Pregenerated sensors for CBFA2T3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006362Ensembl transcript IDs: ENSMUST00000006525.14, ENSMUST00000064674.13, ENSMUST00000127984.9, ENSMUST00000134045.2
Found 418 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCTGCGGCCTTGGAGGGCTGCGGCCGCGGGAACCTTCCAGGGAATaGGATCTACCCCAGCCTTCCGAGCAAGGGTTGCTGTCAGGCTCC | + |
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Preference number: 1 (lower is better) Translates to: LCGLGGLRPREPSRE*DLPQPSEQGLLSGS Trigger: GGAGCCTGACAGCAACCCTTGCTCGGAAGGCTGGGGTAGATCTCATTCCCTGGAAGGTTCCCGCGGCCGCAGCCCTCCAAGGCCGCAGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR CCA 90 bp | CGGACACAGAGAGACGGACACAGAGGGGACAGACAGCGGCGGAGCTaGCCACACTCCTGCTGGTGCCACTGTCTGACGCTCTGCGATGCT | + |
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Preference number: 1 (lower is better) Translates to: RTQRDGHRGDRQRRS*PHSCWCHCLTLCDA Trigger: AGCATCGCAGAGCGTCAGACAGTGGCACCAGCAGGAGTGTGGCCAGCTCCGCCGCTGTCTGTCCCCTCTGTGTCCGTCTCTCTGTGTCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
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| 3UTR TCA 90 bp | GAGAAGGGCGGGCAGGCAGGAGGCCGCCTTGTGTCCTGGCTTCTCTaGAACCCACAAGAATACATCTCTGCGGCCTTGGAGGGCTGCGGC | + |
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Preference number: 1 (lower is better) Translates to: EKGGQAGGRLVSWLL*NPQEYISAALEGCG Trigger: GCCGCAGCCCTCCAAGGCCGCAGAGATGTATTCTTGTGGGTTTCAGAGAAGCCAGGACACAAGGCGGCCTCCTGCCTGCCCGCCCTTCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR CCA 90 bp | AGTCGAGCGGGCGAAGGGCAGGGTGGGCAGGGGCTAGAGTGTAGATaGGCAAGCATCACCGTCACCCCCAGGACTGGAGACCAACATTGG | + |
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Preference number: 1 (lower is better) Translates to: SRAGEGQGGQGLECR*ASITVTPRTGDQHW Trigger: CCAATGTTGGTCTCCAGTCCTGGGGGTGACGGTGATGCTTGCCCATCTACACTCTAGCCCCTGCCCACCCTGCCCTTCGCCCGCTCGACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR CCA 90 bp | GTGGCTCCCCAGGCAGGCTGTGTGATGCTATGCTCACCCCAGGTATaGTGTGAGCTGAGGGCTCCTGGGCCTCTTGTCTGGGTTGGGAGC | + |
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Preference number: 1 (lower is better) Translates to: VAPQAGCVMLCSPQV*CELRAPGPLVWVGS Trigger: GCTCCCAACCCAGACAAGAGGCCCAGGAGCCCTCAGCTCACACCATACCTGGGGTGAGCATAGCATCACACAGCCTGCCTGGGGAGCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR TCA 90 bp | TCCCCAGGCAGGCTGTGTGATGCTATGCTCACCCCAGGTATGGTGTaGGCTGAGGGCTCCTGGGCCTCTTGTCTGGGTTGGGAGCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: SPGRLCDAMLTPGMV*AEGSWASCLGWEQE Trigger: CTCCTGCTCCCAACCCAGACAAGAGGCCCAGGAGCCCTCAGCTCACACCATACCTGGGGTGAGCATAGCATCACACAGCCTGCCTGGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR GCA 90 bp | CGACGGGAGGCAGGTCTCGCTCTACCAGCACACAGACTCAGTGTTTaGAGGCAGACGCTCAGGAGGACTGGTCCACTAGAGAAGGGCGGG | + |
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Preference number: 1 (lower is better) Translates to: RREAGLALPAHRLSV*RQTLRRTGPLEKGG Trigger: CCCGCCCTTCTCTAGTGGACCAGTCCTCCTGAGCGTCTGCCTGCAAACACTGAGTCTGTGTGCTGGTAGAGCGAGACCTGCCTCCCGTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR CCA 90 bp | ACCAGCACACAGACTCAGTGTTTGCAGGCAGACGCTCAGGAGGACTaGTCCACTAGAGAAGGGCGGGCAGGCAGGAGGCCGCCTTGTGTC | + |
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Preference number: 1 (lower is better) Translates to: TSTQTQCLQADAQED*STREGRAGRRPPCV Trigger: GACACAAGGCGGCCTCCTGCCTGCCCGCCCTTCTCTAGTGGACCAGTCCTCCTGAGCGTCTGCCTGCAAACACTGAGTCTGTGTGCTGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR CCA 90 bp | GGTGCTCCCCTGGGGGCTGGCTCCTCTCACTTGTCAGGCAGTGGGTaGGACCTGAGCTGTGGTGTCATTCAGCCAGTTCCTATCCAGCTG | + |
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Preference number: 1 (lower is better) Translates to: GAPLGAGSSHLSGSG*DLSCGVIQPVPIQL Trigger: CAGCTGGATAGGAACTGGCTGAATGACACCACAGCTCAGGTCCCACCCACTGCCTGACAAGTGAGAGGAGCCAGCCCCCAGGGGAGCACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR GCA 90 bp | GAGCAAGGCTCTGTGAGAGCCACATCGCCTAGGGGGTTTGGTTCATaGTTGGCTGTGGTTCCCAGGAGGCAGGGCCTGGGTCCATGGTGT | + |
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Preference number: 1 (lower is better) Translates to: EQGSVRATSPRGFGS*LAVVPRRQGLGPWC Trigger: ACACCATGGACCCAGGCCCTGCCTCCTGGGAACCACAGCCAAGCATGAACCAAACCCCCTAGGCGATGTGGCTCTCACAGAGCCTTGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR CCA 90 bp | TCTGGGTGCTCCCCTGGGGGCTGGCTCCTCTCACTTGTCAGGCAGTaGGTGGGACCTGAGCTGTGGTGTCATTCAGCCAGTTCCTATCCA | + |
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Preference number: 1 (lower is better) Translates to: SGCSPGGWLLSLVRQ*VGPELWCHSASSYP Trigger: TGGATAGGAACTGGCTGAATGACACCACAGCTCAGGTCCCACCCACTGCCTGACAAGTGAGAGGAGCCAGCCCCCAGGGGAGCACCCAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR TCA 90 bp | CAGGGCTGGGACACACAGGACTTGTGCCAAGAAGCCATAAGGTCATaGGATGGGATCTGGGCTGGGCCTTGGGGGTTGGAGAGCTCTGCC | + |
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Preference number: 1 (lower is better) Translates to: QGWDTQDLCQEAIRS*DGIWAGPWGLESSA Trigger: GGCAGAGCTCTCCAACCCCCAAGGCCCAGCCCAGATCCCATCTCATGACCTTATGGCTTCTTGGCACAAGTCCTGTGTGTCCCAGCCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR CCA 90 bp | TGCTCACCACCCCATCACCCAGAGCTCTTTCCTACCAGTGGTCACTaGCCTGCCCTTCTGGAAGGGCCAAGGTTGCTGCATGCAGTGGAG | + |
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Preference number: 1 (lower is better) Translates to: CSPPHHPELFPTSGH*PALLEGPRLLHAVE Trigger: CTCCACTGCATGCAGCAACCTTGGCCCTTCCAGAAGGGCAGGCCAGTGACCACTGGTAGGAAAGAGCTCTGGGTGATGGGGTGGTGAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR TCA 90 bp | AGGGCTCCTGGGCCTCTTGTCTGGGTTGGGAGCAGGAGGATGTGCTaGGCAGGCCATGCTTTGACTCAGATGCTGCATTCCTGTCTCCCA | + |
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Preference number: 1 (lower is better) Translates to: RAPGPLVWVGSRRMC*AGHALTQMLHSCLP Trigger: TGGGAGACAGGAATGCAGCATCTGAGTCAAAGCATGGCCTGCTCAGCACATCCTCCTGCTCCCAACCCAGACAAGAGGCCCAGGAGCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR GCA 90 bp | GAGCCCAGCTCGCCTCAGGCTTCTCTCCCTATCTTCTCTTCCTCTTaGCAGCATGATGGGTACCCAGGGGTCTCTGCCCAGCCTCATTTC | + |
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Preference number: 1 (lower is better) Translates to: EPSSPQASLPIFSSS*QHDGYPGVSAQPHF Trigger: GAAATGAGGCTGGGCAGAGACCCCTGGGTACCCATCATGCTGGCAAGAGGAAGAGAAGATAGGGAGAGAAGCCTGAGGCGAGCTGGGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR CCA 90 bp | GGGCTTCTGGATGCGGTGCTGAGGGTCACGTGGCCTTGCTGCCGATaGCTCTGCCCAGCAAGGATGCTGCCTACTAGTCAAAAAGGAACA | + |
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Preference number: 1 (lower is better) Translates to: GLLDAVLRVTWPCCR*LCPARMLPTSQKGT Trigger: TGTTCCTTTTTGACTAGTAGGCAGCATCCTTGCTGGGCAGAGCCATCGGCAGCAAGGCCACGTGACCCTCAGCACCGCATCCAGAAGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
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| 3UTR GCA 90 bp | GTACCGCATGGGGTACAGTTGGGAATGGAATCCAGTGATGCTCCTTaGGACGGGAGGCAGGTCTCGCTCTACCAGCACACAGACTCAGTG | + |
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Preference number: 1 (lower is better) Translates to: VPHGVQLGMESSDAP*DGRQVSLYQHTDSV Trigger: CACTGAGTCTGTGTGCTGGTAGAGCGAGACCTGCCTCCCGTCGCAAGGAGCATCACTGGATTCCATTCCCAACTGTACCCCATGCGGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR GCA 90 bp | GCCTCTTGTCTGGGTTGGGAGCAGGAGGATGTGCTGAGCAGGCCATaGTTTGACTCAGATGCTGCATTCCTGTCTCCCAGTCTGGCTTGG | + |
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Preference number: 1 (lower is better) Translates to: ASCLGWEQEDVLSRP*FDSDAAFLSPSLAW Trigger: CCAAGCCAGACTGGGAGACAGGAATGCAGCATCTGAGTCAAAGCATGGCCTGCTCAGCACATCCTCCTGCTCCCAACCCAGACAAGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR CCA 90 bp | TGTCCTGGCTTCTCTGAAACCCACAAGAATACATCTCTGCGGCCTTaGAGGGCTGCGGCCGCGGGAACCTTCCAGGGAATGAGATCTACC | + |
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Preference number: 1 (lower is better) Translates to: CPGFSETHKNTSLRP*RAAAAGTFQGMRST Trigger: GGTAGATCTCATTCCCTGGAAGGTTCCCGCGGCCGCAGCCCTCCAAGGCCGCAGAGATGTATTCTTGTGGGTTTCAGAGAAGCCAGGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR TCA 90 bp | CCAGCTGTGACCACACCTGGGAGGAGAAACACTGGCCTCCGCTCCTaGGCAGAGCTTAGGACTGAGCTGGAAAGTAGTCTCTTGGGTAGT | + |
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Preference number: 1 (lower is better) Translates to: PAVTTPGRRNTGLRS*AELRTELESSLLGS Trigger: ACTACCCAAGAGACTACTTTCCAGCTCAGTCCTAAGCTCTGCTCAGGAGCGGAGGCCAGTGTTTCTCCTCCCAGGTGTGGTCACAGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR TCA 90 bp | GAATGGTCCCAAACACCCAGCAAATACTCCTTTCCATCCGTGGATTaGGGAGGGGCAGACCGGACAGGTCCAACTCTGAGCTCCTCGGGA | + |
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Preference number: 1 (lower is better) Translates to: EWSQTPSKYSFPSVD*GGADRTGPTLSSSG Trigger: TCCCGAGGAGCTCAGAGTTGGACCTGTCCGGTCTGCCCCTCCTCAATCCACGGATGGAAAGGAGTATTTGCTGGGTGTTTGGGACCATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR TCA 90 bp | TTGTCTGGGTTGGGAGCAGGAGGATGTGCTGAGCAGGCCATGCTTTaGCTCAGATGCTGCATTCCTGTCTCCCAGTCTGGCTTGGTACCC | + |
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Preference number: 1 (lower is better) Translates to: LSGLGAGGCAEQAML*LRCCIPVSQSGLVP Trigger: GGGTACCAAGCCAGACTGGGAGACAGGAATGCAGCATCTGAGTCAAAGCATGGCCTGCTCAGCACATCCTCCTGCTCCCAACCCAGACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR GCA 90 bp | CTGGATGCGGTGCTGAGGGTCACGTGGCCTTGCTGCCGATGGCTCTaGCCAGCAAGGATGCTGCCTACTAGTCAAAAAGGAACAAAAGGT | + |
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Preference number: 1 (lower is better) Translates to: LDAVLRVTWPCCRWL*PARMLPTSQKGTKG Trigger: ACCTTTTGTTCCTTTTTGACTAGTAGGCAGCATCCTTGCTGGGCAGAGCCATCGGCAGCAAGGCCACGTGACCCTCAGCACCGCATCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
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| 3UTR GCA 90 bp | CAGTGGTCACTGGCCTGCCCTTCTGGAAGGGCCAAGGTTGCTGCATaGAGTGGAGTAGCAGAGACAAGAAGTACCGCATGGGGTACAGTT | + |
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Preference number: 1 (lower is better) Translates to: QWSLACPSGRAKVAA*SGVAETRSTAWGTV Trigger: AACTGTACCCCATGCGGTACTTCTTGTCTCTGCTACTCCACTGCATGCAGCAACCTTGGCCCTTCCAGAAGGGCAGGCCAGTGACCACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR GCA 90 bp | GACTCCTGGAAACAAGGACTTTGCCCTAATTTCAGGGAACGTGGCTaGCTAACCCAGGCTTCCAGAGCTCGTGAGCAGGCGTACAGACCC | + |
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Preference number: 1 (lower is better) Translates to: DSWKQGLCPNFRERG*LTQASRAREQAYRP Trigger: GGGTCTGTACGCCTGCTCACGAGCTCTGGAAGCCTGGGTTAGGCAGCCACGTTCCCTGAAATTAGGGCAAAGTCCTTGTTTCCAGGAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR CCA 90 bp | TTTCTGGAGGTATCTGAACACCATGGTGGGGCAGAGTGCCAGGGGTaGGAGACGCCTGTTGCCTCATGGGTAGATATTCCTAGAGCAGCC | + |
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Preference number: 1 (lower is better) Translates to: FLEVSEHHGGAECQG*ETPVASWVDIPRAA Trigger: GGCTGCTCTAGGAATATCTACCCATGAGGCAACAGGCGTCTCCCACCCCTGGCACTCTGCCCCACCATGGTGTTCAGATACCTCCAGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR CCA 90 bp | GTCAAGGGAGGCCAGCCCTGGCTTGCTCTCTTCTGGACAGACTCCTaGAAACAAGGACTTTGCCCTAATTTCAGGGAACGTGGCTGCCTA | + |
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Preference number: 1 (lower is better) Translates to: VKGGQPWLALFWTDS*KQGLCPNFRERGCL Trigger: TAGGCAGCCACGTTCCCTGAAATTAGGGCAAAGTCCTTGTTTCCAGGAGTCTGTCCAGAAGAGAGCAAGCCAGGGCTGGCCTCCCTTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR TCA 90 bp | AGGCCTGCGGCTTGCTGCAGCCACAACAGAGGTGCAGACCTGGACTaGGTCTGCTGTCTCTTTTTGTTTGGTACAGGCATGAGCCTTCTT | + |
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Preference number: 1 (lower is better) Translates to: RPAACCSHNRGADLD*VCCLFLFGTGMSLL Trigger: AAGAAGGCTCATGCCTGTACCAAACAAAAAGAGACAGCAGACTCAGTCCAGGTCTGCACCTCTGTTGTGGCTGCAGCAAGCCGCAGGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR GCA 90 bp | CCCTGGCTTGCTCTCTTCTGGACAGACTCCTGGAAACAAGGACTTTaGCCTAATTTCAGGGAACGTGGCTGCCTAACCCAGGCTTCCAGA | + |
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Preference number: 1 (lower is better) Translates to: PWLALFWTDSWKQGL*PNFRERGCLTQASR Trigger: TCTGGAAGCCTGGGTTAGGCAGCCACGTTCCCTGAAATTAGGGCAAAGTCCTTGTTTCCAGGAGTCTGTCCAGAAGAGAGCAAGCCAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR CCA 90 bp | ATGCAGTGGAGTAGCAGAGACAAGAAGTACCGCATGGGGTACAGTTaGGAATGGAATCCAGTGATGCTCCTTGCGACGGGAGGCAGGTCT | + |
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Preference number: 1 (lower is better) Translates to: MQWSSRDKKYRMGYS*EWNPVMLLATGGRS Trigger: AGACCTGCCTCCCGTCGCAAGGAGCATCACTGGATTCCATTCCCAACTGTACCCCATGCGGTACTTCTTGTCTCTGCTACTCCACTGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR CCA 90 bp | AGCGTTGATCTGTCCGTTAGGCTGAGGAGTACAAGAGTGGACAGATaGATGCCAGGACAGATGGGTGCCGGGATGATACTTTGGTGTCAG | + |
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Preference number: 1 (lower is better) Translates to: SVDLSVRLRSTRVDR*MPGQMGAGMILWCQ Trigger: CTGACACCAAAGTATCATCCCGGCACCCATCTGTCCTGGCATCCATCTGTCCACTCTTGTACTCCTCAGCCTAACGGACAGATCAACGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR CCA 90 bp | GCAGAGGATGATGAATGGTCAGAGGCAAACGGGTTCATGGGAAGATaGCTGCACGTGTCAGAAGGAGGAGCTCAGGAAAGCGTTGATCTG | + |
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Preference number: 1 (lower is better) Translates to: AEDDEWSEANGFMGR*LHVSEGGAQESVDL Trigger: CAGATCAACGCTTTCCTGAGCTCCTCCTTCTGACACGTGCAGCCATCTTCCCATGAACCCGTTTGCCTCTGACCATTCATCATCCTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR TCA 90 bp | TCCTGGTTTAGCTTTGGCCACAGAACAGGAAGTAAAGTGGTATTCTaGGTTGGAGGCTCTGGGGGAGCAAGGCTCTGTGAGAGCCACATC | + |
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Preference number: 1 (lower is better) Translates to: SWFSFGHRTGSKVVF*VGGSGGARLCESHI Trigger: GATGTGGCTCTCACAGAGCCTTGCTCCCCCAGAGCCTCCAACTCAGAATACCACTTTACTTCCTGTTCTGTGGCCAAAGCTAAACCAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR CCA 90 bp | CCATGCTTTGACTCAGATGCTGCATTCCTGTCTCCCAGTCTGGCTTaGTACCCTAAGGGCCAGCTGAACGGAAGGAAAAGGAACAGAACA | + |
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Preference number: 1 (lower is better) Translates to: PCFDSDAAFLSPSLA*YPKGQLNGRKRNRT Trigger: TGTTCTGTTCCTTTTCCTTCCGTTCAGCTGGCCCTTAGGGTACCAAGCCAGACTGGGAGACAGGAATGCAGCATCTGAGTCAAAGCATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR CCA 90 bp | GGGCAGCATTTTGTTGTCTGTGGTGGGCCCTCTGTTCCTAAAAGGTaGGTAAGGCTGGTAAGGGTAAGAAAGGAGGTATTTGAACTAAAG | + |
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Preference number: 1 (lower is better) Translates to: GQHFVVCGGPSVPKR*VRLVRVRKEVFELK Trigger: CTTTAGTTCAAATACCTCCTTTCTTACCCTTACCAGCCTTACCCACCTTTTAGGAACAGAGGGCCCACCACAGACAACAAAATGCTGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR CCA 90 bp | AAGAAAAGCTACCAACTAGGTTTCTCTGATGACAGAGAGATCATGTaGACTTTACAAAGACAGAGACGCCGGAGAGTCAGGGAAACGGCA | + |
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Preference number: 1 (lower is better) Translates to: KKSYQLGFSDDREIM*TLQRQRRRRVRETA Trigger: TGCCGTTTCCCTGACTCTCCGGCGTCTCTGTCTTTGTAAAGTCCACATGATCTCTCTGTCATCAGAGAAACCTAGTTGGTAGCTTTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
