Pregenerated sensors for CCDC198 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021850Ensembl transcript IDs: ENSMUST00000022398.15, ENSMUST00000130853.2, ENSMUST00000148109.2, ENSMUST00000227113.2, ENSMUST00000228936.2
Found 168 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTAGTCCCCTGCCCCTGGGTCCAAGTTTCTCTGTGTAGCCCTGGTTaGCCTCAACTCATGGAGATCTGCCTTCCTCTGCCTTCTGAGTGC | + |
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Preference number: 1 (lower is better) Translates to: LVPCPWVQVSLCSPG*PQLMEICLPLPSEC Trigger: GCACTCAGAAGGCAGAGGAAGGCAGATCTCCATGAGTTGAGGGCAACCAGGGCTACACAGAGAAACTTGGACCCAGGGGCAGGGGACTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
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| 3UTR GCA 90 bp | TGTGTAGCCCTGGTTGCCCTCAACTCATGGAGATCTGCCTTCCTCTaGCTTCTGAGTGCCTGGATTAAAGGCGAGTGTCACCATTGCCCA | + |
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Preference number: 1 (lower is better) Translates to: CVALVALNSWRSAFL*LLSAWIKGECHHCP Trigger: TGGGCAATGGTGACACTCGCCTTTAATCCAGGCACTCAGAAGGCAGAGGAAGGCAGATCTCCATGAGTTGAGGGCAACCAGGGCTACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
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| 3UTR TCA 90 bp | CCCTGGTTGCCCTCAACTCATGGAGATCTGCCTTCCTCTGCCTTCTaGGTGCCTGGATTAAAGGCGAGTGTCACCATTGCCCAACTACAT | + |
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Preference number: 1 (lower is better) Translates to: PWLPSTHGDLPSSAF*VPGLKASVTIAQLH Trigger: ATGTAGTTGGGCAATGGTGACACTCGCCTTTAATCCAGGCACTCAGAAGGCAGAGGAAGGCAGATCTCCATGAGTTGAGGGCAACCAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
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| 3UTR CCA 90 bp | CTTGTGGTCTCCTCTCATCTTTCTCAAGCTCATCAGAGTCGGAGCTaGAACTGTCCCAGAAAAGCTGTCCCCGGGCTTCTTGTTCACGGA | + |
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Preference number: 1 (lower is better) Translates to: LVVSSHLSQAHQSRS*NCPRKAVPGLLVHG Trigger: TCCGTGAACAAGAAGCCCGGGGACAGCTTTTCTGGGACAGTTCCAGCTCCGACTCTGATGAGCTTGAGAAAGATGAGAGGAGACCACAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148109.2 |
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| 3UTR TCA 90 bp | GCACAGGCCCACTACCTTCTGTCCTTGGAAAATGTGAGCTCATCCTaGCGTGTCAGGTGTTTAGTCTTCTCACAGACTGGTTTGAAGAGA | + |
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Preference number: 1 (lower is better) Translates to: AQAHYLLSLENVSSS*RVRCLVFSQTGLKR Trigger: TCTCTTCAAACCAGTCTGTGAGAAGACTAAACACCTGACACGTCAGGATGAGCTCACATTTTCCAAGGACAGAAGGTAGTGGGCCTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
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| 3UTR CCA 90 bp | GCCCAGGCTGGTCACGAATTCATGATTTTTCTGACTCAGCCTCCTTaGTACTGGAATTACAGGCATGTTACTACCATGCTGCTGCTTTCT | + |
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Preference number: 1 (lower is better) Translates to: AQAGHEFMIFLTQPP*YWNYRHVTTMLLLS Trigger: AGAAAGCAGCAGCATGGTAGTAACATGCCTGTAATTCCAGTACCAAGGAGGCTGAGTCAGAAAAATCATGAATTCGTGACCAGCCTGGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
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| 3UTR TCA 90 bp | CTTGTGACTGCTGAGCCATCTCTCCAGCCCCCGATGTCACTATCTTaGATGCTCAGTTTCCCTTTCTATTTCAAGGTTTCAGATACACCA | + |
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Preference number: 1 (lower is better) Translates to: LVTAEPSLQPPMSLS*MLSFPFYFKVSDTP Trigger: TGGTGTATCTGAAACCTTGAAATAGAAAGGGAAACTGAGCATTCAAGATAGTGACATCGGGGGCTGGAGAGATGGCTCAGCAGTCACAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
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| 3UTR GCA 90 bp | GGCTTGCTCTGGGCGATTTTATTGCCATTATGGTCCTTCAGCTTTTaGATATCAAGCATCGCCTTACTCAGAAGACTCTTCCTCAACTCC | + |
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Preference number: 1 (lower is better) Translates to: GLLWAILLPLWSFSF*ISSIALLRRLFLNS Trigger: GGAGTTGAGGAAGAGTCTTCTGAGTAAGGCGATGCTTGATATGCAAAAGCTGAAGGACCATAATGGCAATAAAATCGCCCAGAGCAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148109.2 |
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| 3UTR CCA 90 bp | GTTTTCATTAGGCAGTATGGTGAGAATGTCATAGCCGTTGCTCCTTaGCTTGCTCTGGGCGATTTTATTGCCATTATGGTCCTTCAGCTT | + |
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Preference number: 1 (lower is better) Translates to: VFIRQYGENVIAVAP*LALGDFIAIMVLQL Trigger: AAGCTGAAGGACCATAATGGCAATAAAATCGCCCAGAGCAAGCCAAGGAGCAACGGCTATGACATTCTCACCATACTGCCTAATGAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148109.2 |
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| 3UTR TCA 90 bp | TTCTTCTCATTTTCCTGCTTTGTGTTGGACTTTGTTCTGCCTTCTTaGTGGCACAGAAGCCTTTCAGAGGTAATTGCTTGTGGCAGGTCA | + |
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Preference number: 1 (lower is better) Translates to: FFSFSCFVLDFVLPS*WHRSLSEVIACGRS Trigger: TGACCTGCCACAAGCAATTACCTCTGAAAGGCTTCTGTGCCATCAAGAAGGCAGAACAAAGTCCAACACAAAGCAGGAAAATGAGAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148109.2 |
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| 3UTR TCA 90 bp | ACGTGTGAAGAAGACACCAGGGATACTTTGAATCTGTCTGTCTACTaGAAGGGTCTTACCCTTTGGAGAAGGCTGGTGGTAAAACAATCT | + |
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Preference number: 1 (lower is better) Translates to: TCEEDTRDTLNLSVY*KGLTLWRRLVVKQS Trigger: AGATTGTTTTACCACCAGCCTTCTCCAAAGGGTAAGACCCTTTCAGTAGACAGACAGATTCAAAGTATCCCTGGTGTCTTCTTCACACGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
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| 3UTR TCA 90 bp | CAGAGCTACAGAGCAAGCAAATCAGCTCTCTCACAGAAGGCTCTGTaGGTCTCTTTGCAACAAACACATTCTGATGAGGGTTTGGAAAAT | + |
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Preference number: 1 (lower is better) Translates to: QSYRASKSALSQKAL*VSLQQTHSDEGLEN Trigger: ATTTTCCAAACCCTCATCAGAATGTGTTTGTTGCAAAGAGACTCACAGAGCCTTCTGTGAGAGAGCTGATTTGCTTGCTCTGTAGCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
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| 3UTR CCA 90 bp | TTGAGATGCACAGTGTTATTGAAAGTCTCCAGGATGGACACCTTTTaGTACCTATTCCCTTGTGTGGACTCTTTTCATTGGCTAGCATTT | + |
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Preference number: 1 (lower is better) Translates to: LRCTVLLKVSRMDTF*YLFPCVDSFHWLAF Trigger: AAATGCTAGCCAATGAAAAGAGTCCACACAAGGGAATAGGTACCAAAAGGTGTCCATCCTGGAGACTTTCAATAACACTGTGCATCTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
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| 3UTR TCA 90 bp | AACTGGTTTAAAGGAAAACATTACTACCTTGCCACACAGACTATGTaGAGAGACTCAGACTGTGTAGAAAGGGATCAAATTCCAGTTGTC | + |
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Preference number: 1 (lower is better) Translates to: NWFKGKHYYLATQTM*RDSDCVERDQIPVV Trigger: GACAACTGGAATTTGATCCCTTTCTACACAGTCTGAGTCTCTTCACATAGTCTGTGTGGCAAGGTAGTAATGTTTTCCTTTAAACCAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
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| 3UTR CCA 90 bp | ATATCAAGCATCGCCTTACTCAGAAGACTCTTCCTCAACTCCATTTaGGCCTCTTGTCTTTTATGGTTCATCTCTAGCATTTTCATCTTA | + |
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Preference number: 1 (lower is better) Translates to: ISSIALLRRLFLNSI*ASCLLWFISSIFIL Trigger: TAAGATGAAAATGCTAGAGATGAACCATAAAAGACAAGAGGCCCAAATGGAGTTGAGGAAGAGTCTTCTGAGTAAGGCGATGCTTGATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148109.2 |
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| 3UTR CCA 90 bp | ATTCTCTGTGTGACAGTCCAAGAATTCTTCATCTTGGGGATTTCCTaGATCTCTGTTTATGTTTTCATTAGGCAGTATGGTGAGAATGTC | + |
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Preference number: 1 (lower is better) Translates to: ILCVTVQEFFILGIS*ISVYVFIRQYGENV Trigger: GACATTCTCACCATACTGCCTAATGAAAACATAAACAGAGATCCAGGAAATCCCCAAGATGAAGAATTCTTGGACTGTCACACAGAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148109.2 |
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| 3UTR TCA 90 bp | TCAGTTTCCCTTTCTATTTCAAGGTTTCAGATACACCATAACGTGTaGAGAAGACACCAGGGATACTTTGAATCTGTCTGTCTACTGAAA | + |
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Preference number: 1 (lower is better) Translates to: SVSLSISRFQIHHNV*RRHQGYFESVCLLK Trigger: TTTCAGTAGACAGACAGATTCAAAGTATCCCTGGTGTCTTCTTCACACGTTATGGTGTATCTGAAACCTTGAAATAGAAAGGGAAACTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
