Pregenerated sensors for CCDC92 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037979Ensembl transcript IDs: ENSMUST00000036206.14, ENSMUST00000135495.8, ENSMUST00000143268.2
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCTCCCTTCCTGCTAAGCCACTGGTGTGGGGATCCACCTCCGGCTaGTCCGGCACATGGCTCCTTCCGGCAAGAGCACAGAGGCTCAAG | + |
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Preference number: 1 (lower is better) Translates to: PSLPAKPLVWGSTSG*SGTWLLPARAQRLK Trigger: CTTGAGCCTCTGTGCTCTTGCCGGAAGGAGCCATGTGCCGGAGCAGCCGGAGGTGGATCCCCACACCAGTGGCTTAGCAGGAAGGGAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| 3UTR CCA 90 bp | GGCAAGTGCATTCATTCTCCCTCCCTTCCTGCTAAGCCACTGGTGTaGGGATCCACCTCCGGCTGCTCCGGCACATGGCTCCTTCCGGCA | + |
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Preference number: 1 (lower is better) Translates to: GKCIHSPSLPAKPLV*GSTSGCSGTWLLPA Trigger: TGCCGGAAGGAGCCATGTGCCGGAGCAGCCGGAGGTGGATCCCCACACCAGTGGCTTAGCAGGAAGGGAGGGAGAATGAATGCACTTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| 3UTR CCA 90 bp | CTATGGAGCCAGGAGCCAGGTTTCGACAGGAGGAGACATTTGGCATaGGTAGGCGAGGAAGGTGTGGGCGAGGAGGTTCCCTGTGGCGCT | + |
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Preference number: 1 (lower is better) Translates to: LWSQEPGFDRRRHLA*VGEEGVGEEVPCGA Trigger: AGCGCCACAGGGAACCTCCTCGCCCACACCTTCCTCGCCTACCCATGCCAAATGTCTCCTCCTGTCGAAACCTGGCTCCTGGCTCCATAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| 3UTR CCA 90 bp | GAGCTCCAGACCTCTTCTCTGTGTGGCCTTGGGACAAATGGCCACTaGCTGCGTCTCTTACACTGTGAGACAGGGAGGCAGCGCCTGGGC | + |
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Preference number: 1 (lower is better) Translates to: ELQTSSLCGLGTNGH*LRLLHCETGRQRLG Trigger: GCCCAGGCGCTGCCTCCCTGTCTCACAGTGTAAGAGACGCAGCCAGTGGCCATTTGTCCCAAGGCCACACAGAGAAGAGGTCTGGAGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| 3UTR TCA 90 bp | GTGTGGCCTTGGGACAAATGGCCACTGGCTGCGTCTCTTACACTGTaGGACAGGGAGGCAGCGCCTGGGCAGGACAGAATGCAGCTTCTG | + |
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Preference number: 1 (lower is better) Translates to: VWPWDKWPLAASLTL*DREAAPGQDRMQLL Trigger: CAGAAGCTGCATTCTGTCCTGCCCAGGCGCTGCCTCCCTGTCTCACAGTGTAAGAGACGCAGCCAGTGGCCATTTGTCCCAAGGCCACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| 3UTR GCA 90 bp | TCCAGACCTCTTCTCTGTGTGGCCTTGGGACAAATGGCCACTGGCTaGGTCTCTTACACTGTGAGACAGGGAGGCAGCGCCTGGGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: SRPLLCVALGQMATG*VSYTVRQGGSAWAG Trigger: TCCTGCCCAGGCGCTGCCTCCCTGTCTCACAGTGTAAGAGACGCAGCCAGTGGCCATTTGTCCCAAGGCCACACAGAGAAGAGGTCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| 3UTR TCA 90 bp | CGAGGTGAGGTAGGCCACAGTGCTGGCGCGTTGCTCCAACTCACCTaGCAGCATGCTCAGTTTGTGGCTCTTCACCTTCAGCTCCTCCAG | + |
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Preference number: 1 (lower is better) Translates to: RGEVGHSAGALLQLT*QHAQFVALHLQLLQ Trigger: CTGGAGGAGCTGAAGGTGAAGAGCCACAAACTGAGCATGCTGTCAGGTGAGTTGGAGCAACGCGCCAGCACTGTGGCCTACCTCACCTCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135495.8 |
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| 3UTR GCA 90 bp | GCACAGCGATGGCGGCGTTCTTCTGTTCCAGTTCCTGCAGCAGCTTaGGGTTTTCCTCCTCTTTGGCCTTCAGCTGGGCTTCCAGCTCCT | + |
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Preference number: 1 (lower is better) Translates to: AQRWRRSSVPVPAAA*GFPPLWPSAGLPAP Trigger: AGGAGCTGGAAGCCCAGCTGAAGGCCAAAGAGGAGGAAAACCGCAAGCTGCTGCAGGAACTGGAACAGAAGAACGCCGCCATCGCTGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135495.8 |
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| 3UTR GCA 90 bp | GTGTTCTCCAGCACAGCGATGGCGGCGTTCTTCTGTTCCAGTTCCTaGAGCAGCTTGCGGTTTTCCTCCTCTTTGGCCTTCAGCTGGGCT | + |
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Preference number: 1 (lower is better) Translates to: VFSSTAMAAFFCSSS*SSLRFSSSLAFSWA Trigger: AGCCCAGCTGAAGGCCAAAGAGGAGGAAAACCGCAAGCTGCTGCAGGAACTGGAACAGAAGAACGCCGCCATCGCTGTGCTGGAGAACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135495.8 |
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| 3UTR CCA 90 bp | TTTAAGGCAAGTGCATTCATTCTCCCTCCCTTCCTGCTAAGCCACTaGTGTGGGGATCCACCTCCGGCTGCTCCGGCACATGGCTCCTTC | + |
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Preference number: 1 (lower is better) Translates to: FKASAFILPPFLLSH*CGDPPPAAPAHGSF Trigger: GAAGGAGCCATGTGCCGGAGCAGCCGGAGGTGGATCCCCACACCAGTGGCTTAGCAGGAAGGGAGGGAGAATGAATGCACTTGCCTTAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| 3UTR GCA 90 bp | TGTGAGACAGGGAGGCAGCGCCTGGGCAGGACAGAATGCAGCTTCTaGCAGAAACGCAGGAGCATTAACAATCTCAGCAACAGCTCTGGG | + |
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Preference number: 1 (lower is better) Translates to: CETGRQRLGRTECSF*QKRRSINNLSNSSG Trigger: CCCAGAGCTGTTGCTGAGATTGTTAATGCTCCTGCGTTTCTGGCAGAAGCTGCATTCTGTCCTGCCCAGGCGCTGCCTCCCTGTCTCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| 3UTR CCA 90 bp | GCTGGGGTTGGCCTCAGCTTCCCAAGCTTCTTGTATAGAGAACTCTaGATAGAGCACACGCCAGAGCGAGTTTTAAGGCAAGTGCATTCA | + |
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Preference number: 1 (lower is better) Translates to: AGVGLSFPSFLYREL*IEHTPERVLRQVHS Trigger: TGAATGCACTTGCCTTAAAACTCGCTCTGGCGTGTGCTCTATCCAGAGTTCTCTATACAAGAAGCTTGGGAAGCTGAGGCCAACCCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| 3UTR CCA 90 bp | GATAGCTCCTTCTCTGCTTTGACTTCAGGCGATTCATATTCTAGGTaGCATAGTGATTCAGCCATGGCTGTATCTAGGAGTGCGCCAAGA | + |
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Preference number: 1 (lower is better) Translates to: DSSFSALTSGDSYSR*HSDSAMAVSRSAPR Trigger: TCTTGGCGCACTCCTAGATACAGCCATGGCTGAATCACTATGCCACCTAGAATATGAATCGCCTGAAGTCAAAGCAGAGAAGGAGCTATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| 3UTR GCA 90 bp | AAGATTTTATTTCTGTGTATGTGTGAGAGCCTGCCTGAATATACGTaGACCACCTGTAAGGTGGTCCCTGGAGTTACAGCTAATTGTGAG | + |
