGTCTCAGATTTTTCGAATGGTGTAATCTCACAGGGCTGTTaGAAGAATCTGGGTCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: KFFQVLIGKKVSDFSNGVISQGC*KNLGHE Trigger: CTCATGACCCAGATTCTTCCAACAGCCCTGTGAGAT...TACACCATTCGAAAAATCTGAGACCTTCTTGCCTATCAAAACTTGGAAGAATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | GCCTTAACAATTAAAAATGGAGACATATTTACAACCTCCTTTTGTCCCAGAAGTATCTCACAGGGCTGTTaGAAGAATCTGGGTCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: ALTIKNGDIFTTSFCPRSISQGC*KNLGHE Trigger: CTCATGACCCAGATTCTTCCAACAGCCCTGTGAGAT...ACTTCTGGGACAAAAGGAGGTTGTAAATATGTCTCCATTTTTAATTGTTAAGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | AAATTCTTCCAAGTTTTGATAGGCAAGAAGGTCTCAGATTTTTCGAATGGTGTAATATGGTGGAGCCCCTaGATCCACATCAGCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KFFQVLIGKKVSDFSNGVIWWSP*IHISFF Trigger: AAAGAAGCTGATGTGGATCCAGGGGCTCCACCATAT...TACACCATTCGAAAAATCTGAGACCTTCTTGCCTATCAAAACTTGGAAGAATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| 3UTR CAA 72 bp | ATGATTCCTTCTTGTGTGTCTTTGTCAGCAGATATCTaGAAAATGCCCAGTCCATCACCATCCACTATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: MIPSCVSLSADI*KMPSPSPSTIL Trigger: CAAAATAGTGGATGGTGATGGACTGGGCATTTTCAAGATATCTGCTGACAAAGACACACAAGAAGGAATCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| CDS-3UTR TCA 90 bp | GAAGCCTTAACAATTAAAAATGGAGACATATTTACAACCTCCTTTTGTCCCAGATACATAGAGGGGATCTaGACCCATGTATTCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EALTIKNGDIFTTSFCPRYIEGI*THVFFQ Trigger: CTGGAAGAATACATGGGTTCAGATCCCCTCTATGTA...TCTGGGACAAAAGGAGGTTGTAAATATGTCTCCATTTTTAATTGTTAAGGCTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000131464.8 ENSMUST00000172005.8 |
||
| CDS-3UTR TCA 90 bp | AATGGAGACATATTTACAACCTCCTTTTGTCCCAGAAGTGGAATTTCTGTTTACACCATATCCTTTGCCTaGATGACAAGCAAATACTGG | + |
|
Preference number: 4 (lower is better) Translates to: NGDIFTTSFCPRSGISVYTISFA*MTSKYW Trigger: CCAGTATTTGCTTGTCATTCAGGCAAAGGATATGGT...GTAAACAGAAATTCCACTTCTGGGACAAAAGGAGGTTGTAAATATGTCTCCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR TCA 90 bp | TCACTTTGGCACATCTTAACAGCTAGAGAACTTACACATCATTCAATGCTGGCAATCCACTGTCCACAATaGAAATGGGCAGATAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLWHILTARELTHHSMLAIHCPQ*KWADNK Trigger: TTTATTATCTGCCCATTTTCATTGTGGACAGTGGAT...TGCCAGCATTGAATGATGTGTAAGTTCTCTAGCTGTTAAGATGTGCCAAAGTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112701.8 |
||
| CDS-3UTR TCA 90 bp | AAATTCTTCCAAGTTTTGATAGGCAAGAAGGTCTCAGATTTTTCGAATGGTGTAGGTCGACTCAAGAACTaGATTTCAGGAGTCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: KFFQVLIGKKVSDFSNGVGRLKN*ISGVTS Trigger: AGATGTGACTCCTGAAATTCAGTTCTTGAGTCGACC...TACACCATTCGAAAAATCTGAGACCTTCTTGCCTATCAAAACTTGGAAGAATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR TCA 90 bp | AAATTCTTCCAAGTTTTGATAGGCAAGAAGGTCTCAGATTTTTCGAATGGTGTAGAGAGATTCAGCTACTaGGCCATTTCCTTCAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: KFFQVLIGKKVSDFSNGVERFSY*AISFKC Trigger: GCATTTGAAGGAAATGGCTCAGTAGCTGAATCTCTC...TACACCATTCGAAAAATCTGAGACCTTCTTGCCTATCAAAACTTGGAAGAATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR GCA 90 bp | AACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGCAGGTATATGAAAACCAACCATATCCTTTaGCTGAATGACAAGCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: NTGHYFIRQVRCLCRYMKTNHIL*LNDKQI Trigger: TATTTGCTTGTCATTCAGGCAAAGGATATGGTTGGT...TTTCATATACCTGCAAAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR GCA 90 bp | GAAGCCTTAACAATTAAAAATGGAGACATATTTACAACCTCCTTTTGTCCCAGAATCTGGGTCATGAGCTaGTACAGTGCCAATGATATG | + |
|