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| 3UTR TCA 90 bp | TATAATAAGCCTTATGTATATAAGACTTTCGAAATAAAGGGAGTGTaGGCAACTGCAGAGCTGGGGCAATACAAATGCCTCCTAATTGAC | + |
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Preference number: 1 (lower is better) Translates to: YNKPYVYKTFEIKGV*ATAELGQYKCLLID Trigger: GTCAATTAGGAGGCATTTGTATTGCCCCAGCTCTGCAGTTGCTCACACTCCCTTTATTTCGAAAGTCTTATATACATAAGGCTTATTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
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| 3UTR-3UTR CCA 90 bp | GCCCCTGGGTCCAAGTTTCTCTGTGTAGCCCTGGTTGCCCTCAACTCATGGAGACATGTCTGTGGCCTCTaGCTTCCTCCAGCTGGCATA | + |
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Preference number: 2 (lower is better) Translates to: APGSKFLCVALVALNSWRHVCGL*LPPAGI Trigger: TATGCCAGCTGGAGGAAGCCAGAGGCCACAGACATG...TCTCCATGAGTTGAGGGCAACCAGGGCTACACAGAGAAACTTGGACCCAGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
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| 3UTR CAA 90 bp | AGTTGTAAACTGCCATCCGGGTACTGGGAACCTAACCTGGGTCCTTaGCAAGAGCAACACATGCTTGTGACTGCTGAGCCATCTCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: SCKLPSGYWEPNLGP*QEQHMLVTAEPSLQ Trigger: CTGGAGAGATGGCTCAGCAGTCACAAGCATGTGTTGCTCTTGCAAAGGACCCAGGTTAGGTTCCCAGTACCCGGATGGCAGTTTACAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
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| 3UTR-3UTR TCA 90 bp | GATCCTGGAGTAAAGGTGGCTACAGAGCTACAGAGCAAGCAAATCAGCTCTCTCTGTCCTTGGAAAATGTaGGCTCATCCTGACGTGTCA | + |
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Preference number: 2 (lower is better) Translates to: DPGVKVATELQSKQISSLCPWKM*AHPDVS Trigger: TGACACGTCAGGATGAGCTCACATTTTCCAAGGACA...GAGAGAGCTGATTTGCTTGCTCTGTAGCTCTGTAGCCACCTTTACTCCAGGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
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| 3UTR CAA 90 bp | AGCCCAGGCTGGTCACGAATTCATGATTTTTCTGACTCAGCCTCCTaGGTACTGGAATTACAGGCATGTTACTACCATGCTGCTGCTTTC | + |
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Preference number: 2 (lower is better) Translates to: SPGWSRIHDFSDSAS*VLELQACYYHAAAF Trigger: GAAAGCAGCAGCATGGTAGTAACATGCCTGTAATTCCAGTACCAAGGAGGCTGAGTCAGAAAAATCATGAATTCGTGACCAGCCTGGGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGTGGATTCAGTGATTACACACTTGTCATGTCTGTGGCCTCTGGCTTCCTCCAGTGAGACAAACAAATaGCCTCTGTTTCAGCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: RVDSVITHLSCLWPLASSSETNK*PLFQPL Trigger: AAGAGGCTGAAACAGAGGTCATTTGTTTGTCTCACT...GGAGGAAGCCAGAGGCCACAGACATGACAAGTGTGTAATCACTGAATCCACCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCAGGTGTTTAGTCTTCTCACAGACTGGTTTGAAGAGACTGAGTGTGAAATCCACTTGTCATGTCTGTaGCCTCTGGCTTCCTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: CQVFSLLTDWFEETECEIHLSCL*PLASSS Trigger: GCTGGAGGAAGCCAGAGGCCACAGACATGACAAGTG...GATTTCACACTCAGTCTCTTCAAACCAGTCTGTGAGAAGACTAAACACCTGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
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| 3UTR-3UTR TCA 90 bp | ACGTGTCAGGTGTTTAGTCTTCTCACAGACTGGTTTGAAGAGACTGAGTGTGAAACAGAACAACCTCACTaGGCCCAGCTACCAACAGAA | + |
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Preference number: 2 (lower is better) Translates to: TCQVFSLLTDWFEETECETEQPH*AQLPTE Trigger: TTCTGTTGGTAGCTGGGCTCAGTGAGGTTGTTCTGT...TTCACACTCAGTCTCTTCAAACCAGTCTGTGAGAAGACTAAACACCTGACACGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
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| 3UTR-3UTR TCA 90 bp | GATCCTGGAGTAAAGGTGGCTACAGAGCTACAGAGCAAGCAAATCAGCTCTCTCTGTGAGCACTTTCTGTaGGGGCAACTTACTTACAAA | + |
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Preference number: 2 (lower is better) Translates to: DPGVKVATELQSKQISSLCEHFL*GQLTYK Trigger: TTTGTAAGTAAGTTGCCCTCACAGAAAGTGCTCACA...GAGAGAGCTGATTTGCTTGCTCTGTAGCTCTGTAGCCACCTTTACTCCAGGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
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| 3UTR CAA 90 bp | TGGCTTGCTCTGGGCGATTTTATTGCCATTATGGTCCTTCAGCTTTaGCATATCAAGCATCGCCTTACTCAGAAGACTCTTCCTCAACTC | + |
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Preference number: 2 (lower is better) Translates to: WLALGDFIAIMVLQL*HIKHRLTQKTLPQL Trigger: GAGTTGAGGAAGAGTCTTCTGAGTAAGGCGATGCTTGATATGCAAAAGCTGAAGGACCATAATGGCAATAAAATCGCCCAGAGCAAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148109.2 |
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| 3UTR-3UTR TCA 90 bp | AGTGATTACACACTTGTCATGTCTGTGGCCTCTGGCTTCCTCCAGCTGGCATATCTACCAACAGAAAAGTaGGACAAACAAATGACCTCT | + |
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Preference number: 2 (lower is better) Translates to: SDYTLVMSVASGFLQLAYLPTEK*DKQMTS Trigger: AGAGGTCATTTGTTTGTCTCACTTTTCTGTTGGTAG...ATATGCCAGCTGGAGGAAGCCAGAGGCCACAGACATGACAAGTGTGTAATCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
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| 3UTR-3UTR TCA 90 bp | CCATTGCCCAACTACATGTTTCTAAAGGCAAACCAGTGCCAAGTTTTGAGATGCCTAGCATTTGGCCTATaGCTTGCGTTCACTGATAGG | + |
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Preference number: 2 (lower is better) Translates to: PLPNYMFLKANQCQVLRCLAFGL*LAFTDR Trigger: CCTATCAGTGAACGCAAGTCATAGGCCAAATGCTAG...GCATCTCAAAACTTGGCACTGGTTTGCCTTTAGAAACATGTAGTTGGGCAATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
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| 3UTR-3UTR GCA 90 bp | ACGTGTCAGGTGTTTAGTCTTCTCACAGACTGGTTTGAAGAGACTGAGTGTGAATTACTACCATGCTGCTaGTTTCTCTCTACTCCCCCT | + |
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Preference number: 2 (lower is better) Translates to: TCQVFSLLTDWFEETECELLPCC*FLSTPP Trigger: AGGGGGAGTAGAGAGAAAGCAGCAGCATGGTAGTAA...TTCACACTCAGTCTCTTCAAACCAGTCTGTGAGAAGACTAAACACCTGACACGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
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| 3UTR-3UTR CCA 90 bp | CTCATCTTTCTCAAGCTCATCAGAGTCGGAGCTGGAACTGTCCCAGAAAAGCTGAAGAATTCTTCATCTTaGGGATTTCCTGGATCTCTG | + |
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Preference number: 2 (lower is better) Translates to: LIFLKLIRVGAGTVPEKLKNSSS*GFPGSL Trigger: CAGAGATCCAGGAAATCCCCAAGATGAAGAATTCTT...CAGCTTTTCTGGGACAGTTCCAGCTCCGACTCTGATGAGCTTGAGAAAGATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148109.2 |
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| 3UTR CAA 90 bp | TTTCTTCTCATTTTCCTGCTTTGTGTTGGACTTTGTTCTGCCTTCTaGATGGCACAGAAGCCTTTCAGAGGTAATTGCTTGTGGCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: FLLIFLLCVGLCSAF*MAQKPFRGNCLWQV Trigger: GACCTGCCACAAGCAATTACCTCTGAAAGGCTTCTGTGCCATCAAGAAGGCAGAACAAAGTCCAACACAAAGCAGGAAAATGAGAAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148109.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGATTACACACTTGTCATGTCTGTGGCCTCTGGCTTCCTCCAGCTGGCATATAAAACATTACTACCTTaGCACACAGACTATGTGAAG | + |
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Preference number: 2 (lower is better) Translates to: SDYTLVMSVASGFLQLAYKTLLP*HTDYVK Trigger: CTTCACATAGTCTGTGTGGCAAGGTAGTAATGTTTT...ATATGCCAGCTGGAGGAAGCCAGAGGCCACAGACATGACAAGTGTGTAATCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
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| 3UTR-3UTR CCA 90 bp | TCATCTTTCTCAAGCTCATCAGAGTCGGAGCTGGAACTGTCCCAGAAAAGCTGTTTTCCTGCTTTGTGTTaGACTTTGTTCTGCCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: SSFSSSSESELELSQKSCFPALC*TLFCLL Trigger: AAGAAGGCAGAACAAAGTCCAACACAAAGCAGGAAA...ACAGCTTTTCTGGGACAGTTCCAGCTCCGACTCTGATGAGCTTGAGAAAGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148109.2 |
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| 3UTR-3UTR CCA 90 bp | GTTCACGGAGCCATGTTTCCATTTTGCCAATTTTCCGGACATAATAGTCATTCTATAGCCGTTGCTCCTTaGCTTGCTCTGGGCGATTTT | + |
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Preference number: 2 (lower is better) Translates to: VHGAMFPFCQFSGHNSHSIAVAP*LALGDF Trigger: AAAATCGCCCAGAGCAAGCCAAGGAGCAACGGCTAT...AGAATGACTATTATGTCCGGAAAATTGGCAAAATGGAAACATGGCTCCGTGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148109.2 |
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| 3UTR-3UTR TCA 90 bp | ACGTGTCAGGTGTTTAGTCTTCTCACAGACTGGTTTGAAGAGACTGAGTGTGAATTATTTTCCTCTATGTaGGCACTTTCTGTGAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: TCQVFSLLTDWFEETECELFSSM*ALSVRA Trigger: TGCCCTCACAGAAAGTGCTCACATAGAGGAAAATAA...TTCACACTCAGTCTCTTCAAACCAGTCTGTGAGAAGACTAAACACCTGACACGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