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Preference number: 1 (lower is better) Translates to: KILFLCMCESLPEYT*TTCKVVPGVTANCE Trigger: CTCACAATTAGCTGTAACTCCAGGGACCACCTTACAGGTGGTGCACGTATATTCAGGCAGGCTCTCACACATACACAGAAATAAAATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| 3UTR-3UTR CCA 90 bp | CCACCCCACCTGCTTCGTCCTCCCCGACCACCTCCTCCACAGTCCCTCGGTGCTGCTGTCCTGGATCTGTaGAGGGATAGCTCCTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: PPHLLRPPRPPPPQSLGAAVLDL*RDSSFS Trigger: AGAGAAGGAGCTATCCCTCCACAGATCCAGGACAGC...AGCACCGAGGGACTGTGGAGGAGGTGGTCGGGGAGGACGAAGCAGGTGGGGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| 3UTR-3UTR CCA 90 bp | CACCCCACCTGCTTCGTCCTCCCCGACCACCTCCTCCACAGTCCCTCGGTGCTTAGCATTGTGTCACTATaGAGCCAGGAGCCAGGTTTC | + |
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Preference number: 2 (lower is better) Translates to: HPTCFVLPDHLLHSPSVLSIVSL*SQEPGF Trigger: GAAACCTGGCTCCTGGCTCCATAGTGACACAATGCT...AAGCACCGAGGGACTGTGGAGGAGGTGGTCGGGGAGGACGAAGCAGGTGGGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| 3UTR-3UTR CCA 90 bp | CACCCCACCTGCTTCGTCCTCCCCGACCACCTCCTCCACAGTCCCTCGGTGCTTTCTCATAGGCTGTCCTaGATCTGTGGAGGGATAGCT | + |
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Preference number: 2 (lower is better) Translates to: HPTCFVLPDHLLHSPSVLSHRLS*ICGGIA Trigger: AGCTATCCCTCCACAGATCCAGGACAGCCTATGAGA...AAGCACCGAGGGACTGTGGAGGAGGTGGTCGGGGAGGACGAAGCAGGTGGGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| 3UTR CAA 90 bp | AGCACAGCGATGGCGGCGTTCTTCTGTTCCAGTTCCTGCAGCAGCTaGCGGTTTTCCTCCTCTTTGGCCTTCAGCTGGGCTTCCAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: STAMAAFFCSSSCSS*RFSSSLAFSWASSS Trigger: GGAGCTGGAAGCCCAGCTGAAGGCCAAAGAGGAGGAAAACCGCAAGCTGCTGCAGGAACTGGAACAGAAGAACGCCGCCATCGCTGTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135495.8 |
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| 3UTR CAA 90 bp | GCGTTCAGTTCCTGCCCGAGCTCCAGACCTCTTCTCTGTGTGGCCTaGGGACAAATGGCCACTGGCTGCGTCTCTTACACTGTGAGACAG | + |
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Preference number: 2 (lower is better) Translates to: AFSSCPSSRPLLCVA*GQMATGCVSYTVRQ Trigger: CTGTCTCACAGTGTAAGAGACGCAGCCAGTGGCCATTTGTCCCAAGGCCACACAGAGAAGAGGTCTGGAGCTCGGGCAGGAACTGAACGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| 3UTR-3UTR GCA 90 bp | CAGGGCTGGCATCCGAGGTGCCACTTGAGCTCAGCAACTTCTTCTTGGCTGCATGTTCCTGCAGCAGCTTaGGGTTTTCCTCCTCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: QGWHPRCHLSSATSSWLHVPAAA*GFPPLW Trigger: CCAAAGAGGAGGAAAACCGCAAGCTGCTGCAGGAAC...ATGCAGCCAAGAAGAAGTTGCTGAGCTCAAGTGGCACCTCGGATGCCAGCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135495.8 |
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| 3UTR-3UTR CCA 90 bp | GGACAAATGGCCACTGGCTGCGTCTCTTACACTGTGAGACAGGGAGGCAGCGCCATAGTGATTCAGCCATaGCTGTATCTAGGAGTGCGC | + |
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Preference number: 2 (lower is better) Translates to: GQMATGCVSYTVRQGGSAIVIQP*LYLGVR Trigger: GCGCACTCCTAGATACAGCCATGGCTGAATCACTAT...GGCGCTGCCTCCCTGTCTCACAGTGTAAGAGACGCAGCCAGTGGCCATTTGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| 3UTR CAA 90 bp | GGCCACAGTGCCAGTAATATCTTCAGCGGGGACACCATTGTAGCATaGTGTCACTATGGAGCCAGGAGCCAGGTTTCGACAGGAGGAGAC | + |
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Preference number: 2 (lower is better) Translates to: GHSASNIFSGDTIVA*CHYGARSQVSTGGD Trigger: GTCTCCTCCTGTCGAAACCTGGCTCCTGGCTCCATAGTGACACAATGCTACAATGGTGTCCCCGCTGAAGATATTACTGGCACTGTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| 3UTR-3UTR GCA 90 bp | CATCCGAGGTGCCACTTGAGCTCAGCAACTTCTTCTTGGCTGCATGCAGCTGCGACTCACCTGACAGCATaGTCAGTTTGTGGCTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: HPRCHLSSATSSWLHAAATHLTA*SVCGSS Trigger: TGAAGAGCCACAAACTGAGCATGCTGTCAGGTGAGT...CGCAGCTGCATGCAGCCAAGAAGAAGTTGCTGAGCTCAAGTGGCACCTCGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135495.8 |
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| 3UTR-3UTR CCA 90 bp | CACCCCACCTGCTTCGTCCTCCCCGACCACCTCCTCCACAGTCCCTCGGTGCTTGAAAATAACATTTGTTaGATCCTGAACATCTGGATG | + |
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Preference number: 2 (lower is better) Translates to: HPTCFVLPDHLLHSPSVLENNIC*ILNIWM Trigger: CATCCAGATGTTCAGGATCCAACAAATGTTATTTTC...AAGCACCGAGGGACTGTGGAGGAGGTGGTCGGGGAGGACGAAGCAGGTGGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| 3UTR-3UTR TCA 90 bp | CTCTTCTCTGTGTGGCCTTGGGACAAATGGCCACTGGCTGCGTCTCTTACACTGGCTCCTTCTCTGCTTTaGCTTCAGGCGATTCATATT | + |
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Preference number: 2 (lower is better) Translates to: LFSVWPWDKWPLAASLTLAPSLL*LQAIHI Trigger: AATATGAATCGCCTGAAGTCAAAGCAGAGAAGGAGC...CAGTGTAAGAGACGCAGCCAGTGGCCATTTGTCCCAAGGCCACACAGAGAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| 3UTR-3UTR CCA 90 bp | ACAATCTCAGCAACAGCTCTGGGCAGCAAGTCCTCCCACCCCACCTGCTTCGTCGATTCATATTCTAGGTaGCATAGTGATTCAGCCATG | + |
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Preference number: 2 (lower is better) Translates to: TISATALGSKSSHPTCFVDSYSR*HSDSAM Trigger: CATGGCTGAATCACTATGCCACCTAGAATATGAATC...GACGAAGCAGGTGGGGTGGGAGGACTTGCTGCCCAGAGCTGTTGCTGAGATTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| 3UTR GCA 72 bp | GCAACAGCTCTGGGCAGCAAGTCCTCCCACCCCACCTaGTTCGTCCTCCCCGACCACCTCCTCCACAGTCCC | + |
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Preference number: 3 (lower is better) Translates to: ATALGSKSSHPT*FVLPDHLLHSP Trigger: GGGACTGTGGAGGAGGTGGTCGGGGAGGACGAAGCAGGTGGGGTGGGAGGACTTGCTGCCCAGAGCTGTTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| 3UTR CCA 72 bp | ATTCATTCTCCCTCCCTTCCTGCTAAGCCACTGGTGTaGGGATCCACCTCCGGCTGCTCCGGCACATGGCTC | + |
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Preference number: 3 (lower is better) Translates to: IHSPSLPAKPLV*GSTSGCSGTWL Trigger: GAGCCATGTGCCGGAGCAGCCGGAGGTGGATCCCCACACCAGTGGCTTAGCAGGAAGGGAGGGAGAATGAAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| 3UTR TCA 72 bp | TGGGACAAATGGCCACTGGCTGCGTCTCTTACACTGTaGGACAGGGAGGCAGCGCCTGGGCAGGACAGAATG | + |