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| 3UTR CCA 90 bp | ATTCCGGGCTACCCAACAGAATCCATAGAACGTTCTGTTAAACAATaGTCATACAGCTGTGAAGAAACACCAGCCACCAAAGAAGCCTAT | + |
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Preference number: 1 (lower is better) Translates to: IPGYPTESIERSVKQ*SYSCEETPATKEAY Trigger: ATAGGCTTCTTTGGTGGCTGGTGTTTCTTCACAGCTGTATGACCATTGTTTAACAGAACGTTCTATGGATTCTGTTGGGTAGCCCGGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR CCA 90 bp | ACTCTGGATAGAAAAATCACAGTTTCTTCCCTTACTCATGAGGAATaGGGAGAACCCCACAGTCTTCTTTGTCCATTTCTAAGTAGCTTG | + |
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Preference number: 1 (lower is better) Translates to: TLDRKITVSSLTHEE*GEPHSLLCPFLSSL Trigger: CAAGCTACTTAGAAATGGACAAAGAAGACTGTGGGGTTCTCCCCATTCCTCATGAGTAAGGGAAGAAACTGTGATTTTTCTATCCAGAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
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| 3UTR-3UTR TCA 90 bp | TCCTTCTGGGTGCTCCCCTGGGGGCTGGCTCCTCTCACTTGTCAGGCAGTGGGTCTGCTGTGTGCTCGCTaGTGCCCCTGGGGCTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: SFWVLPWGLAPLTCQAVGLLCAR*CPWGWL Trigger: CAGCCAGCCCCAGGGGCATCAGCGAGCACACAGCAG...ACCCACTGCCTGACAAGTGAGAGGAGCCAGCCCCCAGGGGAGCACCCAGAAGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR CAA 90 bp | GCCTCGGTGCCCGGCTTAGCAACCCCACCTTATCCTCCAGCCTCCTaGCCTCAGGCGACACCTAACCCTTTCCAGCCCCATCTCCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: ASVPGLATPPYPPAS*PQATPNPFQPHLPA Trigger: GGCAGGGAGATGGGGCTGGAAAGGGTTAGGTGTCGCCTGAGGCAAGGAGGCTGGAGGATAAGGTGGGGTTGCTAAGCCGGGCACCGAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR-3UTR CCA 90 bp | GCAGTTGCTCTCATTATCTCTGCTGTGTGCTCGCTGATGCCCCTGGGGCTGGCTACTGGTGGGCCACGGTaGGGCCAGGAGGTTGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: AVALIISAVCSLMPLGLATGGPR*GQEVGR Trigger: CCTGCCAACCTCCTGGCCCCACCGTGGCCCACCAGT...AGCCAGCCCCAGGGGCATCAGCGAGCACACAGCAGAGATAATGAGAGCAACTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
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| 3UTR CAA 90 bp | GCGACGGGAGGCAGGTCTCGCTCTACCAGCACACAGACTCAGTGTTaGCAGGCAGACGCTCAGGAGGACTGGTCCACTAGAGAAGGGCGG | + |
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Preference number: 2 (lower is better) Translates to: ATGGRSRSTSTQTQC*QADAQEDWSTREGR Trigger: CCGCCCTTCTCTAGTGGACCAGTCCTCCTGAGCGTCTGCCTGCAAACACTGAGTCTGTGTGCTGGTAGAGCGAGACCTGCCTCCCGTCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR-3UTR TCA 90 bp | CACAGAGAGACGGACACAGAGGGGACAGACAGCGGCGGAGCTGGCCACACTCCTGCTGGTGCCACTGTCTaGCGCTCTGCGATGCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: HRETDTEGTDSGGAGHTPAGATV*RSAMLS Trigger: AGAAAGCATCGCAGAGCGTCAGACAGTGGCACCAGC...AGGAGTGTGGCCAGCTCCGCCGCTGTCTGTCCCCTCTGTGTCCGTCTCTCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
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| 3UTR-3UTR GCA 90 bp | GGGGACCGATGGAAGGAGGTGCCTCCCTTGCATGTAGGGAACGCATGGACGGAGACTGGGGCTTCTGGATaGGGTGCTGAGGGTCACGTG | + |
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Preference number: 2 (lower is better) Translates to: GDRWKEVPPLHVGNAWTETGASG*GAEGHV Trigger: CACGTGACCCTCAGCACCGCATCCAGAAGCCCCAGT...CTCCGTCCATGCGTTCCCTACATGCAAGGGAGGCACCTCCTTCCATCGGTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
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| 3UTR-3UTR CCA 90 bp | GCAGTTGCTCTCATTATCTCTGCTGTGTGCTCGCTGATGCCCCTGGGGCTGGCTGTGGGGCCAGGAGGTTaGCAGGGCATGGCGTCCATG | + |
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Preference number: 2 (lower is better) Translates to: AVALIISAVCSLMPLGLAVGPGG*QGMASM Trigger: CATGGACGCCATGCCCTGCCAACCTCCTGGCCCCAC...AGCCAGCCCCAGGGGCATCAGCGAGCACACAGCAGAGATAATGAGAGCAACTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
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| 3UTR-3UTR CCA 90 bp | CTGCCCTTCTGGAAGGGCCAAGGTTGCTGCATGCAGTGGAGTAGCAGAGACAAGGCTCCAGGCAACTGGTaGGCCACGGTGGGGCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: LPFWKGQGCCMQWSSRDKAPGNW*ATVGPG Trigger: TCCTGGCCCCACCGTGGCCCACCAGTTGCCTGGAGC...CTTGTCTCTGCTACTCCACTGCATGCAGCAACCTTGGCCCTTCCAGAAGGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR-3UTR CCA 90 bp | CAGGGACGTAGGTCATCAGGAATGCCACCTCAGGACTCCTGGCCCGGACTTCTAGCCACAGCAAGACACTaGGGGCAGGGTGATGGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: QGRRSSGMPPQDSWPGLLATARH*GQGDGA Trigger: GGCCCCATCACCCTGCCCCCAGTGTCTTGCTGTGGC...TAGAAGTCCGGGCCAGGAGTCCTGAGGTGGCATTCCTGATGACCTACGTCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR-3UTR CCA 90 bp | ACTCAGATGCTGCATTCCTGTCTCCCAGTCTGGCTTGGTACCCTAAGGGCCAGCCCGCCCCCAGCTCTGTaGAGAGCCCCAGGCAGACTG | + |
|
Preference number: 2 (lower is better) Translates to: TQMLHSCLPVWLGTLRASPPPAL*RAPGRL Trigger: CAGTCTGCCTGGGGCTCTCCACAGAGCTGGGGGCGG...GCTGGCCCTTAGGGTACCAAGCCAGACTGGGAGACAGGAATGCAGCATCTGAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR CAA 90 bp | CAAGGCTCTGTGAGAGCCACATCGCCTAGGGGGTTTGGTTCATGCTaGGCTGTGGTTCCCAGGAGGCAGGGCCTGGGTCCATGGTGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: QGSVRATSPRGFGSC*AVVPRRQGLGPWCV Trigger: CACACACCATGGACCCAGGCCCTGCCTCCTGGGAACCACAGCCAAGCATGAACCAAACCCCCTAGGCGATGTGGCTCTCACAGAGCCTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR-3UTR TCA 90 bp | GGGGACCGATGGAAGGAGGTGCCTCCCTTGCATGTAGGGAACGCATGGACGGAGCTCTGCGATGCTTTCTaGGGGTGCTTGCGATGGACG | + |
|
Preference number: 2 (lower is better) Translates to: GDRWKEVPPLHVGNAWTELCDAF*GCLRWT Trigger: CGTCCATCGCAAGCACCCTCAGAAAGCATCGCAGAG...CTCCGTCCATGCGTTCCCTACATGCAAGGGAGGCACCTCCTTCCATCGGTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
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| 3UTR-3UTR CCA 90 bp | CTGAGGGTCACGTGGCCTTGCTGCCGATGGCTCTGCCCAGCAAGGATGCTGCCTACCTTGTCAGGTAGCTaGGGCTGCACGGATGCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: LRVTWPCCRWLCPARMLPTLSGS*GCTDAV Trigger: AACTGCATCCGTGCAGCCCCAGCTACCTGACAAGGT...AGGCAGCATCCTTGCTGGGCAGAGCCATCGGCAGCAAGGCCACGTGACCCTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
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| 3UTR-3UTR CCA 90 bp | TCCCATTCTTGGCCTTCTCCATCCCCAGCTAACCCTCTCAGGTCTTCTGACAGAACATCTCTGCGGCCTTaGAGGGCTGCGGCCGCGGGA | + |
|
Preference number: 2 (lower is better) Translates to: SHSWPSPSPANPLRSSDRTSLRP*RAAAAG Trigger: TCCCGCGGCCGCAGCCCTCCAAGGCCGCAGAGATGT...TCTGTCAGAAGACCTGAGAGGGTTAGCTGGGGATGGAGAAGGCCAAGAATGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR CAA 90 bp | CAGGGGACTAAGAGCACCCCGGTGTCAAGGGAGGCCAGCCCTGGCTaGCTCTCTTCTGGACAGACTCCTGGAAACAAGGACTTTGCCCTA | + |
|
Preference number: 2 (lower is better) Translates to: QGTKSTPVSREASPG*LSSGQTPGNKDFAL Trigger: TAGGGCAAAGTCCTTGTTTCCAGGAGTCTGTCCAGAAGAGAGCAAGCCAGGGCTGGCCTCCCTTGACACCGGGGTGCTCTTAGTCCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR-3UTR GCA 90 bp | CTGCCCTTCTGGAAGGGCCAAGGTTGCTGCATGCAGTGGAGTAGCAGAGACAAGTGCTGCCGATGGCTCTaGCCAGCAAGGATGCTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: LPFWKGQGCCMQWSSRDKCCRWL*PARMLP Trigger: AGGCAGCATCCTTGCTGGGCAGAGCCATCGGCAGCA...CTTGTCTCTGCTACTCCACTGCATGCAGCAACCTTGGCCCTTCCAGAAGGGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR-3UTR CCA 90 bp | TGGACTTTACAAAGACAGAGACGCCGGAGAGTCAGGGAAACGGCAGGAGACAAAACTGGTGGGCCACGGTaGGGCCAGGAGGTTGGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: WTLQRQRRRRVRETAGDKTGGPR*GQEVGR Trigger: CCTGCCAACCTCCTGGCCCCACCGTGGCCCACCAGT...TTTGTCTCCTGCCGTTTCCCTGACTCTCCGGCGTCTCTGTCTTTGTAAAGTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
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| 3UTR-3UTR TCA 90 bp | ACTCAGATGCTGCATTCCTGTCTCCCAGTCTGGCTTGGTACCCTAAGGGCCAGCTGTCTGGTTGTGCTGTaGGGTCTCTGGGTAGCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: TQMLHSCLPVWLGTLRASCLVVL*GLWVAG Trigger: CCCAGCTACCCAGAGACCTCACAGCACAACCAGACA...GCTGGCCCTTAGGGTACCAAGCCAGACTGGGAGACAGGAATGCAGCATCTGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR-3UTR CCA 90 bp | CTGAGGGTCACGTGGCCTTGCTGCCGATGGCTCTGCCCAGCAAGGATGCTGCCTCTTACTCATGAGGAATaGGGAGAACCCCACAGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: LRVTWPCCRWLCPARMLPLTHEE*GEPHSL Trigger: AAGACTGTGGGGTTCTCCCCATTCCTCATGAGTAAG...AGGCAGCATCCTTGCTGGGCAGAGCCATCGGCAGCAAGGCCACGTGACCCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
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| 3UTR-3UTR CCA 90 bp | GGGGACCGATGGAAGGAGGTGCCTCCCTTGCATGTAGGGAACGCATGGACGGAGTTTTTGGGCTTCCTTTaGAGCGAGGTGTGTCTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: GDRWKEVPPLHVGNAWTEFLGFL*SEVCLA Trigger: TGCCAGACACACCTCGCTCCAAAGGAAGCCCAAAAA...CTCCGTCCATGCGTTCCCTACATGCAAGGGAGGCACCTCCTTCCATCGGTCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
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| 3UTR-3UTR TCA 90 bp | GAGCAGGAGGATGTGCTGAGCAGGCCATGCTTTGACTCAGATGCTGCATTCCTGGCTGGTGCCACTGTCTaGCGCTCTGCGATGCTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: EQEDVLSRPCFDSDAAFLAGATV*RSAMLS Trigger: AGAAAGCATCGCAGAGCGTCAGACAGTGGCACCAGC...CAGGAATGCAGCATCTGAGTCAAAGCATGGCCTGCTCAGCACATCCTCCTGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR-3UTR TCA 90 bp | GGGGACCGATGGAAGGAGGTGCCTCCCTTGCATGTAGGGAACGCATGGACGGAGAGGGCGGAGAGACCATaGAGAAAATACTTTGGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: GDRWKEVPPLHVGNAWTERAERP*RKYFGS Trigger: ACTGCCAAAGTATTTTCTTCATGGTCTCTCCGCCCT...CTCCGTCCATGCGTTCCCTACATGCAAGGGAGGCACCTCCTTCCATCGGTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
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| 3UTR-3UTR TCA 90 bp | GAGCAGGAGGATGTGCTGAGCAGGCCATGCTTTGACTCAGATGCTGCATTCCTGGTAGGAGCTTCAGGATaGGCAAGGAGTTCCCAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: EQEDVLSRPCFDSDAAFLVGASG*ARSSQG Trigger: CCCCTGGGAACTCCTTGCTCATCCTGAAGCTCCTAC...CAGGAATGCAGCATCTGAGTCAAAGCATGGCCTGCTCAGCACATCCTCCTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR-3UTR GCA 90 bp | CAGAGACGCCGGAGAGTCAGGGAAACGGCAGGAGACAAAGACACGGAGAGACACCTTTCTGAGGGTGCTTaGGATGGACGAGAGGCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: QRRRRVRETAGDKDTERHLSEGA*DGREAV Trigger: TACAGCCTCTCGTCCATCGCAAGCACCCTCAGAAAG...GTGTCTCTCCGTGTCTTTGTCTCCTGCCGTTTCCCTGACTCTCCGGCGTCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
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| 3UTR-3UTR CCA 90 bp | TCTGGCATCCTTGGCTGGCTAGCTGGCAAGGTAGTTTACAGGTGTGTTTCTTTTGTGGGGCCAGGAGGTTaGCAGGGCATGGCGTCCATG | + |
|
Preference number: 2 (lower is better) Translates to: SGILGWLAGKVVYRCVSFVGPGG*QGMASM Trigger: CATGGACGCCATGCCCTGCCAACCTCCTGGCCCCAC...AAAAGAAACACACCTGTAAACTACCTTGCCAGCTAGCCAGCCAAGGATGCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
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| 3UTR-3UTR CCA 90 bp | ACACAGAGGGGACAGACAGCGGCGGAGCTGGCCACACTCCTGCTGGTGCCACTGATCTGTGTTTTCTTTTaGAGAGAAGCAGTAGCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: TQRGQTAAELATLLLVPLICVFF*REAVAA Trigger: TGCTGCTACTGCTTCTCTCCAAAAGAAAACACAGAT...CAGTGGCACCAGCAGGAGTGTGGCCAGCTCCGCCGCTGTCTGTCCCCTCTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
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| 3UTR-3UTR CCA 90 bp | ACAAAGACAGAGACGCCGGAGAGTCAGGGAAACGGCAGGAGACAAAGACACGGAACCTTGTCAGGTAGCTaGGGCTGCACGGATGCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: TKTETPESQGNGRRQRHGTLSGS*GCTDAV Trigger: AACTGCATCCGTGCAGCCCCAGCTACCTGACAAGGT...TCCGTGTCTTTGTCTCCTGCCGTTTCCCTGACTCTCCGGCGTCTCTGTCTTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| 3UTR-3UTR CCA 90 bp | TGGACTTTACAAAGACAGAGACGCCGGAGAGTCAGGGAAACGGCAGGAGACAAATGGCCACACTCCTGCTaGTGCCACTGTCTGACGCTC | + |
|
Preference number: 2 (lower is better) Translates to: WTLQRQRRRRVRETAGDKWPHSC*CHCLTL Trigger: GAGCGTCAGACAGTGGCACCAGCAGGAGTGTGGCCA...TTTGTCTCCTGCCGTTTCCCTGACTCTCCGGCGTCTCTGTCTTTGTAAAGTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
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| 3UTR-3UTR CCA 90 bp | GCATGCAGTGGAGTAGCAGAGACAAGAAGTACCGCATGGGGTACAGTTGGGAATCGGGTGAGGTGCGGGTaGCTGCTGGCTTTCGTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: ACSGVAETRSTAWGTVGNRVRCG*LLAFVF Trigger: AAACACGAAAGCCAGCAGCCACCCGCACCTCACCCG...ATTCCCAACTGTACCCCATGCGGTACTTCTTGTCTCTGCTACTCCACTGCATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR CAA 90 bp | AGCTGGGGCTGCACGGATGCAGTTCTGTTGGATCTGTGTTTTCTTTaGGAGAGAAGCAGTAGCAGCAATGGCTCCAGGCAACTGGTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: SWGCTDAVLLDLCFL*ERSSSSNGSRQLVG Trigger: GCCCACCAGTTGCCTGGAGCCATTGCTGCTACTGCTTCTCTCCAAAAGAAAACACAGATCCAACAGAACTGCATCCGTGCAGCCCCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
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| 3UTR-3UTR TCA 90 bp | TTCTCTCCCCAAGCAGCTCCAGATGTGTCACAGCTGCCACAAGAATGTATCCAAACTGTGGCCTTAAGGTaGCACTGCCCACAGAGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: FSPQAAPDVSQLPQECIQTVALR*HCPQRP Trigger: GGGCCTCTGTGGGCAGTGTCACCTTAAGGCCACAGT...TTGGATACATTCTTGTGGCAGCTGTGACACATCTGGAGCTGCTTGGGGAGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR-3UTR GCA 90 bp | ACAAAGACAGAGACGCCGGAGAGTCAGGGAAACGGCAGGAGACAAAGACACGGACTTTCTGAGGGTGCTTaGGATGGACGAGAGGCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: TKTETPESQGNGRRQRHGLSEGA*DGREAV Trigger: TACAGCCTCTCGTCCATCGCAAGCACCCTCAGAAAG...TCCGTGTCTTTGTCTCCTGCCGTTTCCCTGACTCTCCGGCGTCTCTGTCTTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
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| 3UTR-3UTR GCA 90 bp | GGCTCCATTCCGGGCTACCCAACAGAATCCATAGAACGTTCTGTTAAACAATGGGTCTTCCGGGTGAGGTaGGGGTGGCTGCTGGCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: GSIPGYPTESIERSVKQWVFRVR*GWLLAF Trigger: GAAAGCCAGCAGCCACCCGCACCTCACCCGGAAGAC...CCATTGTTTAACAGAACGTTCTATGGATTCTGTTGGGTAGCCCGGAATGGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR-3UTR GCA 90 bp | GAGCAGGAGGATGTGCTGAGCAGGCCATGCTTTGACTCAGATGCTGCATTCCTGTCATGGGAAGATGGCTaGACGTGTCAGAAGGAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: EQEDVLSRPCFDSDAAFLSWEDG*TCQKEE Trigger: CTCCTCCTTCTGACACGTGCAGCCATCTTCCCATGA...CAGGAATGCAGCATCTGAGTCAAAGCATGGCCTGCTCAGCACATCCTCCTGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR CAA 90 bp | CCAATAAAGAACACCCATGGTCCCTGTCCCTTCAAAGCTGTGAGGTaGTCTGGTTGTGCTGTGAGGTCTCTGGGTAGCTGGGGTCAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: PIKNTHGPCPFKAVR*SGCAVRSLGSWGQS Trigger: GCTTTGACCCCAGCTACCCAGAGACCTCACAGCACAACCAGACAACCTCACAGCTTTGAAGGGACAGGGACCATGGGTGTTCTTTATTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR-3UTR TCA 90 bp | TTCTCTCCCCAAGCAGCTCCAGATGTGTCACAGCTGCCACAAGAATGTATCCAAGGGAATGGAATCCAGTaGTGCTCCTTGCGACGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: FSPQAAPDVSQLPQECIQGNGIQ*CSLRRE Trigger: CTCCCGTCGCAAGGAGCATCACTGGATTCCATTCCC...TTGGATACATTCTTGTGGCAGCTGTGACACATCTGGAGCTGCTTGGGGAGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR-3UTR CCA 90 bp | GGCTCTGCCCAGCAAGGATGCTGCCTACTAGTCAAAAAGGAACAAAAGGTTTCTGGAGCGAGGTGTGTCTaGCATCCTTGGCTGGCTAGC | + |