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| 3UTR CAA 90 bp | TTTGAGATGCACAGTGTTATTGAAAGTCTCCAGGATGGACACCTTTaGGTACCTATTCCCTTGTGTGGACTCTTTTCATTGGCTAGCATT | + |
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Preference number: 2 (lower is better) Translates to: FEMHSVIESLQDGHL*VPIPLCGLFSLASI Trigger: AATGCTAGCCAATGAAAAGAGTCCACACAAGGGAATAGGTACCAAAAGGTGTCCATCCTGGAGACTTTCAATAACACTGTGCATCTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
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| 3UTR CAA 90 bp | TTTCTAAAGGCAAACCAGTGCCAAGTTTTGAGATGCACAGTGTTATaGAAAGTCTCCAGGATGGACACCTTTTGGTACCTATTCCCTTGT | + |
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Preference number: 2 (lower is better) Translates to: FLKANQCQVLRCTVL*KVSRMDTFWYLFPC Trigger: ACAAGGGAATAGGTACCAAAAGGTGTCCATCCTGGAGACTTTCAATAACACTGTGCATCTCAAAACTTGGCACTGGTTTGCCTTTAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGACAGTCCAAGAATTCTTCATCTTGGGGATTTCCTGGATCTCTGTTTATGTTTTGTTCTGCCTTCTTaGTGGCACAGAAGCCTTTCA | + |
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Preference number: 2 (lower is better) Translates to: CDSPRILHLGDFLDLCLCFVLPS*WHRSLS Trigger: TGAAAGGCTTCTGTGCCATCAAGAAGGCAGAACAAA...ACATAAACAGAGATCCAGGAAATCCCCAAGATGAAGAATTCTTGGACTGTCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148109.2 |
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| 3UTR-3UTR GCA 90 bp | CTTACCCTTTGGAGAAGGCTGGTGGTAAAACAATCTAGGATTGATTATTTTTCTAGATCTGCCTTCCTCTaGCTTCTGAGTGCCTGGATT | + |
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Preference number: 2 (lower is better) Translates to: LTLWRRLVVKQSRIDYFSRSAFL*LLSAWI Trigger: AATCCAGGCACTCAGAAGGCAGAGGAAGGCAGATCT...AGAAAAATAATCAATCCTAGATTGTTTTACCACCAGCCTTCTCCAAAGGGTAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
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| 3UTR-3UTR TCA 90 bp | ACGTGTCAGGTGTTTAGTCTTCTCACAGACTGGTTTGAAGAGACTGAGTGTGAACTTGTAGCATCATGGTaGTGTTTCTTTAAAAGCTCA | + |
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Preference number: 2 (lower is better) Translates to: TCQVFSLLTDWFEETECELVASW*CFFKSS Trigger: TGAGCTTTTAAAGAAACATCACCATGATGCTACAAG...TTCACACTCAGTCTCTTCAAACCAGTCTGTGAGAAGACTAAACACCTGACACGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
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| 3UTR-3UTR GCA 90 bp | GCCATGTTTCCATTTTGCCAATTTTCCGGACATAATAGTCATTCTCTGTGTGACTGGTCCTTCAGCTTTTaGATATCAAGCATCGCCTTA | + |
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Preference number: 2 (lower is better) Translates to: AMFPFCQFSGHNSHSLCDWSFSF*ISSIAL Trigger: TAAGGCGATGCTTGATATGCAAAAGCTGAAGGACCA...GTCACACAGAGAATGACTATTATGTCCGGAAAATTGGCAAAATGGAAACATGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000148109.2 |
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| 3UTR-3UTR CCA 90 bp | TTGTTCACGGAGCCATGTTTCCATTTTGCCAATTTTCCGGACATAATAGTCATTAGAGGTAATTGCTTGTaGCAGGTCAATGGGTTCAAG | + |
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Preference number: 2 (lower is better) Translates to: LFTEPCFHFANFPDIIVIRGNCL*QVNGFK Trigger: CTTGAACCCATTGACCTGCCACAAGCAATTACCTCT...AATGACTATTATGTCCGGAAAATTGGCAAAATGGAAACATGGCTCCGTGAACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148109.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGGAAGTATGCCCATGTACCACATGCATGCAATTTCTACAGAGGTCAAAAGATGCCAAGTTTTGAGATaGACAGTGTTATTGAAAGTC | + |
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Preference number: 2 (lower is better) Translates to: LGSMPMYHMHAISTEVKRCQVLR*TVLLKV Trigger: GACTTTCAATAACACTGTGCATCTCAAAACTTGGCA...TCTTTTGACCTCTGTAGAAATTGCATGCATGTGGTACATGGGCATACTTCCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
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| 3UTR-3UTR CCA 90 bp | CTTACCCTTTGGAGAAGGCTGGTGGTAAAACAATCTAGGATTGATTATTTTTCTAGGATGGACACCTTTTaGTACCTATTCCCTTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: LTLWRRLVVKQSRIDYFSRMDTF*YLFPCV Trigger: CACACAAGGGAATAGGTACCAAAAGGTGTCCATCCT...AGAAAAATAATCAATCCTAGATTGTTTTACCACCAGCCTTCTCCAAAGGGTAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
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| 3UTR CAA 90 bp | GACATAATAGTCATTCTCTGTGTGACAGTCCAAGAATTCTTCATCTaGGGGATTTCCTGGATCTCTGTTTATGTTTTCATTAGGCAGTAT | + |
|
Preference number: 2 (lower is better) Translates to: DIIVILCVTVQEFFI*GISWISVYVFIRQY Trigger: ATACTGCCTAATGAAAACATAAACAGAGATCCAGGAAATCCCCAAGATGAAGAATTCTTGGACTGTCACACAGAGAATGACTATTATGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148109.2 |
||
| 3UTR CAA 90 bp | TTACTGAGGGTTGGGAAACTTGAATTGCTTAAAGGCATTTGTAGATaGTGTGAAGCAGTCAGAATTTTGAGCTTTAATTCCTCAATGACC | + |
|
Preference number: 2 (lower is better) Translates to: LLRVGKLELLKGICR*CEAVRILSFNSSMT Trigger: GGTCATTGAGGAATTAAAGCTCAAAATTCTGACTGCTTCACACAATCTACAAATGCCTTTAAGCAATTCAAGTTTCCCAACCCTCAGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTACCCTTTGGAGAAGGCTGGTGGTAAAACAATCTAGGATTGATTATTTTTCTTCTAGACAAGAAGTATaGAAAGGAAGCAGAGAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: LTLWRRLVVKQSRIDYFSSRQEV*KGSREK Trigger: TTTTTCTCTGCTTCCTTTCCATACTTCTTGTCTAGA...AGAAAAATAATCAATCCTAGATTGTTTTACCACCAGCCTTCTCCAAAGGGTAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| 3UTR GCA 72 bp | TGCCCCTGGGTCCAAGTTTCTCTGTGTAGCCCTGGTTaGCCTCAACTCATGGAGATCTGCCTTCCTCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: CPWVQVSLCSPG*PQLMEICLPLP Trigger: AGGCAGAGGAAGGCAGATCTCCATGAGTTGAGGGCAACCAGGGCTACACAGAGAAACTTGGACCCAGGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| 3UTR TCA 72 bp | CTAACCTGGGTCCTTTGCAAGAGCAACACATGCTTGTaGCTGCTGAGCCATCTCTCCAGCCCCCGATGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: LTWVLCKSNTCL*LLSHLSSPRCH Trigger: GTGACATCGGGGGCTGGAGAGATGGCTCAGCAGTCACAAGCATGTGTTGCTCTTGCAAAGGACCCAGGTTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| 3UTR TCA 72 bp | ACAGGTCCTGTTTCCTGTCCCACTTGTAGACAGGGCTaGGGTTCTTGTAGGTGGCACATGTCTGCAGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: TGPVSCPTCRQG*GSCRWHMSAAT Trigger: TGTGGCTGCAGACATGTGCCACCTACAAGAACCTCAGCCCTGTCTACAAGTGGGACAGGAAACAGGACCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022398.15 |
||
| 3UTR CCA 72 bp | AAGTTTCTCTGTGTAGCCCTGGTTGCCCTCAACTCATaGAGATCTGCCTTCCTCTGCCTTCTGAGTGCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: KFLCVALVALNS*RSAFLCLLSAW Trigger: CCAGGCACTCAGAAGGCAGAGGAAGGCAGATCTCCATGAGTTGAGGGCAACCAGGGCTACACAGAGAAACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| 3UTR TCA 72 bp | ACAGGTCCTGTTTCCTGTCCCACTTGTAGACAGTGCTaGGGTTCTTGTAGGTGGCACATGTCTGCAGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: TGPVSCPTCRQC*GSCRWHMSAAT Trigger: TGTGGCTGCAGACATGTGCCACCTACAAGAACCTCAGCACTGTCTACAAGTGGGACAGGAAACAGGACCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022398.15 |
||
| 3UTR GCA 72 bp | CTTGGTACTGGAATTACAGGCATGTTACTACCATGCTaGTGCTTTCTCTCTACTCCCCCTAGTCCCCTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: LGTGITGMLLPC*CFLSTPPSPLP Trigger: GGGCAGGGGACTAGGGGGAGTAGAGAGAAAGCAGCAGCATGGTAGTAACATGCCTGTAATTCCAGTACCAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| 3UTR CCA 72 bp | TCCTCTCATCTTTCTCAAGCTCATCAGAGTCGGAGCTaGAACTGTCCCAGAAAAGCTGTCCCCGGGCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SSHLSQAHQSRS*NCPRKAVPGLL Trigger: AAGAAGCCCGGGGACAGCTTTTCTGGGACAGTTCCAGCTCCGACTCTGATGAGCTTGAGAAAGATGAGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148109.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGTCGGAGCTGGAACTGTCCCAGAAAAGCTGTCCCCGGGCTTCTTGTTCACCAAGAATTCTTCATCTaGGGGATTTCCTGGATCTCT | + |
|
Preference number: 3 (lower is better) Translates to: QSRSWNCPRKAVPGLLVHQEFFI*GISWIS Trigger: AGAGATCCAGGAAATCCCCAAGATGAAGAATTCTTG...GTGAACAAGAAGCCCGGGGACAGCTTTTCTGGGACAGTTCCAGCTCCGACTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000148109.2 |
||
| 3UTR GCA 72 bp | CTCCTTGGTACTGGAATTACAGGCATGTTACTACCATaGTGCTGCTTTCTCTCTACTCCCCCTAGTCCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LLGTGITGMLLP*CCFLSTPPSPL Trigger: CAGGGGACTAGGGGGAGTAGAGAGAAAGCAGCAGCATGGTAGTAACATGCCTGTAATTCCAGTACCAAGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| 3UTR CCA 72 bp | TCATGGAGATCTGCCTTCCTCTGCCTTCTGAGTGCCTaGATTAAAGGCGAGTGTCACCATTGCCCAACTACA | + |