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Preference number: 3 (lower is better) Translates to: WDKWPLAASLTL*DREAAPGQDRM Trigger: CATTCTGTCCTGCCCAGGCGCTGCCTCCCTGTCTCACAGTGTAAGAGACGCAGCCAGTGGCCATTTGTCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| 3UTR GCA 72 bp | CTTCTCTGTGTGGCCTTGGGACAAATGGCCACTGGCTaGGTCTCTTACACTGTGAGACAGGGAGGCAGCGCC | + |
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Preference number: 3 (lower is better) Translates to: LLCVALGQMATG*VSYTVRQGGSA Trigger: GGCGCTGCCTCCCTGTCTCACAGTGTAAGAGACGCAGCCAGTGGCCATTTGTCCCAAGGCCACACAGAGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| 3UTR CCA 72 bp | AGTGCATTCATTCTCCCTCCCTTCCTGCTAAGCCACTaGTGTGGGGATCCACCTCCGGCTGCTCCGGCACAT | + |
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Preference number: 3 (lower is better) Translates to: SAFILPPFLLSH*CGDPPPAAPAH Trigger: ATGTGCCGGAGCAGCCGGAGGTGGATCCCCACACCAGTGGCTTAGCAGGAAGGGAGGGAGAATGAATGCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| 3UTR CCA 72 bp | TGCGTCTCTTACACTGTGAGACAGGGAGGCAGCGCCTaGGCAGGACAGAATGCAGCTTCTGCCAGAAACGCA | + |
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Preference number: 3 (lower is better) Translates to: CVSYTVRQGGSA*AGQNAASARNA Trigger: TGCGTTTCTGGCAGAAGCTGCATTCTGTCCTGCCCAGGCGCTGCCTCCCTGTCTCACAGTGTAAGAGACGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| 3UTR TCA 72 bp | GTAGGCCACAGTGCTGGCGCGTTGCTCCAACTCACCTaGCAGCATGCTCAGTTTGTGGCTCTTCACCTTCAG | + |
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Preference number: 3 (lower is better) Translates to: VGHSAGALLQLT*QHAQFVALHLQ Trigger: CTGAAGGTGAAGAGCCACAAACTGAGCATGCTGTCAGGTGAGTTGGAGCAACGCGCCAGCACTGTGGCCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135495.8 |
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| 3UTR GCA 72 bp | GGGAGGCAGCGCCTGGGCAGGACAGAATGCAGCTTCTaGCAGAAACGCAGGAGCATTAACAATCTCAGCAAC | + |
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Preference number: 3 (lower is better) Translates to: GRQRLGRTECSF*QKRRSINNLSN Trigger: GTTGCTGAGATTGTTAATGCTCCTGCGTTTCTGGCAGAAGCTGCATTCTGTCCTGCCCAGGCGCTGCCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| 3UTR CCA 72 bp | ACCTCTTCTCTGTGTGGCCTTGGGACAAATGGCCACTaGCTGCGTCTCTTACACTGTGAGACAGGGAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: TSSLCGLGTNGH*LRLLHCETGRQ Trigger: CTGCCTCCCTGTCTCACAGTGTAAGAGACGCAGCCAGTGGCCATTTGTCCCAAGGCCACACAGAGAAGAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| 3UTR GCA 72 bp | TGTGAGACAGGGAGGCAGCGCCTGGGCAGGACAGAATaGAGCTTCTGCCAGAAACGCAGGAGCATTAACAAT | + |
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Preference number: 3 (lower is better) Translates to: CETGRQRLGRTE*SFCQKRRSINN Trigger: ATTGTTAATGCTCCTGCGTTTCTGGCAGAAGCTGCATTCTGTCCTGCCCAGGCGCTGCCTCCCTGTCTCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| 3UTR CCA 72 bp | CCAGCTCCTCACAGCGCCTCTTCAGCTCCGTCGTTCTaGAAGAGCTGTCTCTGTGTAAAAGATTCTCCAGAA | + |
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Preference number: 3 (lower is better) Translates to: PAPHSASSAPSF*KSCLCVKDSPE Trigger: TTCTGGAGAATCTTTTACACAGAGACAGCTCTTCCAGAACGACGGAGCTGAAGAGGCGCTGTGAGGAGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135495.8 |
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| 3UTR GCA 72 bp | TTTCTGTGTATGTGTGAGAGCCTGCCTGAATATACGTaGACCACCTGTAAGGTGGTCCCTGGAGTTACAGCT | + |
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Preference number: 3 (lower is better) Translates to: FLCMCESLPEYT*TTCKVVPGVTA Trigger: AGCTGTAACTCCAGGGACCACCTTACAGGTGGTGCACGTATATTCAGGCAGGCTCTCACACATACACAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| 3UTR CCA 72 bp | GCGATTCATATTCTAGGTGGCATAGTGATTCAGCCATaGCTGTATCTAGGAGTGCGCCAAGATCTCATGGCG | + |
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Preference number: 3 (lower is better) Translates to: AIHILGGIVIQP*LYLGVRQDLMA Trigger: CGCCATGAGATCTTGGCGCACTCCTAGATACAGCCATGGCTGAATCACTATGCCACCTAGAATATGAATCGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| 3UTR CCA 72 bp | GGCCTCAGCTTCCCAAGCTTCTTGTATAGAGAACTCTaGATAGAGCACACGCCAGAGCGAGTTTTAAGGCAA | + |
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Preference number: 3 (lower is better) Translates to: GLSFPSFLYREL*IEHTPERVLRQ Trigger: TTGCCTTAAAACTCGCTCTGGCGTGTGCTCTATCCAGAGTTCTCTATACAAGAAGCTTGGGAAGCTGAGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| 3UTR-3UTR CAA 90 bp | CTGTGTATGTGTGAGAGCCTGCCTGAATATACGTGCACCACCTGTAAGGTGGTCAGCTCCTTCTCTGCTTaGACTTCAGGCGATTCATAT | + |
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Preference number: 3 (lower is better) Translates to: LCMCESLPEYTCTTCKVVSSFSA*TSGDSY Trigger: ATATGAATCGCCTGAAGTCAAAGCAGAGAAGGAGCT...GACCACCTTACAGGTGGTGCACGTATATTCAGGCAGGCTCTCACACATACACAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR TCA 90 bp | AGCAACAGCTCTGGGCAGCAAGTCCTCCCACCCCACCTGCTTCGTCCTCCCCGACGGCGTGCAGCCCCTTaGGTGTGCTGGCGTGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: SNSSGQQVLPPHLLRPPRRRAAP*VCWRAP Trigger: GGGAGCACGCCAGCACACTCAAGGGGCTGCACGCCG...TCGGGGAGGACGAAGCAGGTGGGGTGGGAGGACTTGCTGCCCAGAGCTGTTGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR TCA 90 bp | CCACCCCACCTGCTTCGTCCTCCCCGACCACCTCCTCCACAGTCCCTCGGTGCTCTCAGGCTGGGCCTGTaGTGGAGTGGCATGATGAAT | + |
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Preference number: 4 (lower is better) Translates to: PPHLLRPPRPPPPQSLGALRLGL*WSGMMN Trigger: ATTCATCATGCCACTCCATCACAGGCCCAGCCTGAG...AGCACCGAGGGACTGTGGAGGAGGTGGTCGGGGAGGACGAAGCAGGTGGGGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR GCA 90 bp | CGAGGAAGGTGTGGGCGAGGAGGTTCCCTGTGGCGCTCACAGTGCGTGGATGACCCGCACCACCTTGCTTaGATTCACCTGGTCCACGGC | + |