Preference number: 4 (lower is better) Translates to: EALTIKNGDIFTTSFCPRIWVMS*YSANDM Trigger: CATATCATTGGCACTGTAGCAGCTCATGACCCAGAT...TCTGGGACAAAAGGAGGTTGTAAATATGTCTCCATTTTTAATTGTTAAGGCTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | AATGGAGACATATTTACAACCTCCTTTTGTCCCAGAAGTGGAATTTCTGTTTACAGTCTCTTGGTAGCATaGATATCACCAGTGTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NGDIFTTSFCPRSGISVYSLLVA*ISPVFS Trigger: TGAGAACACTGGTGATATCCATGCTACCAAGAGACT...GTAAACAGAAATTCCACTTCTGGGACAAAAGGAGGTTGTAAATATGTCTCCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | AACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGCAGGTATATGAAAGAGTACAAACTCTCTTaGCCATTTCCATACATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NTGHYFIRQVRCLCRYMKEYKLS*PFPYIS Trigger: TGAAATGTATGGAAATGGCCAAGAGAGTTTGTACTC...TTTCATATACCTGCAAAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR TCA 90 bp | GAAGCCTTAACAATTAAAAATGGAGACATATTTACAACCTCCTTTTGTCCCAGAAGCCATTTCTTCTCGTaGGTATTGAGGCTGTATTGT | + |
|
Preference number: 4 (lower is better) Translates to: EALTIKNGDIFTTSFCPRSHFFS*VLRLYC Trigger: ACAATACAGCCTCAATACTCACGAGAAGAAATGGCT...TCTGGGACAAAAGGAGGTTGTAAATATGTCTCCATTTTTAATTGTTAAGGCTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR GCA 90 bp | AATGGAGACATATTTACAACCTCCTTTTGTCCCAGAAGTGGAATTTCTGTTTACATTCTGGCTCTCCATTaGAAGGACTGTAATGTTATG | + |
|
Preference number: 4 (lower is better) Translates to: NGDIFTTSFCPRSGISVYILALH*KDCNVM Trigger: CATAACATTACAGTCCTTGCAATGGAGAGCCAGAAT...GTAAACAGAAATTCCACTTCTGGGACAAAAGGAGGTTGTAAATATGTCTCCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | AATGGAGACATATTTACAACCTCCTTTTGTCCCAGAAGTGGAATTTCTGTTTACATGACAAGCAAATACTaGTCTTTAGCCTCTCTATCC | + |
|
Preference number: 4 (lower is better) Translates to: NGDIFTTSFCPRSGISVYMTSKY*SLASLS Trigger: GGATAGAGAGGCTAAAGACCAGTATTTGCTTGTCAT...GTAAACAGAAATTCCACTTCTGGGACAAAAGGAGGTTGTAAATATGTCTCCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | AACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGCAGGTATATGAAACACAGGCAAAGATTCTaGAACATTATACTGATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: NTGHYFIRQVRCLCRYMKHRQRF*NIILIR Trigger: TCTTATCAGTATAATGTTCCAGAATCTTTGCCTGTG...TTTCATATACCTGCAAAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| 3UTR CAA 72 bp | TCCTTTTGTATTGTAATGATTCCTTCTTGTGTGTCTTaGTCAGCAGATATCTTGAAAATGCCCAGTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: SFCIVMIPSCVS*SADILKMPSPS Trigger: TGATGGACTGGGCATTTTCAAGATATCTGCTGACAAAGACACACAAGAAGGAATCATTACAATACAAAAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| CDS-3UTR GCA 90 bp | AATGGAGACATATTTACAACCTCCTTTTGTCCCAGAAGTGGAATTTCTGTTTACACCAACCATATCCTTTaGCTGAATGACAAGCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: NGDIFTTSFCPRSGISVYTNHIL*LNDKQI Trigger: TATTTGCTTGTCATTCAGGCAAAGGATATGGTTGGT...GTAAACAGAAATTCCACTTCTGGGACAAAAGGAGGTTGTAAATATGTCTCCATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | GAAGCCTTAACAATTAAAAATGGAGACATATTTACAACCTCCTTTTGTCCCAGAATGACAAGCAAATACTaGTCTTTAGCCTCTCTATCC | + |
|
Preference number: 4 (lower is better) Translates to: EALTIKNGDIFTTSFCPRMTSKY*SLASLS Trigger: GGATAGAGAGGCTAAAGACCAGTATTTGCTTGTCAT...TCTGGGACAAAAGGAGGTTGTAAATATGTCTCCATTTTTAATTGTTAAGGCTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | AATGGAGACATATTTACAACCTCCTTTTGTCCCAGAAGTGGAATTTCTGTTTACAAAACTGGTGTCCATTaGATGGCTCATCTTTATCTA | + |
|
Preference number: 4 (lower is better) Translates to: NGDIFTTSFCPRSGISVYKTGVH*MAHLYL Trigger: TAGATAAAGATGAGCCATCCAATGGACACCAGTTTT...GTAAACAGAAATTCCACTTCTGGGACAAAAGGAGGTTGTAAATATGTCTCCATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | GAAGCCTTAACAATTAAAAATGGAGACATATTTACAACCTCCTTTTGTCCCAGAGTGTATAACTCGTTTTaGCTTCAAAATCGAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: EALTIKNGDIFTTSFCPRVYNSF*LQNRVP Trigger: AGGAACTCGATTTTGAAGCCAAAACGAGTTATACAC...TCTGGGACAAAAGGAGGTTGTAAATATGTCTCCATTTTTAATTGTTAAGGCTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CCA 90 bp | AAATTCTTCCAAGTTTTGATAGGCAAGAAGGTCTCAGATTTTTCGAATGGTGTAGAGTACAAACTCTCTTaGCCATTTCCATACATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KFFQVLIGKKVSDFSNGVEYKLS*PFPYIS Trigger: TGAAATGTATGGAAATGGCCAAGAGAGTTTGTACTC...TACACCATTCGAAAAATCTGAGACCTTCTTGCCTATCAAAACTTGGAAGAATTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| 3UTR CAA 72 bp | TATGTGAGTCTTAGGGATCAAATTCACATTAGTGCTTaGTGGCAAGTGACTTTACCTCCATTATTTTTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: YVSLRDQIHISA*WQVTLPPLFFY Trigger: GTAGAAAAATAATGGAGGTAAAGTCACTTGCCACAAAGCACTAATGTGAATTTGATCCCTAAGACTCACATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146282.3 |