|
Preference number: 2 (lower is better) Translates to: GSAQQGCCLLVKKEQKVSGARCV*HPWLAS Trigger: GCTAGCCAGCCAAGGATGCCAGACACACCTCGCTCC...AGAAACCTTTTGTTCCTTTTTGACTAGTAGGCAGCATCCTTGCTGGGCAGAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
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| 3UTR-3UTR CCA 90 bp | TCCCTTCTCTCCCCAAGCAGCTCCAGATGTGTCACAGCTGCCACAAGAATGTATAGCTGTGACCACACCTaGGAGGAGAAACACTGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: SLLSPSSSRCVTAATRMYSCDHT*EEKHWP Trigger: AGGCCAGTGTTTCTCCTCCCAGGTGTGGTCACAGCT...ATACATTCTTGTGGCAGCTGTGACACATCTGGAGCTGCTTGGGGAGAGAAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR-3UTR TCA 90 bp | TCCCATTCTTGGCCTTCTCCATCCCCAGCTAACCCTCTCAGGTCTTCTGACAGACCTTCATTTCCTCCTTaGATCCTTGAGGGAGTCGAG | + |
|
Preference number: 2 (lower is better) Translates to: SHSWPSPSPANPLRSSDRPSFPP*ILEGVE Trigger: CTCGACTCCCTCAAGGATTCAAGGAGGAAATGAAGG...TCTGTCAGAAGACCTGAGAGGGTTAGCTGGGGATGGAGAAGGCCAAGAATGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR-3UTR CCA 90 bp | ATCACAGTTTCTTCCCTTACTCATGAGGAATGGGGAGAACCCCACAGTCTTCTTTGGCCACACTCCTGCTaGTGCCACTGTCTGACGCTC | + |
|
Preference number: 2 (lower is better) Translates to: ITVSSLTHEEWGEPHSLLWPHSC*CHCLTL Trigger: GAGCGTCAGACAGTGGCACCAGCAGGAGTGTGGCCA...AAGAAGACTGTGGGGTTCTCCCCATTCCTCATGAGTAAGGGAAGAAACTGTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
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| 3UTR-3UTR CCA 90 bp | GTGCTCGCTGATGCCCCTGGGGCTGGCTGGGCGATACAGCAACTCTGGATAGAAGACAGAGAGATCATGTaGACTTTACAAAGACAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: VLADAPGAGWAIQQLWIEDREIM*TLQRQR Trigger: TCTCTGTCTTTGTAAAGTCCACATGATCTCTCTGTC...TTCTATCCAGAGTTGCTGTATCGCCCAGCCAGCCCCAGGGGCATCAGCGAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
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| 3UTR-3UTR CCA 90 bp | ACTCAGATGCTGCATTCCTGTCTCCCAGTCTGGCTTGGTACCCTAAGGGCCAGCTCTGTTCCTAAAAGGTaGGTAAGGCTGGTAAGGGTA | + |
|
Preference number: 2 (lower is better) Translates to: TQMLHSCLPVWLGTLRASSVPKR*VRLVRV Trigger: TACCCTTACCAGCCTTACCCACCTTTTAGGAACAGA...GCTGGCCCTTAGGGTACCAAGCCAGACTGGGAGACAGGAATGCAGCATCTGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR CAA 90 bp | GAGCTCTGCCTAGCAGACATGGCATCTCACCCTCGATGTCTACAATaGCTAGTCAAATCCCATGCACAGGAGACTCACTGTGGTCCAATG | + |
|
Preference number: 2 (lower is better) Translates to: ELCLADMASHPRCLQ*LVKSHAQETHCGPM Trigger: CATTGGACCACAGTGAGTCTCCTGTGCATGGGATTTGACTAGCAATTGTAGACATCGAGGGTGAGATGCCATGTCTGCTAGGCAGAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR-3UTR CCA 90 bp | TTTATCTGTGAGCTGTCTCCAGGAATAGACAGTCCCCCTGAGCCCAGCTCGCCTGGAGATGAATTTGGCTaGGCAGCATTTTGTTGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: FICELSPGIDSPPEPSSPGDEFG*AAFCCL Trigger: CAGACAACAAAATGCTGCCCAGCCAAATTCATCTCC...AGGCGAGCTGGGCTCAGGGGGACTGTCTATTCCTGGAGACAGCTCACAGATAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR-3UTR CCA 90 bp | AAAAGCTACCAACTAGGTTTCTCTGATGACAGAGAGATCATGTGGACTTTACAAGTGGGGCCAGGAGGTTaGCAGGGCATGGCGTCCATG | + |
|
Preference number: 2 (lower is better) Translates to: KSYQLGFSDDREIMWTLQVGPGG*QGMASM Trigger: CATGGACGCCATGCCCTGCCAACCTCCTGGCCCCAC...TTGTAAAGTCCACATGATCTCTCTGTCATCAGAGAAACCTAGTTGGTAGCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
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| 3UTR-3UTR CCA 90 bp | ATGTGTAGGGCATGGAACACAGCTTTTCATGAACAAAACATCCAGTACTCTCCTTGGCCACACTCCTGCTaGTGCCACTGTCTGACGCTC | + |
|
Preference number: 2 (lower is better) Translates to: MCRAWNTAFHEQNIQYSPWPHSC*CHCLTL Trigger: GAGCGTCAGACAGTGGCACCAGCAGGAGTGTGGCCA...AGGAGAGTACTGGATGTTTTGTTCATGAAAAGCTGTGTTCCATGCCCTACACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR-3UTR CCA 90 bp | TGGCTCTGCCCAGCAAGGATGCTGCCTACTAGTCAAAAAGGAACAAAAGGTTTCTCTGGCATCCTTGGCTaGCTAGCTGGCAAGGTAGTT | + |
|
Preference number: 2 (lower is better) Translates to: WLCPARMLPTSQKGTKGFSGILG*LAGKVV Trigger: AACTACCTTGCCAGCTAGCCAGCCAAGGATGCCAGA...GAAACCTTTTGTTCCTTTTTGACTAGTAGGCAGCATCCTTGCTGGGCAGAGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
||
| 3UTR-3UTR CCA 90 bp | TTCTCTCCCCAAGCAGCTCCAGATGTGTCACAGCTGCCACAAGAATGTATCCAAGGTTGCTGCATGCAGTaGAGTAGCAGAGACAAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: FSPQAAPDVSQLPQECIQGCCMQ*SSRDKK Trigger: CTTCTTGTCTCTGCTACTCCACTGCATGCAGCAACC...TTGGATACATTCTTGTGGCAGCTGTGACACATCTGGAGCTGCTTGGGGAGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR-3UTR GCA 90 bp | CAACTAGGTTTCTCTGATGACAGAGAGATCATGTGGACTTTACAAAGACAGAGAAGCTGGCCACACTCCTaGTGGTGCCACTGTCTGACG | + |
|
Preference number: 2 (lower is better) Translates to: QLGFSDDREIMWTLQRQRSWPHS*WCHCLT Trigger: CGTCAGACAGTGGCACCAGCAGGAGTGTGGCCAGCT...TCTCTGTCTTTGTAAAGTCCACATGATCTCTCTGTCATCAGAGAAACCTAGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| 3UTR-3UTR GCA 90 bp | TTTATCTGTGAGCTGTCTCCAGGAATAGACAGTCCCCCTGAGCCCAGCTCGCCTTTTGCTGTCTCCTTATaGTCTCAAAAGCAGTCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: FICELSPGIDSPPEPSSPFAVSL*SQKQSR Trigger: TCTTGACTGCTTTTGAGAGCATAAGGAGACAGCAAA...AGGCGAGCTGGGCTCAGGGGGACTGTCTATTCCTGGAGACAGCTCACAGATAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR-3UTR CCA 90 bp | GCTGGAAGGGAGGCAGAGGATGATGAATGGTCAGAGGCAAACGGGTTCATGGGAAGCTGCTTCTTAAGTTaGAAATTGCAGTTGCTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: AGREAEDDEWSEANGFMGSCFLS*KLQLLS Trigger: TGAGAGCAACTGCAATTTCCAACTTAAGAAGCAGCT...TCCCATGAACCCGTTTGCCTCTGACCATTCATCATCCTCTGCCTCCCTTCCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR-3UTR CCA 90 bp | AAGACTGACATGCAAACCAACCCAGGGCGGAGAGACCATGAAGAAAATACTTTGCCTTGGCTGGCTAGCTaGCAAGGTAGTTTACAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: KTDMQTNPGRRDHEENTLPWLAS*QGSLQV Trigger: CACCTGTAAACTACCTTGCCAGCTAGCCAGCCAAGG...CAAAGTATTTTCTTCATGGTCTCTCCGCCCTGGGTTGGTTTGCATGTCAGTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
||
| 3UTR-3UTR CCA 90 bp | TTCTCTCCCCAAGCAGCTCCAGATGTGTCACAGCTGCCACAAGAATGTATCCAAGGGTACAGTTGGGAATaGAATCCAGTGATGCTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: FSPQAAPDVSQLPQECIQGYSWE*NPVMLL Trigger: AAGGAGCATCACTGGATTCCATTCCCAACTGTACCC...TTGGATACATTCTTGTGGCAGCTGTGACACATCTGGAGCTGCTTGGGGAGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR-3UTR CCA 90 bp | GCTGCCGATGGCTCTGCCCAGCAAGGATGCTGCCTACTAGTCAAAAAGGAACAAGACAGAGAGATCATGTaGACTTTACAAAGACAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: AADGSAQQGCCLLVKKEQDREIM*TLQRQR Trigger: TCTCTGTCTTTGTAAAGTCCACATGATCTCTCTGTC...TTGTTCCTTTTTGACTAGTAGGCAGCATCCTTGCTGGGCAGAGCCATCGGCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
||
| 3UTR-3UTR CCA 90 bp | TGGCTCTGCCCAGCAAGGATGCTGCCTACTAGTCAAAAAGGAACAAAAGGTTTCCTTACTCATGAGGAATaGGGAGAACCCCACAGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: WLCPARMLPTSQKGTKGFLTHEE*GEPHSL Trigger: AAGACTGTGGGGTTCTCCCCATTCCTCATGAGTAAG...GAAACCTTTTGTTCCTTTTTGACTAGTAGGCAGCATCCTTGCTGGGCAGAGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
||
| 3UTR-3UTR CCA 90 bp | TCCCTTCTCTCCCCAAGCAGCTCCAGATGTGTCACAGCTGCCACAAGAATGTATATCTGTGTTTTCTTTTaGAGAGAAGCAGTAGCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: SLLSPSSSRCVTAATRMYICVFF*REAVAA Trigger: TGCTGCTACTGCTTCTCTCCAAAAGAAAACACAGAT...ATACATTCTTGTGGCAGCTGTGACACATCTGGAGCTGCTTGGGGAGAGAAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR-3UTR CCA 90 bp | CCAAAAAGATTGTCACAGTTTCGTTTAGGAAGTGTGCTCTCTCTGGGAAGAGCATTTTTGGGCTTCCTTTaGAGCGAGGTGTGTCTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: PKRLSQFRLGSVLSLGRAFLGFL*SEVCLA Trigger: TGCCAGACACACCTCGCTCCAAAGGAAGCCCAAAAA...TGCTCTTCCCAGAGAGAGCACACTTCCTAAACGAAACTGTGACAATCTTTTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR CAA 90 bp | CCTAAACCTCACAGACTTCCGTGGTTTGTCTTAATTTCTTTTTATTaGGCAAACATCTCCTCGGTACTGATGCCACGGTTTGGGACCTCT | + |
|
Preference number: 2 (lower is better) Translates to: PKPHRLPWFVLISFY*ANISSVLMPRFGTS Trigger: AGAGGTCCCAAACCGTGGCATCAGTACCGAGGAGATGTTTGCCAAATAAAAAGAAATTAAGACAAACCACGGAAGTCTGTGAGGTTTAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR-3UTR GCA 90 bp | GGCTCTGCCCAGCAAGGATGCTGCCTACTAGTCAAAAAGGAACAAAAGGTTTCTGTTGGAAATTGCAGTTaGTCTCATTATCTCTGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: GSAQQGCCLLVKKEQKVSVGNCS*SHYLCC Trigger: ACAGCAGAGATAATGAGAGCAACTGCAATTTCCAAC...AGAAACCTTTTGTTCCTTTTTGACTAGTAGGCAGCATCCTTGCTGGGCAGAGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
||
| 3UTR-3UTR GCA 90 bp | ATGTGTAGGGCATGGAACACAGCTTTTCATGAACAAAACATCCAGTACTCTCCTGGATTTGGGGACTTGTaGGAGTTGTTGGTTGACTGT | + |
|
Preference number: 2 (lower is better) Translates to: MCRAWNTAFHEQNIQYSPGFGDL*ELLVDC Trigger: ACAGTCAACCAACAACTCGCACAAGTCCCCAAATCC...AGGAGAGTACTGGATGTTTTGTTCATGAAAAGCTGTGTTCCATGCCCTACACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR-3UTR CCA 90 bp | ATCACAGTTTCTTCCCTTACTCATGAGGAATGGGGAGAACCCCACAGTCTTCTTATCTGTGTTTTCTTTTaGAGAGAAGCAGTAGCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: ITVSSLTHEEWGEPHSLLICVFF*REAVAA Trigger: TGCTGCTACTGCTTCTCTCCAAAAGAAAACACAGAT...AAGAAGACTGTGGGGTTCTCCCCATTCCTCATGAGTAAGGGAAGAAACTGTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| 3UTR-3UTR CCA 90 bp | AAGACTGACATGCAAACCAACCCAGGGCGGAGAGACCATGAAGAAAATACTTTGAGCTGCTTCTTAAGTTaGAAATTGCAGTTGCTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: KTDMQTNPGRRDHEENTLSCFLS*KLQLLS Trigger: TGAGAGCAACTGCAATTTCCAACTTAAGAAGCAGCT...CAAAGTATTTTCTTCATGGTCTCTCCGCCCTGGGTTGGTTTGCATGTCAGTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
||
| 3UTR CAA 90 bp | TGTCTCCTTATGCTCTCAAAAGCAGTCAAGAATCAACCAAAAAGATaGTCACAGTTTCGTTTAGGAAGTGTGCTCTCTCTGGGAAGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: CLLMLSKAVKNQPKR*SQFRLGSVLSLGRA Trigger: TGCTCTTCCCAGAGAGAGCACACTTCCTAAACGAAACTGTGACAATCTTTTTGGTTGATTCTTGACTGCTTTTGAGAGCATAAGGAGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTCTGGGTGCTCCCCTGGGGGCTGGCTCCTCTCACTTGTCAGGCAGTGGGTGCTGGGCCTTGGGGGTaGGAGAGCTCTGCCTGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: SFWVLPWGLAPLTCQAVGAGPWG*ESSACY Trigger: GTAGCAGGCAGAGCTCTCCAACCCCCAAGGCCCAGC...ACCCACTGCCTGACAAGTGAGAGGAGCCAGCCCCCAGGGGAGCACCCAGAAGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR GCA 72 bp | GGGCTTCTGGATGCGGTGCTGAGGGTCACGTGGCCTTaGTGCCGATGGCTCTGCCCAGCAAGGATGCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: GLLDAVLRVTWP*CRWLCPARMLP Trigger: AGGCAGCATCCTTGCTGGGCAGAGCCATCGGCAGCAAGGCCACGTGACCCTCAGCACCGCATCCAGAAGCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
||
| 3UTR GCA 72 bp | TGGGATCTGGGCTGGGCCTTGGGGGTTGGAGAGCTCTaGCTGCTACCTGCCCTCCCTACTCAGCCTTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: WDLGWALGVGEL*LLPALPTQPSW Trigger: CCAGGAAGGCTGAGTAGGGAGGGCAGGTAGCAGGCAGAGCTCTCCAACCCCCAAGGCCCAGCCCAGATCCCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR CCA 72 bp | TGGAGAGAAGCAGTAGCAGCAATGGCTCCAGGCAACTaGTGGGCCACGGTGGGGCCAGGAGGTTGGCAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: WREAVAAMAPGN*WATVGPGGWQG Trigger: GCCCTGCCAACCTCCTGGCCCCACCGTGGCCCACCAGTTGCCTGGAGCCATTGCTGCTACTGCTTCTCTCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| 3UTR CCA 72 bp | AGAGACGGACACAGAGGGGACAGACAGCGGCGGAGCTaGCCACACTCCTGCTGGTGCCACTGTCTGACGCTC | + |
|
Preference number: 3 (lower is better) Translates to: RDGHRGDRQRRS*PHSCWCHCLTL Trigger: GAGCGTCAGACAGTGGCACCAGCAGGAGTGTGGCCAGCTCCGCCGCTGTCTGTCCCCTCTGTGTCCGTCTCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| 3UTR GCA 72 bp | AGAGGGGACAGACAGCGGCGGAGCTGGCCACACTCCTaGTGGTGCCACTGTCTGACGCTCTGCGATGCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: RGDRQRRSWPHS*WCHCLTLCDAF Trigger: GAAAGCATCGCAGAGCGTCAGACAGTGGCACCAGCAGGAGTGTGGCCAGCTCCGCCGCTGTCTGTCCCCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| 3UTR GCA 72 bp | ACAACGCTCAGGCTCACGCTGACTGGGGCTTCTGGATaGGGTGCTGAGGGTCACGTGGCCTTGCTGCCGATG | + |
|
Preference number: 3 (lower is better) Translates to: TTLRLTLTGASG*GAEGHVALLPM Trigger: CATCGGCAGCAAGGCCACGTGACCCTCAGCACCGCATCCAGAAGCCCCAGTCAGCGTGAGCCTGAGCGTTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
||
| 3UTR CCA 72 bp | CAGACTCAGTGTTTGCAGGCAGACGCTCAGGAGGACTaGTCCACTAGAGAAGGGCGGGCAGGCAGGAGGCCG | + |
|
Preference number: 3 (lower is better) Translates to: QTQCLQADAQED*STREGRAGRRP Trigger: CGGCCTCCTGCCTGCCCGCCCTTCTCTAGTGGACCAGTCCTCCTGAGCGTCTGCCTGCAAACACTGAGTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTGGTGCCACTGTCTGACGCTCTGCGATGCTTTCTGAGGGTGCTTGCGATGGGTGGGGCCAGGAGGTaGGCAGGGCATGGCGTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: LLVPLSDALRCFLRVLAMGGARR*AGHGVH Trigger: ATGGACGCCATGCCCTGCCAACCTCCTGGCCCCACC...CATCGCAAGCACCCTCAGAAAGCATCGCAGAGCGTCAGACAGTGGCACCAGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGAAGGGAGGCAGAGGATGATGAATGGTCAGAGGCAAACGGGTTCATGGGATACATCTCTGCGGCCTaGGAGGGCTGCGGCCGCGGG | + |
|
Preference number: 3 (lower is better) Translates to: AGREAEDDEWSEANGFMGYISAA*EGCGRG Trigger: CCCGCGGCCGCAGCCCTCCAAGGCCGCAGAGATGTA...TCCCATGAACCCGTTTGCCTCTGACCATTCATCATCCTCTGCCTCCCTTCCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR TCA 72 bp | GGCGGAGCTGGCCACACTCCTGCTGGTGCCACTGTCTaGCGCTCTGCGATGCTTTCTGAGGGTGCTTGCGAT | + |
|
Preference number: 3 (lower is better) Translates to: GGAGHTPAGATV*RSAMLSEGACD Trigger: ATCGCAAGCACCCTCAGAAAGCATCGCAGAGCGTCAGACAGTGGCACCAGCAGGAGTGTGGCCAGCTCCGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| 3UTR GCA 72 bp | CTTCTGGATGCGGTGCTGAGGGTCACGTGGCCTTGCTaGCGATGGCTCTGCCCAGCAAGGATGCTGCCTACT | + |
|
Preference number: 3 (lower is better) Translates to: LLDAVLRVTWPC*RWLCPARMLPT Trigger: AGTAGGCAGCATCCTTGCTGGGCAGAGCCATCGGCAGCAAGGCCACGTGACCCTCAGCACCGCATCCAGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
||
| 3UTR CCA 72 bp | GGTCATGAGATGGGATCTGGGCTGGGCCTTGGGGGTTaGAGAGCTCTGCCTGCTACCTGCCCTCCCTACTCA | + |
|