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Preference number: 4 (lower is better) Translates to: RGRCGRGGSLWRSQCVDDPHHLA*IHLVHG Trigger: GCCGTGGACCAGGTGAATGCAAGCAAGGTGGTGCGG...GTCATCCACGCACTGTGAGCGCCACAGGGAACCTCCTCGCCCACACCTTCCTCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR CCA 90 bp | CCCCACCTGCTTCGTCCTCCCCGACCACCTCCTCCACAGTCCCTCGGTGCTTCACAGGCAGCTTGTCCTTaGGGGGTGTGGGTTTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: PHLLRPPRPPPPQSLGASQAACP*GVWVCS Trigger: GCTACAAACCCACACCCCCCAAGGACAAGCTGCCTG...TGAAGCACCGAGGGACTGTGGAGGAGGTGGTCGGGGAGGACGAAGCAGGTGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR CCA 90 bp | GGACAAATGGCCACTGGCTGCGTCTCTTACACTGTGAGACAGGGAGGCAGCGCCGGGTGGGGTCGGGCATaGCATCCACAGGCTCCCGAA | + |
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Preference number: 4 (lower is better) Translates to: GQMATGCVSYTVRQGGSAGWGRA*HPQAPE Trigger: TTCGGGAGCCTGTGGATGCCATGCCCGACCCCACCC...GGCGCTGCCTCCCTGTCTCACAGTGTAAGAGACGCAGCCAGTGGCCATTTGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR TCA 90 bp | CGGCGTTCTTCTGTTCCAGTTCCTGCAGCAGCTTGCGGTTTTCCTCCTCTTTGGCGGCGTGCAGCCCCTTaGGTGTGCTGGCGTGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: RRSSVPVPAAACGFPPLWRRAAP*VCWRAP Trigger: GGGAGCACGCCAGCACACTCAAGGGGCTGCACGCCG...CCAAAGAGGAGGAAAACCGCAAGCTGCTGCAGGAACTGGAACAGAAGAACGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135495.8 |
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| CDS-3UTR GCA 90 bp | ACAATCTCAGCAACAGCTCTGGGCAGCAAGTCCTCCCACCCCACCTGCTTCGTCTCTGTGCAGTGCTGCTaGAGCCGCCGGATCTCGGCG | + |
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Preference number: 4 (lower is better) Translates to: TISATALGSKSSHPTCFVSVQCC*SRRISA Trigger: CGCCGAGATCCGGCGGCTGCAGCAGCACTGCACAGA...GACGAAGCAGGTGGGGTGGGAGGACTTGCTGCCCAGAGCTGTTGCTGAGATTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR GCA 90 bp | CCACCCCACCTGCTTCGTCCTCCCCGACCACCTCCTCCACAGTCCCTCGGTGCTCAACTTCTTCTTGGCTaGATGCAGCTGCGAGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PPHLLRPPRPPPPQSLGAQLLLG*MQLRGE Trigger: CTCACCTCGCAGCTGCATGCAGCCAAGAAGAAGTTG...AGCACCGAGGGACTGTGGAGGAGGTGGTCGGGGAGGACGAAGCAGGTGGGGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR TCA 90 bp | AGCTCCAGACCTCTTCTCTGTGTGGCCTTGGGACAAATGGCCACTGGCTGCGTCCGAGAGGCCGCTCCTTaGGCTGGACCTCAGCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: SSRPLLCVALGQMATGCVREAAP*AGPQQT Trigger: AGTCTGCTGAGGTCCAGCTCAAGGAGCGGCCTCTCG...GACGCAGCCAGTGGCCATTTGTCCCAAGGCCACACAGAGAAGAGGTCTGGAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR GCA 90 bp | CTTGCTAAGATCAGGAGCCACAGCTGCTTGGTAAAGGGACTGTGCAGGGCAGGGTCTCGGGCTGGGCTGTaGTGCCCAGTGGCGCTACGA | + |
|
Preference number: 4 (lower is better) Translates to: LAKIRSHSCLVKGLCRAGSRAGL*CPVALR Trigger: TCGTAGCGCCACTGGGCAGCACAGCCCAGCCCGAGA...CCCTGCCCTGCACAGTCCCTTTACCAAGCAGCTGTGGCTCCTGATCTTAGCAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR CCA 90 bp | CCCCACCTGCTTCGTCCTCCCCGACCACCTCCTCCACAGTCCCTCGGTGCTTCATCAGCTCCGTCGTTCTaGAAGAGCTGTCTCCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PHLLRPPRPPPPQSLGASSAPSF*KSCLLS Trigger: TGACAGGAGACAGCTCTTCCAGAACGACGGAGCTGA...TGAAGCACCGAGGGACTGTGGAGGAGGTGGTCGGGGAGGACGAAGCAGGTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR CCA 90 bp | CCCCACCTGCTTCGTCCTCCCCGACCACCTCCTCCACAGTCCCTCGGTGCTTCAGGTTTTCCTCCTCTTTaGCCTTCAGCTGGGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PHLLRPPRPPPPQSLGASGFPPL*PSAGLP Trigger: TGGAAGCCCAGCTGAAGGCCAAAGAGGAGGAAAACC...TGAAGCACCGAGGGACTGTGGAGGAGGTGGTCGGGGAGGACGAAGCAGGTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR CCA 90 bp | GCGTTCAGTTCCTGCCCGAGCTCCAGACCTCTTCTCTGTGTGGCCTTGGGACAACCAGCAGGAATGGGGTaGGGTCGGGCATGGCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: AFSSCPSSRPLLCVALGQPAGMG*GRAWHP Trigger: TGGATGCCATGCCCGACCCCACCCCATTCCTGCTGG...TTGTCCCAAGGCCACACAGAGAAGAGGTCTGGAGCTCGGGCAGGAACTGAACGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR GCA 90 bp | TCTCTCTCTCACGGACTGTGTTCTCCAGCACAGCGATGGCGGCGTTCTTCTGTTCGCCGGATCTCGGCGTaGAGCCCCTTGAGTGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLSHGLCSPAQRWRRSSVRRISA*SPLSVL Trigger: CAGCACACTCAAGGGGCTGCACGCCGAGATCCGGCG...AACAGAAGAACGCCGCCATCGCTGTGCTGGAGAACACAGTCCGTGAGAGAGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135495.8 |
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| CDS-3UTR GCA 90 bp | TTGGGACAAATGGCCACTGGCTGCGTCTCTTACACTGTGAGACAGGGAGGCAGCTCCTCAAACTCGGGGTaGAGTGGGGCGGACAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGQMATGCVSYTVRQGGSSSNSG*SGADRL Trigger: GAGCCTGTCCGCCCCACTGCACCCCGAGTTTGAGGA...GCTGCCTCCCTGTCTCACAGTGTAAGAGACGCAGCCAGTGGCCATTTGTCCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR CCA 90 bp | ACAATCTCAGCAACAGCTCTGGGCAGCAAGTCCTCCCACCCCACCTGCTTCGTCCTGGCGTGCTCCCGCTaGAGGAAGAGCAGGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TISATALGSKSSHPTCFVLACSR*RKSRFF Trigger: GAAGAACCTGCTCTTCCTCCAGCGGGAGCACGCCAG...GACGAAGCAGGTGGGGTGGGAGGACTTGCTGCCCAGAGCTGTTGCTGAGATTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR CCA 90 bp | AGCAACAGCTCTGGGCAGCAAGTCCTCCCACCCCACCTGCTTCGTCCTCCCCGATCAGCAACTTCTTCTTaGCTGCATGCAGCTGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SNSSGQQVLPPHLLRPPRSATSS*LHAAAR Trigger: CCTCGCAGCTGCATGCAGCCAAGAAGAAGTTGCTGA...TCGGGGAGGACGAAGCAGGTGGGGTGGGAGGACTTGCTGCCCAGAGCTGTTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR CCA 90 bp | CGAGGAAGGTGTGGGCGAGGAGGTTCCCTGTGGCGCTCACAGTGCGTGGATGACTTGCTTGCATTCACCTaGTCCACGGCCCTCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RGRCGRGGSLWRSQCVDDLLAFT*STALIS Trigger: AGAGATGAGGGCCGTGGACCAGGTGAATGCAAGCAA...GTCATCCACGCACTGTGAGCGCCACAGGGAACCTCCTCGCCCACACCTTCCTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR TCA 90 bp | CGAGGAAGGTGTGGGCGAGGAGGTTCCCTGTGGCGCTCACAGTGCGTGGATGACATCCGAGGTGCCACTTaGGCTCAGCAACTTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RGRCGRGGSLWRSQCVDDIRGAT*AQQLLL Trigger: AAGAAGAAGTTGCTGAGCTCAAGTGGCACCTCGGAT...GTCATCCACGCACTGTGAGCGCCACAGGGAACCTCCTCGCCCACACCTTCCTCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR TCA 90 bp | AGCTCCAGACCTCTTCTCTGTGTGGCCTTGGGACAAATGGCCACTGGCTGCGTCAGTGGCGCTACGATCTaGGGCAATGGGAGGGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSRPLLCVALGQMATGCVSGATI*GNGRDD Trigger: GTCATCCCTCCCATTGCCTCAGATCGTAGCGCCACT...GACGCAGCCAGTGGCCATTTGTCCCAAGGCCACACAGAGAAGAGGTCTGGAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR CCA 90 bp | TCACGGACTGTGTTCTCCAGCACAGCGATGGCGGCGTTCTTCTGTTCCAGTTCCCTGGCGTGCTCCCGCTaGAGGAAGAGCAGGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SRTVFSSTAMAAFFCSSSLACSR*RKSRFF Trigger: GAAGAACCTGCTCTTCCTCCAGCGGGAGCACGCCAG...GGAACTGGAACAGAAGAACGCCGCCATCGCTGTGCTGGAGAACACAGTCCGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135495.8 |