|
Preference number: 3 (lower is better) Translates to: SWRSAFLCLLSA*IKGECHHCPTT Trigger: TGTAGTTGGGCAATGGTGACACTCGCCTTTAATCCAGGCACTCAGAAGGCAGAGGAAGGCAGATCTCCATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| 3UTR-3UTR CAA 90 bp | GATCCTGGAGTAAAGGTGGCTACAGAGCTACAGAGCAAGCAAATCAGCTCTCTCAGTTGTCTTGTGCCCTaGCTCAGCCTCTTTGTGACT | + |
|
Preference number: 3 (lower is better) Translates to: DPGVKVATELQSKQISSLSCLVP*LSLFVT Trigger: AGTCACAAAGAGGCTGAGCAAGGGCACAAGACAACT...GAGAGAGCTGATTTGCTTGCTCTGTAGCTCTGTAGCCACCTTTACTCCAGGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| 3UTR CCA 72 bp | AGGGTGGATTCAGTGATTACACACTTGTCATGTCTGTaGCCTCTGGCTTCCTCCAGCTGGCATATTTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: RVDSVITHLSCL*PLASSSWHICC Trigger: ACAGCAAATATGCCAGCTGGAGGAAGCCAGAGGCCACAGACATGACAAGTGTGTAATCACTGAATCCACCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| 3UTR CCA 72 bp | GGAGTTACAGATAGTTGTAAACTGCCATCCGGGTACTaGGAACCTAACCTGGGTCCTTTGCAAGAGCAACAC | + |
|
Preference number: 3 (lower is better) Translates to: GVTDSCKLPSGY*EPNLGPLQEQH Trigger: GTGTTGCTCTTGCAAAGGACCCAGGTTAGGTTCCCAGTACCCGGATGGCAGTTTACAACTATCTGTAACTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCATCTTTCTCAAGCTCATCAGAGTCGGAGCTGGAACTGTCCCAGAAAAGCTGCTCCATTTGGGCCTCTaGTCTTTTATGGTTCATCTC | + |
|
Preference number: 3 (lower is better) Translates to: LIFLKLIRVGAGTVPEKLLHLGL*SFMVHL Trigger: GAGATGAACCATAAAAGACAAGAGGCCCAAATGGAG...CAGCTTTTCTGGGACAGTTCCAGCTCCGACTCTGATGAGCTTGAGAAAGATGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148109.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTCTCATCTTTCTCAAGCTCATCAGAGTCGGAGCTGGAACTGTCCCAGAAAAGTCTCATTTTCCTGCTTaGTGTTGGACTTTGTTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: PLIFLKLIRVGAGTVPEKSHFPA*CWTLFC Trigger: GCAGAACAAAGTCCAACACAAAGCAGGAAAATGAGA...CTTTTCTGGGACAGTTCCAGCTCCGACTCTGATGAGCTTGAGAAAGATGAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148109.2 |
||
| 3UTR TCA 72 bp | CACTACCTTCTGTCCTTGGAAAATGTGAGCTCATCCTaGCGTGTCAGGTGTTTAGTCTTCTCACAGACTGGT | + |
|
Preference number: 3 (lower is better) Translates to: HYLLSLENVSSS*RVRCLVFSQTG Trigger: ACCAGTCTGTGAGAAGACTAAACACCTGACACGTCAGGATGAGCTCACATTTTCCAAGGACAGAAGGTAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| 3UTR TCA 72 bp | GAAGACACCAGGGATACTTTGAATCTGTCTGTCTACTaGAAGGGTCTTACCCTTTGGAGAAGGCTGGTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: EDTRDTLNLSVY*KGLTLWRRLVV Trigger: TACCACCAGCCTTCTCCAAAGGGTAAGACCCTTTCAGTAGACAGACAGATTCAAAGTATCCCTGGTGTCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| 3UTR-3UTR CAA 90 bp | CATTCTCTGTGTGACAGTCCAAGAATTCTTCATCTTGGGGATTTCCTGGATCTCTTCAGAGGTAATTGCTaGTGGCAGGTCAATGGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: HSLCDSPRILHLGDFLDLFRGNC*WQVNGF Trigger: GAACCCATTGACCTGCCACAAGCAATTACCTCTGAA...GAGATCCAGGAAATCCCCAAGATGAAGAATTCTTGGACTGTCACACAGAGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148109.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCTCTCATCTTTCTCAAGCTCATCAGAGTCGGAGCTGGAACTGTCCCAGAAAATTTTCCTGCTTTGTGTaGGACTTTGTTCTGCCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: SSHLSQAHQSRSWNCPRKFSCFV*DFVLPS Trigger: AGAAGGCAGAACAAAGTCCAACACAAAGCAGGAAAA...TTTTCTGGGACAGTTCCAGCTCCGACTCTGATGAGCTTGAGAAAGATGAGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148109.2 |
||
| 3UTR TCA 72 bp | AGAGCAAGCAAATCAGCTCTCTCACAGAAGGCTCTGTaGGTCTCTTTGCAACAAACACATTCTGATGAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: RASKSALSQKAL*VSLQQTHSDEG Trigger: ACCCTCATCAGAATGTGTTTGTTGCAAAGAGACTCACAGAGCCTTCTGTGAGAGAGCTGATTTGCTTGCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCCTGGGAATTAAAAGAAGCACAGGCCCACTACCTTCTGTCCTTGGAAAATGTCATTTGGCCTATGACTaGCGTTCACTGATAGGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: TLGIKRSTGPLPSVLGKCHLAYD*RSLIGN Trigger: ATTTCCTATCAGTGAACGCAAGTCATAGGCCAAATG...ACATTTTCCAAGGACAGAAGGTAGTGGGCCTGTGCTTCTTTTAATTCCCAGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| 3UTR-3UTR CAA 90 bp | ACGTGTCAGGTGTTTAGTCTTCTCACAGACTGGTTTGAAGAGACTGAGTGTGAAAGATGCACAGTGTTATaGAAAGTCTCCAGGATGGAC | + |
|
Preference number: 3 (lower is better) Translates to: TCQVFSLLTDWFEETECERCTVL*KVSRMD Trigger: GTCCATCCTGGAGACTTTCAATAACACTGTGCATCT...TTCACACTCAGTCTCTTCAAACCAGTCTGTGAGAAGACTAAACACCTGACACGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| 3UTR TCA 72 bp | ATAGGAAATGGTAGAAGTGGTTTAGGGTGGATTCAGTaGTTACACACTTGTCATGTCTGTGGCCTCTGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: IGNGRSGLGWIQ*LHTCHVCGLWL Trigger: AAGCCAGAGGCCACAGACATGACAAGTGTGTAATCACTGAATCCACCCTAAACCACTTCTACCATTTCCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| 3UTR CCA 72 bp | GGTCACGAATTCATGATTTTTCTGACTCAGCCTCCTTaGTACTGGAATTACAGGCATGTTACTACCATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: GHEFMIFLTQPP*YWNYRHVTTML Trigger: CAGCATGGTAGTAACATGCCTGTAATTCCAGTACCAAGGAGGCTGAGTCAGAAAAATCATGAATTCGTGACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| 3UTR TCA 72 bp | CCTTATGTATATAAGACTTTCGAAATAAAGGGAGTGTaGGCAACTGCAGAGCTGGGGCAATACAAATGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: PYVYKTFEIKGV*ATAELGQYKCL Trigger: GAGGCATTTGTATTGCCCCAGCTCTGCAGTTGCTCACACTCCCTTTATTTCGAAAGTCTTATATACATAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| 3UTR GCA 72 bp | TGGGCGATTTTATTGCCATTATGGTCCTTCAGCTTTTaGATATCAAGCATCGCCTTACTCAGAAGACTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: WAILLPLWSFSF*ISSIALLRRLF Trigger: GAAGAGTCTTCTGAGTAAGGCGATGCTTGATATGCAAAAGCTGAAGGACCATAATGGCAATAAAATCGCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148109.2 |
||
| 3UTR GCA 72 bp | TGGATGTTTTACTTGGAAGTATGCCCATGTACCACATaGATGCAATTTCTACAGAGGTCAAAAGAGGGCATC | + |
|
Preference number: 3 (lower is better) Translates to: WMFYLEVCPCTT*MQFLQRSKEGI Trigger: GATGCCCTCTTTTGACCTCTGTAGAAATTGCATGCATGTGGTACATGGGCATACTTCCAAGTAAAACATCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| 3UTR CCA 72 bp | ATCGCCTTACTCAGAAGACTCTTCCTCAACTCCATTTaGGCCTCTTGTCTTTTATGGTTCATCTCTAGCATT | + |
|
Preference number: 3 (lower is better) Translates to: IALLRRLFLNSI*ASCLLWFISSI Trigger: AATGCTAGAGATGAACCATAAAAGACAAGAGGCCCAAATGGAGTTGAGGAAGAGTCTTCTGAGTAAGGCGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148109.2 |
||
| 3UTR CCA 72 bp | ACAGTGTTATTGAAAGTCTCCAGGATGGACACCTTTTaGTACCTATTCCCTTGTGTGGACTCTTTTCATTGG | + |
|
Preference number: 3 (lower is better) Translates to: TVLLKVSRMDTF*YLFPCVDSFHW Trigger: CCAATGAAAAGAGTCCACACAAGGGAATAGGTACCAAAAGGTGTCCATCCTGGAGACTTTCAATAACACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| 3UTR CCA 72 bp | GAATTCATGATTTTTCTGACTCAGCCTCCTTGGTACTaGAATTACAGGCATGTTACTACCATGCTGCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: EFMIFLTQPPWY*NYRHVTTMLLL Trigger: AAGCAGCAGCATGGTAGTAACATGCCTGTAATTCCAGTACCAAGGAGGCTGAGTCAGAAAAATCATGAATTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| 3UTR GCA 72 bp | CCATTGCCCAACTACATGTTTCTAAAGGCAAACCAGTaGCAAGTTTTGAGATGCACAGTGTTATTGAAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: PLPNYMFLKANQ*QVLRCTVLLKV Trigger: GACTTTCAATAACACTGTGCATCTCAAAACTTGGCACTGGTTTGCCTTTAGAAACATGTAGTTGGGCAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTCAGGTGTTTAGTCTTCTCACAGACTGGTTTGAAGAGACTGAGTGTGAAATCGTTGGGAAACTTGAATaGCTTAAAGGCATTTGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: CQVFSLLTDWFEETECEIVGKLE*LKGICR Trigger: TCTACAAATGCCTTTAAGCAATTCAAGTTTCCCAAC...GATTTCACACTCAGTCTCTTCAAACCAGTCTGTGAGAAGACTAAACACCTGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| 3UTR TCA 72 bp | AACTGCAGAGCTGGGGCAATACAAATGCCTCCTAATTaGCTGGGTGACAAAACACATAAATTATTCACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: NCRAGAIQMPPN*LGDKTHKLFTN Trigger: GTTTGTGAATAATTTATGTGTTTTGTCACCCAGTCAATTAGGAGGCATTTGTATTGCCCCAGCTCTGCAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| 3UTR TCA 72 bp | ATAGTATATTGTCTGGAACTTACAGTGGTGTTGGATTaGGGTCATCCACTTAGATGTGCACATTCCAAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: IVYCLELTVVLD*GHPLRCAHSKN Trigger: GTTCTTGGAATGTGCACATCTAAGTGGATGACCTCAATCCAACACCACTGTAAGTTCCAGACAATATACTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| 3UTR TCA 72 bp | AAAGGAAAACATTACTACCTTGCCACACAGACTATGTaGAGAGACTCAGACTGTGTAGAAAGGGATCAAATT | + |
|