Preference number: 3 (lower is better) Translates to: GHEMGSGLGLGG*RALPATCPPYS Trigger: TGAGTAGGGAGGGCAGGTAGCAGGCAGAGCTCTCCAACCCCCAAGGCCCAGCCCAGATCCCATCTCATGACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR CCA 72 bp | TCCCCTGGGGGCTGGCTCCTCTCACTTGTCAGGCAGTaGGTGGGACCTGAGCTGTGGTGTCATTCAGCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: SPGGWLLSLVRQ*VGPELWCHSAS Trigger: ACTGGCTGAATGACACCACAGCTCAGGTCCCACCCACTGCCTGACAAGTGAGAGGAGCCAGCCCCCAGGGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR GCA 72 bp | GTCCTGGCTTCTCTGAAACCCACAAGAATACATCTCTaGGGCCTTGGAGGGCTGCGGCCGCGGGAACCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: VLASLKPTRIHL*GLGGLRPREPS Trigger: GGAAGGTTCCCGCGGCCGCAGCCCTCCAAGGCCGCAGAGATGTATTCTTGTGGGTTTCAGAGAAGCCAGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR GCA 72 bp | TCTGTGAGAGCCACATCGCCTAGGGGGTTTGGTTCATaGTTGGCTGTGGTTCCCAGGAGGCAGGGCCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: SVRATSPRGFGS*LAVVPRRQGLG Trigger: ACCCAGGCCCTGCCTCCTGGGAACCACAGCCAAGCATGAACCAAACCCCCTAGGCGATGTGGCTCTCACAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR GCA 72 bp | GAAGCAGTGGCTCCCCAGGCAGGCTGTGTGATGCTATaGTCACCCCAGGTATGGTGTGAGCTGAGGGCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: EAVAPQAGCVML*SPQVWCELRAP Trigger: AGGAGCCCTCAGCTCACACCATACCTGGGGTGAGCATAGCATCACACAGCCTGCCTGGGGAGCCACTGCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR CCA 72 bp | ATTGGGGATACAACACAGGGATATGTACAGCCGGGCTaGAGTCTTCCGGGTGAGGTGCGGGTGGCTGCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: IGDTTQGYVQPG*SLPGEVRVAAG Trigger: GCCAGCAGCCACCCGCACCTCACCCGGAAGACTCCAGCCCGGCTGTACATATCCCTGTGTTGTATCCCCAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR CCA 72 bp | CTGGGGGCTGGCTCCTCTCACTTGTCAGGCAGTGGGTaGGACCTGAGCTGTGGTGTCATTCAGCCAGTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LGAGSSHLSGSG*DLSCGVIQPVP Trigger: AGGAACTGGCTGAATGACACCACAGCTCAGGTCCCACCCACTGCCTGACAAGTGAGAGGAGCCAGCCCCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR CCA 72 bp | CAGGCAGGCTGTGTGATGCTATGCTCACCCCAGGTATaGTGTGAGCTGAGGGCTCCTGGGCCTCTTGTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: QAGCVMLCSPQV*CELRAPGPLVW Trigger: CCAGACAAGAGGCCCAGGAGCCCTCAGCTCACACCATACCTGGGGTGAGCATAGCATCACACAGCCTGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGAAGGGAGGCAGAGGATGATGAATGGTCAGAGGCAAACGGGTTCATGGGAAGGTCCCGGCAGACCTaGTCAGGTAGCTGGGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: AGREAEDDEWSEANGFMGRSRQT*SGSWGC Trigger: GCAGCCCCAGCTACCTGACAAGGTCTGCCGGGACCT...TCCCATGAACCCGTTTGCCTCTGACCATTCATCATCCTCTGCCTCCCTTCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR-3UTR CAA 90 bp | ACCACCCCATCACCCAGAGCTCTTTCCTACCAGTGGTCACTGGCCTGCCCTTCTAGGCAGGAGGCCGCCTaGTGTCCTGGCTTCTCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: TTPSPRALSYQWSLACPSRQEAA*CPGFSE Trigger: TTCAGAGAAGCCAGGACACAAGGCGGCCTCCTGCCT...AGAAGGGCAGGCCAGTGACCACTGGTAGGAAAGAGCTCTGGGTGATGGGGTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR TCA 72 bp | GGGCAGGCAGGAGGCCGCCTTGTGTCCTGGCTTCTCTaGAACCCACAAGAATACATCTCTGCGGCCTTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: GQAGGRLVSWLL*NPQEYISAALE Trigger: CTCCAAGGCCGCAGAGATGTATTCTTGTGGGTTTCAGAGAAGCCAGGACACAAGGCGGCCTCCTGCCTGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR TCA 72 bp | TCTTGGGTAGTCCTCACGGAAAGGCCAGTCTGGGTCTaGGGCAGGGCTGGGACACACAGGACTTGTGCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: SWVVLTERPVWV*GRAGTHRTCAK Trigger: CTTGGCACAAGTCCTGTGTGTCCCAGCCCTGCCTCAGACCCAGACTGGCCTTTCCGTGAGGACTACCCAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR TCA 72 bp | AGGCTGTGTGATGCTATGCTCACCCCAGGTATGGTGTaGGCTGAGGGCTCCTGGGCCTCTTGTCTGGGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: RLCDAMLTPGMV*AEGSWASCLGW Trigger: CCAACCCAGACAAGAGGCCCAGGAGCCCTCAGCTCACACCATACCTGGGGTGAGCATAGCATCACACAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR CCA 72 bp | CCCCATCACCCAGAGCTCTTTCCTACCAGTGGTCACTaGCCTGCCCTTCTGGAAGGGCCAAGGTTGCTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: PHHPELFPTSGH*PALLEGPRLLH Trigger: ATGCAGCAACCTTGGCCCTTCCAGAAGGGCAGGCCAGTGACCACTGGTAGGAAAGAGCTCTGGGTGATGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTGCCGATGGCTCTGCCCAGCAAGGATGCTGCCTACTAGTCAAAAAGGAACAAAGGTCCCGGCAGACCTaGTCAGGTAGCTGGGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: AADGSAQQGCCLLVKKEQRSRQT*SGSWGC Trigger: GCAGCCCCAGCTACCTGACAAGGTCTGCCGGGACCT...TTGTTCCTTTTTGACTAGTAGGCAGCATCCTTGCTGGGCAGAGCCATCGGCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
||
| 3UTR-3UTR CAA 90 bp | ACTCAGATGCTGCATTCCTGTCTCCCAGTCTGGCTTGGTACCCTAAGGGCCAGCCCTTCCGAGCAAGGGTaGCTGTCAGGCTCCATTCCG | + |
|
Preference number: 3 (lower is better) Translates to: TQMLHSCLPVWLGTLRASPSEQG*LSGSIP Trigger: CGGAATGGAGCCTGACAGCAACCCTTGCTCGGAAGG...GCTGGCCCTTAGGGTACCAAGCCAGACTGGGAGACAGGAATGCAGCATCTGAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR-3UTR CAA 90 bp | TCCCATTCTTGGCCTTCTCCATCCCCAGCTAACCCTCTCAGGTCTTCTGACAGAGATCTGGGCTGGGCCTaGGGGGTTGGAGAGCTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SHSWPSPSPANPLRSSDRDLGWA*GVGELC Trigger: GCAGAGCTCTCCAACCCCCAAGGCCCAGCCCAGATC...TCTGTCAGAAGACCTGAGAGGGTTAGCTGGGGATGGAGAAGGCCAAGAATGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR-3UTR CAA 90 bp | GACTTTACAAAGACAGAGACGCCGGAGAGTCAGGGAAACGGCAGGAGACAAAGAAGGTCCCGGCAGACCTaGTCAGGTAGCTGGGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: DFTKTETPESQGNGRRQRRSRQT*SGSWGC Trigger: GCAGCCCCAGCTACCTGACAAGGTCTGCCGGGACCT...TCTTTGTCTCCTGCCGTTTCCCTGACTCTCCGGCGTCTCTGTCTTTGTAAAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| 3UTR TCA 72 bp | ACCCTCTCAGGTCTTCTGACAGATGTCCCTGTTAACTaGATCCTTCTGGGTGCTCCCCTGGGGGCTGGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: TLSGLLTDVPVN*ILLGAPLGAGS Trigger: GGAGCCAGCCCCCAGGGGAGCACCCAGAAGGATTCAGTTAACAGGGACATCTGTCAGAAGACCTGAGAGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR TCA 72 bp | GGGCCTCTTGTCTGGGTTGGGAGCAGGAGGATGTGCTaGGCAGGCCATGCTTTGACTCAGATGCTGCATTCC | + |
|
Preference number: 3 (lower is better) Translates to: GPLVWVGSRRMC*AGHALTQMLHS Trigger: GGAATGCAGCATCTGAGTCAAAGCATGGCCTGCTCAGCACATCCTCCTGCTCCCAACCCAGACAAGAGGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR GCA 72 bp | GCAGGTCTCGCTCTACCAGCACACAGACTCAGTGTTTaGAGGCAGACGCTCAGGAGGACTGGTCCACTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: AGLALPAHRLSV*RQTLRRTGPLE Trigger: CTCTAGTGGACCAGTCCTCCTGAGCGTCTGCCTGCAAACACTGAGTCTGTGTGCTGGTAGAGCGAGACCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR GCA 72 bp | GGGGTACAGTTGGGAATGGAATCCAGTGATGCTCCTTaGGACGGGAGGCAGGTCTCGCTCTACCAGCACACA | + |
|
Preference number: 3 (lower is better) Translates to: GVQLGMESSDAP*DGRQVSLYQHT Trigger: TGTGTGCTGGTAGAGCGAGACCTGCCTCCCGTCGCAAGGAGCATCACTGGATTCCATTCCCAACTGTACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR GCA 72 bp | CTGGCCTGCCCTTCTGGAAGGGCCAAGGTTGCTGCATaGAGTGGAGTAGCAGAGACAAGAAGTACCGCATGG | + |
|
Preference number: 3 (lower is better) Translates to: LACPSGRAKVAA*SGVAETRSTAW Trigger: CCATGCGGTACTTCTTGTCTCTGCTACTCCACTGCATGCAGCAACCTTGGCCCTTCCAGAAGGGCAGGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR GCA 72 bp | TCACCCAGAGCTCTTTCCTACCAGTGGTCACTGGCCTaGCCTTCTGGAAGGGCCAAGGTTGCTGCATGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: SPRALSYQWSLA*PSGRAKVAACS Trigger: ACTGCATGCAGCAACCTTGGCCCTTCCAGAAGGGCAGGCCAGTGACCACTGGTAGGAAAGAGCTCTGGGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR GCA 72 bp | TCAAATCCCATGCACAGGAGACTCACTGTGGTCCAATaGCATCTGACAGCCGCCTTGAGGGGCTGTCGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SNPMHRRLTVVQ*HLTAALRGCRS Trigger: GGAGCGACAGCCCCTCAAGGCGGCTGTCAGATGGCATTGGACCACAGTGAGTCTCCTGTGCATGGGATTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR GCA 72 bp | TTTCTGGAGGTATCTGAACACCATGGTGGGGCAGAGTaGCAGGGGTGGGAGACGCCTGTTGCCTCATGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: FLEVSEHHGGAE*QGWETPVASWV Trigger: TACCCATGAGGCAACAGGCGTCTCCCACCCCTGGCACTCTGCCCCACCATGGTGTTCAGATACCTCCAGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR CCA 72 bp | TTCTCTGAAACCCACAAGAATACATCTCTGCGGCCTTaGAGGGCTGCGGCCGCGGGAACCTTCCAGGGAATG | + |
|
Preference number: 3 (lower is better) Translates to: FSETHKNTSLRP*RAAAAGTFQGM Trigger: CATTCCCTGGAAGGTTCCCGCGGCCGCAGCCCTCCAAGGCCGCAGAGATGTATTCTTGTGGGTTTCAGAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR CCA 72 bp | AGCTCTTTCCTACCAGTGGTCACTGGCCTGCCCTTCTaGAAGGGCCAAGGTTGCTGCATGCAGTGGAGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: SSFLPVVTGLPF*KGQGCCMQWSS Trigger: GCTACTCCACTGCATGCAGCAACCTTGGCCCTTCCAGAAGGGCAGGCCAGTGACCACTGGTAGGAAAGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR CCA 72 bp | CCAAGAAGCCATAAGGTCATGAGATGGGATCTGGGCTaGGCCTTGGGGGTTGGAGAGCTCTGCCTGCTACCT | + |
|
Preference number: 3 (lower is better) Translates to: PRSHKVMRWDLG*ALGVGELCLLP Trigger: AGGTAGCAGGCAGAGCTCTCCAACCCCCAAGGCCCAGCCCAGATCCCATCTCATGACCTTATGGCTTCTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR CCA 72 bp | ATGTCCCTGTTAACTGAATCCTTCTGGGTGCTCCCCTaGGGGCTGGCTCCTCTCACTTGTCAGGCAGTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: MSLLTESFWVLP*GLAPLTCQAVG Trigger: ACCCACTGCCTGACAAGTGAGAGGAGCCAGCCCCCAGGGGAGCACCCAGAAGGATTCAGTTAACAGGGACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR TCA 72 bp | ATTCTGAGTTGGAGGCTCTGGGGGAGCAAGGCTCTGTaGGAGCCACATCGCCTAGGGGGTTTGGTTCATGCT | + |
|
Preference number: 3 (lower is better) Translates to: ILSWRLWGSKAL*EPHRLGGLVHA Trigger: AGCATGAACCAAACCCCCTAGGCGATGTGGCTCTCACAGAGCCTTGCTCCCCCAGAGCCTCCAACTCAGAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR TCA 72 bp | ACCACACCTGGGAGGAGAAACACTGGCCTCCGCTCCTaGGCAGAGCTTAGGACTGAGCTGGAAAGTAGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: TTPGRRNTGLRS*AELRTELESSL Trigger: GAGACTACTTTCCAGCTCAGTCCTAAGCTCTGCTCAGGAGCGGAGGCCAGTGTTTCTCCTCCCAGGTGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR GCA 72 bp | GGGAATGAGATCTACCCCAGCCTTCCGAGCAAGGGTTaGTGTCAGGCTCCATTCCGGGCTACCCAACAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: GNEIYPSLPSKG*CQAPFRATQQN Trigger: ATTCTGTTGGGTAGCCCGGAATGGAGCCTGACAGCAACCCTTGCTCGGAAGGCTGGGGTAGATCTCATTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR CCA 72 bp | AGTTTGAAAGAAATGAGGGTAGCCACAGCAAGACACTaGGGGCAGGGTGATGGGGCCGAGATGGAGGTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: SLKEMRVATARH*GQGDGAEMEVG Trigger: CCCTACCTCCATCTCGGCCCCATCACCCTGCCCCCAGTGTCTTGCTGTGGCTACCCTCATTTCTTTCAAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR CCA 72 bp | AGCATCACCGTCACCCCCAGGACTGGAGACCAACATTaGGGATACAACACAGGGATATGTACAGCCGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SITVTPRTGDQH*GYNTGICTAGL Trigger: CAGCCCGGCTGTACATATCCCTGTGTTGTATCCCCAATGTTGGTCTCCAGTCCTGGGGGTGACGGTGATGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR CCA 72 bp | CTGGCCTCCGCTCCTGAGCAGAGCTTAGGACTGAGCTaGAAAGTAGTCTCTTGGGTAGTCCTCACGGAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LASAPEQSLGLS*KVVSWVVLTER Trigger: CCTTTCCGTGAGGACTACCCAAGAGACTACTTTCCAGCTCAGTCCTAAGCTCTGCTCAGGAGCGGAGGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR CCA 72 bp | TCATTCAGCCAGTTCCTATCCAGCTGTGACCACACCTaGGAGGAGAAACACTGGCCTCCGCTCCTGAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SFSQFLSSCDHT*EEKHWPPLLSR Trigger: TCTGCTCAGGAGCGGAGGCCAGTGTTTCTCCTCCCAGGTGTGGTCACAGCTGGATAGGAACTGGCTGAATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR CCA 72 bp | GCAGAGTGCCAGGGGTGGGAGACGCCTGTTGCCTCATaGGTAGATATTCCTAGAGCAGCCCTGGACAGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: AECQGWETPVAS*VDIPRAALDSL Trigger: TAAACTGTCCAGGGCTGCTCTAGGAATATCTACCCATGAGGCAACAGGCGTCTCCCACCCCTGGCACTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR CCA 72 bp | GTATCTGAACACCATGGTGGGGCAGAGTGCCAGGGGTaGGAGACGCCTGTTGCCTCATGGGTAGATATTCCT | + |
|
Preference number: 3 (lower is better) Translates to: VSEHHGGAECQG*ETPVASWVDIP Trigger: AGGAATATCTACCCATGAGGCAACAGGCGTCTCCCACCCCTGGCACTCTGCCCCACCATGGTGTTCAGATAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR CCA 72 bp | GGTCCCAAACACCCAGCAAATACTCCTTTCCATCCGTaGATTGAGGAGGGGCAGACCGGACAGGTCCAACTC | + |
|
Preference number: 3 (lower is better) Translates to: GPKHPANTPFHP*IEEGQTGQVQL Trigger: GAGTTGGACCTGTCCGGTCTGCCCCTCCTCAATCCACGGATGGAAAGGAGTATTTGCTGGGTGTTTGGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR-3UTR CAA 90 bp | ATCACAGTTTCTTCCCTTACTCATGAGGAATGGGGAGAACCCCACAGTCTTCTTGGTGGGGCCAGGAGGTaGGCAGGGCATGGCGTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: ITVSSLTHEEWGEPHSLLGGARR*AGHGVH Trigger: ATGGACGCCATGCCCTGCCAACCTCCTGGCCCCACC...AAGAAGACTGTGGGGTTCTCCCCATTCCTCATGAGTAAGGGAAGAAACTGTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| 3UTR TCA 72 bp | TGGATTGAGGAGGGGCAGACCGGACAGGTCCAACTCTaGGCTCCTCGGGATCCTAACAGAGAAGATGGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: WIEEGQTGQVQL*APRDPNREDGN Trigger: ATTCCCATCTTCTCTGTTAGGATCCCGAGGAGCTCAGAGTTGGACCTGTCCGGTCTGCCCCTCCTCAATCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR TCA 72 bp | CAAACACCCAGCAAATACTCCTTTCCATCCGTGGATTaGGGAGGGGCAGACCGGACAGGTCCAACTCTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: QTPSKYSFPSVD*GGADRTGPTLS Trigger: GCTCAGAGTTGGACCTGTCCGGTCTGCCCCTCCTCAATCCACGGATGGAAAGGAGTATTTGCTGGGTGTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR GCA 72 bp | TTGGAAATTGCAGTTGCTCTCATTATCTCTGCTGTGTaGTCGCTGATGCCCCTGGGGCTGGCTGGGCGATAC | + |
|
Preference number: 3 (lower is better) Translates to: LEIAVALIISAV*SLMPLGLAGRY Trigger: GTATCGCCCAGCCAGCCCCAGGGGCATCAGCGAGCACACAGCAGAGATAATGAGAGCAACTGCAATTTCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| 3UTR GCA 72 bp | CCTTCTCTCCCCAAGCAGCTCCAGATGTGTCACAGCTaGCACAAGAATGTATCCAACCTGCCCACGATGCCT | + |
|
Preference number: 3 (lower is better) Translates to: PSLPKQLQMCHS*HKNVSNLPTMP Trigger: AGGCATCGTGGGCAGGTTGGATACATTCTTGTGGCAGCTGTGACACATCTGGAGCTGCTTGGGGAGAGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR GCA 72 bp | AAACAAGGACTTTGCCCTAATTTCAGGGAACGTGGCTaGCTAACCCAGGCTTCCAGAGCTCGTGAGCAGGCG | + |
|
Preference number: 3 (lower is better) Translates to: KQGLCPNFRERG*LTQASRAREQA Trigger: CGCCTGCTCACGAGCTCTGGAAGCCTGGGTTAGGCAGCCACGTTCCCTGAAATTAGGGCAAAGTCCTTGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR CCA 72 bp | TGGGCTTCCTTTGGAGCGAGGTGTGTCTGGCATCCTTaGCTGGCTAGCTGGCAAGGTAGTTTACAGGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: WASFGARCVWHP*LASWQGSLQVC Trigger: ACACACCTGTAAACTACCTTGCCAGCTAGCCAGCCAAGGATGCCAGACACACCTCGCTCCAAAGGAAGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
||
| 3UTR CCA 72 bp | AGAGACAAGAAGTACCGCATGGGGTACAGTTGGGAATaGAATCCAGTGATGCTCCTTGCGACGGGAGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: RDKKYRMGYSWE*NPVMLLATGGR Trigger: CCTGCCTCCCGTCGCAAGGAGCATCACTGGATTCCATTCCCAACTGTACCCCATGCGGTACTTCTTGTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR CCA 72 bp | GACTCAGATGCTGCATTCCTGTCTCCCAGTCTGGCTTaGTACCCTAAGGGCCAGCTGAACGGAAGGAAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: DSDAAFLSPSLA*YPKGQLNGRKR Trigger: CCTTTTCCTTCCGTTCAGCTGGCCCTTAGGGTACCAAGCCAGACTGGGAGACAGGAATGCAGCATCTGAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR-3UTR CAA 90 bp | CCAAAAAGATTGTCACAGTTTCGTTTAGGAAGTGTGCTCTCTCTGGGAAGAGCAGGTGGGGCCAGGAGGTaGGCAGGGCATGGCGTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: PKRLSQFRLGSVLSLGRAGGARR*AGHGVH Trigger: ATGGACGCCATGCCCTGCCAACCTCCTGGCCCCACC...TGCTCTTCCCAGAGAGAGCACACTTCCTAAACGAAACTGTGACAATCTTTTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR GCA 72 bp | AATGGTCAGAGGCAAACGGGTTCATGGGAAGATGGCTaGACGTGTCAGAAGGAGGAGCTCAGGAAAGCGTTG | + |
|
Preference number: 3 (lower is better) Translates to: NGQRQTGSWEDG*TCQKEELRKAL Trigger: CAACGCTTTCCTGAGCTCCTCCTTCTGACACGTGCAGCCATCTTCCCATGAACCCGTTTGCCTCTGACCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR CCA 72 bp | CTGCGGCTTGCTGCAGCCACAACAGAGGTGCAGACCTaGACTGAGTCTGCTGTCTCTTTTTGTTTGGTACAG | + |
|
Preference number: 3 (lower is better) Translates to: LRLAAATTEVQT*TESAVSFCLVQ Trigger: CTGTACCAAACAAAAAGAGACAGCAGACTCAGTCCAGGTCTGCACCTCTGTTGTGGCTGCAGCAAGCCGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR CCA 72 bp | CTCTGCCTGCTACCTGCCCTCCCTACTCAGCCTTCCTaGTTTAGCTTTGGCCACAGAACAGGAAGTAAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: LCLLPALPTQPS*FSFGHRTGSKV Trigger: CACTTTACTTCCTGTTCTGTGGCCAAAGCTAAACCAGGAAGGCTGAGTAGGGAGGGCAGGTAGCAGGCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR CCA 72 bp | CTGTCCGTTAGGCTGAGGAGTACAAGAGTGGACAGATaGATGCCAGGACAGATGGGTGCCGGGATGATACTT | + |