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| CDS-3UTR CCA 90 bp | GAGCACAGAGGCTCAAGCGTTCAGTTCCTGCCCGAGCTCCAGACCTCTTCTCTGATCTCTCCCTCAGGCTaGGCCTGTGATGGAGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EHRGSSVQFLPELQTSSLISPSG*ACDGVA Trigger: TGCCACTCCATCACAGGCCCAGCCTGAGGGAGAGAT...CAGAGAAGAGGTCTGGAGCTCGGGCAGGAACTGAACGCTTGAGCCTCTGTGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR GCA 90 bp | ATTGTAGCATTGTGTCACTATGGAGCCAGGAGCCAGGTTTCGACAGGAGGAGACCGCCGGATCTCGGCGTaGAGCCCCTTGAGTGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IVALCHYGARSQVSTGGDRRISA*SPLSVL Trigger: CAGCACACTCAAGGGGCTGCACGCCGAGATCCGGCG...GTCTCCTCCTGTCGAAACCTGGCTCCTGGCTCCATAGTGACACAATGCTACAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR GCA 90 bp | CAGCTTGCGGTTTTCCTCCTCTTTGGCCTTCAGCTGGGCTTCCAGCTCCTCACAGTTAGATCTGTGCAGTaGTGCTGCAGCCGCCGGATC | + |
|
Preference number: 4 (lower is better) Translates to: QLAVFLLFGLQLGFQLLTVRSVQ*CCSRRI Trigger: GATCCGGCGGCTGCAGCAGCACTGCACAGATCTAAC...TGTGAGGAGCTGGAAGCCCAGCTGAAGGCCAAAGAGGAGGAAAACCGCAAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135495.8 |
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| CDS-3UTR GCA 90 bp | CCAGACCTCTTCTCTGTGTGGCCTTGGGACAAATGGCCACTGGCTGCGTCTCTTCGGTCTGTCCCTGAGTaGTTCCGCACCACCTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PDLFSVWPWDKWPLAASLRSVPE*FRTTLL Trigger: AAGCAAGGTGGTGCGGAAGCACTCAGGGACAGACCG...AAGAGACGCAGCCAGTGGCCATTTGTCCCAAGGCCACACAGAGAAGAGGTCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR CCA 90 bp | ACAATCTCAGCAACAGCTCTGGGCAGCAAGTCCTCCCACCCCACCTGCTTCGTCGGGCCTGTGATGGAGTaGCATGATGAATGCGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TISATALGSKSSHPTCFVGPVME*HDECGE Trigger: CTCACCGCATTCATCATGCCACTCCATCACAGGCCC...GACGAAGCAGGTGGGGTGGGAGGACTTGCTGCCCAGAGCTGTTGCTGAGATTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| 3UTR CAA 72 bp | TCCTGCCCGAGCTCCAGACCTCTTCTCTGTGTGGCCTaGGGACAAATGGCCACTGGCTGCGTCTCTTACACT | + |
|
Preference number: 4 (lower is better) Translates to: SCPSSRPLLCVA*GQMATGCVSYT Trigger: AGTGTAAGAGACGCAGCCAGTGGCCATTTGTCCCAAGGCCACACAGAGAAGAGGTCTGGAGCTCGGGCAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR GCA 90 bp | GGCAACATCAGGGTTGAGGTCATCTTGCTAAGATCAGGAGCCACAGCTGCTTGGACAGGCTCTTCTTCATaGGGCGGCGGGGTGTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GNIRVEVILLRSGATAAWTGSSS*GGGVSQ Trigger: CTGAGACACCCCGCCGCCGCATGAAGAAGAGCCTGT...CCAAGCAGCTGTGGCTCCTGATCTTAGCAAGATGACCTCAACCCTGATGTTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR GCA 90 bp | TTGGGACAAATGGCCACTGGCTGCGTCTCTTACACTGTGAGACAGGGAGGCAGCGCTTCCGCACCACCTTaGTTGCATTCACCTGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGQMATGCVSYTVRQGGSASAPP*LHSPGP Trigger: TGGACCAGGTGAATGCAAGCAAGGTGGTGCGGAAGC...GCTGCCTCCCTGTCTCACAGTGTAAGAGACGCAGCCAGTGGCCATTTGTCCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR CCA 90 bp | GAGCACAGAGGCTCAAGCGTTCAGTTCCTGCCCGAGCTCCAGACCTCTTCTCTGTGTGCACTGTGCAGCTaGTTCTCCAGGTTTGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EHRGSSVQFLPELQTSSLCALCS*FSRFVA Trigger: AGCCACAAACCTGGAGAACCAGCTGCACAGTGCACA...CAGAGAAGAGGTCTGGAGCTCGGGCAGGAACTGAACGCTTGAGCCTCTGTGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR CCA 90 bp | ATTGTAGCATTGTGTCACTATGGAGCCAGGAGCCAGGTTTCGACAGGAGGAGACTGGCTTATCTCGGGCTaGGCTGTGCTGCCCAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: IVALCHYGARSQVSTGGDWLISG*AVLPSG Trigger: GCCACTGGGCAGCACAGCCCAGCCCGAGATAAGCCA...GTCTCCTCCTGTCGAAACCTGGCTCCTGGCTCCATAGTGACACAATGCTACAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR TCA 90 bp | CCACCCCACCTGCTTCGTCCTCCCCGACCACCTCCTCCACAGTCCCTCGGTGCTTCAGTTCGAAACTTTTaGGTGTCAGCTCATATGTTA | + |
|
Preference number: 4 (lower is better) Translates to: PPHLLRPPRPPPPQSLGASVRNF*VSAHML Trigger: TAACATATGAGCTGACACTCAAAAGTTTCGAACTGA...AGCACCGAGGGACTGTGGAGGAGGTGGTCGGGGAGGACGAAGCAGGTGGGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR GCA 90 bp | TTGGGACAAATGGCCACTGGCTGCGTCTCTTACACTGTGAGACAGGGAGGCAGCGTTCCTGCAGCAGCTTaGGGTTTTCCTCCTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGQMATGCVSYTVRQGGSVPAAA*GFPPLW Trigger: CCAAAGAGGAGGAAAACCGCAAGCTGCTGCAGGAAC...GCTGCCTCCCTGTCTCACAGTGTAAGAGACGCAGCCAGTGGCCATTTGTCCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR GCA 90 bp | ACAATCTCAGCAACAGCTCTGGGCAGCAAGTCCTCCCACCCCACCTGCTTCGTCTTCTGTTCCAGTTCCTaGAGCAGCTTGCGGTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TISATALGSKSSHPTCFVFCSSS*SSLRFS Trigger: GGAAAACCGCAAGCTGCTGCAGGAACTGGAACAGAA...GACGAAGCAGGTGGGGTGGGAGGACTTGCTGCCCAGAGCTGTTGCTGAGATTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR CCA 90 bp | TGTTCTCCAGCACAGCGATGGCGGCGTTCTTCTGTTCCAGTTCCTGCAGCAGCTTGTGCACTGTGCAGCTaGTTCTCCAGGTTTGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CSPAQRWRRSSVPVPAAACALCS*FSRFVA Trigger: AGCCACAAACCTGGAGAACCAGCTGCACAGTGCACA...AGCTGCTGCAGGAACTGGAACAGAAGAACGCCGCCATCGCTGTGCTGGAGAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135495.8 |
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| CDS-3UTR CCA 90 bp | CCAGACCTCTTCTCTGTGTGGCCTTGGGACAAATGGCCACTGGCTGCGTCTCTTAACATGCGTCTTGTGTaGCTTATCTCGGGCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PDLFSVWPWDKWPLAASLNMRLV*LISGWA Trigger: AGCCCAGCCCGAGATAAGCCACACAAGACGCATGTT...AAGAGACGCAGCCAGTGGCCATTTGTCCCAAGGCCACACAGAGAAGAGGTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| 3UTR CAA 72 bp | GTGGGTGCTGGGGTTGGCCTCAGCTTCCCAAGCTTCTaGTATAGAGAACTCTGGATAGAGCACACGCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VGAGVGLSFPSF*YRELWIEHTPE Trigger: CTCTGGCGTGTGCTCTATCCAGAGTTCTCTATACAAGAAGCTTGGGAAGCTGAGGCCAACCCCAGCACCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR GCA 90 bp | ATTGTAGCATTGTGTCACTATGGAGCCAGGAGCCAGGTTTCGACAGGAGGAGACGTTAGATCTGTGCAGTaGTGCTGCAGCCGCCGGATC | + |