||
| 3UTR CAA 72 bp | TATAATCACCAGCCTACTTATCCTCCAAATCTCTGTTaGCAATATTTAGTTCTCTGTCCTACAAGAACATCT | + |
|
Preference number: 4 (lower is better) Translates to: YNHQPTYPPNLC*QYLVLCPTRTS Trigger: AGATGTTCTTGTAGGACAGAGAACTAAATATTGCAAACAGAGATTTGGAGGATAAGTAGGCTGGTGATTATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146282.3 |
||
| CDS-3UTR GCA 90 bp | GCCTTAACAATTAAAAATGGAGACATATTTACAACCTCCTTTTGTCCCAGAAGTTTTGTATTCCATTTCTaGATTGACTCCTATATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ALTIKNGDIFTTSFCPRSFVFHF*IDSYIC Trigger: GCAGATATAGGAGTCAATGCAGAAATGGAATACAAA...ACTTCTGGGACAAAAGGAGGTTGTAAATATGTCTCCATTTTTAATTGTTAAGGC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS CCA 90 bp | CCCAGCTGCGCTTGGTCCGGGACCTTCCTGACTGGAAGTATGGCTTaGATCTGGACCGTGGCAGCTCAGCTTGACTCATTCCAGAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: PSCAWSGTFLTGSMA*IWTVAAQLDSFQRS Trigger: GCTTCTCTGGAATGAGTCAAGCTGAGCTGCCACGGTCCAGATCCAAGCCATACTTCCAGTCAGGAAGGTCCCGGACCAAGCGCAGCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000129923.2 ENSMUST00000131464.8 ENSMUST00000137092.8 ENSMUST00000145188.2 ENSMUST00000146282.3 ENSMUST00000172005.8 |
||
| CDS CCA 90 bp | TGCGCTTGGTCCGGGACCTTCCTGACTGGAAGTATGGCTTGGATCTaGACCGTGGCAGCTCAGCTTGACTCATTCCAGAGAAGCAAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: CAWSGTFLTGSMAWI*TVAAQLDSFQRSKG Trigger: TCCTTTGCTTCTCTGGAATGAGTCAAGCTGAGCTGCCACGGTCCAGATCCAAGCCATACTTCCAGTCAGGAAGGTCCCGGACCAAGCGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000129923.2 ENSMUST00000131464.8 ENSMUST00000137092.8 ENSMUST00000145188.2 ENSMUST00000146282.3 ENSMUST00000172005.8 |
||
| CDS-3UTR CAA 90 bp | GTTAGATCCAGGTGCCTTTGGCTCCCTGACAACACAGGACATTACTTTATCAGGCAAACCCAGCTGCGCTaGGTCCGGGACCTTCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: VRSRCLWLPDNTGHYFIRQTQLR*VRDLPD Trigger: GTCAGGAAGGTCCCGGACCAAGCGCAGCTGGGTTTG...CCTGATAAAGTAATGTCCTGTGTTGTCAGGGAGCCAAAGGCACCTGGATCTAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000131464.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CAA 90 bp | GGCACTATTATTCTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTGGCAAACCCAGCTGCGCTaGGTCCGGGACCTTCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: GTIILTEGTMKVRSRCLWQTQLR*VRDLPD Trigger: GTCAGGAAGGTCCCGGACCAAGCGCAGCTGGGTTTG...CCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAGAATAATAGTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000131464.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CAA 90 bp | ATATGGTGGAGCCCCTGGATCCACATCAGCTTCTTTCAGTCTTTCCCAAATAAACAAACCCAGCTGCGCTaGGTCCGGGACCTTCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: IWWSPWIHISFFQSFPNKQTQLR*VRDLPD Trigger: GTCAGGAAGGTCCCGGACCAAGCGCAGCTGGGTTTG...TTTATTTGGGAAAGACTGAAAGAAGCTGATGTGGATCCAGGGGCTCCACCATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131464.8 |
||
| CDS-3UTR CAA 90 bp | GGTGTACCAGGCACTATTATTCTTACAGAGGGTACCATGAAAGTTAGATCCAGGCAAACCCAGCTGCGCTaGGTCCGGGACCTTCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: GVPGTIILTEGTMKVRSRQTQLR*VRDLPD Trigger: GTCAGGAAGGTCCCGGACCAAGCGCAGCTGGGTTTG...CCTGGATCTAACTTTCATGGTACCCTCTGTAAGAATAATAGTGCCTGGTACACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000131464.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CAA 90 bp | CTTTGGCTCCCTGACAACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTGGCTCCACAGGCTTGTaGGTGAGTCTGTCCAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LWLPDNTGHYFIRQVRCLGSTGL*VSLSRA Trigger: AGCTCTGGACAGACTCACCAACAAGCCTGTGGAGCC...AAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAGGGAGCCAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CAA 90 bp | GTTAGATCCAGGTGCCTTTGGCTCCCTGACAACACAGGACATTACTTTATCAGGTCAGGCTCCACAGGCTaGTTGGTGAGTCTGTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VRSRCLWLPDNTGHYFIRSGSTG*LVSLSR Trigger: TCTGGACAGACTCACCAACAAGCCTGTGGAGCCTGA...CCTGATAAAGTAATGTCCTGTGTTGTCAGGGAGCCAAAGGCACCTGGATCTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS TCA 90 bp | CCTGACTGGAAGTATGGCTTGGATCTGGACCGTGGCAGCTCAGCTTaGCTCATTCCAGAGAAGCAAAGGAAGAGAGCTATAAGCTGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: PDWKYGLDLDRGSSA*LIPEKQRKRAISCR Trigger: TCTACAGCTTATAGCTCTCTTCCTTTGCTTCTCTGGAATGAGTCAAGCTGAGCTGCCACGGTCCAGATCCAAGCCATACTTCCAGTCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000129923.2 ENSMUST00000131464.8 ENSMUST00000137092.8 ENSMUST00000145188.2 ENSMUST00000146282.3 ENSMUST00000172005.8 |