|
Preference number: 3 (lower is better) Translates to: LSVRLRSTRVDR*MPGQMGAGMIL Trigger: AAGTATCATCCCGGCACCCATCTGTCCTGGCATCCATCTGTCCACTCTTGTACTCCTCAGCCTAACGGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR CCA 72 bp | GATGAATGGTCAGAGGCAAACGGGTTCATGGGAAGATaGCTGCACGTGTCAGAAGGAGGAGCTCAGGAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: DEWSEANGFMGR*LHVSEGGAQES Trigger: GCTTTCCTGAGCTCCTCCTTCTGACACGTGCAGCCATCTTCCCATGAACCCGTTTGCCTCTGACCATTCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTGGTGCCACTGTCTGACGCTCTGCGATGCTTTCTGAGGGTGCTTGCGATGGATCTGTGTTTTCTTTaGGAGAGAAGCAGTAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: LLVPLSDALRCFLRVLAMDLCFL*ERSSSS Trigger: GCTGCTACTGCTTCTCTCCAAAAGAAAACACAGATC...CATCGCAAGCACCCTCAGAAAGCATCGCAGAGCGTCAGACAGTGGCACCAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCTCCCCAAGCAGCTCCAGATGTGTCACAGCTGCCACAAGAATGTATCCAATATCCTCCAGCCTCCTaGCCTCAGGCGACACCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: FSPQAAPDVSQLPQECIQYPPAS*PQATPN Trigger: GTTAGGTGTCGCCTGAGGCAAGGAGGCTGGAGGATA...TTGGATACATTCTTGTGGCAGCTGTGACACATCTGGAGCTGCTTGGGGAGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR TCA 72 bp | AGCTTTGGCCACAGAACAGGAAGTAAAGTGGTATTCTaGGTTGGAGGCTCTGGGGGAGCAAGGCTCTGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SFGHRTGSKVVF*VGGSGGARLCE Trigger: CTCACAGAGCCTTGCTCCCCCAGAGCCTCCAACTCAGAATACCACTTTACTTCCTGTTCTGTGGCCAAAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR TCA 72 bp | ATGCCTACGGTAAGAACTCATATTTCTGGAGGTATCTaGACACCATGGTGGGGCAGAGTGCCAGGGGTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: MPTVRTHISGGI*TPWWGRVPGVG Trigger: TCCCACCCCTGGCACTCTGCCCCACCATGGTGTTCAGATACCTCCAGAAATATGAGTTCTTACCGTAGGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR TCA 72 bp | TGTCTCCCAGTCTGGCTTGGTACCCTAAGGGCCAGCTaGACGGAAGGAAAAGGAACAGAACACAAGACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: CLPVWLGTLRAS*TEGKGTEHKTE Trigger: CTCTGTCTTGTGTTCTGTTCCTTTTCCTTCCGTTCAGCTGGCCCTTAGGGTACCAAGCCAGACTGGGAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR GCA 72 bp | CGTGGCCTTGCTGCCGATGGCTCTGCCCAGCAAGGATaGTGCCTACTAGTCAAAAAGGAACAAAAGGTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: RGLAADGSAQQG*CLLVKKEQKVS Trigger: AGAAACCTTTTGTTCCTTTTTGACTAGTAGGCAGCATCCTTGCTGGGCAGAGCCATCGGCAGCAAGGCCACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
||
| 3UTR GCA 72 bp | GCTCTCTTCTGGACAGACTCCTGGAAACAAGGACTTTaGCCTAATTTCAGGGAACGTGGCTGCCTAACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: ALFWTDSWKQGL*PNFRERGCLTQ Trigger: CTGGGTTAGGCAGCCACGTTCCCTGAAATTAGGGCAAAGTCCTTGTTTCCAGGAGTCTGTCCAGAAGAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR CCA 72 bp | CTTCCTTTGGAGCGAGGTGTGTCTGGCATCCTTGGCTaGCTAGCTGGCAAGGTAGTTTACAGGTGTGTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LPLERGVSGILG*LAGKVVYRCVS Trigger: AGAAACACACCTGTAAACTACCTTGCCAGCTAGCCAGCCAAGGATGCCAGACACACCTCGCTCCAAAGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
||
| 3UTR CCA 72 bp | AGTAGCAGAGACAAGAAGTACCGCATGGGGTACAGTTaGGAATGGAATCCAGTGATGCTCCTTGCGACGGGA | + |
|
Preference number: 3 (lower is better) Translates to: SSRDKKYRMGYS*EWNPVMLLATG Trigger: TCCCGTCGCAAGGAGCATCACTGGATTCCATTCCCAACTGTACCCCATGCGGTACTTCTTGTCTCTGCTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR CCA 72 bp | CCTGGTTTAGCTTTGGCCACAGAACAGGAAGTAAAGTaGTATTCTGAGTTGGAGGCTCTGGGGGAGCAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: PGLALATEQEVK*YSELEALGEQG Trigger: GCCTTGCTCCCCCAGAGCCTCCAACTCAGAATACCACTTTACTTCCTGTTCTGTGGCCAAAGCTAAACCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR CCA 72 bp | CAGGATGAGCAAGGAGTTCCCAGGGGGACTTGTGAATaGTCCCAAACACCCAGCAAATACTCCTTTCCATCC | + |
|
Preference number: 3 (lower is better) Translates to: QDEQGVPRGTCE*SQTPSKYSFPS Trigger: GGATGGAAAGGAGTATTTGCTGGGTGTTTGGGACCATTCACAAGTCCCCCTGGGAACTCCTTGCTCATCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR GCA 72 bp | GGCCTTGCTGCCGATGGCTCTGCCCAGCAAGGATGCTaGCTACTAGTCAAAAAGGAACAAAAGGTTTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: GLAADGSAQQGC*LLVKKEQKVSS Trigger: AGAAGAAACCTTTTGTTCCTTTTTGACTAGTAGGCAGCATCCTTGCTGGGCAGAGCCATCGGCAGCAAGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
||
| 3UTR CCA 72 bp | GGAGCGAGGTGTGTCTGGCATCCTTGGCTGGCTAGCTaGCAAGGTAGTTTACAGGTGTGTTTCTTTTGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: GARCVWHPWLAS*QGSLQVCFFCL Trigger: TAAGCAAAAGAAACACACCTGTAAACTACCTTGCCAGCTAGCCAGCCAAGGATGCCAGACACACCTCGCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
||
| 3UTR CCA 72 bp | AAGCAGAGTAGAGGGCGTAGGAGGACCTGGTGTCTTTaGTACACTGATGGAGCTGACAGAACTCTGAGTACA | + |
|
Preference number: 3 (lower is better) Translates to: KQSRGRRRTWCL*YTDGADRTLST Trigger: TGTACTCAGAGTTCTGTCAGCTCCATCAGTGTACCAAAGACACCAGGTCCTCCTACGCCCTCTACTCTGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR-3UTR CAA 90 bp | ACAAAGACAGAGACGCCGGAGAGTCAGGGAAACGGCAGGAGACAAAGACACGGAACGGATGCAGTTCTGTaGGATCTGTGTTTTCTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: TKTETPESQGNGRRQRHGTDAVL*DLCFLL Trigger: CAAAAGAAAACACAGATCCAACAGAACTGCATCCGT...TCCGTGTCTTTGTCTCCTGCCGTTTCCCTGACTCTCCGGCGTCTCTGTCTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| 3UTR TCA 72 bp | GTTTCTAGGATTTGGGGACTTGTGCGAGTTGTTGGTTaGCTGTCCTGGGCTTTATCTGTGAGCTGTCTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: VSRIWGLVRVVG*LSWALSVSCLQ Trigger: CTGGAGACAGCTCACAGATAAAGCCCAGGACAGTCAACCAACAACTCGCACAAGTCCCCAAATCCTAGAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR TCA 72 bp | TGGACAGATGGATGCCAGGACAGATGGGTGCCGGGATaGTACTTTGGTGTCAGCCTAATGATTTATTTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: WTDGCQDRWVPG*YFGVSLMIYLE Trigger: CTCCAAATAAATCATTAGGCTGACACCAAAGTATCATCCCGGCACCCATCTGTCCTGGCATCCATCTGTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR CCA 72 bp | TGCAGACCTGGACTGAGTCTGCTGTCTCTTTTTGTTTaGTACAGGCATGAGCCTTCTTCCTTCATTTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: CRPGLSLLSLFV*YRHEPSSFISS Trigger: GGAGGAAATGAAGGAAGAAGGCTCATGCCTGTACCAAACAAAAAGAGACAGCAGACTCAGTCCAGGTCTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR GCA 72 bp | AACACAAGACAGAGGTTTCTAGGATTTGGGGACTTGTaGGAGTTGTTGGTTGACTGTCCTGGGCTTTATCTG | + |
|
Preference number: 3 (lower is better) Translates to: NTRQRFLGFGDL*ELLVDCPGLYL Trigger: CAGATAAAGCCCAGGACAGTCAACCAACAACTCGCACAAGTCCCCAAATCCTAGAAACCTCTGTCTTGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR CCA 72 bp | TTTGTTGTCTGTGGTGGGCCCTCTGTTCCTAAAAGGTaGGTAAGGCTGGTAAGGGTAAGAAAGGAGGTATTT | + |
|
Preference number: 3 (lower is better) Translates to: FVVCGGPSVPKR*VRLVRVRKEVF Trigger: AAATACCTCCTTTCTTACCCTTACCAGCCTTACCCACCTTTTAGGAACAGAGGGCCCACCACAGACAACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR-3UTR CAA 90 bp | GGCTCTGCCCAGCAAGGATGCTGCCTACTAGTCAAAAAGGAACAAAAGGTTTCTACGGATGCAGTTCTGTaGGATCTGTGTTTTCTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: GSAQQGCCLLVKKEQKVSTDAVL*DLCFLL Trigger: CAAAAGAAAACACAGATCCAACAGAACTGCATCCGT...AGAAACCTTTTGTTCCTTTTTGACTAGTAGGCAGCATCCTTGCTGGGCAGAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTGGCATCCTTGGCTGGCTAGCTGGCAAGGTAGTTTACAGGTGTGTTTCTTTTAGTTGGAAATTGCAGTaGCTCTCATTATCTCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SGILGWLAGKVVYRCVSFSWKLQ*LSLSLL Trigger: CAGCAGAGATAATGAGAGCAACTGCAATTTCCAACT...AAAAGAAACACACCTGTAAACTACCTTGCCAGCTAGCCAGCCAAGGATGCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
||
| 3UTR-3UTR CAA 90 bp | ATCACAGTTTCTTCCCTTACTCATGAGGAATGGGGAGAACCCCACAGTCTTCTTACGGATGCAGTTCTGTaGGATCTGTGTTTTCTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: ITVSSLTHEEWGEPHSLLTDAVL*DLCFLL Trigger: CAAAAGAAAACACAGATCCAACAGAACTGCATCCGT...AAGAAGACTGTGGGGTTCTCCCCATTCCTCATGAGTAAGGGAAGAAACTGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| 3UTR-3UTR CAA 90 bp | AACGTTCTGTTAAACAATGGTCATACAGCTGTGAAGAAACACCAGCCACCAAAGGATCTGTGTTTTCTTTaGGAGAGAAGCAGTAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: NVLLNNGHTAVKKHQPPKDLCFL*ERSSSS Trigger: GCTGCTACTGCTTCTCTCCAAAAGAAAACACAGATC...CTTTGGTGGCTGGTGTTTCTTCACAGCTGTATGACCATTGTTTAACAGAACGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| CDS-3UTR GCA 90 bp | CAACTGGTGGGCCACGGTGGGGCCAGGAGGTTGGCAGGGCATGGCGTCCATGGGCTTGCTGAGCTGCCGTaGCCCGCACGCCGGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QLVGHGGARRLAGHGVHGLAELP*PARRGQ Trigger: CTGCCCCCGGCGTGCGGGGCACGGCAGCTCAGCAAG...CCCATGGACGCCATGCCCTGCCAACCTCCTGGCCCCACCGTGGCCCACCAGTTG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | CAACTGGTGGGCCACGGTGGGGCCAGGAGGTTGGCAGGGCATGGCGTCCATGGGGCGATAGTGCGGGGGTaGGGGTGGCGTCGGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QLVGHGGARRLAGHGVHGAIVRG*GWRRVG Trigger: CCCCACCCGACGCCACCCCCACCCCCGCACTATCGC...CCCATGGACGCCATGCCCTGCCAACCTCCTGGCCCCACCGTGGCCCACCAGTTG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR GCA 90 bp | GCAACTGGTGGGCCACGGTGGGGCCAGGAGGTTGGCAGGGCATGGCGTCCATGGGGTGGGGCAGCCCATTaGTGGGGCTGCAGCGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ATGGPRWGQEVGRAWRPWGGAAH*WGCSAG Trigger: CCCAGCGCTGCAGCCCCAGCAATGGGCTGCCCCACC...CCATGGACGCCATGCCCTGCCAACCTCCTGGCCCCACCGTGGCCCACCAGTTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR GCA 90 bp | GGGCCAGGAGGTTGGCAGGGCATGGCGTCCATGGGCTGGGTGTCAGATCTGGAGCTTGCTGAGCTGCCGTaGCCCGCACGCCGGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GPGGWQGMASMGWVSDLELAELP*PARRGQ Trigger: CTGCCCCCGGCGTGCGGGGCACGGCAGCTCAGCAAG...CTCCAGATCTGACACCCAGCCCATGGACGCCATGCCCTGCCAACCTCCTGGCCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | ACACAGAGGGGACAGACAGCGGCGGAGCTGGCCACACTCCTGCTGGTGCCACTGCTGGGGCTGCAGCGCTaGGCGGGGCTCAGGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TQRGQTAAELATLLLVPLLGLQR*AGLRVQ Trigger: CTGCACCCTGAGCCCCGCCCAGCGCTGCAGCCCCAG...CAGTGGCACCAGCAGGAGTGTGGCCAGCTCCGCCGCTGTCTGTCCCCTCTGTGT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR TCA 90 bp | CAGAGAGACGGACACAGAGGGGACAGACAGCGGCGGAGCTGGCCACACTCCTGCTCACGGTCGGCCTCCTaGCACCGGCGCAGGACGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QRDGHRGDRQRRSWPHSCSRSAS*HRRRTV Trigger: CACCGTCCTGCGCCGGTGTCAGGAGGCCGACCGTGA...GCAGGAGTGTGGCCAGCTCCGCCGCTGTCTGTCCCCTCTGTGTCCGTCTCTCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR GCA 90 bp | CAGAGAGACGGACACAGAGGGGACAGACAGCGGCGGAGCTGGCCACACTCCTGCGGTGGGGCAGCCCATTaGTGGGGCTGCAGCGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QRDGHRGDRQRRSWPHSCGGAAH*WGCSAG Trigger: CCCAGCGCTGCAGCCCCAGCAATGGGCTGCCCCACC...GCAGGAGTGTGGCCAGCTCCGCCGCTGTCTGTCCCCTCTGTGTCCGTCTCTCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | GCAATGGCTCCAGGCAACTGGTGGGCCACGGTGGGGCCAGGAGGTTGGCAGGGCGGGGCAGGTGCTGTGTaGAGAGCGAGGCCGTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: AMAPGNWWATVGPGGWQGGAGAV*RARPWM Trigger: CATCCACGGCCTCGCTCTCCACACAGCACCTGCCCC...GCCCTGCCAACCTCCTGGCCCCACCGTGGCCCACCAGTTGCCTGGAGCCATTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | GCAATGGCTCCAGGCAACTGGTGGGCCACGGTGGGGCCAGGAGGTTGGCAGGGCCGCTGGGGCTGGCAGTaGCGTCAGGCTGTCCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: AMAPGNWWATVGPGGWQGRWGWQ*RQAVQV Trigger: TACCTGGACAGCCTGACGCCACTGCCAGCCCCAGCG...GCCCTGCCAACCTCCTGGCCCCACCGTGGCCCACCAGTTGCCTGGAGCCATTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGAGACGGACACAGAGGGGACAGACAGCGGCGGAGCTGGCCACACTCCTGCCCGAGCCGGCTTCGCTaGGGCTGGCAGTGGCGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QRDGHRGDRQRRSWPHSCPSRLR*GWQWRQ Trigger: CTGACGCCACTGCCAGCCCCAGCGAAGCCGGCTCGG...GCAGGAGTGTGGCCAGCTCCGCCGCTGTCTGTCCCCTCTGTGTCCGTCTCTCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR GCA 90 bp | CAGCGGCGGAGCTGGCCACACTCCTGCTGGTGCCACTGTCTGACGCTCTGCGATGCCAGGCGGGCACAGTaGAGGAGCTCACGCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QRRSWPHSCWCHCLTLCDARRAQ*RSSRCS Trigger: GCTGCAGCGTGAGCTCCTGCACTGTGCCCGCCTGGC...ATCGCAGAGCGTCAGACAGTGGCACCAGCAGGAGTGTGGCCAGCTCCGCCGCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | GGGGACCGATGGAAGGAGGTGCCTCCCTTGCATGTAGGGAACGCATGGACGGAGCTGGGGCTGCAGCGCTaGGCGGGGCTCAGGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GDRWKEVPPLHVGNAWTELGLQR*AGLRVQ Trigger: CTGCACCCTGAGCCCCGCCCAGCGCTGCAGCCCCAG...CTCCGTCCATGCGTTCCCTACATGCAAGGGAGGCACCTCCTTCCATCGGTCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | GGGCCAGGAGGTTGGCAGGGCATGGCGTCCATGGGCTGGGTGTCAGATCTGGAGCCGAGGCCTGTCGCTTaGCCTCCGCCAGGGCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: GPGGWQGMASMGWVSDLEPRPVA*PPPGLV Trigger: AACGAGCCCTGGCGGAGGCCAAGCGACAGGCCTCGG...CTCCAGATCTGACACCCAGCCCATGGACGCCATGCCCTGCCAACCTCCTGGCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR GCA 90 bp | ACACAGAGGGGACAGACAGCGGCGGAGCTGGCCACACTCCTGCTGGTGCCACTGTTAAGCTTGCTGAGCTaGCGTGCCCCGCACGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: TQRGQTAAELATLLLVPLLSLLS*RAPHAG Trigger: CCCGGCGTGCGGGGCACGGCAGCTCAGCAAGCTTAA...CAGTGGCACCAGCAGGAGTGTGGCCAGCTCCGCCGCTGTCTGTCCCCTCTGTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | GGGCCAGGAGGTTGGCAGGGCATGGCGTCCATGGGCTGGGTGTCAGATCTGGAGTGGAGAGCGAGGCCGTaGATGAGGTGGCTGGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: GPGGWQGMASMGWVSDLEWRARP*MRWLGR Trigger: ACGGCCCAGCCACCTCATCCACGGCCTCGCTCTCCA...CTCCAGATCTGACACCCAGCCCATGGACGCCATGCCCTGCCAACCTCCTGGCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGAGACGGACACAGAGGGGACAGACAGCGGCGGAGCTGGCCACACTCCTGCGGGGCAGGTGCTGTGTaGAGAGCGAGGCCGTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: QRDGHRGDRQRRSWPHSCGAGAV*RARPWM Trigger: CATCCACGGCCTCGCTCTCCACACAGCACCTGCCCC...GCAGGAGTGTGGCCAGCTCCGCCGCTGTCTGTCCCCTCTGTGTCCGTCTCTCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | GTGCTCGCTGATGCCCCTGGGGCTGGCTGGGCGATACAGCAACTCTGGATAGAAGGGGCAGCCCATTGCTaGGGCTGCAGCGCTGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VLADAPGAGWAIQQLWIEGAAHC*GCSAGR Trigger: CCGCCCAGCGCTGCAGCCCCAGCAATGGGCTGCCCC...TTCTATCCAGAGTTGCTGTATCGCCCAGCCAGCCCCAGGGGCATCAGCGAGCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | CAACTGGTGGGCCACGGTGGGGCCAGGAGGTTGGCAGGGCATGGCGTCCATGGGGAGTCCCGGAAATGGTaGGCCATGGCCATGTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QLVGHGGARRLAGHGVHGESRKW*AMAMSS Trigger: GGAGGACATGGCCATGGCCCACCATTTCCGGGACTC...CCCATGGACGCCATGCCCTGCCAACCTCCTGGCCCCACCGTGGCCCACCAGTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGAGACGGACACAGAGGGGACAGACAGCGGCGGAGCTGGCCACACTCCTGCCACTGCACGTCTCGCTaGCCTTGCGCCCGCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QRDGHRGDRQRRSWPHSCHCTSR*PCARSS Trigger: GGAACTGCGGGCGCAAGGCCAGCGAGACGTGCAGTG...GCAGGAGTGTGGCCAGCTCCGCCGCTGTCTGTCCCCTCTGTGTCCGTCTCTCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| 3UTR CAA 72 bp | GGGGCTTCTGGATGCGGTGCTGAGGGTCACGTGGCCTaGCTGCCGATGGCTCTGCCCAGCAAGGATGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GASGCGAEGHVA*LPMALPSKDAA Trigger: GGCAGCATCCTTGCTGGGCAGAGCCATCGGCAGCAAGGCCACGTGACCCTCAGCACCGCATCCAGAAGCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