|
Preference number: 4 (lower is better) Translates to: IVALCHYGARSQVSTGGDVRSVQ*CCSRRI Trigger: GATCCGGCGGCTGCAGCAGCACTGCACAGATCTAAC...GTCTCCTCCTGTCGAAACCTGGCTCCTGGCTCCATAGTGACACAATGCTACAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR TCA 90 bp | CTCTTCTCTGTGTGGCCTTGGGACAAATGGCCACTGGCTGCGTCTCTTACACTGTTGCTCCAACTCACCTaGCAGCATGCTCAGTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LFSVWPWDKWPLAASLTLLLQLT*QHAQFV Trigger: CACAAACTGAGCATGCTGTCAGGTGAGTTGGAGCAA...CAGTGTAAGAGACGCAGCCAGTGGCCATTTGTCCCAAGGCCACACAGAGAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR GCA 90 bp | TTGGGACAAATGGCCACTGGCTGCGTCTCTTACACTGTGAGACAGGGAGGCAGCTTCTTCTGTGCACTGTaGAGCTGGTTCTCCAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LGQMATGCVSYTVRQGGSFFCAL*SWFSRF Trigger: AAACCTGGAGAACCAGCTGCACAGTGCACAGAAGAA...GCTGCCTCCCTGTCTCACAGTGTAAGAGACGCAGCCAGTGGCCATTTGTCCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR GCA 90 bp | CAGCTTGCGGTTTTCCTCCTCTTTGGCCTTCAGCTGGGCTTCCAGCTCCTCACATTCTTCTGTGCACTGTaGAGCTGGTTCTCCAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QLAVFLLFGLQLGFQLLTFFCAL*SWFSRF Trigger: AAACCTGGAGAACCAGCTGCACAGTGCACAGAAGAA...TGTGAGGAGCTGGAAGCCCAGCTGAAGGCCAAAGAGGAGGAAAACCGCAAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135495.8 |
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| CDS-3UTR GCA 90 bp | GGCAACATCAGGGTTGAGGTCATCTTGCTAAGATCAGGAGCCACAGCTGCTTGGCATATGTTAGATCTGTaGAGTGCTGCTGCAGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: GNIRVEVILLRSGATAAWHMLDL*SAAAAA Trigger: GGCGGCTGCAGCAGCACTGCACAGATCTAACATATG...CCAAGCAGCTGTGGCTCCTGATCTTAGCAAGATGACCTCAACCCTGATGTTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| 3UTR CAA 72 bp | GCCAGTAATATCTTCAGCGGGGACACCATTGTAGCATaGTGTCACTATGGAGCCAGGAGCCAGGTTTCGACA | + |
|
Preference number: 4 (lower is better) Translates to: ASNIFSGDTIVA*CHYGARSQVST Trigger: TGTCGAAACCTGGCTCCTGGCTCCATAGTGACACAATGCTACAATGGTGTCCCCGCTGAAGATATTACTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR GCA 90 bp | CTGTGTATGTGTGAGAGCCTGCCTGAATATACGTGCACCACCTGTAAGGTGGTCACTCACCTGACAGCATaGTCAGTTTGTGGCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LCMCESLPEYTCTTCKVVTHLTA*SVCGSS Trigger: TGAAGAGCCACAAACTGAGCATGCTGTCAGGTGAGT...GACCACCTTACAGGTGGTGCACGTATATTCAGGCAGGCTCTCACACATACACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR TCA 90 bp | TGTTCTCCAGCACAGCGATGGCGGCGTTCTTCTGTTCCAGTTCCTGCAGCAGCTTCAGTTCGAAACTTTTaGGTGTCAGCTCATATGTTA | + |
|
Preference number: 4 (lower is better) Translates to: CSPAQRWRRSSVPVPAAASVRNF*VSAHML Trigger: TAACATATGAGCTGACACTCAAAAGTTTCGAACTGA...AGCTGCTGCAGGAACTGGAACAGAAGAACGCCGCCATCGCTGTGCTGGAGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135495.8 |
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| CDS-3UTR GCA 90 bp | TCTTCAGCTCCGTCGTTCTGGAAGAGCTGTCTCTGTGTAAAAGATTCTCCAGAACATATGTTAGATCTGTaGAGTGCTGCTGCAGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSAPSFWKSCLCVKDSPEHMLDL*SAAAAA Trigger: GGCGGCTGCAGCAGCACTGCACAGATCTAACATATG...TTCTGGAGAATCTTTTACACAGAGACAGCTCTTCCAGAACGACGGAGCTGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135495.8 |
||
| CDS CCA 90 bp | GGCTCTTCTTCATGCGGCGGCGGGGTGTCTCAGGCAGCTTGTCCTTaGGGGGTGTGGGTTTGTAGCTGGCCAGCGCGGGACTGCCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GSSSCGGGVSQAACP*GVWVCSWPARDCRQ Trigger: CTGCCGGCAGTCCCGCGCTGGCCAGCTACAAACCCACACCCCCCAAGGACAAGCTGCCTGAGACACCCCGCCGCCGCATGAAGAAGAGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS CCA 90 bp | CCGCTCCTTGAGCTGGACCTCAGCAGACTCCCGGGCCAGCAGGAATaGGGTGGGGTCGGGCATGGCATCCACAGGCTCCCGAAGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PLLELDLSRLPGQQE*GGVGHGIHRLPKEE Trigger: CTCCTCCTTCGGGAGCCTGTGGATGCCATGCCCGACCCCACCCCATTCCTGCTGGCCCGGGAGTCTGCTGAGGTCCAGCTCAAGGAGCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS CCA 90 bp | GCTCTCGGCTCCAAACCTGTAGACCTCCTCAAACTCGGGGTGCAGTaGGGCGGACAGGCTCTTCTTCATGCGGCGGCGGGGTGTCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ALGSKPVDLLKLGVQ*GGQALLHAAAGCLR Trigger: CCTGAGACACCCCGCCGCCGCATGAAGAAGAGCCTGTCCGCCCCACTGCACCCCGAGTTTGAGGAGGTCTACAGGTTTGGAGCCGAGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
||
| CDS-3UTR CAA 90 bp | CCACCCCACCTGCTTCGTCCTCCCCGACCACCTCCTCCACAGTCCCTCGGTGCTTGCTTCCGCACCACCTaGCTTGCATTCACCTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PPHLLRPPRPPPPQSLGACFRTT*LAFTWS Trigger: GGACCAGGTGAATGCAAGCAAGGTGGTGCGGAAGCA...AGCACCGAGGGACTGTGGAGGAGGTGGTCGGGGAGGACGAAGCAGGTGGGGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
||
| CDS TCA 90 bp | TGGCTTATCTCGGGCTGGGCTGTGCTGCCCAGTGGCGCTACGATCTaGGGCAATGGGAGGGATGACGAGAGGCCGCTCCTTGAGCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: WLISGWAVLPSGATI*GNGRDDERPLLELD Trigger: GTCCAGCTCAAGGAGCGGCCTCTCGTCATCCCTCCCATTGCCTCAGATCGTAGCGCCACTGGGCAGCACAGCCCAGCCCGAGATAAGCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS GCA 90 bp | TATGTTAGATCTGTGCAGTGCTGCTGCAGCCGCCGGATCTCGGCGTaGAGCCCCTTGAGTGTGCTGGCGTGCTCCCGCTGGAGGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: YVRSVQCCCSRRISA*SPLSVLACSRWRKS Trigger: GCTCTTCCTCCAGCGGGAGCACGCCAGCACACTCAAGGGGCTGCACGCCGAGATCCGGCGGCTGCAGCAGCACTGCACAGATCTAACATA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036206.14 ENSMUST00000135495.8 ENSMUST00000143268.2 |
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| CDS GCA 90 bp | GGGTGGGGTCGGGCATGGCATCCACAGGCTCCCGAAGGAGGAGTTTaGGGCTCTCGGCTCCAAACCTGTAGACCTCCTCAAACTCGGGGT | + |