Preference number: 3 (lower is better) Translates to: KGKHYYLATQTM*RDSDCVERDQI Trigger: AATTTGATCCCTTTCTACACAGTCTGAGTCTCTTCACATAGTCTGTGTGGCAAGGTAGTAATGTTTTCCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| 3UTR TCA 72 bp | GGTCATCCACTTAGATGTGCACATTCCAAGAACTTCTaGGAAGTCTCTTTACTGTATAATAAGCCTTATGTA | + |
|
Preference number: 3 (lower is better) Translates to: GHPLRCAHSKNF*EVSLLYNKPYV Trigger: TACATAAGGCTTATTATACAGTAAAGAGACTTCTCAGAAGTTCTTGGAATGTGCACATCTAAGTGGATGACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| 3UTR GCA 72 bp | TATTTTGTATGTACATGGATGTTTTACTTGGAAGTATaGCCATGTACCACATGCATGCAATTTCTACAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: YFVCTWMFYLEV*PCTTCMQFLQR Trigger: CCTCTGTAGAAATTGCATGCATGTGGTACATGGGCATACTTCCAAGTAAAACATCCATGTACATACAAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| CDS-3UTR TCA 90 bp | GACAGGGCTGAGGTTCTTGTAGGTGGCACATGTCTGCAGCCACAGGTCCTGTTTTTGATCACCCGAGGGTaGGCCTTGGAGTGGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DRAEVLVGGTCLQPQVLFLITRG*ALEWPR Trigger: CCTGGGCCACTCCAAGGCTCACCCTCGGGTGATCAA...AAACAGGACCTGTGGCTGCAGACATGTGCCACCTACAAGAACCTCAGCCCTGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022398.15 |
||
| CDS-3UTR TCA 90 bp | CTCATCTTTCTCAAGCTCATCAGAGTCGGAGCTGGAACTGTCCCAGAAAAGCTGTTGATCACCCGAGGGTaGGCCTTGGAGTGGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LIFLKLIRVGAGTVPEKLLITRG*ALEWPR Trigger: CCTGGGCCACTCCAAGGCTCACCCTCGGGTGATCAA...CAGCTTTTCTGGGACAGTTCCAGCTCCGACTCTGATGAGCTTGAGAAAGATGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148109.2 |
||
| 3UTR CAA 72 bp | CTGCCATCCGGGTACTGGGAACCTAACCTGGGTCCTTaGCAAGAGCAACACATGCTTGTGACTGCTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPSGYWEPNLGP*QEQHMLVTAEP Trigger: TGGCTCAGCAGTCACAAGCATGTGTTGCTCTTGCAAAGGACCCAGGTTAGGTTCCCAGTACCCGGATGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| CDS-3UTR CCA 90 bp | GGTTCTTGTAGGTGGCACATGTCTGCAGCCACAGGTCCTGTTTCCTGTCCCACTCAAGATACATGGCCCTaGATACTGCCGGGAGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSCRWHMSAATGPVSCPTQDTWP*ILPGVF Trigger: GAAGACTCCCGGCAGTATCCAGGGCCATGTATCTTG...AGTGGGACAGGAAACAGGACCTGTGGCTGCAGACATGTGCCACCTACAAGAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022398.15 |
||
| CDS-3UTR CCA 90 bp | GCCCCTGGGTCCAAGTTTCTCTGTGTAGCCCTGGTTGCCCTCAACTCATGGAGACCTCACCAGTGCTTGTaGTCTCCTCTCATCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: APGSKFLCVALVALNSWRPHQCL*SPLIFL Trigger: GAGAAAGATGAGAGGAGACCACAAGCACTGGTGAGG...TCTCCATGAGTTGAGGGCAACCAGGGCTACACAGAGAAACTTGGACCCAGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| CDS-3UTR TCA 90 bp | CTGCAGCCACAGGTCCTGTTTCCTGTCCCACTTGTAGACAGTGCTGAGGTTCTTGAACACAGGGCCAGTTaGGGGTGTCTCTGTTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LQPQVLFPVPLVDSAEVLEHRAS*GCLCFL Trigger: CAAGAAACAGAGACACCCTCAACTGGCCCTGTGTTC...AAGAACCTCAGCACTGTCTACAAGTGGGACAGGAAACAGGACCTGTGGCTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022398.15 |
||
| CDS-3UTR TCA 90 bp | CTGTCCCAGAAAAGCTGTCCCCGGGCTTCTTGTTCACGGAGCCATGTTTCCATTGAACACAGGGCCAGTTaGGGGTGTCTCTGTTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSQKSCPRASCSRSHVSIEHRAS*GCLCFL Trigger: CAAGAAACAGAGACACCCTCAACTGGCCCTGTGTTC...AATGGAAACATGGCTCCGTGAACAAGAAGCCCGGGGACAGCTTTTCTGGGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000148109.2 |
||
| CDS-3UTR TCA 90 bp | CAGAGTCGGAGCTGGAACTGTCCCAGAAAAGCTGTCCCCGGGCTTCTTGTTCACCTGCAGTCTCGTGAATaGGCTTTCTTCTTCCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QSRSWNCPRKAVPGLLVHLQSRE*AFFFQV Trigger: AACCTGGAAGAAGAAAGCTCATTCACGAGACTGCAG...GTGAACAAGAAGCCCGGGGACAGCTTTTCTGGGACAGTTCCAGCTCCGACTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148109.2 |
||
| CDS-3UTR CCA 90 bp | GCTGAGGTTCTTGTAGGTGGCACATGTCTGCAGCCACAGGTCCTGTTTCCTGTCATAGCCGTTGCTCCTTaGCTTGCTCTGGGCGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: AEVLVGGTCLQPQVLFPVIAVAP*LALGDF Trigger: AAAATCGCCCAGAGCAAGCCAAGGAGCAACGGCTAT...GACAGGAAACAGGACCTGTGGCTGCAGACATGTGCCACCTACAAGAACCTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022398.15 |
||
| CDS-3UTR CCA 90 bp | GGTTCTTGTAGGTGGCACATGTCTGCAGCCACAGGTCCTGTTTCCTGTCCCACTCCTCACCAGTGCTTGTaGTCTCCTCTCATCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GSCRWHMSAATGPVSCPTPHQCL*SPLIFL Trigger: GAGAAAGATGAGAGGAGACCACAAGCACTGGTGAGG...AGTGGGACAGGAAACAGGACCTGTGGCTGCAGACATGTGCCACCTACAAGAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022398.15 |
||
| CDS-3UTR TCA 90 bp | TGTCTGCAGCCACAGGTCCTGTTTCCTGTCCCACTTGTAGACAGTGCTGAGGTTGGTCCTGCAGTCTCGTaGATGAGCTTTCTTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CLQPQVLFPVPLVDSAEVGPAVS*MSFLLP Trigger: TGGAAGAAGAAAGCTCATTCACGAGACTGCAGGACC...AACCTCAGCACTGTCTACAAGTGGGACAGGAAACAGGACCTGTGGCTGCAGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022398.15 |
||
| CDS-3UTR CCA 90 bp | CTTGTAGACAGTGCTGAGGTTCTTGTAGGTGGCACATGTCTGCAGCCACAGGTCGGATCTTCTCTGTCTTaGTCCTCACCAGTGCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LVDSAEVLVGGTCLQPQVGSSLS*SSPVLV Trigger: CACAAGCACTGGTGAGGACCAAGACAGAGAAGATCC...GACCTGTGGCTGCAGACATGTGCCACCTACAAGAACCTCAGCACTGTCTACAAG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022398.15 |
||
| CDS-3UTR TCA 90 bp | CTTGTAGGTGGCACATGTCTGCAGCCACAGGTCCTGTTTCCTGTCCCACTTGTACTGCAGTCTCGTGAATaGGCTTTCTTCTTCCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LVGGTCLQPQVLFPVPLVLQSRE*AFFFQV Trigger: AACCTGGAAGAAGAAAGCTCATTCACGAGACTGCAG...TACAAGTGGGACAGGAAACAGGACCTGTGGCTGCAGACATGTGCCACCTACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022398.15 |
||
| CDS-3UTR GCA 90 bp | CTGCAGCCACAGGTCCTGTTTCCTGTCCCACTTGTAGACAGTGCTGAGGTTCTTCCTTTCAGAGGTAATTaGTTGTGGCAGGTCAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: LQPQVLFPVPLVDSAEVLPFRGN*LWQVNG Trigger: CCCATTGACCTGCCACAAGCAATTACCTCTGAAAGG...AAGAACCTCAGCACTGTCTACAAGTGGGACAGGAAACAGGACCTGTGGCTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022398.15 |
||
| CDS-3UTR TCA 90 bp | AGTGATTACACACTTGTCATGTCTGTGGCCTCTGGCTTCCTCCAGCTGGCATATGGTCCTGCAGTCTCGTaGATGAGCTTTCTTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SDYTLVMSVASGFLQLAYGPAVS*MSFLLP Trigger: TGGAAGAAGAAAGCTCATTCACGAGACTGCAGGACC...ATATGCCAGCTGGAGGAAGCCAGAGGCCACAGACATGACAAGTGTGTAATCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| CDS-3UTR TCA 90 bp | CTTGTAGACAGTGCTGAGGTTCTTGTAGGTGGCACATGTCTGCAGCCACAGGTCTTTGTTCTGCCTTCTTaGTGGCACAGAAGCCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LVDSAEVLVGGTCLQPQVFVLPS*WHRSLS Trigger: TGAAAGGCTTCTGTGCCATCAAGAAGGCAGAACAAA...GACCTGTGGCTGCAGACATGTGCCACCTACAAGAACCTCAGCACTGTCTACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022398.15 |
||
| CDS-3UTR GCA 90 bp | CAGCCACAGGTCCTGTTTCCTGTCCCACTTGTAGACAGTGCTGAGGTTCTTGTACAGGTTCCGATTCAATaGAAAGAACACAGGGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QPQVLFPVPLVDSAEVLVQVPIQ*KEHRAS Trigger: ACTGGCCCTGTGTTCTTTGCATTGAATCGGAACCTG...TACAAGAACCTCAGCACTGTCTACAAGTGGGACAGGAAACAGGACCTGTGGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022398.15 |
||
| CDS-3UTR GCA 90 bp | AGGGTGGATTCAGTGATTACACACTTGTCATGTCTGTGGCCTCTGGCTTCCTCCCAGGTTCCGATTCAATaGAAAGAACACAGGGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RVDSVITHLSCLWPLASSQVPIQ*KEHRAS Trigger: ACTGGCCCTGTGTTCTTTGCATTGAATCGGAACCTG...GGAGGAAGCCAGAGGCCACAGACATGACAAGTGTGTAATCACTGAATCCACCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| CDS-3UTR GCA 90 bp | GAGGTTCTTGTAGGTGGCACATGTCTGCAGCCACAGGTCCTGTTTCCTGTCCCATGGTCCTTCAGCTTTTaGATATCAAGCATCGCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: EVLVGGTCLQPQVLFPVPWSFSF*ISSIAL Trigger: TAAGGCGATGCTTGATATGCAAAAGCTGAAGGACCA...TGGGACAGGAAACAGGACCTGTGGCTGCAGACATGTGCCACCTACAAGAACCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022398.15 |
||
| CDS-3UTR CCA 90 bp | TGTCTGCAGCCACAGGTCCTGTTTCCTGTCCCACTTGTAGACAGTGCTGAGGTTAGAGGTAATTGCTTGTaGCAGGTCAATGGGTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: CLQPQVLFPVPLVDSAEVRGNCL*QVNGFK Trigger: CTTGAACCCATTGACCTGCCACAAGCAATTACCTCT...AACCTCAGCACTGTCTACAAGTGGGACAGGAAACAGGACCTGTGGCTGCAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022398.15 |
||