||
| CDS-3UTR TCA 90 bp | GGGCCAGGAGGTTGGCAGGGCATGGCGTCCATGGGCTGGGTGTCAGATCTGGAGGTGGATGGCCGTGGGTaGGTGGCTGCTGCCGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GPGGWQGMASMGWVSDLEVDGRG*VAAAVH Trigger: ATGAACGGCAGCAGCCACTCACCCACGGCCATCCAC...CTCCAGATCTGACACCCAGCCCATGGACGCCATGCCCTGCCAACCTCCTGGCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR GCA 90 bp | CTGCTGGTGCCACTGTCTGACGCTCTGCGATGCTTTCTGAGGGTGCTTGCGATGCTTGCTGAGCTGCCGTaGCCCGCACGCCGGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLVPLSDALRCFLRVLAMLAELP*PARRGQ Trigger: CTGCCCCCGGCGTGCGGGGCACGGCAGCTCAGCAAG...CATCGCAAGCACCCTCAGAAAGCATCGCAGAGCGTCAGACAGTGGCACCAGCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | CTGAGGGTCACGTGGCCTTGCTGCCGATGGCTCTGCCCAGCAAGGATGCTGCCTTGGAGAGCGAGGCCGTaGATGAGGTGGCTGGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LRVTWPCCRWLCPARMLPWRARP*MRWLGR Trigger: ACGGCCCAGCCACCTCATCCACGGCCTCGCTCTCCA...AGGCAGCATCCTTGCTGGGCAGAGCCATCGGCAGCAAGGCCACGTGACCCTCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | CTGCTGGTGCCACTGTCTGACGCTCTGCGATGCTTTCTGAGGGTGCTTGCGATGGGGGCAGCCCATTGCTaGGGCTGCAGCGCTGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LLVPLSDALRCFLRVLAMGAAHC*GCSAGR Trigger: CCGCCCAGCGCTGCAGCCCCAGCAATGGGCTGCCCC...CATCGCAAGCACCCTCAGAAAGCATCGCAGAGCGTCAGACAGTGGCACCAGCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGACGCCGGAGAGTCAGGGAAACGGCAGGAGACAAAGACACGGAGAGACACGCGATAGTGCGGGGGTaGGGGTGGCGTCGGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QRRRRVRETAGDKDTERHAIVRG*GWRRVG Trigger: CCCCACCCGACGCCACCCCCACCCCCGCACTATCGC...GTGTCTCTCCGTGTCTTTGTCTCCTGCCGTTTCCCTGACTCTCCGGCGTCTCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | GCAACTGGTGGGCCACGGTGGGGCCAGGAGGTTGGCAGGGCATGGCGTCCATGGGGAAATGGTGGGCCATaGCCATGTCCTCCAGGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: ATGGPRWGQEVGRAWRPWGNGGP*PCPPGD Trigger: ATCGCCTGGAGGACATGGCCATGGCCCACCATTTCC...CCATGGACGCCATGCCCTGCCAACCTCCTGGCCCCACCGTGGCCCACCAGTTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| 3UTR CAA 72 bp | CTTCTGGGTGCTCCCCTGGGGGCTGGCTCCTCTCACTaGTCAGGCAGTGGGTGGGACCTGAGCTGTGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LLGAPLGAGSSH*SGSGWDLSCGV Trigger: GACACCACAGCTCAGGTCCCACCCACTGCCTGACAAGTGAGAGGAGCCAGCCCCCAGGGGAGCACCCAGAAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| CDS-3UTR TCA 90 bp | ACCACCCCATCACCCAGAGCTCTTTCCTACCAGTGGTCACTGGCCTGCCCTTCTTCACGGTCGGCCTCCTaGCACCGGCGCAGGACGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TTPSPRALSYQWSLACPSSRSAS*HRRRTV Trigger: CACCGTCCTGCGCCGGTGTCAGGAGGCCGACCGTGA...AGAAGGGCAGGCCAGTGACCACTGGTAGGAAAGAGCTCTGGGTGATGGGGTGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| CDS-3UTR GCA 90 bp | CAACTGGTGGGCCACGGTGGGGCCAGGAGGTTGGCAGGGCATGGCGTCCATGGGTGCAGGAGCTCACGCTaGAGCAGTGGAAGATTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QLVGHGGARRLAGHGVHGCRSSR*SSGRLA Trigger: GGCTAATCTTCCACTGCTGCAGCGTGAGCTCCTGCA...CCCATGGACGCCATGCCCTGCCAACCTCCTGGCCCCACCGTGGCCCACCAGTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | CAACTGGTGGGCCACGGTGGGGCCAGGAGGTTGGCAGGGCATGGCGTCCATGGGGCCTCAGTGGAAAGTTaGTGGCTTCCTGGAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QLVGHGGARRLAGHGVHGASVES*WLPGAW Trigger: CCAAGCTCCAGGAAGCCACCAACTTTCCACTGAGGC...CCCATGGACGCCATGCCCTGCCAACCTCCTGGCCCCACCGTGGCCCACCAGTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | CACAGAGAGACGGACACAGAGGGGACAGACAGCGGCGGAGCTGGCCACACTCCTGACCGCTTACTGAGGTaGTCGGGGTGCAGAGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HRETDTEGTDSGGAGHTPDRLLR*SGCRGS Trigger: GGACCCTCTGCACCCCGACCACCTCAGTAAGCGGTC...AGGAGTGTGGCCAGCTCCGCCGCTGTCTGTCCCCTCTGTGTCCGTCTCTCTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | CAGCGGCGGAGCTGGCCACACTCCTGCTGGTGCCACTGTCTGACGCTCTGCGATGAGTCCCGGAAATGGTaGGCCATGGCCATGTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QRRSWPHSCWCHCLTLCDESRKW*AMAMSS Trigger: GGAGGACATGGCCATGGCCCACCATTTCCGGGACTC...ATCGCAGAGCGTCAGACAGTGGCACCAGCAGGAGTGTGGCCAGCTCCGCCGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR GCA 90 bp | GCAGTTGCTCTCATTATCTCTGCTGTGTGCTCGCTGATGCCCCTGGGGCTGGCTGCCAGGCGGGCACAGTaGAGGAGCTCACGCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AVALIISAVCSLMPLGLAARRAQ*RSSRCS Trigger: GCTGCAGCGTGAGCTCCTGCACTGTGCCCGCCTGGC...AGCCAGCCCCAGGGGCATCAGCGAGCACACAGCAGAGATAATGAGAGCAACTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR GCA 90 bp | GGGCCAGGAGGTTGGCAGGGCATGGCGTCCATGGGCTGGGTGTCAGATCTGGAGCCGTGGGTGAGTGGCTaGTGCCGTTCATCAAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GPGGWQGMASMGWVSDLEPWVSG*CRSSRD Trigger: GTCTCTTGATGAACGGCAGCAGCCACTCACCCACGG...CTCCAGATCTGACACCCAGCCCATGGACGCCATGCCCTGCCAACCTCCTGGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | GTGCTCGCTGATGCCCCTGGGGCTGGCTGGGCGATACAGCAACTCTGGATAGAAATGGGGCACCGTGGATaGCCGTGGGTGAGTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VLADAPGAGWAIQQLWIEMGHRG*PWVSGC Trigger: GCAGCCACTCACCCACGGCCATCCACGGTGCCCCAT...TTCTATCCAGAGTTGCTGTATCGCCCAGCCAGCCCCAGGGGCATCAGCGAGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | GCAACTGGTGGGCCACGGTGGGGCCAGGAGGTTGGCAGGGCATGGCGTCCATGGGTGGTGATGAGTTCATaGGCTTTGCGCTCCGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: ATGGPRWGQEVGRAWRPWVVMSS*ALRSAS Trigger: TGATGCGGAGCGCAAAGCCCATGAACTCATCACCAC...CCATGGACGCCATGCCCTGCCAACCTCCTGGCCCCACCGTGGCCCACCAGTTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | CTGAGGGTCACGTGGCCTTGCTGCCGATGGCTCTGCCCAGCAAGGATGCTGCCTCCGTGGAAACGGCCATaGGGAAGAGACGTCGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LRVTWPCCRWLCPARMLPPWKRP*GRDVAG Trigger: ACCTGCGACGTCTCTTCCCCATGGCCGTTTCCACGG...AGGCAGCATCCTTGCTGGGCAGAGCCATCGGCAGCAAGGCCACGTGACCCTCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | GCAATGGCTCCAGGCAACTGGTGGGCCACGGTGGGGCCAGGAGGTTGGCAGGGCCACTTTAAGCAGCCGTaGAAACGGCCATGGGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: AMAPGNWWATVGPGGWQGHFKQP*KRPWGR Trigger: TCTTCCCCATGGCCGTTTCCACGGCTGCTTAAAGTG...GCCCTGCCAACCTCCTGGCCCCACCGTGGCCCACCAGTTGCCTGGAGCCATTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR GCA 90 bp | CAGGGACGTAGGTCATCAGGAATGCCACCTCAGGACTCCTGGCCCGGACTTCTAGGTGTGGACCGGGGCTaGGTCTTCACTTCAGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: QGRRSSGMPPQDSWPGLLGVDRG*VFTSAG Trigger: CCCGGCTGAAGTGAAGACGCAGCCCCGGTCCACACC...TAGAAGTCCGGGCCAGGAGTCCTGAGGTGGCATTCCTGATGACCTACGTCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| CDS-3UTR GCA 90 bp | GCTTCCTTTGGAGCGAGGTGTGTCTGGCATCCTTGGCTGGCTAGCTGGCAAGGTTTAAGCTTGCTGAGCTaGCGTGCCCCGCACGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: ASFGARCVWHPWLASWQGLSLLS*RAPHAG Trigger: CCCGGCGTGCGGGGCACGGCAGCTCAGCAAGCTTAA...ACCTTGCCAGCTAGCCAGCCAAGGATGCCAGACACACCTCGCTCCAAAGGAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
||
| CDS-3UTR GCA 90 bp | ACACAGAGGGGACAGACAGCGGCGGAGCTGGCCACACTCCTGCTGGTGCCACTGTGCAGGAGCTCACGCTaGAGCAGTGGAAGATTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TQRGQTAAELATLLLVPLCRSSR*SSGRLA Trigger: GGCTAATCTTCCACTGCTGCAGCGTGAGCTCCTGCA...CAGTGGCACCAGCAGGAGTGTGGCCAGCTCCGCCGCTGTCTGTCCCCTCTGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | GCAATGGCTCCAGGCAACTGGTGGGCCACGGTGGGGCCAGGAGGTTGGCAGGGCTCAGTGGAAAGTTGGTaGCTTCCTGGAGCTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AMAPGNWWATVGPGGWQGSVESW*LPGAWH Trigger: ATGCCAAGCTCCAGGAAGCCACCAACTTTCCACTGA...GCCCTGCCAACCTCCTGGCCCCACCGTGGCCCACCAGTTGCCTGGAGCCATTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | CAACTGGTGGGCCACGGTGGGGCCAGGAGGTTGGCAGGGCATGGCGTCCATGGGTCAGTGGAAAGTTGGTaGCTTCCTGGAGCTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QLVGHGGARRLAGHGVHGSVESW*LPGAWH Trigger: ATGCCAAGCTCCAGGAAGCCACCAACTTTCCACTGA...CCCATGGACGCCATGCCCTGCCAACCTCCTGGCCCCACCGTGGCCCACCAGTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGACGCCGGAGAGTCAGGGAAACGGCAGGAGACAAAGACACGGAGAGACACCAGGGGAGGTGGCGCTaGCGTCCAGCAGCAGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QRRRRVRETAGDKDTERHQGRWR*RPAAAV Trigger: AACAGCTGCTGCTGGACGCCAGCGCCACCTCCCCTG...GTGTCTCTCCGTGTCTTTGTCTCCTGCCGTTTCCCTGACTCTCCGGCGTCTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | CTGCTGGTGCCACTGTCTGACGCTCTGCGATGCTTTCTGAGGGTGCTTGCGATGAGTCGACAGGGGAGGTaGCGCTGGCGTCCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLVPLSDALRCFLRVLAMSRQGR*RWRPAA Trigger: TGCTGCTGGACGCCAGCGCCACCTCCCCTGTCGACT...CATCGCAAGCACCCTCAGAAAGCATCGCAGAGCGTCAGACAGTGGCACCAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | ACTCAGATGCTGCATTCCTGTCTCCCAGTCTGGCTTGGTACCCTAAGGGCCAGCCCGAGGCCTGTCGCTTaGCCTCCGCCAGGGCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: TQMLHSCLPVWLGTLRASPRPVA*PPPGLV Trigger: AACGAGCCCTGGCGGAGGCCAAGCGACAGGCCTCGG...GCTGGCCCTTAGGGTACCAAGCCAGACTGGGAGACAGGAATGCAGCATCTGAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | CTGCTGGTGCCACTGTCTGACGCTCTGCGATGCTTTCTGAGGGTGCTTGCGATGCGCTGGGGCTGGCAGTaGCGTCAGGCTGTCCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LLVPLSDALRCFLRVLAMRWGWQ*RQAVQV Trigger: TACCTGGACAGCCTGACGCCACTGCCAGCCCCAGCG...CATCGCAAGCACCCTCAGAAAGCATCGCAGAGCGTCAGACAGTGGCACCAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR TCA 90 bp | CAGCGGCGGAGCTGGCCACACTCCTGCTGGTGCCACTGTCTGACGCTCTGCGATCCCACTCGCGTTCTGTaGGCCTGTGATCAATCACTT | + |
|
Preference number: 4 (lower is better) Translates to: QRRSWPHSCWCHCLTLCDPTRVL*ACDQSL Trigger: AAGTGATTGATCACAGGCTCACAGAACGCGAGTGGG...ATCGCAGAGCGTCAGACAGTGGCACCAGCAGGAGTGTGGCCAGCTCCGCCGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR TCA 90 bp | GCAACTGGTGGGCCACGGTGGGGCCAGGAGGTTGGCAGGGCATGGCGTCCATGGTCTCCACCATGTCCATaGTGCAGTTCAGAAGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: ATGGPRWGQEVGRAWRPWSPPCP*CSSEDC Trigger: ACAGTCTTCTGAACTGCATCATGGACATGGTGGAGA...CCATGGACGCCATGCCCTGCCAACCTCCTGGCCCCACCGTGGCCCACCAGTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR GCA 90 bp | CAGCGGCGGAGCTGGCCACACTCCTGCTGGTGCCACTGTCTGACGCTCTGCGATCAGGTGAGATGTCACTaGCAAACTGCTGTAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QRRSWPHSCWCHCLTLCDQVRCH*QTAVGW Trigger: CCACCCTACAGCAGTTTGGCAGTGACATCTCACCTG...ATCGCAGAGCGTCAGACAGTGGCACCAGCAGGAGTGTGGCCAGCTCCGCCGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR GCA 90 bp | AGGTGTGTCTGGCATCCTTGGCTGGCTAGCTGGCAAGGTAGTTTACAGGTGTGTGGTGGGGCAGCCCATTaGTGGGGCTGCAGCGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RCVWHPWLASWQGSLQVCGGAAH*WGCSAG Trigger: CCCAGCGCTGCAGCCCCAGCAATGGGCTGCCCCACC...ACACACCTGTAAACTACCTTGCCAGCTAGCCAGCCAAGGATGCCAGACACACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
||
| CDS-3UTR GCA 90 bp | CAACTGGTGGGCCACGGTGGGGCCAGGAGGTTGGCAGGGCATGGCGTCCATGGGAGAAGACTGTTGAGGTaGTTCCATTCTTCTGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QLVGHGGARRLAGHGVHGRRLLR*FHSSAH Trigger: GTGGGCAGAAGAATGGAAGCACCTCAACAGTCTTCT...CCCATGGACGCCATGCCCTGCCAACCTCCTGGCCCCACCGTGGCCCACCAGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | GTGCTCGCTGATGCCCCTGGGGCTGGCTGGGCGATACAGCAACTCTGGATAGAAAGGTGTGAAGGAGGGTaGTCGTGTGGCTCCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VLADAPGAGWAIQQLWIERCEGG*SCGSLG Trigger: TCCCAGGGAGCCACACGACCACCCTCCTTCACACCT...TTCTATCCAGAGTTGCTGTATCGCCCAGCCAGCCCCAGGGGCATCAGCGAGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | GTGCTCGCTGATGCCCCTGGGGCTGGCTGGGCGATACAGCAACTCTGGATAGAATGCTGGGCCAGGTACTaGGCAGGTGTCTGTTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VLADAPGAGWAIQQLWIECWARY*AGVCLA Trigger: GGCCAAACAGACACCTGCCCAGTACCTGGCCCAGCA...TTCTATCCAGAGTTGCTGTATCGCCCAGCCAGCCCCAGGGGCATCAGCGAGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | GTGCTCGCTGATGCCCCTGGGGCTGGCTGGGCGATACAGCAACTCTGGATAGAAGAGTCCCGGAAATGGTaGGCCATGGCCATGTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VLADAPGAGWAIQQLWIEESRKW*AMAMSS Trigger: GGAGGACATGGCCATGGCCCACCATTTCCGGGACTC...TTCTATCCAGAGTTGCTGTATCGCCCAGCCAGCCCCAGGGGCATCAGCGAGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| 3UTR CAA 72 bp | CCCGGCTTAGCAACCCCACCTTATCCTCCAGCCTCCTaGCCTCAGGCGACACCTAACCCTTTCCAGCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PGLATPPYPPAS*PQATPNPFQPH Trigger: ATGGGGCTGGAAAGGGTTAGGTGTCGCCTGAGGCAAGGAGGCTGGAGGATAAGGTGGGGTTGCTAAGCCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR CAA 72 bp | CCCCAGCTCTGTGGAGAGCCCCAGGCAGACTGTAGGTaGAAACCAAGGGTAGGCTGCGGTTATGGCCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: PQLCGEPQADCR*KPRVGCGYGHP Trigger: TGGGTGGCCATAACCGCAGCCTACCCTTGGTTTCAACCTACAGTCTGCCTGGGGCTCTCCACAGAGCTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| CDS-3UTR TCA 90 bp | GTGCTCGCTGATGCCCCTGGGGCTGGCTGGGCGATACAGCAACTCTGGATAGAACTCTGGCCGCACACGTaGTGGTGTTTCTCCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VLADAPGAGWAIQQLWIELWPHT*WCFSQS Trigger: AGACTGGGAGAAACACCATCACGTGTGCGGCCAGAG...TTCTATCCAGAGTTGCTGTATCGCCCAGCCAGCCCCAGGGGCATCAGCGAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | ACAAAGACAGAGACGCCGGAGAGTCAGGGAAACGGCAGGAGACAAAGACACGGAAGTCGACAGGGGAGGTaGCGCTGGCGTCCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TKTETPESQGNGRRQRHGSRQGR*RWRPAA Trigger: TGCTGCTGGACGCCAGCGCCACCTCCCCTGTCGACT...TCCGTGTCTTTGTCTCCTGCCGTTTCCCTGACTCTCCGGCGTCTCTGTCTTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | ACAAAGACAGAGACGCCGGAGAGTCAGGGAAACGGCAGGAGACAAAGACACGGACACTGCACGTCTCGCTaGCCTTGCGCCCGCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TKTETPESQGNGRRQRHGHCTSR*PCARSS Trigger: GGAACTGCGGGCGCAAGGCCAGCGAGACGTGCAGTG...TCCGTGTCTTTGTCTCCTGCCGTTTCCCTGACTCTCCGGCGTCTCTGTCTTTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | GACTTTACAAAGACAGAGACGCCGGAGAGTCAGGGAAACGGCAGGAGACAAAGACCGAGCCGGCTTCGCTaGGGCTGGCAGTGGCGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: DFTKTETPESQGNGRRQRPSRLR*GWQWRQ Trigger: CTGACGCCACTGCCAGCCCCAGCGAAGCCGGCTCGG...TCTTTGTCTCCTGCCGTTTCCCTGACTCTCCGGCGTCTCTGTCTTTGTAAAGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGACGCCGGAGAGTCAGGGAAACGGCAGGAGACAAAGACACGGAGAGACACCCGTGGAAACGGCCATaGGGAAGAGACGTCGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QRRRRVRETAGDKDTERHPWKRP*GRDVAG Trigger: ACCTGCGACGTCTCTTCCCCATGGCCGTTTCCACGG...GTGTCTCTCCGTGTCTTTGTCTCCTGCCGTTTCCCTGACTCTCCGGCGTCTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | GTGCTCGCTGATGCCCCTGGGGCTGGCTGGGCGATACAGCAACTCTGGATAGAAATGGCCGTGGGTGAGTaGCTGCTGCCGTTCATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VLADAPGAGWAIQQLWIEMAVGE*LLPFIK Trigger: CTTGATGAACGGCAGCAGCCACTCACCCACGGCCAT...TTCTATCCAGAGTTGCTGTATCGCCCAGCCAGCCCCAGGGGCATCAGCGAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| 3UTR CAA 72 bp | AAGAGCACCCCGGTGTCAAGGGAGGCCAGCCCTGGCTaGCTCTCTTCTGGACAGACTCCTGGAAACAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KSTPVSREASPG*LSSGQTPGNKD Trigger: GTCCTTGTTTCCAGGAGTCTGTCCAGAAGAGAGCAAGCCAGGGCTGGCCTCCCTTGACACCGGGGTGCTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| CDS-3UTR TCA 90 bp | ACAAAAGGTTTCTTCTTGGCCCCACCCACCAAATCCCAGCATCCCAACACCCCCGTGGATGGCCGTGGGTaGGTGGCTGCTGCCGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TKGFFLAPPTKSQHPNTPVDGRG*VAAAVH Trigger: ATGAACGGCAGCAGCCACTCACCCACGGCCATCCAC...GGGGGTGTTGGGATGCTGGGATTTGGTGGGTGGGGCCAAGAAGAAACCTTTTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