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Preference number: 5 (lower is better) Translates to: GWGRAWHPQAPEGGV*GSRLQTCRPPQTRG Trigger: ACCCCGAGTTTGAGGAGGTCTACAGGTTTGGAGCCGAGAGCCGCAAACTCCTCCTTCGGGAGCCTGTGGATGCCATGCCCGACCCCACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS CCA 90 bp | CGGATCTCGGCGTGCAGCCCCTTGAGTGTGCTGGCGTGCTCCCGCTaGAGGAAGAGCAGGTTCTTCTGTGCACTGTGCAGCTGGTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: RISACSPLSVLACSR*RKSRFFCALCSWFS Trigger: GGAGAACCAGCTGCACAGTGCACAGAAGAACCTGCTCTTCCTCCAGCGGGAGCACGCCAGCACACTCAAGGGGCTGCACGCCGAGATCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036206.14 ENSMUST00000135495.8 ENSMUST00000143268.2 |
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| CDS-3UTR CAA 90 bp | GCAGCAGCTTGCGGTTTTCCTCCTCTTTGGCCTTCAGCTGGGCTTCCAGCTCCTTCGGCGTGCAGCCCCTaGAGTGTGCTGGCGTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: AAACGFPPLWPSAGLPAPSACSP*SVLACS Trigger: GGAGCACGCCAGCACACTCAAGGGGCTGCACGCCGA...AGGAGCTGGAAGCCCAGCTGAAGGCCAAAGAGGAGGAAAACCGCAAGCTGCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135495.8 |
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| CDS CCA 90 bp | GGTCCACGGCCCTCATCTCTCCCTCAGGCTGGGCCTGTGATGGAGTaGCATGATGAATGCGGTGAGCCACCCCAACATGCGTCTTGTGTG | + |
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Preference number: 5 (lower is better) Translates to: GPRPSSLPQAGPVME*HDECGEPPQHASCV Trigger: CACACAAGACGCATGTTGGGGTGGCTCACCGCATTCATCATGCCACTCCATCACAGGCCCAGCCTGAGGGAGAGATGAGGGCCGTGGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS GCA 90 bp | ACCCCAACATGCGTCTTGTGTGGCTTATCTCGGGCTGGGCTGTGCTaGCCAGTGGCGCTACGATCTGAGGCAATGGGAGGGATGACGAGA | + |
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Preference number: 5 (lower is better) Translates to: TPTCVLCGLSRAGLC*PVALRSEAMGGMTR Trigger: TCTCGTCATCCCTCCCATTGCCTCAGATCGTAGCGCCACTGGGCAGCACAGCCCAGCCCGAGATAAGCCACACAAGACGCATGTTGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR CAA 90 bp | GGACAAATGGCCACTGGCTGCGTCTCTTACACTGTGAGACAGGGAGGCAGCGCCCGGTTTTCCTCCTCTTaGGCCTTCAGCTGGGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: GQMATGCVSYTVRQGGSARFSSS*AFSWAS Trigger: GGAAGCCCAGCTGAAGGCCAAAGAGGAGGAAAACCG...GGCGCTGCCTCCCTGTCTCACAGTGTAAGAGACGCAGCCAGTGGCCATTTGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR CAA 90 bp | ATTGTAGCATTGTGTCACTATGGAGCCAGGAGCCAGGTTTCGACAGGAGGAGACTCGGCGTGCAGCCCCTaGAGTGTGCTGGCGTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: IVALCHYGARSQVSTGGDSACSP*SVLACS Trigger: GGAGCACGCCAGCACACTCAAGGGGCTGCACGCCGA...GTCTCCTCCTGTCGAAACCTGGCTCCTGGCTCCATAGTGACACAATGCTACAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR CAA 90 bp | GGACAAATGGCCACTGGCTGCGTCTCTTACACTGTGAGACAGGGAGGCAGCGCCCTCAGCAACTTCTTCTaGGCTGCATGCAGCTGCGAG | + |
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Preference number: 5 (lower is better) Translates to: GQMATGCVSYTVRQGGSALSNFF*AACSCE Trigger: CTCGCAGCTGCATGCAGCCAAGAAGAAGTTGCTGAG...GGCGCTGCCTCCCTGTCTCACAGTGTAAGAGACGCAGCCAGTGGCCATTTGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS GCA 90 bp | TCATCTCTCCCTCAGGCTGGGCCTGTGATGGAGTGGCATGATGAATaGGGTGAGCCACCCCAACATGCGTCTTGTGTGGCTTATCTCGGG | + |
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Preference number: 5 (lower is better) Translates to: SSLPQAGPVMEWHDE*GEPPQHASCVAYLG Trigger: CCCGAGATAAGCCACACAAGACGCATGTTGGGGTGGCTCACCGCATTCATCATGCCACTCCATCACAGGCCCAGCCTGAGGGAGAGATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR CAA 90 bp | CCAGACCTCTTCTCTGTGTGGCCTTGGGACAAATGGCCACTGGCTGCGTCTCTTACCCCAACATGCGTCTaGTGTGGCTTATCTCGGGCT | + |
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Preference number: 5 (lower is better) Translates to: PDLFSVWPWDKWPLAASLTPTCV*CGLSRA Trigger: AGCCCGAGATAAGCCACACAAGACGCATGTTGGGGT...AAGAGACGCAGCCAGTGGCCATTTGTCCCAAGGCCACACAGAGAAGAGGTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR CAA 90 bp | CTTGCTAAGATCAGGAGCCACAGCTGCTTGGTAAAGGGACTGTGCAGGGCAGGGGACAGCATGCTCAGTTaGTGGCTCTTCACCTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: LAKIRSHSCLVKGLCRAGDSMLS*WLFTFS Trigger: GCTGAAGGTGAAGAGCCACAAACTGAGCATGCTGTC...CCCTGCCCTGCACAGTCCCTTTACCAAGCAGCTGTGGCTCCTGATCTTAGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR CAA 90 bp | CTGTGTATGTGTGAGAGCCTGCCTGAATATACGTGCACCACCTGTAAGGTGGTCTCCGCACCACCTTGCTaGCATTCACCTGGTCCACGG | + |
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Preference number: 5 (lower is better) Translates to: LCMCESLPEYTCTTCKVVSAPPC*HSPGPR Trigger: CCGTGGACCAGGTGAATGCAAGCAAGGTGGTGCGGA...GACCACCTTACAGGTGGTGCACGTATATTCAGGCAGGCTCTCACACATACACAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS-3UTR CAA 90 bp | GGACAAATGGCCACTGGCTGCGTCTCTTACACTGTGAGACAGGGAGGCAGCGCCGTCAGTTCGAAACTTTaGAGTGTCAGCTCATATGTT | + |
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Preference number: 5 (lower is better) Translates to: GQMATGCVSYTVRQGGSAVSSKL*SVSSYV Trigger: AACATATGAGCTGACACTCAAAAGTTTCGAACTGAC...GGCGCTGCCTCCCTGTCTCACAGTGTAAGAGACGCAGCCAGTGGCCATTTGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS TCA 90 bp | GCTCCGTCGTTCTGGAAGAGCTGTCTCCTGTCAGTTCGAAACTTTTaGGTGTCAGCTCATATGTTAGATCTGTGCAGTGCTGCTGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: APSFWKSCLLSVRNF*VSAHMLDLCSAAAA Trigger: GGCTGCAGCAGCACTGCACAGATCTAACATATGAGCTGACACTCAAAAGTTTCGAACTGACAGGAGACAGCTCTTCCAGAACGACGGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036206.14 ENSMUST00000143268.2 |
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| CDS-3UTR CAA 90 bp | TCTGTTCCAGTTCCTGCAGCAGCTTGCGGTTTTCCTCCTCTTTGGCCTTCAGCTGTCAGTTCGAAACTTTaGAGTGTCAGCTCATATGTT | + |
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Preference number: 5 (lower is better) Translates to: SVPVPAAACGFPPLWPSAVSSKL*SVSSYV Trigger: AACATATGAGCTGACACTCAAAAGTTTCGAACTGAC...AGCTGAAGGCCAAAGAGGAGGAAAACCGCAAGCTGCTGCAGGAACTGGAACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135495.8 |
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| CDS CCA 72 bp | GAGCTGGACCTCAGCAGACTCCCGGGCCAGCAGGAATaGGGTGGGGTCGGGCATGGCATCCACAGGCTCCCG | + |