| CDS-3UTR CCA 90 bp | GATCCTGGAGTAAAGGTGGCTACAGAGCTACAGAGCAAGCAAATCAGCTCTCTCGGATCTTCTCTGTCTTaGTCCTCACCAGTGCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: DPGVKVATELQSKQISSLGSSLS*SSPVLV Trigger: CACAAGCACTGGTGAGGACCAAGACAGAGAAGATCC...GAGAGAGCTGATTTGCTTGCTCTGTAGCTCTGTAGCCACCTTTACTCCAGGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| CDS-3UTR TCA 90 bp | AATGACCTCTGTTTCAGCCTCTTAGTTTTAAGGCATAGACTTAAGGCATACATGTTGATCACCCGAGGGTaGGCCTTGGAGTGGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NDLCFSLLVLRHRLKAYMLITRG*ALEWPR Trigger: CCTGGGCCACTCCAAGGCTCACCCTCGGGTGATCAA...CATGTATGCCTTAAGTCTATGCCTTAAAACTAAGAGGCTGAAACAGAGGTCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| CDS-3UTR CCA 90 bp | TGTAGGTGGCACATGTCTGCAGCCACAGGTCCTGTTTCCTGTCCCACTTGTAGAGGTGTCTCTGTTTCTTaGCTTTGTAAAGGTGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: CRWHMSAATGPVSCPTCRGVSVS*LCKGVT Trigger: AGTCACACCTTTACAAAGCCAAGAAACAGAGACACC...TCTACAAGTGGGACAGGAAACAGGACCTGTGGCTGCAGACATGTGCCACCTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022398.15 |
||
| CDS-3UTR CCA 90 bp | GGCACATGTCTGCAGCCACAGGTCCTGTTTCCTGTCCCACTTGTAGACAGTGCTTTCTTCATGTTTCAGTaGGATGTCAAGATACATGGC | + |
|
Preference number: 4 (lower is better) Translates to: GTCLQPQVLFPVPLVDSAFFMFQ*DVKIHG Trigger: GCCATGTATCTTGACATCCCACTGAAACATGAAGAA...AGCACTGTCTACAAGTGGGACAGGAAACAGGACCTGTGGCTGCAGACATGTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022398.15 |
||
| CDS-3UTR CCA 90 bp | AGGGTGGATTCAGTGATTACACACTTGTCATGTCTGTGGCCTCTGGCTTCCTCCGGTGTCTCTGTTTCTTaGCTTTGTAAAGGTGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: RVDSVITHLSCLWPLASSGVSVS*LCKGVT Trigger: AGTCACACCTTTACAAAGCCAAGAAACAGAGACACC...GGAGGAAGCCAGAGGCCACAGACATGACAAGTGTGTAATCACTGAATCCACCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| CDS-3UTR CCA 90 bp | GTCCTGTTTCCTGTCCCACTTGTAGACAGTGCTGAGGTTCTTGCTCCTGGGGTAAAGAATTCTTCATCTTaGGGATTTCCTGGATCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VLFPVPLVDSAEVLAPGVKNSSS*GFPGSL Trigger: CAGAGATCCAGGAAATCCCCAAGATGAAGAATTCTT...TACCCCAGGAGCAAGAACCTCAGCACTGTCTACAAGTGGGACAGGAAACAGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022398.15 |
||
| CDS-3UTR TCA 90 bp | ACCCTGGGAATTAAAAGAAGCACAGGCCCACTACCTTCTGTCCTTGGAAAATGTCTGCAGTCTCGTGAATaGGCTTTCTTCTTCCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TLGIKRSTGPLPSVLGKCLQSRE*AFFFQV Trigger: AACCTGGAAGAAGAAAGCTCATTCACGAGACTGCAG...ACATTTTCCAAGGACAGAAGGTAGTGGGCCTGTGCTTCTTTTAATTCCCAGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| CDS-3UTR TCA 90 bp | CTCAGACTGTGTAGAAAGGGATCAAATTCCAGTTGTCTTGTGCCCTTGCTCAGCTTTGTTCTGCCTTCTTaGTGGCACAGAAGCCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LRLCRKGSNSSCLVPLLSFVLPS*WHRSLS Trigger: TGAAAGGCTTCTGTGCCATCAAGAAGGCAGAACAAA...GCTGAGCAAGGGCACAAGACAACTGGAATTTGATCCCTTTCTACACAGTCTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| CDS-3UTR GCA 90 bp | CTTGTAGACAGTGCTGAGGTTCTTGTAGGTGGCACATGTCTGCAGCCACAGGTCATTCTTCGGGGTGGATaGCTTTTGATAATACTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LVDSAEVLVGGTCLQPQVILRGG*LLIILV Trigger: AACAAGTATTATCAAAAGGCATCCACCCCGAAGAAT...GACCTGTGGCTGCAGACATGTGCCACCTACAAGAACCTCAGCACTGTCTACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022398.15 |
||
| CDS-3UTR GCA 90 bp | AGTGATTACACACTTGTCATGTCTGTGGCCTCTGGCTTCCTCCAGCTGGCATATTGGTCCTTCAGCTTTTaGATATCAAGCATCGCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: SDYTLVMSVASGFLQLAYWSFSF*ISSIAL Trigger: TAAGGCGATGCTTGATATGCAAAAGCTGAAGGACCA...ATATGCCAGCTGGAGGAAGCCAGAGGCCACAGACATGACAAGTGTGTAATCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| CDS-3UTR CCA 90 bp | CTTGGAAGTATGCCCATGTACCACATGCATGCAATTTCTACAGAGGTCAAAAGACAAGATACATGGCCCTaGATACTGCCGGGAGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGSMPMYHMHAISTEVKRQDTWP*ILPGVF Trigger: GAAGACTCCCGGCAGTATCCAGGGCCATGTATCTTG...TCTTTTGACCTCTGTAGAAATTGCATGCATGTGGTACATGGGCATACTTCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| CDS-3UTR CCA 90 bp | CTCAGACTGTGTAGAAAGGGATCAAATTCCAGTTGTCTTGTGCCCTTGCTCAGCAGAGGTAATTGCTTGTaGCAGGTCAATGGGTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LRLCRKGSNSSCLVPLLSRGNCL*QVNGFK Trigger: CTTGAACCCATTGACCTGCCACAAGCAATTACCTCT...GCTGAGCAAGGGCACAAGACAACTGGAATTTGATCCCTTTCTACACAGTCTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| CDS-3UTR CCA 90 bp | AGGGTGGATTCAGTGATTACACACTTGTCATGTCTGTGGCCTCTGGCTTCCTCCAAGAATTCTTCATCTTaGGGATTTCCTGGATCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RVDSVITHLSCLWPLASSKNSSS*GFPGSL Trigger: CAGAGATCCAGGAAATCCCCAAGATGAAGAATTCTT...GGAGGAAGCCAGAGGCCACAGACATGACAAGTGTGTAATCACTGAATCCACCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| CDS-3UTR GCA 90 bp | AGGGTGGATTCAGTGATTACACACTTGTCATGTCTGTGGCCTCTGGCTTCCTCCATTCTTCGGGGTGGATaGCTTTTGATAATACTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RVDSVITHLSCLWPLASSILRGG*LLIILV Trigger: AACAAGTATTATCAAAAGGCATCCACCCCGAAGAAT...GGAGGAAGCCAGAGGCCACAGACATGACAAGTGTGTAATCACTGAATCCACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| CDS-3UTR CCA 90 bp | AGTGATTACACACTTGTCATGTCTGTGGCCTCTGGCTTCCTCCAGCTGGCATATTTCTTCATGTTTCAGTaGGATGTCAAGATACATGGC | + |
|
Preference number: 4 (lower is better) Translates to: SDYTLVMSVASGFLQLAYFFMFQ*DVKIHG Trigger: GCCATGTATCTTGACATCCCACTGAAACATGAAGAA...ATATGCCAGCTGGAGGAAGCCAGAGGCCACAGACATGACAAGTGTGTAATCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| 3UTR CAA 72 bp | TGTAGAAAGGGATCAAATTCCAGTTGTCTTGTGCCCTaGCTCAGCCTCTTTGTGACTCTAGTCTTAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CRKGSNSSCLVP*LSLFVTLVLAA Trigger: AGCTGCTAAGACTAGAGTCACAAAGAGGCTGAGCAAGGGCACAAGACAACTGGAATTTGATCCCTTTCTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| 3UTR CAA 72 bp | ATGTCTGTGGCCTCTGGCTTCCTCCAGCTGGCATATTaGCTGTTAGACACACTGAACTGGTTTAAAGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: MSVASGFLQLAY*LLDTLNWFKGK Trigger: TTTTCCTTTAAACCAGTTCAGTGTGTCTAACAGCAAATATGCCAGCTGGAGGAAGCCAGAGGCCACAGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| CDS-3UTR TCA 90 bp | TGTGACAGTCCAAGAATTCTTCATCTTGGGGATTTCCTGGATCTCTGTTTATGTGGTCCTGCAGTCTCGTaGATGAGCTTTCTTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CDSPRILHLGDFLDLCLCGPAVS*MSFLLP Trigger: TGGAAGAAGAAAGCTCATTCACGAGACTGCAGGACC...ACATAAACAGAGATCCAGGAAATCCCCAAGATGAAGAATTCTTGGACTGTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148109.2 |
||
| 3UTR CAA 72 bp | ATTTTCCTGCTTTGTGTTGGACTTTGTTCTGCCTTCTaGATGGCACAGAAGCCTTTCAGAGGTAATTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IFLLCVGLCSAF*MAQKPFRGNCL Trigger: CAAGCAATTACCTCTGAAAGGCTTCTGTGCCATCAAGAAGGCAGAACAAAGTCCAACACAAAGCAGGAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148109.2 |
||
| 3UTR CAA 72 bp | CTGGGCGATTTTATTGCCATTATGGTCCTTCAGCTTTaGCATATCAAGCATCGCCTTACTCAGAAGACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LGDFIAIMVLQL*HIKHRLTQKTL Trigger: AAGAGTCTTCTGAGTAAGGCGATGCTTGATATGCAAAAGCTGAAGGACCATAATGGCAATAAAATCGCCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148109.2 |
||
| 3UTR CAA 72 bp | CACAGTGTTATTGAAAGTCTCCAGGATGGACACCTTTaGGTACCTATTCCCTTGTGTGGACTCTTTTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: HSVIESLQDGHL*VPIPLCGLFSL Trigger: CAATGAAAAGAGTCCACACAAGGGAATAGGTACCAAAAGGTGTCCATCCTGGAGACTTTCAATAACACTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| 3UTR CAA 72 bp | TGGTCACGAATTCATGATTTTTCTGACTCAGCCTCCTaGGTACTGGAATTACAGGCATGTTACTACCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: WSRIHDFSDSAS*VLELQACYYHA Trigger: AGCATGGTAGTAACATGCCTGTAATTCCAGTACCAAGGAGGCTGAGTCAGAAAAATCATGAATTCGTGACCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| CDS-3UTR GCA 90 bp | TTGTTCACGGAGCCATGTTTCCATTTTGCCAATTTTCCGGACATAATAGTCATTCAGGTTCCGATTCAATaGAAAGAACACAGGGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LFTEPCFHFANFPDIIVIQVPIQ*KEHRAS Trigger: ACTGGCCCTGTGTTCTTTGCATTGAATCGGAACCTG...AATGACTATTATGTCCGGAAAATTGGCAAAATGGAAACATGGCTCCGTGAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148109.2 |
||