||
| CDS-3UTR TCA 90 bp | ACACAGAGGGGACAGACAGCGGCGGAGCTGGCCACACTCCTGCTGGTGCCACTGTCTCCACCATGTCCATaGTGCAGTTCAGAAGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: TQRGQTAAELATLLLVPLSPPCP*CSSEDC Trigger: ACAGTCTTCTGAACTGCATCATGGACATGGTGGAGA...CAGTGGCACCAGCAGGAGTGTGGCCAGCTCCGCCGCTGTCTGTCCCCTCTGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR GCA 90 bp | TTACAAAGACAGAGACGCCGGAGAGTCAGGGAAACGGCAGGAGACAAAGACACGTTAAGCTTGCTGAGCTaGCGTGCCCCGCACGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LQRQRRRRVRETAGDKDTLSLLS*RAPHAG Trigger: CCCGGCGTGCGGGGCACGGCAGCTCAGCAAGCTTAA...CGTGTCTTTGTCTCCTGCCGTTTCCCTGACTCTCCGGCGTCTCTGTCTTTGTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR GCA 90 bp | GGGCCAGGAGGTTGGCAGGGCATGGCGTCCATGGGCTGGGTGTCAGATCTGGAGAGAAGACTGTTGAGGTaGTTCCATTCTTCTGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GPGGWQGMASMGWVSDLERRLLR*FHSSAH Trigger: GTGGGCAGAAGAATGGAAGCACCTCAACAGTCTTCT...CTCCAGATCTGACACCCAGCCCATGGACGCCATGCCCTGCCAACCTCCTGGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR GCA 90 bp | TCTGATGACAGAGAGATCATGTGGACTTTACAAAGACAGAGACGCCGGAGAGTCGGGACGAGAGGGCCCTaGCGAGCCGGCTTCGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SDDREIMWTLQRQRRRRVGTRGP*RAGFAG Trigger: CCCAGCGAAGCCGGCTCGGCAGGGCCCTCTCGTCCC...GACTCTCCGGCGTCTCTGTCTTTGTAAAGTCCACATGATCTCTCTGTCATCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR GCA 90 bp | GGCTCCATTCCGGGCTACCCAACAGAATCCATAGAACGTTCTGTTAAACAATGGGGGACGAGAGGGCCCTaGCGAGCCGGCTTCGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GSIPGYPTESIERSVKQWGTRGP*RAGFAG Trigger: CCCAGCGAAGCCGGCTCGGCAGGGCCCTCTCGTCCC...CCATTGTTTAACAGAACGTTCTATGGATTCTGTTGGGTAGCCCGGAATGGAGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | GTGCTCGCTGATGCCCCTGGGGCTGGCTGGGCGATACAGCAACTCTGGATAGAAGCCTCAGTGGAAAGTTaGTGGCTTCCTGGAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLADAPGAGWAIQQLWIEASVES*WLPGAW Trigger: CCAAGCTCCAGGAAGCCACCAACTTTCCACTGAGGC...TTCTATCCAGAGTTGCTGTATCGCCCAGCCAGCCCCAGGGGCATCAGCGAGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | CACAGAGAGACGGACACAGAGGGGACAGACAGCGGCGGAGCTGGCCACACTCCTAACAAACGGCCTCAGTaGAAAGTTGGTGGCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HRETDTEGTDSGGAGHTPNKRPQ*KVGGFL Trigger: CAGGAAGCCACCAACTTTCCACTGAGGCCGTTTGTT...AGGAGTGTGGCCAGCTCCGCCGCTGTCTGTCCCCTCTGTGTCCGTCTCTCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | TTTTATTTGGCAAACATCTCCTCGGTACTGATGCCACGGTTTGGGACCTCTGTGCTGGGGCTGCAGCGCTaGGCGGGGCTCAGGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FYLANISSVLMPRFGTSVLGLQR*AGLRVQ Trigger: CTGCACCCTGAGCCCCGCCCAGCGCTGCAGCCCCAG...CACAGAGGTCCCAAACCGTGGCATCAGTACCGAGGAGATGTTTGCCAAATAAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | CTGCTGGTGCCACTGTCTGACGCTCTGCGATGCTTTCTGAGGGTGCTTGCGATGGGAAATGGTGGGCCATaGCCATGTCCTCCAGGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLVPLSDALRCFLRVLAMGNGGP*PCPPGD Trigger: ATCGCCTGGAGGACATGGCCATGGCCCACCATTTCC...CATCGCAAGCACCCTCAGAAAGCATCGCAGAGCGTCAGACAGTGGCACCAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | GCATGCAGTGGAGTAGCAGAGACAAGAAGTACCGCATGGGGTACAGTTGGGAATCGGCTTCGCTGGGGCTaGCAGTGGCGTCAGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ACSGVAETRSTAWGTVGNRLRWG*QWRQAV Trigger: GACAGCCTGACGCCACTGCCAGCCCCAGCGAAGCCG...ATTCCCAACTGTACCCCATGCGGTACTTCTTGTCTCTGCTACTCCACTGCATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| CDS-3UTR TCA 90 bp | GCAGTTGCTCTCATTATCTCTGCTGTGTGCTCGCTGATGCCCCTGGGGCTGGCTCTCCCCGATCTCAGGTaGGATGTCACTGCCAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: AVALIISAVCSLMPLGLALPDLR*DVTAKL Trigger: CAGTTTGGCAGTGACATCTCACCTGAGATCGGGGAG...AGCCAGCCCCAGGGGCATCAGCGAGCACACAGCAGAGATAATGAGAGCAACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR TCA 90 bp | GCAGTTGCTCTCATTATCTCTGCTGTGTGCTCGCTGATGCCCCTGGGGCTGGCTCAGAGGGTCCCGGTCTaGTCCATTCTCTTTGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AVALIISAVCSLMPLGLAQRVPV*SILFGP Trigger: AGGACCAAAGAGAATGGATCAGACCGGGACCCTCTG...AGCCAGCCCCAGGGGCATCAGCGAGCACACAGCAGAGATAATGAGAGCAACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR TCA 90 bp | GCTGCCGATGGCTCTGCCCAGCAAGGATGCTGCCTACTAGTCAAAAAGGAACAATGCAGGACCGCTTACTaGGGTGGTCGGGGTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AADGSAQQGCCLLVKKEQCRTAY*GGRGAE Trigger: CTCTGCACCCCGACCACCTCAGTAAGCGGTCCTGCA...TTGTTCCTTTTTGACTAGTAGGCAGCATCCTTGCTGGGCAGAGCCATCGGCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
||
| CDS-3UTR TCA 90 bp | ACACAGAGGGGACAGACAGCGGCGGAGCTGGCCACACTCCTGCTGGTGCCACTGCGTTCTGTGAGCCTGTaGTCAATCACTTCTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TQRGQTAAELATLLLVPLRSVSL*SITSSC Trigger: ACAAGAAGAAGTGATTGATCACAGGCTCACAGAACG...CAGTGGCACCAGCAGGAGTGTGGCCAGCTCCGCCGCTGTCTGTCCCCTCTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR TCA 90 bp | CAGCGGCGGAGCTGGCCACACTCCTGCTGGTGCCACTGTCTGACGCTCTGCGATCGTTCTGTGAGCCTGTaGTCAATCACTTCTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QRRSWPHSCWCHCLTLCDRSVSL*SITSSC Trigger: ACAAGAAGAAGTGATTGATCACAGGCTCACAGAACG...ATCGCAGAGCGTCAGACAGTGGCACCAGCAGGAGTGTGGCCAGCTCCGCCGCTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR TCA 90 bp | TCTGATGACAGAGAGATCATGTGGACTTTACAAAGACAGAGACGCCGGAGAGTCTCACGGTCGGCCTCCTaGCACCGGCGCAGGACGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SDDREIMWTLQRQRRRRVSRSAS*HRRRTV Trigger: CACCGTCCTGCGCCGGTGTCAGGAGGCCGACCGTGA...GACTCTCCGGCGTCTCTGTCTTTGTAAAGTCCACATGATCTCTCTGTCATCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR GCA 90 bp | GCAGTTGCTCTCATTATCTCTGCTGTGTGCTCGCTGATGCCCCTGGGGCTGGCTTGGGTGAGTGGCTGCTaGCGTTCATCAGTGTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AVALIISAVCSLMPLGLAWVSGC*RSSVCE Trigger: CTCACACACTGATGAACGGCAGCAGCCACTCACCCA...AGCCAGCCCCAGGGGCATCAGCGAGCACACAGCAGAGATAATGAGAGCAACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006525.14 |
||
| CDS-3UTR CCA 90 bp | TGGACTTTACAAAGACAGAGACGCCGGAGAGTCAGGGAAACGGCAGGAGACAAACAGGGGAGGTGGCGCTaGCGTCCAGCAGCAGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: WTLQRQRRRRVRETAGDKQGRWR*RPAAAV Trigger: AACAGCTGCTGCTGGACGCCAGCGCCACCTCCCCTG...TTTGTCTCCTGCCGTTTCCCTGACTCTCCGGCGTCTCTGTCTTTGTAAAGTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | AAGACTGACATGCAAACCAACCCAGGGCGGAGAGACCATGAAGAAAATACTTTGGCGATAGTGCGGGGGTaGGGGTGGCGTCGGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KTDMQTNPGRRDHEENTLAIVRG*GWRRVG Trigger: CCCCACCCGACGCCACCCCCACCCCCGCACTATCGC...CAAAGTATTTTCTTCATGGTCTCTCCGCCCTGGGTTGGTTTGCATGTCAGTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | CACAGAGAGACGGACACAGAGGGGACAGACAGCGGCGGAGCTGGCCACACTCCTTCAAGAGACAGACCATaGACCACTTTAAGCAGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: HRETDTEGTDSGGAGHTPSRDRP*TTLSSR Trigger: ACGGCTGCTTAAAGTGGTCCATGGTCTGTCTCTTGA...AGGAGTGTGGCCAGCTCCGCCGCTGTCTGTCCCCTCTGTGTCCGTCTCTCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| 3UTR CAA 72 bp | GGCAGGTCTCGCTCTACCAGCACACAGACTCAGTGTTaGCAGGCAGACGCTCAGGAGGACTGGTCCACTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GRSRSTSTQTQC*QADAQEDWSTR Trigger: TCTAGTGGACCAGTCCTCCTGAGCGTCTGCCTGCAAACACTGAGTCTGTGTGCTGGTAGAGCGAGACCTGCC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| 3UTR CAA 72 bp | GCCCCATCTCCCTGCCACCCTGATTCTGCACTTGCCTaGACTCCTGAGCTCTGCCTAGCAGACATGGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: APSPCHPDSALA*TPELCLADMAS Trigger: AGATGCCATGTCTGCTAGGCAGAGCTCAGGAGTCAAGGCAAGTGCAGAATCAGGGTGGCAGGGAGATGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| CDS-3UTR TCA 90 bp | TGGACTTTACAAAGACAGAGACGCCGGAGAGTCAGGGAAACGGCAGGAGACAAATGCAGGACCGCTTACTaGGGTGGTCGGGGTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: WTLQRQRRRRVRETAGDKCRTAY*GGRGAE Trigger: CTCTGCACCCCGACCACCTCAGTAAGCGGTCCTGCA...TTTGTCTCCTGCCGTTTCCCTGACTCTCCGGCGTCTCTGTCTTTGTAAAGTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR GCA 90 bp | GGCTCTGCCCAGCAAGGATGCTGCCTACTAGTCAAAAAGGAACAAAAGGTTTCTGGCCCAGCACCAGTGTaGGCACGCGCTCCCCGATCT | + |
|
Preference number: 4 (lower is better) Translates to: GSAQQGCCLLVKKEQKVSGPAPV*ARAPRS Trigger: AGATCGGGGAGCGCGTGCGCACACTGGTGCTGGGCC...AGAAACCTTTTGTTCCTTTTTGACTAGTAGGCAGCATCCTTGCTGGGCAGAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
||
| CDS-3UTR GCA 90 bp | TTTTATTTGGCAAACATCTCCTCGGTACTGATGCCACGGTTTGGGACCTCTGTGGCCAGGCGGGCACAGTaGAGGAGCTCACGCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FYLANISSVLMPRFGTSVARRAQ*RSSRCS Trigger: GCTGCAGCGTGAGCTCCTGCACTGTGCCCGCCTGGC...CACAGAGGTCCCAAACCGTGGCATCAGTACCGAGGAGATGTTTGCCAAATAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | GTGCTCGCTGATGCCCCTGGGGCTGGCTGGGCGATACAGCAACTCTGGATAGAATGGCTTCCTGGAGCTTaGCATGAAACTCTTCGATCG | + |
|
Preference number: 4 (lower is better) Translates to: VLADAPGAGWAIQQLWIEWLPGA*HETLRS Trigger: CGATCGAAGAGTTTCATGCCAAGCTCCAGGAAGCCA...TTCTATCCAGAGTTGCTGTATCGCCCAGCCAGCCCCAGGGGCATCAGCGAGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCCTTTGGAGCGAGGTGTGTCTGGCATCCTTGGCTGGCTAGCTGGCAAGGTGTGGTGATGAGTTCATaGGCTTTGCGCTCCGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: ASFGARCVWHPWLASWQGVVMSS*ALRSAS Trigger: TGATGCGGAGCGCAAAGCCCATGAACTCATCACCAC...ACCTTGCCAGCTAGCCAGCCAAGGATGCCAGACACACCTCGCTCCAAAGGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGACGCCGGAGAGTCAGGGAAACGGCAGGAGACAAAGACACGGAGAGACACGTGGTGATGAGTTCATaGGCTTTGCGCTCCGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: QRRRRVRETAGDKDTERHVVMSS*ALRSAS Trigger: TGATGCGGAGCGCAAAGCCCATGAACTCATCACCAC...GTGTCTCTCCGTGTCTTTGTCTCCTGCCGTTTCCCTGACTCTCCGGCGTCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | GGCTCTGCCCAGCAAGGATGCTGCCTACTAGTCAAAAAGGAACAAAAGGTTTCTCGGCTTCGCTGGGGCTaGCAGTGGCGTCAGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GSAQQGCCLLVKKEQKVSRLRWG*QWRQAV Trigger: GACAGCCTGACGCCACTGCCAGCCCCAGCGAAGCCG...AGAAACCTTTTGTTCCTTTTTGACTAGTAGGCAGCATCCTTGCTGGGCAGAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
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| CDS-3UTR CCA 90 bp | ACAAAGACAGAGACGCCGGAGAGTCAGGGAAACGGCAGGAGACAAAGACACGGAATGGCCGTGGGTGAGTaGCTGCTGCCGTTCATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TKTETPESQGNGRRQRHGMAVGE*LLPFIK Trigger: CTTGATGAACGGCAGCAGCCACTCACCCACGGCCAT...TCCGTGTCTTTGTCTCCTGCCGTTTCCCTGACTCTCCGGCGTCTCTGTCTTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR TCA 90 bp | ACAAAGACAGAGACGCCGGAGAGTCAGGGAAACGGCAGGAGACAAAGACACGGACAGAGGGTCCCGGTCTaGTCCATTCTCTTTGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TKTETPESQGNGRRQRHGQRVPV*SILFGP Trigger: AGGACCAAAGAGAATGGATCAGACCGGGACCCTCTG...TCCGTGTCTTTGTCTCCTGCCGTTTCCCTGACTCTCCGGCGTCTCTGTCTTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR GCA 90 bp | ACAAAGACAGAGACGCCGGAGAGTCAGGGAAACGGCAGGAGACAAAGACACGGAGGAGTCTGGCATTGCTaGAGCCTTCTCCTTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TKTETPESQGNGRRQRHGGVWHC*SLLLPV Trigger: CACAGGAAGGAGAAGGCTGCAGCAATGCCAGACTCC...TCCGTGTCTTTGTCTCCTGCCGTTTCCCTGACTCTCCGGCGTCTCTGTCTTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| CDS-3UTR GCA 90 bp | GCTGCCGATGGCTCTGCCCAGCAAGGATGCTGCCTACTAGTCAAAAAGGAACAACGGGGAGTCTGGCATTaGTGCAGCCTTCTCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AADGSAQQGCCLLVKKEQRGVWH*CSLLLP Trigger: AGGAAGGAGAAGGCTGCAGCAATGCCAGACTCCCCG...TTGTTCCTTTTTGACTAGTAGGCAGCATCCTTGCTGGGCAGAGCCATCGGCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | TCCCTTCTCTCCCCAAGCAGCTCCAGATGTGTCACAGCTGCCACAAGAATGTATAGGTGTGAAGGAGGGTaGTCGTGTGGCTCCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLLSPSSSRCVTAATRMYRCEGG*SCGSLG Trigger: TCCCAGGGAGCCACACGACCACCCTCCTTCACACCT...ATACATTCTTGTGGCAGCTGTGACACATCTGGAGCTGCTTGGGGAGAGAAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | AGGTGTGTCTGGCATCCTTGGCTGGCTAGCTGGCAAGGTAGTTTACAGGTGTGTATGGCCGTGGGTGAGTaGCTGCTGCCGTTCATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RCVWHPWLASWQGSLQVCMAVGE*LLPFIS Trigger: ACTGATGAACGGCAGCAGCCACTCACCCACGGCCAT...ACACACCTGTAAACTACCTTGCCAGCTAGCCAGCCAAGGATGCCAGACACACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006525.14 |
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| CDS-3UTR CCA 90 bp | TCTGGCATCCTTGGCTGGCTAGCTGGCAAGGTAGTTTACAGGTGTGTTTCTTTTCACCGTGGATGGCCGTaGGTGAGTGGCTGCTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SGILGWLAGKVVYRCVSFHRGWP*VSGCCR Trigger: ACGGCAGCAGCCACTCACCCACGGCCATCCACGGTG...AAAAGAAACACACCTGTAAACTACCTTGCCAGCTAGCCAGCCAAGGATGCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | TGGCTCTGCCCAGCAAGGATGCTGCCTACTAGTCAAAAAGGAACAAAAGGTTTCATGGGGCACCGTGGATaGCCGTGGGTGAGTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WLCPARMLPTSQKGTKGFMGHRG*PWVSGC Trigger: GCAGCCACTCACCCACGGCCATCCACGGTGCCCCAT...GAAACCTTTTGTTCCTTTTTGACTAGTAGGCAGCATCCTTGCTGGGCAGAGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
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| CDS-3UTR CCA 90 bp | GGCTCCATTCCGGGCTACCCAACAGAATCCATAGAACGTTCTGTTAAACAATGGGGGGCAGGTGCTGTGTaGAGAGCGAGGCCGTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: GSIPGYPTESIERSVKQWGAGAV*RARPWM Trigger: CATCCACGGCCTCGCTCTCCACACAGCACCTGCCCC...CCATTGTTTAACAGAACGTTCTATGGATTCTGTTGGGTAGCCCGGAATGGAGCC 56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| CDS-3UTR CCA 90 bp | TCCCTTCTCTCCCCAAGCAGCTCCAGATGTGTCACAGCTGCCACAAGAATGTATTGCTGGGCCAGGTACTaGGCAGGTGTCTGTTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLLSPSSSRCVTAATRMYCWARY*AGVCLA Trigger: GGCCAAACAGACACCTGCCCAGTACCTGGCCCAGCA...ATACATTCTTGTGGCAGCTGTGACACATCTGGAGCTGCTTGGGGAGAGAAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | ATGTGTAGGGCATGGAACACAGCTTTTCATGAACAAAACATCCAGTACTCTCCTGGGGCAGCCCATTGCTaGGGCTGCAGCGCTGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: MCRAWNTAFHEQNIQYSPGAAHC*GCSAGR Trigger: CCGCCCAGCGCTGCAGCCCCAGCAATGGGCTGCCCC...AGGAGAGTACTGGATGTTTTGTTCATGAAAAGCTGTGTTCCATGCCCTACACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | GGCTCCATTCCGGGCTACCCAACAGAATCCATAGAACGTTCTGTTAAACAATGGCACTGCACGTCTCGCTaGCCTTGCGCCCGCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSIPGYPTESIERSVKQWHCTSR*PCARSS Trigger: GGAACTGCGGGCGCAAGGCCAGCGAGACGTGCAGTG...CCATTGTTTAACAGAACGTTCTATGGATTCTGTTGGGTAGCCCGGAATGGAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| CDS-3UTR CCA 90 bp | GGCTCTGCCCAGCAAGGATGCTGCCTACTAGTCAAAAAGGAACAAAAGGTTTCTCGCTGGGGCTGGCAGTaGCGTCAGGCTGTCCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GSAQQGCCLLVKKEQKVSRWGWQ*RQAVQV Trigger: TACCTGGACAGCCTGACGCCACTGCCAGCCCCAGCG...AGAAACCTTTTGTTCCTTTTTGACTAGTAGGCAGCATCCTTGCTGGGCAGAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
||