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Preference number: 6 (lower is better) Translates to: ELDLSRLPGQQE*GGVGHGIHRLP Trigger: CGGGAGCCTGTGGATGCCATGCCCGACCCCACCCCATTCCTGCTGGCCCGGGAGTCTGCTGAGGTCCAGCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS TCA 72 bp | TCGGGCTGGGCTGTGCTGCCCAGTGGCGCTACGATCTaGGGCAATGGGAGGGATGACGAGAGGCCGCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: SGWAVLPSGATI*GNGRDDERPLL Trigger: AAGGAGCGGCCTCTCGTCATCCCTCCCATTGCCTCAGATCGTAGCGCCACTGGGCAGCACAGCCCAGCCCGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS CCA 72 bp | GCAATGGGAGGGATGACGAGAGGCCGCTCCTTGAGCTaGACCTCAGCAGACTCCCGGGCCAGCAGGAATGGG | + |
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Preference number: 6 (lower is better) Translates to: AMGGMTRGRSLS*TSADSRASRNG Trigger: CCCATTCCTGCTGGCCCGGGAGTCTGCTGAGGTCCAGCTCAAGGAGCGGCCTCTCGTCATCCCTCCCATTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS CCA 72 bp | GCGTGCAGCCCCTTGAGTGTGCTGGCGTGCTCCCGCTaGAGGAAGAGCAGGTTCTTCTGTGCACTGTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: ACSPLSVLACSR*RKSRFFCALCS Trigger: GCTGCACAGTGCACAGAAGAACCTGCTCTTCCTCCAGCGGGAGCACGCCAGCACACTCAAGGGGCTGCACGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036206.14 ENSMUST00000135495.8 ENSMUST00000143268.2 |
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| CDS CCA 72 bp | TCCAAACCTGTAGACCTCCTCAAACTCGGGGTGCAGTaGGGCGGACAGGCTCTTCTTCATGCGGCGGCGGGG | + |
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Preference number: 6 (lower is better) Translates to: SKPVDLLKLGVQ*GGQALLHAAAG Trigger: CCCCGCCGCCGCATGAAGAAGAGCCTGTCCGCCCCACTGCACCCCGAGTTTGAGGAGGTCTACAGGTTTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS CCA 72 bp | CCCTCATCTCTCCCTCAGGCTGGGCCTGTGATGGAGTaGCATGATGAATGCGGTGAGCCACCCCAACATGCG | + |
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Preference number: 6 (lower is better) Translates to: PSSLPQAGPVME*HDECGEPPQHA Trigger: CGCATGTTGGGGTGGCTCACCGCATTCATCATGCCACTCCATCACAGGCCCAGCCTGAGGGAGAGATGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS GCA 72 bp | CCTCAGGCTGGGCCTGTGATGGAGTGGCATGATGAATaGGGTGAGCCACCCCAACATGCGTCTTGTGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: PQAGPVMEWHDE*GEPPQHASCVA Trigger: AGCCACACAAGACGCATGTTGGGGTGGCTCACCGCATTCATCATGCCACTCCATCACAGGCCCAGCCTGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS GCA 72 bp | CAGTTCGGTCTGTCCCTGAGTGCTTCCGCACCACCTTaGTTGCATTCACCTGGTCCACGGCCCTCATCTCTC | + |
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Preference number: 6 (lower is better) Translates to: QFGLSLSASAPP*LHSPGPRPSSL Trigger: GAGAGATGAGGGCCGTGGACCAGGTGAATGCAAGCAAGGTGGTGCGGAAGCACTCAGGGACAGACCGAACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS CAA 72 bp | TTCGGTCTGTCCCTGAGTGCTTCCGCACCACCTTGCTaGCATTCACCTGGTCCACGGCCCTCATCTCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: FGLSLSASAPPC*HSPGPRPSSLP Trigger: AGGGAGAGATGAGGGCCGTGGACCAGGTGAATGCAAGCAAGGTGGTGCGGAAGCACTCAGGGACAGACCGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS GCA 72 bp | AGTGTCAGCTCATATGTTAGATCTGTGCAGTGCTGCTaGAGCCGCCGGATCTCGGCGTGCAGCCCCTTGAGT | + |
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Preference number: 6 (lower is better) Translates to: SVSSYVRSVQCC*SRRISACSPLS Trigger: ACTCAAGGGGCTGCACGCCGAGATCCGGCGGCTGCAGCAGCACTGCACAGATCTAACATATGAGCTGACACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036206.14 ENSMUST00000135495.8 ENSMUST00000143268.2 |
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| CDS CAA 72 bp | ACAGTTCGGTCTGTCCCTGAGTGCTTCCGCACCACCTaGCTTGCATTCACCTGGTCCACGGCCCTCATCTCT | + |
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Preference number: 6 (lower is better) Translates to: TVRSVPECFRTT*LAFTWSTALIS Trigger: AGAGATGAGGGCCGTGGACCAGGTGAATGCAAGCAAGGTGGTGCGGAAGCACTCAGGGACAGACCGAACTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036206.14 |
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| CDS CAA 90 bp | AGCTCCGTCGTTCTGGAAGAGCTGTCTCCTGTCAGTTCGAAACTTTaGAGTGTCAGCTCATATGTTAGATCTGTGCAGTGCTGCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SSVVLEELSPVSSKL*SVSSYVRSVQCCCS Trigger: GCTGCAGCAGCACTGCACAGATCTAACATATGAGCTGACACTCAAAAGTTTCGAACTGACAGGAGACAGCTCTTCCAGAACGACGGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036206.14 ENSMUST00000143268.2 |
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| CDS CAA 72 bp | CGTCTCTGGAGTGCCAGCTCTGTCAGTTCGAAACTTTaGAGTGTCAGCTCATATGTTAGATCTGTGCAGTGC | + |
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Preference number: 6 (lower is better) Translates to: RLWSASSVSSKL*SVSSYVRSVQC Trigger: GCACTGCACAGATCTAACATATGAGCTGACACTCAAAAGTTTCGAACTGACAGAGCTGGCACTCCAGAGACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135495.8 |
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| CDS TCA 72 bp | GTCTCTGGAGTGCCAGCTCTGTCAGTTCGAAACTTTTaGGTGTCAGCTCATATGTTAGATCTGTGCAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: VSGVPALSVRNF*VSAHMLDLCSA Trigger: AGCACTGCACAGATCTAACATATGAGCTGACACTCAAAAGTTTCGAACTGACAGAGCTGGCACTCCAGAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135495.8 |
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| CDS CAA 72 bp | GTTCTGGAAGAGCTGTCTCCTGTCAGTTCGAAACTTTaGAGTGTCAGCTCATATGTTAGATCTGTGCAGTGC | + |
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Preference number: 6 (lower is better) Translates to: VLEELSPVSSKL*SVSSYVRSVQC Trigger: GCACTGCACAGATCTAACATATGAGCTGACACTCAAAAGTTTCGAACTGACAGGAGACAGCTCTTCCAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036206.14 ENSMUST00000143268.2 |
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| CDS TCA 72 bp | TTCTGGAAGAGCTGTCTCCTGTCAGTTCGAAACTTTTaGGTGTCAGCTCATATGTTAGATCTGTGCAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: FWKSCLLSVRNF*VSAHMLDLCSA Trigger: AGCACTGCACAGATCTAACATATGAGCTGACACTCAAAAGTTTCGAACTGACAGGAGACAGCTCTTCCAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036206.14 ENSMUST00000143268.2 |
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