| CDS-3UTR CCA 90 bp | CTTACCCTTTGGAGAAGGCTGGTGGTAAAACAATCTAGGATTGATTATTTTTCTATAGCCGTTGCTCCTTaGCTTGCTCTGGGCGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: LTLWRRLVVKQSRIDYFSIAVAP*LALGDF Trigger: AAAATCGCCCAGAGCAAGCCAAGGAGCAACGGCTAT...AGAAAAATAATCAATCCTAGATTGTTTTACCACCAGCCTTCTCCAAAGGGTAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| CDS-3UTR CCA 90 bp | ACGTGTCAGGTGTTTAGTCTTCTCACAGACTGGTTTGAAGAGACTGAGTGTGAATTTCCTGCTTTGTGTTaGACTTTGTTCTGCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TCQVFSLLTDWFEETECEFPALC*TLFCLL Trigger: AAGAAGGCAGAACAAAGTCCAACACAAAGCAGGAAA...TTCACACTCAGTCTCTTCAAACCAGTCTGTGAGAAGACTAAACACCTGACACGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| CDS-3UTR GCA 90 bp | CTTACCCTTTGGAGAAGGCTGGTGGTAAAACAATCTAGGATTGATTATTTTTCTCCTTTCAGAGGTAATTaGTTGTGGCAGGTCAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: LTLWRRLVVKQSRIDYFSPFRGN*LWQVNG Trigger: CCCATTGACCTGCCACAAGCAATTACCTCTGAAAGG...AGAAAAATAATCAATCCTAGATTGTTTTACCACCAGCCTTCTCCAAAGGGTAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| CDS-3UTR CCA 90 bp | GCCATGTTTCCATTTTGCCAATTTTCCGGACATAATAGTCATTCTCTGTGTGACGGTGTCTCTGTTTCTTaGCTTTGTAAAGGTGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: AMFPFCQFSGHNSHSLCDGVSVS*LCKGVT Trigger: AGTCACACCTTTACAAAGCCAAGAAACAGAGACACC...GTCACACAGAGAATGACTATTATGTCCGGAAAATTGGCAAAATGGAAACATGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148109.2 |
||
| 3UTR CAA 72 bp | AACTACATGTTTCTAAAGGCAAACCAGTGCCAAGTTTaGAGATGCACAGTGTTATTGAAAGTCTCCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: NYMFLKANQCQV*RCTVLLKVSRM Trigger: CATCCTGGAGACTTTCAATAACACTGTGCATCTCAAAACTTGGCACTGGTTTGCCTTTAGAAACATGTAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| 3UTR CAA 72 bp | AAACATCTAATAATGAACTTGGTGCCAGATGTCACATaGGGGAAGGCAGTTATCAATAACATAGGGAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KHLIMNLVPDVT*GKAVINNIGRG Trigger: ACCTCTCCCTATGTTATTGATAACTGCCTTCCCCAATGTGACATCTGGCACCAAGTTCATTATTAGATGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| 3UTR CAA 72 bp | GTCATTCTCTGTGTGACAGTCCAAGAATTCTTCATCTaGGGGATTTCCTGGATCTCTGTTTATGTTTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: VILCVTVQEFFI*GISWISVYVFI Trigger: AATGAAAACATAAACAGAGATCCAGGAAATCCCCAAGATGAAGAATTCTTGGACTGTCACACAGAGAATGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148109.2 |
||
| 3UTR CAA 72 bp | ATTCTCATCTATTTTTATAGGATTATTGATGATCAGTaGATTGAGACAGGGTTTTGTTGTGTAGCCCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ILIYFYRIIDDQ*IETGFCCVAQA Trigger: AGCCTGGGCTACACAACAAAACCCTGTCTCAATCAACTGATCATCAATAATCCTATAAAAATAGATGAGAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| 3UTR CAA 72 bp | GTTGGGAAACTTGAATTGCTTAAAGGCATTTGTAGATaGTGTGAAGCAGTCAGAATTTTGAGCTTTAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: VGKLELLKGICR*CEAVRILSFNS Trigger: GGAATTAAAGCTCAAAATTCTGACTGCTTCACACAATCTACAAATGCCTTTAAGCAATTCAAGTTTCCCAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| CDS-3UTR CAA 90 bp | CCACAGGTCCTGTTTCCTGTCCCACTTGTAGACAGTGCTGAGGTTCTTGTAGGTCTGTCCCCGGGCTTCTaGTTCACGGAGCCATGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PQVLFPVPLVDSAEVLVGLSPGF*FTEPCF Trigger: GAAACATGGCTCCGTGAACAAGAAGCCCGGGGACAG...ACCTACAAGAACCTCAGCACTGTCTACAAGTGGGACAGGAAACAGGACCTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022398.15 |
||
| CDS-3UTR CAA 90 bp | GGTGGCACATGTCTGCAGCCACAGGTCCTGTTTCCTGTCCCACTTGTAGACAGTGGGATCTTCTCTGTCTaGGTCCTCACCAGTGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GGTCLQPQVLFPVPLVDSGIFSV*VLTSAC Trigger: ACAAGCACTGGTGAGGACCAAGACAGAGAAGATCCC...ACTGTCTACAAGTGGGACAGGAAACAGGACCTGTGGCTGCAGACATGTGCCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022398.15 |
||
| CDS-3UTR CAA 90 bp | GCCCCTGGGTCCAAGTTTCTCTGTGTAGCCCTGGTTGCCCTCAACTCATGGAGATTCAGAGGTAATTGCTaGTGGCAGGTCAATGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: APGSKFLCVALVALNSWRFRGNC*WQVNGF Trigger: GAACCCATTGACCTGCCACAAGCAATTACCTCTGAA...TCTCCATGAGTTGAGGGCAACCAGGGCTACACAGAGAAACTTGGACCCAGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
||
| CDS-3UTR CAA 90 bp | AGTGATTACACACTTGTCATGTCTGTGGCCTCTGGCTTCCTCCAGCTGGCATATCTGTCCCCGGGCTTCTaGTTCACGGAGCCATGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SDYTLVMSVASGFLQLAYLSPGF*FTEPCF Trigger: GAAACATGGCTCCGTGAACAAGAAGCCCGGGGACAG...ATATGCCAGCTGGAGGAAGCCAGAGGCCACAGACATGACAAGTGTGTAATCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
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| CDS-3UTR CAA 90 bp | GTCCTGTTTCCTGTCCCACTTGTAGACAGTGCTGAGGTTCTTGCTCCTGGGGTAGGTCCTCACCAGTGCTaGTGGTCTCCTCTCATCTTT | + |
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Preference number: 5 (lower is better) Translates to: VLFPVPLVDSAEVLAPGVGPHQC*WSPLIF Trigger: AAAGATGAGAGGAGACCACAAGCACTGGTGAGGACC...TACCCCAGGAGCAAGAACCTCAGCACTGTCTACAAGTGGGACAGGAAACAGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022398.15 |
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| CDS TCA 90 bp | TCTGTTTCTTGGCTTTGTAAAGGTGTGACTTTGATCACCCGAGGGTaGGCCTTGGAGTGGCCCAGGCCCATGTTCCTTGAAGACATTGAG | + |
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Preference number: 5 (lower is better) Translates to: SVSWLCKGVTLITRG*ALEWPRPMFLEDIE Trigger: CTCAATGTCTTCAAGGAACATGGGCCTGGGCCACTCCAAGGCTCACCCTCGGGTGATCAAAGTCACACCTTTACAAAGCCAAGAAACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022398.15 |
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| CDS-3UTR CAA 90 bp | GTAGACAGTGCTGAGGTTCTTGTAGGTGGCACATGTCTGCAGCCACAGGTCCTGCCAGGCCCATGTTCCTaGAAGACATTGAGAAGAAAA | + |
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Preference number: 5 (lower is better) Translates to: VDSAEVLVGGTCLQPQVLPGPCS*KTLRRK Trigger: TTTTCTTCTCAATGTCTTCAAGGAACATGGGCCTGG...CAGGACCTGTGGCTGCAGACATGTGCCACCTACAAGAACCTCAGCACTGTCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022398.15 |
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| CDS-3UTR CAA 90 bp | TGTCTGCAGCCACAGGTCCTGTTTCCTGTCCCACTTGTAGACAGTGCTGAGGTTTTCAGAGGTAATTGCTaGTGGCAGGTCAATGGGTTC | + |
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Preference number: 5 (lower is better) Translates to: CLQPQVLFPVPLVDSAEVFRGNC*WQVNGF Trigger: GAACCCATTGACCTGCCACAAGCAATTACCTCTGAA...AACCTCAGCACTGTCTACAAGTGGGACAGGAAACAGGACCTGTGGCTGCAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022398.15 |
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| CDS-3UTR CAA 90 bp | CTTGTAGGTGGCACATGTCTGCAGCCACAGGTCCTGTTTCCTGTCCCACTTGTACCTTTGTGTTGGACTTaGTTCTGCCTTCTTGATGGC | + |
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Preference number: 5 (lower is better) Translates to: LVGGTCLQPQVLFPVPLVPLCWT*FCLLDG Trigger: GCCATCAAGAAGGCAGAACAAAGTCCAACACAAAGG...TACAAGTGGGACAGGAAACAGGACCTGTGGCTGCAGACATGTGCCACCTACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022398.15 |
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| CDS-3UTR CAA 90 bp | GGCACATGTCTGCAGCCACAGGTCCTGTTTCCTGTCCCACTTGTAGACAGTGCTCTCCATTTGGGCCTCTaGTCTTTTATGGTTCATCTC | + |
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Preference number: 5 (lower is better) Translates to: GTCLQPQVLFPVPLVDSALHLGL*SFMVHL Trigger: GAGATGAACCATAAAAGACAAGAGGCCCAAATGGAG...AGCACTGTCTACAAGTGGGACAGGAAACAGGACCTGTGGCTGCAGACATGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022398.15 |
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| CDS-3UTR CAA 90 bp | GGCACATGTCTGCAGCCACAGGTCCTGTTTCCTGTCCCACTTGTAGACAGGGCTCAAGAATTCTTCATCTaGGGGATTTCCTGGATCTCT | + |
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Preference number: 5 (lower is better) Translates to: GTCLQPQVLFPVPLVDRAQEFFI*GISWIS Trigger: AGAGATCCAGGAAATCCCCAAGATGAAGAATTCTTG...AGCCCTGTCTACAAGTGGGACAGGAAACAGGACCTGTGGCTGCAGACATGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022398.15 |
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| CDS-3UTR CAA 90 bp | CTGCAGCCACAGGTCCTGTTTCCTGTCCCACTTGTAGACAGTGCTGAGGTTCTTCTTCCTCAACTCCATTaGGGCCTCTTGTCTTTTATG | + |
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Preference number: 5 (lower is better) Translates to: LQPQVLFPVPLVDSAEVLLPQLH*GLLSFM Trigger: CATAAAAGACAAGAGGCCCAAATGGAGTTGAGGAAG...AAGAACCTCAGCACTGTCTACAAGTGGGACAGGAAACAGGACCTGTGGCTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022398.15 |
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| CDS CCA 90 bp | ATCATAAAGAGGGATCTTCTCTGTCTTGGTCCTCACCAGTGCTTGTaGTCTCCTCTCATCTTTCTCAAGCTCATCAGAGTCGGAGCTGGA | + |
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Preference number: 5 (lower is better) Translates to: IIKRDLLCLGPHQCL*SPLIFLKLIRVGAG Trigger: TCCAGCTCCGACTCTGATGAGCTTGAGAAAGATGAGAGGAGACCACAAGCACTGGTGAGGACCAAGACAGAGAAGATCCCTCTTTATGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022398.15 ENSMUST00000228936.2 |