||
| CDS-3UTR CAA 90 bp | CCTGACAACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGCAGGTATCCGTGGCAGCTCAGCTaGACTCATTCCAGAGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PDNTGHYFIRQVRCLCRYPWQLS*THSREA Trigger: TGCTTCTCTGGAATGAGTCAAGCTGAGCTGCCACGG...ATACCTGCAAAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000131464.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGGAGGGGATTTCCTGAGGGTATTAGGTGTGGCTTTAAATATAGTCAAAATCAAACCCAGCTGCGCTaGGTCCGGGACCTTCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: RRRGFPEGIRCGFKYSQNQTQLR*VRDLPD Trigger: GTCAGGAAGGTCCCGGACCAAGCGCAGCTGGGTTTG...ATTTTGACTATATTTAAAGCCACACCTAATACCCTCAGGAAATCCCCTCCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000129923.2 ENSMUST00000137092.8 ENSMUST00000146282.3 |
||
| CDS-3UTR CAA 90 bp | CCTGACAACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGCAGGTATTCAGGCTCCACAGGCTaGTTGGTGAGTCTGTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PDNTGHYFIRQVRCLCRYSGSTG*LVSLSR Trigger: TCTGGACAGACTCACCAACAAGCCTGTGGAGCCTGA...ATACCTGCAAAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CAA 90 bp | GGCACTATTATTCTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTGGCCGTGGCAGCTCAGCTaGACTCATTCCAGAGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GTIILTEGTMKVRSRCLWPWQLS*THSREA Trigger: TGCTTCTCTGGAATGAGTCAAGCTGAGCTGCCACGG...CCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAGAATAATAGTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000131464.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CAA 90 bp | TTCATACTGCCTCATCTTGTTCTAACTGTGGTAAAAGGACTTAGCAGCATGTTTCAAACCCAGCTGCGCTaGGTCCGGGACCTTCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: FILPHLVLTVVKGLSSMFQTQLR*VRDLPD Trigger: GTCAGGAAGGTCCCGGACCAAGCGCAGCTGGGTTTG...AAACATGCTGCTAAGTCCTTTTACCACAGTTAGAACAAGATGAGGCAGTATGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129923.2 ENSMUST00000137092.8 ENSMUST00000146282.3 |
||
| CDS-3UTR CAA 90 bp | GTAAGAAGTAGCCCTTCAATTCTTGAACTTATGATTCTCCCATTCTACTTCGCACAAACCCAGCTGCGCTaGGTCCGGGACCTTCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: VRSSPSILELMILPFYFAQTQLR*VRDLPD Trigger: GTCAGGAAGGTCCCGGACCAAGCGCAGCTGGGTTTG...TGCGAAGTAGAATGGGAGAATCATAAGTTCAAGAATTGAAGGGCTACTTCTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146282.3 |
||
| CDS-3UTR CAA 90 bp | CTGTCTCTTATGGCATTGAGGTTTCTCAGCGCAGCCATGTCAAAGGCTTCTGTGCGGATGGTAAGTGTGTaGGTACTGCTTAGTGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LSLMALRFLSAAMSKASVRMVSV*VLLSEG Trigger: TCCTTCACTAAGCAGTACCAACACACTTACCATCCG...CACAGAAGCCTTTGACATGGCTGCGCTGAGAAACCTCAATGCCATAAGAGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134301.2 |
||
| CDS-3UTR CAA 90 bp | CTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTGGCTCCCTGACAACCGGATGGTAAGTGTGTaGGTACTGCTTAGTGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LTEGTMKVRSRCLWLPDNRMVSV*VLLSEG Trigger: TCCTTCACTAAGCAGTACCAACACACTTACCATCCG...GTTGTCAGGGAGCCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CAA 90 bp | CTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTGGCTCCCTGACAACCCTGACAAGATGTACTaGATGGAACCGTCTCCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: LTEGTMKVRSRCLWLPDNPDKMY*MEPSPL Trigger: TAAAGGAGACGGTTCCATCAAGTACATCTTGTCAGG...GTTGTCAGGGAGCCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CAA 90 bp | GGCACTATTATTCTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTGGCTGTCTCTTATGGCATaGAGGTTTCTCAGCGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GTIILTEGTMKVRSRCLWLSLMA*RFLSAA Trigger: GGCTGCGCTGAGAAACCTCAATGCCATAAGAGACAG...CCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAGAATAATAGTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CAA 90 bp | CCAAGTTTTGATAGGCAAGAAGGTCTCAGATTTTTCGAATGGTGTACCAGGCACCTGTCTCTTATGGCATaGAGGTTTCTCAGCGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PSFDRQEGLRFFEWCTRHLSLMA*RFLSAA Trigger: GGCTGCGCTGAGAAACCTCAATGCCATAAGAGACAG...GTGCCTGGTACACCATTCGAAAAATCTGAGACCTTCTTGCCTATCAAAACTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CAA 90 bp | ATTATTCTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTGGCTCCCTTCCCGATCCAGTCTCTaGGTAGCATGGATATCACCA | + |
|
Preference number: 5 (lower is better) Translates to: IILTEGTMKVRSRCLWLPSRSSL*VAWISP Trigger: TGGTGATATCCATGCTACCAAGAGACTGGATCGGGA...AGGGAGCCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAGAATAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CAA 90 bp | CCCCAAGTCTTACTGAAATTCAAATACTTTGTTCCCACAGTTTTGTACACTCTGGGCTCCACAGGCTTGTaGGTGAGTCTGTCCAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PQVLLKFKYFVPTVLYTLGSTGL*VSLSRA Trigger: AGCTCTGGACAGACTCACCAACAAGCCTGTGGAGCC...CAGAGTGTACAAAACTGTGGGAACAAAGTATTTGAATTTCAGTAAGACTTGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112701.8 |
||
| CDS-3UTR CAA 90 bp | GGCACTATTATTCTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTGGACCACTCGAGCACTGTaGCCATATGTAGGATCATCG | + |
|
Preference number: 5 (lower is better) Translates to: GTIILTEGTMKVRSRCLWTTRAL*PYVGSS Trigger: CGATGATCCTACATATGGCAACAGTGCTCGAGTGGT...CCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAGAATAATAGTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CAA 90 bp | CTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTGGCTCCCTGACAACCTGTGTTTCTGTCAATaGAATATCTCACAGGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LTEGTMKVRSRCLWLPDNLCFCQ*NISQGC Trigger: ACAGCCCTGTGAGATATTCAATTGACAGAAACACAG...GTTGTCAGGGAGCCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CAA 90 bp | CCACCTAACACAGTAGTTAATGACAGAAGCACTATAAATCCTTTCAGAGAGGAACCGTGGCAGCTCAGCTaGACTCATTCCAGAGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PPNTVVNDRSTINPFREEPWQLS*THSREA Trigger: TGCTTCTCTGGAATGAGTCAAGCTGAGCTGCCACGG...TTCCTCTCTGAAAGGATTTATAGTGCTTCTGTCATTAACTACTGTGTTAGGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129923.2 ENSMUST00000137092.8 ENSMUST00000146282.3 |
||
| CDS-3UTR CAA 90 bp | TTCATACTGCCTCATCTTGTTCTAACTGTGGTAAAAGGACTTAGCAGCATGTTTCCGTGGCAGCTCAGCTaGACTCATTCCAGAGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: FILPHLVLTVVKGLSSMFPWQLS*THSREA Trigger: TGCTTCTCTGGAATGAGTCAAGCTGAGCTGCCACGG...AAACATGCTGCTAAGTCCTTTTACCACAGTTAGAACAAGATGAGGCAGTATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129923.2 ENSMUST00000137092.8 ENSMUST00000146282.3 |
||
| CDS-3UTR CAA 90 bp | GCAATGATGCTCTACTGCTGTGCTCTGTCACTCCATTTTCAATGCTTCATGTCCCCTGACAAGATGTACTaGATGGAACCGTCTCCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: AMMLYCCALSLHFQCFMSPDKMY*MEPSPL Trigger: TAAAGGAGACGGTTCCATCAAGTACATCTTGTCAGG...GGACATGAAGCATTGAAAATGGAGTGACAGAGCACAGCAGTAGAGCATCATTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112701.8 |
||
| CDS-3UTR CAA 90 bp | AATACTTTGTTCCCACAGTTTTGTACACTCTGTGGCTCAGAAGGACAATGTGTGACCACTCGAGCACTGTaGCCATATGTAGGATCATCG | + |
|
Preference number: 5 (lower is better) Translates to: NTLFPQFCTLCGSEGQCVTTRAL*PYVGSS Trigger: CGATGATCCTACATATGGCAACAGTGCTCGAGTGGT...CACACATTGTCCTTCTGAGCCACAGAGTGTACAAAACTGTGGGAACAAAGTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112701.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGGTGCCTTTGGCTCCCTGACAACACAGGACATTACTTTATCAGGCAGGTTTTGATGACTCCTGTTTaGGGTTCCACTGAGAAATAT | + |
|
Preference number: 5 (lower is better) Translates to: SRCLWLPDNTGHYFIRQVLMTPV*GSTEKY Trigger: ATATTTCTCAGTGGAACCCAAAACAGGAGTCATCAA...AACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAGGGAGCCAAAGGCACCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CAA 90 bp | GGTGTACCAGGCACTATTATTCTTACAGAGGGTACCATGAAAGTTAGATCCAGGTTTGGAAGGGCAGTCTaGATGACTCCTGTTTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: GVPGTIILTEGTMKVRSRFGRAV*MTPVLG Trigger: ACCCAAAACAGGAGTCATCAAGACTGCCCTTCCAAA...CCTGGATCTAACTTTCATGGTACCCTCTGTAAGAATAATAGTGCCTGGTACACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CAA 90 bp | GTTAGATCCAGGTGCCTTTGGCTCCCTGACAACACAGGACATTACTTTATCAGGCTGTGTTTCTGTCAATaGAATATCTCACAGGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VRSRCLWLPDNTGHYFIRLCFCQ*NISQGC Trigger: ACAGCCCTGTGAGATATTCAATTGACAGAAACACAG...CCTGATAAAGTAATGTCCTGTGTTGTCAGGGAGCCAAAGGCACCTGGATCTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CAA 90 bp | CCTGAACTGAGTGGAGACTTGAGCTCCAAAATAAACACAACACTATGTTTTAAACCGTGGCAGCTCAGCTaGACTCATTCCAGAGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PELSGDLSSKINTTLCFKPWQLS*THSREA Trigger: TGCTTCTCTGGAATGAGTCAAGCTGAGCTGCCACGG...TTTAAAACATAGTGTTGTGTTTATTTTGGAGCTCAAGTCTCCACTCAGTTCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112701.8 |
||
| CDS-3UTR CAA 90 bp | GGTGTACCAGGCACTATTATTCTTACAGAGGGTACCATGAAAGTTAGATCCAGGCCTGACAAGATGTACTaGATGGAACCGTCTCCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: GVPGTIILTEGTMKVRSRPDKMY*MEPSPL Trigger: TAAAGGAGACGGTTCCATCAAGTACATCTTGTCAGG...CCTGGATCTAACTTTCATGGTACCCTCTGTAAGAATAATAGTGCCTGGTACACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CAA 90 bp | GAAGCCTTAACAATTAAAAATGGAGACATATTTACAACCTCCTTTTGTCCCAGAGGCTCCACAGGCTTGTaGGTGAGTCTGTCCAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: EALTIKNGDIFTTSFCPRGSTGL*VSLSRA Trigger: AGCTCTGGACAGACTCACCAACAAGCCTGTGGAGCC...TCTGGGACAAAAGGAGGTTGTAAATATGTCTCCATTTTTAATTGTTAAGGCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CAA 90 bp | CTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTGGCTCCCTGACAACTCACCATCCACTATTTaGTATTCCATTTCTGCATTG | + |
|
Preference number: 5 (lower is better) Translates to: LTEGTMKVRSRCLWLPDNSPSTI*YSISAL Trigger: CAATGCAGAAATGGAATACAAAATAGTGGATGGTGA...GTTGTCAGGGAGCCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CAA 90 bp | CTTTGGCTCCCTGACAACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGTTATGAACCGCATTaGTCTCTCGATCCAATGATT | + |
|
Preference number: 5 (lower is better) Translates to: LWLPDNTGHYFIRQVRCLCYEPH*SLDPMI Trigger: AATCATTGGATCGAGAGACAAATGCGGTTCATAACA...AAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAGGGAGCCAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CAA 90 bp | AAATTCTTCCAAGTTTTGATAGGCAAGAAGGTCTCAGATTTTTCGAATGGTGTATCAGGCTCCACAGGCTaGTTGGTGAGTCTGTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KFFQVLIGKKVSDFSNGVSGSTG*LVSLSR Trigger: TCTGGACAGACTCACCAACAAGCCTGTGGAGCCTGA...TACACCATTCGAAAAATCTGAGACCTTCTTGCCTATCAAAACTTGGAAGAATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CAA 90 bp | GTTAGATCCAGGTGCCTTTGGCTCCCTGACAACACAGGACATTACTTTATCAGGTCACCATCCACTATTTaGTATTCCATTTCTGCATTG | + |
|
Preference number: 5 (lower is better) Translates to: VRSRCLWLPDNTGHYFIRSPSTI*YSISAL Trigger: CAATGCAGAAATGGAATACAAAATAGTGGATGGTGA...CCTGATAAAGTAATGTCCTGTGTTGTCAGGGAGCCAAAGGCACCTGGATCTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CAA 90 bp | CTGACAACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGCAGGTATATTGTCAGCAGATATCTaGAAAATGCCCAGTCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: LTTQDITLSGRLGAFAGILSADI*KMPSPS Trigger: TGATGGACTGGGCATTTTCAAGATATCTGCTGACAA...TATACCTGCAAAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CAA 90 bp | CCTGACAACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGCAGGTATTGTTATGAACCGCATTaGTCTCTCGATCCAATGATT | + |
|
Preference number: 5 (lower is better) Translates to: PDNTGHYFIRQVRCLCRYCYEPH*SLDPMI Trigger: AATCATTGGATCGAGAGACAAATGCGGTTCATAACA...ATACCTGCAAAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CAA 90 bp | CCTGAACTGAGTGGAGACTTGAGCTCCAAAATAAACACAACACTATGTTTTAAACTGTCTCTTATGGCATaGAGGTTTCTCAGCGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PELSGDLSSKINTTLCFKLSLMA*RFLSAA Trigger: GGCTGCGCTGAGAAACCTCAATGCCATAAGAGACAG...TTTAAAACATAGTGTTGTGTTTATTTTGGAGCTCAAGTCTCCACTCAGTTCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112701.8 |