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| CDS-3UTR CAA 90 bp | CTGCAGCCACAGGTCCTGTTTCCTGTCCCACTTGTAGACAGTGCTGAGGTTCTTCGGGGTGGATGCCTTTaGATAATACTTGTTTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: LQPQVLFPVPLVDSAEVLRGGCL*IILVSS Trigger: TGAAGAAACAAGTATTATCAAAAGGCATCCACCCCG...AAGAACCTCAGCACTGTCTACAAGTGGGACAGGAAACAGGACCTGTGGCTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022398.15 |
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| CDS TCA 90 bp | GTGGTAGCTGTCCTTCTCGAGTTCGATTCTGGTCCTGCAGTCTCGTaGATGAGCTTTCTTCTTCCAGGTTCCGATTCAATGCAAAGAACA | + |
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Preference number: 5 (lower is better) Translates to: VVAVLLEFDSGPAVS*MSFLLPGSDSMQRT Trigger: TGTTCTTTGCATTGAATCGGAACCTGGAAGAAGAAAGCTCATTCACGAGACTGCAGGACCAGAATCGAACTCGAGAAGGACAGCTACCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022398.15 ENSMUST00000130853.2 ENSMUST00000148109.2 ENSMUST00000227113.2 ENSMUST00000228936.2 |
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| CDS CCA 90 bp | TACTTGTTTCTTCATGTTTCAGTGGGATGTCAAGATACATGGCCCTaGATACTGCCGGGAGTCTTCCATACCAAGTTTCTCGAAGCGGTG | + |
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Preference number: 5 (lower is better) Translates to: YLFLHVSVGCQDTWP*ILPGVFHTKFLEAV Trigger: CACCGCTTCGAGAAACTTGGTATGGAAGACTCCCGGCAGTATCCAGGGCCATGTATCTTGACATCCCACTGAAACATGAAGAAACAAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022398.15 ENSMUST00000130853.2 ENSMUST00000227113.2 ENSMUST00000228936.2 |
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| CDS CCA 90 bp | TCGGGGTGGATGCCTTTTGATAATACTTGTTTCTTCATGTTTCAGTaGGATGTCAAGATACATGGCCCTGGATACTGCCGGGAGTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: SGWMPFDNTCFFMFQ*DVKIHGPGYCRESS Trigger: GGAAGACTCCCGGCAGTATCCAGGGCCATGTATCTTGACATCCCACTGAAACATGAAGAAACAAGTATTATCAAAAGGCATCCACCCCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022398.15 ENSMUST00000130853.2 ENSMUST00000227113.2 ENSMUST00000228936.2 |
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| CDS-3UTR CAA 90 bp | ACCTTTTGGTACCTATTCCCTTGTGTGGACTCTTTTCATTGGCTAGCATTTGGCGGTCCTCACCAGTGCTaGTGGTCTCCTCTCATCTTT | + |
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Preference number: 5 (lower is better) Translates to: TFWYLFPCVDSFHWLAFGGPHQC*WSPLIF Trigger: AAAGATGAGAGGAGACCACAAGCACTGGTGAGGACC...GCCAAATGCTAGCCAATGAAAAGAGTCCACACAAGGGAATAGGTACCAAAAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
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| CDS GCA 90 bp | AAAGTCATCATAAAGAGGGATCTTCTCTGTCTTGGTCCTCACCAGTaGTTGTGGTCTCCTCTCATCTTTCTCAAGCTCATCAGAGTCGGA | + |
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Preference number: 5 (lower is better) Translates to: KVIIKRDLLCLGPHQ*LWSPLIFLKLIRVG Trigger: TCCGACTCTGATGAGCTTGAGAAAGATGAGAGGAGACCACAAGCACTGGTGAGGACCAAGACAGAGAAGATCCCTCTTTATGATGACTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022398.15 ENSMUST00000228936.2 |
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| CDS-3UTR CAA 90 bp | TGTCAGGTGTTTAGTCTTCTCACAGACTGGTTTGAAGAGACTGAGTGTGAAATCGGGATCTTCTCTGTCTaGGTCCTCACCAGTGCTTGT | + |
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Preference number: 5 (lower is better) Translates to: CQVFSLLTDWFEETECEIGIFSV*VLTSAC Trigger: ACAAGCACTGGTGAGGACCAAGACAGAGAAGATCCC...GATTTCACACTCAGTCTCTTCAAACCAGTCTGTGAGAAGACTAAACACCTGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
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| CDS-3UTR CAA 90 bp | ACGTGTCAGGTGTTTAGTCTTCTCACAGACTGGTTTGAAGAGACTGAGTGTGAAGCTTTGTGTTGGACTTaGTTCTGCCTTCTTGATGGC | + |
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Preference number: 5 (lower is better) Translates to: TCQVFSLLTDWFEETECEALCWT*FCLLDG Trigger: GCCATCAAGAAGGCAGAACAAAGTCCAACACAAAGC...TTCACACTCAGTCTCTTCAAACCAGTCTGTGAGAAGACTAAACACCTGACACGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
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| CDS-3UTR CAA 90 bp | CCATTGCCCAACTACATGTTTCTAAAGGCAAACCAGTGCCAAGTTTTGAGATGCCGGGGTGGATGCCTTTaGATAATACTTGTTTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: PLPNYMFLKANQCQVLRCRGGCL*IILVSS Trigger: TGAAGAAACAAGTATTATCAAAAGGCATCCACCCCG...GCATCTCAAAACTTGGCACTGGTTTGCCTTTAGAAACATGTAGTTGGGCAATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
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| CDS-3UTR CAA 90 bp | TGTCAGGTGTTTAGTCTTCTCACAGACTGGTTTGAAGAGACTGAGTGTGAAATCCTTCCTCAACTCCATTaGGGCCTCTTGTCTTTTATG | + |
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Preference number: 5 (lower is better) Translates to: CQVFSLLTDWFEETECEILPQLH*GLLSFM Trigger: CATAAAAGACAAGAGGCCCAAATGGAGTTGAGGAAG...GATTTCACACTCAGTCTCTTCAAACCAGTCTGTGAGAAGACTAAACACCTGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
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| CDS-3UTR CAA 90 bp | TGTCAGGTGTTTAGTCTTCTCACAGACTGGTTTGAAGAGACTGAGTGTGAAATCCAAGAATTCTTCATCTaGGGGATTTCCTGGATCTCT | + |
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Preference number: 5 (lower is better) Translates to: CQVFSLLTDWFEETECEIQEFFI*GISWIS Trigger: AGAGATCCAGGAAATCCCCAAGATGAAGAATTCTTG...GATTTCACACTCAGTCTCTTCAAACCAGTCTGTGAGAAGACTAAACACCTGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
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| CDS-3UTR CAA 90 bp | TGTCAGGTGTTTAGTCTTCTCACAGACTGGTTTGAAGAGACTGAGTGTGAAATCTTTTCCTGCTTTGTGTaGGACTTTGTTCTGCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: CQVFSLLTDWFEETECEIFSCFV*DFVLPS Trigger: AGAAGGCAGAACAAAGTCCAACACAAAGCAGGAAAA...GATTTCACACTCAGTCTCTTCAAACCAGTCTGTGAGAAGACTAAACACCTGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
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| CDS-3UTR CAA 90 bp | TGTCAGGTGTTTAGTCTTCTCACAGACTGGTTTGAAGAGACTGAGTGTGAAATCTCTCATTTTCCTGCTTaGTGTTGGACTTTGTTCTGC | + |
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Preference number: 5 (lower is better) Translates to: CQVFSLLTDWFEETECEISHFPA*CWTLFC Trigger: GCAGAACAAAGTCCAACACAAAGCAGGAAAATGAGA...GATTTCACACTCAGTCTCTTCAAACCAGTCTGTGAGAAGACTAAACACCTGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
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| CDS-3UTR CAA 90 bp | AATGACCTCTGTTTCAGCCTCTTAGTTTTAAGGCATAGACTTAAGGCATACATGCTCCATTTGGGCCTCTaGTCTTTTATGGTTCATCTC | + |
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Preference number: 5 (lower is better) Translates to: NDLCFSLLVLRHRLKAYMLHLGL*SFMVHL Trigger: GAGATGAACCATAAAAGACAAGAGGCCCAAATGGAG...CATGTATGCCTTAAGTCTATGCCTTAAAACTAAGAGGCTGAAACAGAGGTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228936.2 |
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| CDS TCA 72 bp | TGGCTTTGTAAAGGTGTGACTTTGATCACCCGAGGGTaGGCCTTGGAGTGGCCCAGGCCCATGTTCCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: WLCKGVTLITRG*ALEWPRPMFLE Trigger: TTCAAGGAACATGGGCCTGGGCCACTCCAAGGCTCACCCTCGGGTGATCAAAGTCACACCTTTACAAAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022398.15 |
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| CDS GCA 72 bp | TTTCAGTGGGATGTCAAGATACATGGCCCTGGATACTaGCGGGAGTCTTCCATACCAAGTTTCTCGAAGCGG | + |
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Preference number: 6 (lower is better) Translates to: FQWDVKIHGPGY*RESSIPSFSKR Trigger: CCGCTTCGAGAAACTTGGTATGGAAGACTCCCGGCAGTATCCAGGGCCATGTATCTTGACATCCCACTGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022398.15 ENSMUST00000130853.2 ENSMUST00000227113.2 ENSMUST00000228936.2 |
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| CDS CAA 90 bp | GTCATCATAAAGAGGGATCTTCTCTGTCTTGGTCCTCACCAGTGCTaGTGGTCTCCTCTCATCTTTCTCAAGCTCATCAGAGTCGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: VIIKRDLLCLGPHQC*WSPLIFLKLIRVGA Trigger: AGCTCCGACTCTGATGAGCTTGAGAAAGATGAGAGGAGACCACAAGCACTGGTGAGGACCAAGACAGAGAAGATCCCTCTTTATGATGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022398.15 ENSMUST00000228936.2 |
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| CDS CCA 72 bp | TTGTTTCTTCATGTTTCAGTGGGATGTCAAGATACATaGCCCTGGATACTGCCGGGAGTCTTCCATACCAAG | + |
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Preference number: 6 (lower is better) Translates to: LFLHVSVGCQDT*PWILPGVFHTK Trigger: CTTGGTATGGAAGACTCCCGGCAGTATCCAGGGCCATGTATCTTGACATCCCACTGAAACATGAAGAAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022398.15 ENSMUST00000130853.2 ENSMUST00000227113.2 ENSMUST00000228936.2 |
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