||
| CDS-3UTR CAA 90 bp | TTACTGAAATTCAAATACTTTGTTCCCACAGTTTTGTACACTCTGTGGCTCAGATCCCGATCCAGTCTCTaGGTAGCATGGATATCACCA | + |
|
Preference number: 5 (lower is better) Translates to: LLKFKYFVPTVLYTLWLRSRSSL*VAWISP Trigger: TGGTGATATCCATGCTACCAAGAGACTGGATCGGGA...TCTGAGCCACAGAGTGTACAAAACTGTGGGAACAAAGTATTTGAATTTCAGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112701.8 |
||
| CDS-3UTR CAA 90 bp | AATGGAGACATATTTACAACCTCCTTTTGTCCCAGAAGTGGAATTTCTGTTTACTCCCGATCCAGTCTCTaGGTAGCATGGATATCACCA | + |
|
Preference number: 5 (lower is better) Translates to: NGDIFTTSFCPRSGISVYSRSSL*VAWISP Trigger: TGGTGATATCCATGCTACCAAGAGACTGGATCGGGA...GTAAACAGAAATTCCACTTCTGGGACAAAAGGAGGTTGTAAATATGTCTCCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CAA 90 bp | CCCCAAGTCTTACTGAAATTCAAATACTTTGTTCCCACAGTTTTGTACACTCTGTTTGGAAGGGCAGTCTaGATGACTCCTGTTTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: PQVLLKFKYFVPTVLYTLFGRAV*MTPVLG Trigger: ACCCAAAACAGGAGTCATCAAGACTGCCCTTCCAAA...CAGAGTGTACAAAACTGTGGGAACAAAGTATTTGAATTTCAGTAAGACTTGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112701.8 |
||
| CDS-3UTR CAA 90 bp | ATTATTCTTACAGAGGGTACCATGAAAGTTAGATCCAGGTGCCTTTGGCTCCCTCCTTCTTGTGTGTCTTaGTCAGCAGATATCTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: IILTEGTMKVRSRCLWLPPSCVS*SADILK Trigger: TTTCAAGATATCTGCTGACAAAGACACACAAGAAGG...AGGGAGCCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTGTAAGAATAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CAA 90 bp | AATGTGTTTAGAGCAAAGAAGGCTGAGCAACAGGTCCTTGAAAGTCTTTGGAGCCCTTCTTGTGTGTCTTaGTCAGCAGATATCTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: NVFRAKKAEQQVLESLWSPSCVS*SADILK Trigger: TTTCAAGATATCTGCTGACAAAGACACACAAGAAGG...GCTCCAAAGACTTTCAAGGACCTGTTGCTCAGCCTTCTTTGCTCTAAACACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112701.8 |
||
| CDS-3UTR CAA 90 bp | CCAAGTTTTGATAGGCAAGAAGGTCTCAGATTTTTCGAATGGTGTACCAGGCACTGTTATGAACCGCATTaGTCTCTCGATCCAATGATT | + |
|
Preference number: 5 (lower is better) Translates to: PSFDRQEGLRFFEWCTRHCYEPH*SLDPMI Trigger: AATCATTGGATCGAGAGACAAATGCGGTTCATAACA...GTGCCTGGTACACCATTCGAAAAATCTGAGACCTTCTTGCCTATCAAAACTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CAA 90 bp | AAATTCTTCCAAGTTTTGATAGGCAAGAAGGTCTCAGATTTTTCGAATGGTGTAACCACTCGAGCACTGTaGCCATATGTAGGATCATCG | + |
|
Preference number: 5 (lower is better) Translates to: KFFQVLIGKKVSDFSNGVTTRAL*PYVGSS Trigger: CGATGATCCTACATATGGCAACAGTGCTCGAGTGGT...TACACCATTCGAAAAATCTGAGACCTTCTTGCCTATCAAAACTTGGAAGAATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CAA 90 bp | AATGGAGACATATTTACAACCTCCTTTTGTCCCAGAAGTGGAATTTCTGTTTACAGACAGTCCGCCATTTaGACCAACCATATCCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: NGDIFTTSFCPRSGISVYRQSAI*TNHILC Trigger: GCAAAGGATATGGTTGGTCAAAATGGCGGACTGTCT...GTAAACAGAAATTCCACTTCTGGGACAAAAGGAGGTTGTAAATATGTCTCCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CAA 90 bp | CTGACAACACAGGACATTACTTTATCAGGCAGGTTAGGTGCCTTTGCAGGTATATCACCATCCACTATTTaGTATTCCATTTCTGCATTG | + |
|
Preference number: 5 (lower is better) Translates to: LTTQDITLSGRLGAFAGISPSTI*YSISAL Trigger: CAATGCAGAAATGGAATACAAAATAGTGGATGGTGA...TATACCTGCAAAGGCACCTAACCTGCCTGATAAAGTAATGTCCTGTGTTGTCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CAA 90 bp | AATGGAGACATATTTACAACCTCCTTTTGTCCCAGAAGTGGAATTTCTGTTTACCGGATGGTAAGTGTGTaGGTACTGCTTAGTGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: NGDIFTTSFCPRSGISVYRMVSV*VLLSEG Trigger: TCCTTCACTAAGCAGTACCAACACACTTACCATCCG...GTAAACAGAAATTCCACTTCTGGGACAAAAGGAGGTTGTAAATATGTCTCCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CAA 90 bp | GAAGCCTTAACAATTAAAAATGGAGACATATTTACAACCTCCTTTTGTCCCAGATTTGGAAGGGCAGTCTaGATGACTCCTGTTTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: EALTIKNGDIFTTSFCPRFGRAV*MTPVLG Trigger: ACCCAAAACAGGAGTCATCAAGACTGCCCTTCCAAA...TCTGGGACAAAAGGAGGTTGTAAATATGTCTCCATTTTTAATTGTTAAGGCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CAA 90 bp | AAATTCTTCCAAGTTTTGATAGGCAAGAAGGTCTCAGATTTTTCGAATGGTGTACGGATGGTAAGTGTGTaGGTACTGCTTAGTGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: KFFQVLIGKKVSDFSNGVRMVSV*VLLSEG Trigger: TCCTTCACTAAGCAGTACCAACACACTTACCATCCG...TACACCATTCGAAAAATCTGAGACCTTCTTGCCTATCAAAACTTGGAAGAATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CAA 90 bp | AATGGAGACATATTTACAACCTCCTTTTGTCCCAGAAGTGGAATTTCTGTTTACTTGATGACTCCTGTTTaGGGTTCCACTGAGAAATAT | + |
|
Preference number: 5 (lower is better) Translates to: NGDIFTTSFCPRSGISVYLMTPV*GSTEKY Trigger: ATATTTCTCAGTGGAACCCAAAACAGGAGTCATCAA...GTAAACAGAAATTCCACTTCTGGGACAAAAGGAGGTTGTAAATATGTCTCCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CAA 90 bp | GCCTTAACAATTAAAAATGGAGACATATTTACAACCTCCTTTTGTCCCAGAAGTTTGTCAGCAGATATCTaGAAAATGCCCAGTCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: ALTIKNGDIFTTSFCPRSLSADI*KMPSPS Trigger: TGATGGACTGGGCATTTTCAAGATATCTGCTGACAA...ACTTCTGGGACAAAAGGAGGTTGTAAATATGTCTCCATTTTTAATTGTTAAGGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CAA 90 bp | AAATTCTTCCAAGTTTTGATAGGCAAGAAGGTCTCAGATTTTTCGAATGGTGTACTGTGTTTCTGTCAATaGAATATCTCACAGGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KFFQVLIGKKVSDFSNGVLCFCQ*NISQGC Trigger: ACAGCCCTGTGAGATATTCAATTGACAGAAACACAG...TACACCATTCGAAAAATCTGAGACCTTCTTGCCTATCAAAACTTGGAAGAATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS-3UTR CAA 90 bp | GCCTTAACAATTAAAAATGGAGACATATTTACAACCTCCTTTTGTCCCAGAAGTTTGATGACTCCTGTTTaGGGTTCCACTGAGAAATAT | + |
|
Preference number: 5 (lower is better) Translates to: ALTIKNGDIFTTSFCPRSLMTPV*GSTEKY Trigger: ATATTTCTCAGTGGAACCCAAAACAGGAGTCATCAA...ACTTCTGGGACAAAAGGAGGTTGTAAATATGTCTCCATTTTTAATTGTTAAGGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000172005.8 |
||
| CDS CCA 72 bp | CAAACCCAGCTGCGCTTGGTCCGGGACCTTCCTGACTaGAAGTATGGCTTGGATCTGGACCGTGGCAGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: QTQLRLVRDLPD*KYGLDLDRGSS Trigger: TGAGCTGCCACGGTCCAGATCCAAGCCATACTTCCAGTCAGGAAGGTCCCGGACCAAGCGCAGCTGGGTTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000129923.2 ENSMUST00000131464.8 ENSMUST00000137092.8 ENSMUST00000145188.2 ENSMUST00000146282.3 ENSMUST00000172005.8 |
||
| CDS TCA 72 bp | ATTCCAAACCCAGCTGCGCTTGGTCCGGGACCTTCCTaGCTGGAAGTATGGCTTGGATCTGGACCGTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: IPNPAALGPGPS*LEVWLGSGPWQ Trigger: CTGCCACGGTCCAGATCCAAGCCATACTTCCAGTCAGGAAGGTCCCGGACCAAGCGCAGCTGGGTTTGGAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000129923.2 ENSMUST00000131464.8 ENSMUST00000137092.8 ENSMUST00000145188.2 ENSMUST00000146282.3 ENSMUST00000172005.8 |
||
| CDS CCA 72 bp | TCCGGGACCTTCCTGACTGGAAGTATGGCTTGGATCTaGACCGTGGCAGCTCAGCTTGACTCATTCCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SGTFLTGSMAWI*TVAAQLDSFQR Trigger: TCTCTGGAATGAGTCAAGCTGAGCTGCCACGGTCCAGATCCAAGCCATACTTCCAGTCAGGAAGGTCCCGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000129923.2 ENSMUST00000131464.8 ENSMUST00000137092.8 ENSMUST00000145188.2 ENSMUST00000146282.3 ENSMUST00000172005.8 |
||
| CDS TCA 72 bp | AAGTATGGCTTGGATCTGGACCGTGGCAGCTCAGCTTaGCTCATTCCAGAGAAGCAAAGGAAGAGAGCTATA | + |
|
Preference number: 6 (lower is better) Translates to: KYGLDLDRGSSA*LIPEKQRKRAI Trigger: TATAGCTCTCTTCCTTTGCTTCTCTGGAATGAGTCAAGCTGAGCTGCCACGGTCCAGATCCAAGCCATACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000027542.13 ENSMUST00000112701.8 ENSMUST00000129923.2 ENSMUST00000131464.8 ENSMUST00000137092.8 ENSMUST00000145188.2 ENSMUST00000146282.3 ENSMUST00000172005.8 |
||
| CDS CCA 72 bp | CGTCTTCTCATAGTGACAATGAGGAGGATCAGCACTTaGTGTGACTCTAACAAAGCAAGTGAAAGATCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: RLLIVTMRRIST*CDSNKASERSV Trigger: AACAGATCTTTCACTTGCTTTGTTAGAGTCACACCAAGTGCTGATCCTCCTCATTGTCACTATGAGAAGACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134301.2 |
||