| 3UTR CAA 72 bp | AAGCATCACCGTCACCCCCAGGACTGGAGACCAACATaGGGGATACAACACAGGGATATGTACAGCCGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KHHRHPQDWRPT*GIQHRDMYSRA Trigger: AGCCCGGCTGTACATATCCCTGTGTTGTATCCCCAATGTTGGTCTCCAGTCCTGGGGGTGACGGTGATGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR CAA 72 bp | CCAAACACCCAGCAAATACTCCTTTCCATCCGTGGATaGAGGAGGGGCAGACCGGACAGGTCCAACTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PNTQQILLSIRG*RRGRPDRSNSE Trigger: CTCAGAGTTGGACCTGTCCGGTCTGCCCCTCCTCAATCCACGGATGGAAAGGAGTATTTGCTGGGTGTTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| CDS-3UTR TCA 90 bp | GCTGCCGATGGCTCTGCCCAGCAAGGATGCTGCCTACTAGTCAAAAAGGAACAACAGAGGGTCCCGGTCTaGTCCATTCTCTTTGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AADGSAQQGCCLLVKKEQQRVPV*SILFGP Trigger: AGGACCAAAGAGAATGGATCAGACCGGGACCCTCTG...TTGTTCCTTTTTGACTAGTAGGCAGCATCCTTGCTGGGCAGAGCCATCGGCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
||
| CDS-3UTR GCA 90 bp | AAGACTGACATGCAAACCAACCCAGGGCGGAGAGACCATGAAGAAAATACTTTGGGTGTGGACCGGGGCTaGGTCTTCACTTCAGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: KTDMQTNPGRRDHEENTLGVDRG*VFTSAG Trigger: CCCGGCTGAAGTGAAGACGCAGCCCCGGTCCACACC...CAAAGTATTTTCTTCATGGTCTCTCCGCCCTGGGTTGGTTTGCATGTCAGTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
||
| CDS-3UTR GCA 90 bp | CAACTAGGTTTCTCTGATGACAGAGAGATCATGTGGACTTTACAAAGACAGAGAGGGACGAGAGGGCCCTaGCGAGCCGGCTTCGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QLGFSDDREIMWTLQRQRGTRGP*RAGFAG Trigger: CCCAGCGAAGCCGGCTCGGCAGGGCCCTCTCGTCCC...TCTCTGTCTTTGTAAAGTCCACATGATCTCTCTGTCATCAGAGAAACCTAGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | AAGACTGACATGCAAACCAACCCAGGGCGGAGAGACCATGAAGAAAATACTTTGATGGGGCACCGTGGATaGCCGTGGGTGAGTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KTDMQTNPGRRDHEENTLMGHRG*PWVSGC Trigger: GCAGCCACTCACCCACGGCCATCCACGGTGCCCCAT...CAAAGTATTTTCTTCATGGTCTCTCCGCCCTGGGTTGGTTTGCATGTCAGTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | GGTTTCTCTGATGACAGAGAGATCATGTGGACTTTACAAAGACAGAGACGCCGGGACCGCTTACTGAGGTaGTCGGGGTGCAGAGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GFSDDREIMWTLQRQRRRDRLLR*SGCRGS Trigger: GGACCCTCTGCACCCCGACCACCTCAGTAAGCGGTC...CCGGCGTCTCTGTCTTTGTAAAGTCCACATGATCTCTCTGTCATCAGAGAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR TCA 90 bp | AAGACTGACATGCAAACCAACCCAGGGCGGAGAGACCATGAAGAAAATACTTTGGTGGATGGCCGTGGGTaGGTGGCTGCTGCCGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KTDMQTNPGRRDHEENTLVDGRG*VAAAVH Trigger: ATGAACGGCAGCAGCCACTCACCCACGGCCATCCAC...CAAAGTATTTTCTTCATGGTCTCTCCGCCCTGGGTTGGTTTGCATGTCAGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
||
| CDS-3UTR TCA 90 bp | GCAGTTGCTCTCATTATCTCTGCTGTGTGCTCGCTGATGCCCCTGGGGCTGGCTCGTTCTGTGAGCCTGTaGTCAATCACTTCTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AVALIISAVCSLMPLGLARSVSL*SITSSC Trigger: ACAAGAAGAAGTGATTGATCACAGGCTCACAGAACG...AGCCAGCCCCAGGGGCATCAGCGAGCACACAGCAGAGATAATGAGAGCAACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR TCA 90 bp | TTCTCTCCCCAAGCAGCTCCAGATGTGTCACAGCTGCCACAAGAATGTATCCAACTCTGGCCGCACACGTaGTGGTGTTTCTCCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FSPQAAPDVSQLPQECIQLWPHT*WCFSQS Trigger: AGACTGGGAGAAACACCATCACGTGTGCGGCCAGAG...TTGGATACATTCTTGTGGCAGCTGTGACACATCTGGAGCTGCTTGGGGAGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| CDS-3UTR GCA 90 bp | ACTCAGATGCTGCATTCCTGTCTCCCAGTCTGGCTTGGTACCCTAAGGGCCAGCATGTCACTGCCAAACTaGTGTAGGGTGGTGAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TQMLHSCLPVWLGTLRASMSLPN*CRVVRK Trigger: TTTCCTCACCACCCTACAGCAGTTTGGCAGTGACAT...GCTGGCCCTTAGGGTACCAAGCCAGACTGGGAGACAGGAATGCAGCATCTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | TCTGATGACAGAGAGATCATGTGGACTTTACAAAGACAGAGACGCCGGAGAGTCAGGTGTGAAGGAGGGTaGTCGTGTGGCTCCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SDDREIMWTLQRQRRRRVRCEGG*SCGSLG Trigger: TCCCAGGGAGCCACACGACCACCCTCCTTCACACCT...GACTCTCCGGCGTCTCTGTCTTTGTAAAGTCCACATGATCTCTCTGTCATCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | TCCCTTCTCTCCCCAAGCAGCTCCAGATGTGTCACAGCTGCCACAAGAATGTATGCCTCAGTGGAAAGTTaGTGGCTTCCTGGAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLLSPSSSRCVTAATRMYASVES*WLPGAW Trigger: CCAAGCTCCAGGAAGCCACCAACTTTCCACTGAGGC...ATACATTCTTGTGGCAGCTGTGACACATCTGGAGCTGCTTGGGGAGAGAAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | TTTTATTTGGCAAACATCTCCTCGGTACTGATGCCACGGTTTGGGACCTCTGTGCCCCACTCTCCAGAGTaGTGGTGGATGCCTGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: FYLANISSVLMPRFGTSVPHSPE*WWMPGT Trigger: TGTCCCAGGCATCCACCACCACTCTGGAGAGTGGGG...CACAGAGGTCCCAAACCGTGGCATCAGTACCGAGGAGATGTTTGCCAAATAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| CDS-3UTR GCA 90 bp | ACAAAGACAGAGACGCCGGAGAGTCAGGGAAACGGCAGGAGACAAAGACACGGAATGTCACTGCCAAACTaGTGTAGGGTGGTGAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TKTETPESQGNGRRQRHGMSLPN*CRVVRK Trigger: TTTCCTCACCACCCTACAGCAGTTTGGCAGTGACAT...TCCGTGTCTTTGTCTCCTGCCGTTTCCCTGACTCTCCGGCGTCTCTGTCTTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR GCA 90 bp | CAACTAGGTTTCTCTGATGACAGAGAGATCATGTGGACTTTACAAAGACAGAGAGGCCCAGCACCAGTGTaGGCACGCGCTCCCCGATCT | + |
|
Preference number: 4 (lower is better) Translates to: QLGFSDDREIMWTLQRQRGPAPV*ARAPRS Trigger: AGATCGGGGAGCGCGTGCGCACACTGGTGCTGGGCC...TCTCTGTCTTTGTAAAGTCCACATGATCTCTCTGTCATCAGAGAAACCTAGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR GCA 90 bp | GACTTTACAAAGACAGAGACGCCGGAGAGTCAGGGAAACGGCAGGAGACAAAGATGGGTGAGTGGCTGCTaGCGTTCATCAAGAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: DFTKTETPESQGNGRRQRWVSGC*RSSRDR Trigger: TCTGTCTCTTGATGAACGGCAGCAGCCACTCACCCA...TCTTTGTCTCCTGCCGTTTCCCTGACTCTCCGGCGTCTCTGTCTTTGTAAAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | CAACTAGGTTTCTCTGATGACAGAGAGATCATGTGGACTTTACAAAGACAGAGACCGAGGCCTGTCGCTTaGCCTCCGCCAGGGCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: QLGFSDDREIMWTLQRQRPRPVA*PPPGLV Trigger: AACGAGCCCTGGCGGAGGCCAAGCGACAGGCCTCGG...TCTCTGTCTTTGTAAAGTCCACATGATCTCTCTGTCATCAGAGAAACCTAGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | AAAAGCTACCAACTAGGTTTCTCTGATGACAGAGAGATCATGTGGACTTTACAACCGAGCCGGCTTCGCTaGGGCTGGCAGTGGCGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KSYQLGFSDDREIMWTLQPSRLR*GWQWRQ Trigger: CTGACGCCACTGCCAGCCCCAGCGAAGCCGGCTCGG...TTGTAAAGTCCACATGATCTCTCTGTCATCAGAGAAACCTAGTTGGTAGCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | TGGACTTTACAAAGACAGAGACGCCGGAGAGTCAGGGAAACGGCAGGAGACAAACACTTTAAGCAGCCGTaGAAACGGCCATGGGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: WTLQRQRRRRVRETAGDKHFKQP*KRPWGR Trigger: TCTTCCCCATGGCCGTTTCCACGGCTGCTTAAAGTG...TTTGTCTCCTGCCGTTTCCCTGACTCTCCGGCGTCTCTGTCTTTGTAAAGTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | GCATGCAGTGGAGTAGCAGAGACAAGAAGTACCGCATGGGGTACAGTTGGGAATCTCCTTCCTGTGAGCTaGGCTTCCATTCTGAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: ACSGVAETRSTAWGTVGNLLPVS*ASILKT Trigger: GGTCTTCAGAATGGAAGCCCAGCTCACAGGAAGGAG...ATTCCCAACTGTACCCCATGCGGTACTTCTTGTCTCTGCTACTCCACTGCATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| CDS-3UTR TCA 90 bp | TCTGATGACAGAGAGATCATGTGGACTTTACAAAGACAGAGACGCCGGAGAGTCCCGTTCATCAGTGTGTaGGGTGTGAAGGAGGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SDDREIMWTLQRQRRRRVPFISV*GVKEGG Trigger: ACCACCCTCCTTCACACCTCACACACTGATGAACGG...GACTCTCCGGCGTCTCTGTCTTTGTAAAGTCCACATGATCTCTCTGTCATCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006525.14 |
||
| CDS-3UTR TCA 90 bp | TTACAAAGACAGAGACGCCGGAGAGTCAGGGAAACGGCAGGAGACAAAGACACGTCTCCACCATGTCCATaGTGCAGTTCAGAAGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LQRQRRRRVRETAGDKDTSPPCP*CSSEDC Trigger: ACAGTCTTCTGAACTGCATCATGGACATGGTGGAGA...CGTGTCTTTGTCTCCTGCCGTTTCCCTGACTCTCCGGCGTCTCTGTCTTTGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR TCA 90 bp | ATCACAGTTTCTTCCCTTACTCATGAGGAATGGGGAGAACCCCACAGTCTTCTTCTCTGGCCGCACACGTaGTGGTGTTTCTCCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ITVSSLTHEEWGEPHSLLLWPHT*WCFSQS Trigger: AGACTGGGAGAAACACCATCACGTGTGCGGCCAGAG...AAGAAGACTGTGGGGTTCTCCCCATTCCTCATGAGTAAGGGAAGAAACTGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR GCA 90 bp | GGTGTGTCTGGCATCCTTGGCTGGCTAGCTGGCAAGGTAGTTTACAGGTGTGTTATGTCACTGCCAAACTaGTGTAGGGTGGTGAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GVSGILGWLAGKVVYRCVMSLPN*CRVVRK Trigger: TTTCCTCACCACCCTACAGCAGTTTGGCAGTGACAT...AACACACCTGTAAACTACCTTGCCAGCTAGCCAGCCAAGGATGCCAGACACACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | CAACTAGGTTTCTCTGATGACAGAGAGATCATGTGGACTTTACAAAGACAGAGATGGAGAGCGAGGCCGTaGATGAGGTGGCTGGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: QLGFSDDREIMWTLQRQRWRARP*MRWLGR Trigger: ACGGCCCAGCCACCTCATCCACGGCCTCGCTCTCCA...TCTCTGTCTTTGTAAAGTCCACATGATCTCTCTGTCATCAGAGAAACCTAGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | GACTTTACAAAGACAGAGACGCCGGAGAGTCAGGGAAACGGCAGGAGACAAAGATGGCTTCCTGGAGCTTaGCATGAAACTCTTCGATCG | + |
|
Preference number: 4 (lower is better) Translates to: DFTKTETPESQGNGRRQRWLPGA*HETLRS Trigger: CGATCGAAGAGTTTCATGCCAAGCTCCAGGAAGCCA...TCTTTGTCTCCTGCCGTTTCCCTGACTCTCCGGCGTCTCTGTCTTTGTAAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | TGGACTTTACAAAGACAGAGACGCCGGAGAGTCAGGGAAACGGCAGGAGACAAATGGCTTCCTGGAGCTTaGCATGAAACTCTTCGATCG | + |
|
Preference number: 4 (lower is better) Translates to: WTLQRQRRRRVRETAGDKWLPGA*HETLRS Trigger: CGATCGAAGAGTTTCATGCCAAGCTCCAGGAAGCCA...TTTGTCTCCTGCCGTTTCCCTGACTCTCCGGCGTCTCTGTCTTTGTAAAGTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | GCATGCAGTGGAGTAGCAGAGACAAGAAGTACCGCATGGGGTACAGTTGGGAATTCAGTGGAAAGTTGGTaGCTTCCTGGAGCTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ACSGVAETRSTAWGTVGNSVESW*LPGAWH Trigger: ATGCCAAGCTCCAGGAAGCCACCAACTTTCCACTGA...ATTCCCAACTGTACCCCATGCGGTACTTCTTGTCTCTGCTACTCCACTGCATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | GCATGCAGTGGAGTAGCAGAGACAAGAAGTACCGCATGGGGTACAGTTGGGAATAACAAACGGCCTCAGTaGAAAGTTGGTGGCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ACSGVAETRSTAWGTVGNNKRPQ*KVGGFL Trigger: CAGGAAGCCACCAACTTTCCACTGAGGCCGTTTGTT...ATTCCCAACTGTACCCCATGCGGTACTTCTTGTCTCTGCTACTCCACTGCATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | CAACTAGGTTTCTCTGATGACAGAGAGATCATGTGGACTTTACAAAGACAGAGACAGGGGAGGTGGCGCTaGCGTCCAGCAGCAGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QLGFSDDREIMWTLQRQRQGRWR*RPAAAV Trigger: AACAGCTGCTGCTGGACGCCAGCGCCACCTCCCCTG...TCTCTGTCTTTGTAAAGTCCACATGATCTCTCTGTCATCAGAGAAACCTAGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | ATCACAGTTTCTTCCCTTACTCATGAGGAATGGGGAGAACCCCACAGTCTTCTTGGAAATGGTGGGCCATaGCCATGTCCTCCAGGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: ITVSSLTHEEWGEPHSLLGNGGP*PCPPGD Trigger: ATCGCCTGGAGGACATGGCCATGGCCCACCATTTCC...AAGAAGACTGTGGGGTTCTCCCCATTCCTCATGAGTAAGGGAAGAAACTGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
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| CDS-3UTR CCA 90 bp | AAAAGCTACCAACTAGGTTTCTCTGATGACAGAGAGATCATGTGGACTTTACAACGGCTTCGCTGGGGCTaGCAGTGGCGTCAGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KSYQLGFSDDREIMWTLQRLRWG*QWRQAV Trigger: GACAGCCTGACGCCACTGCCAGCCCCAGCGAAGCCG...TTGTAAAGTCCACATGATCTCTCTGTCATCAGAGAAACCTAGTTGGTAGCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
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| CDS-3UTR GCA 90 bp | AAAAGCTACCAACTAGGTTTCTCTGATGACAGAGAGATCATGTGGACTTTACAAGGTGTGGACCGGGGCTaGGTCTTCACTTCAGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: KSYQLGFSDDREIMWTLQGVDRG*VFTSAG Trigger: CCCGGCTGAAGTGAAGACGCAGCCCCGGTCCACACC...TTGTAAAGTCCACATGATCTCTCTGTCATCAGAGAAACCTAGTTGGTAGCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR GCA 90 bp | TCTGATGACAGAGAGATCATGTGGACTTTACAAAGACAGAGACGCCGGAGAGTCCAGGTGAGATGTCACTaGCAAACTGCTGTAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SDDREIMWTLQRQRRRRVQVRCH*QTAVGW Trigger: CCACCCTACAGCAGTTTGGCAGTGACATCTCACCTG...GACTCTCCGGCGTCTCTGTCTTTGTAAAGTCCACATGATCTCTCTGTCATCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR GCA 90 bp | GGCTCTGCCCAGCAAGGATGCTGCCTACTAGTCAAAAAGGAACAAAAGGTTTCTTGGGTGAGTGGCTGCTaGCGTTCATCAAGAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: GSAQQGCCLLVKKEQKVSWVSGC*RSSRDR Trigger: TCTGTCTCTTGATGAACGGCAGCAGCCACTCACCCA...AGAAACCTTTTGTTCCTTTTTGACTAGTAGGCAGCATCCTTGCTGGGCAGAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| CDS-3UTR CCA 90 bp | AAAAGCTACCAACTAGGTTTCTCTGATGACAGAGAGATCATGTGGACTTTACAAAGTCGACAGGGGAGGTaGCGCTGGCGTCCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KSYQLGFSDDREIMWTLQSRQGR*RWRPAA Trigger: TGCTGCTGGACGCCAGCGCCACCTCCCCTGTCGACT...TTGTAAAGTCCACATGATCTCTCTGTCATCAGAGAAACCTAGTTGGTAGCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
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| 3UTR CAA 72 bp | TACCTGCCCTCCCTACTCAGCCTTCCTGGTTTAGCTTaGGCCACAGAACAGGAAGTAAAGTGGTATTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YLPSLLSLPGLA*ATEQEVKWYSE Trigger: CTCAGAATACCACTTTACTTCCTGTTCTGTGGCCAAAGCTAAACCAGGAAGGCTGAGTAGGGAGGGCAGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| CDS-3UTR TCA 90 bp | AAAAGCTACCAACTAGGTTTCTCTGATGACAGAGAGATCATGTGGACTTTACAATGCAGGACCGCTTACTaGGGTGGTCGGGGTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KSYQLGFSDDREIMWTLQCRTAY*GGRGAE Trigger: CTCTGCACCCCGACCACCTCAGTAAGCGGTCCTGCA...TTGTAAAGTCCACATGATCTCTCTGTCATCAGAGAAACCTAGTTGGTAGCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
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| CDS-3UTR TCA 90 bp | AAGACTGACATGCAAACCAACCCAGGGCGGAGAGACCATGAAGAAAATACTTTGCCCACTCGCGTTCTGTaGGCCTGTGATCAATCACTT | + |
|
Preference number: 4 (lower is better) Translates to: KTDMQTNPGRRDHEENTLPTRVL*ACDQSL Trigger: AAGTGATTGATCACAGGCTCACAGAACGCGAGTGGG...CAAAGTATTTTCTTCATGGTCTCTCCGCCCTGGGTTGGTTTGCATGTCAGTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
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| CDS-3UTR GCA 90 bp | AAGACTGACATGCAAACCAACCCAGGGCGGAGAGACCATGAAGAAAATACTTTGCAGGTGAGATGTCACTaGCAAACTGCTGTAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KTDMQTNPGRRDHEENTLQVRCH*QTAVGW Trigger: CCACCCTACAGCAGTTTGGCAGTGACATCTCACCTG...CAAAGTATTTTCTTCATGGTCTCTCCGCCCTGGGTTGGTTTGCATGTCAGTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
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| CDS-3UTR CCA 90 bp | GGTTTCTCTGATGACAGAGAGATCATGTGGACTTTACAAAGACAGAGACGCCGGAACAAACGGCCTCAGTaGAAAGTTGGTGGCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GFSDDREIMWTLQRQRRRNKRPQ*KVGGFL Trigger: CAGGAAGCCACCAACTTTCCACTGAGGCCGTTTGTT...CCGGCGTCTCTGTCTTTGTAAAGTCCACATGATCTCTCTGTCATCAGAGAAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CCA 90 bp | CAACTAGGTTTCTCTGATGACAGAGAGATCATGTGGACTTTACAAAGACAGAGATGCTGGGCCAGGTACTaGGCAGGTGTCTGTTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QLGFSDDREIMWTLQRQRCWARY*AGVCLA Trigger: GGCCAAACAGACACCTGCCCAGTACCTGGCCCAGCA...TCTCTGTCTTTGTAAAGTCCACATGATCTCTCTGTCATCAGAGAAACCTAGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
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| CDS-3UTR CCA 90 bp | AAAAGCTACCAACTAGGTTTCTCTGATGACAGAGAGATCATGTGGACTTTACAAGACCGCTTACTGAGGTaGTCGGGGTGCAGAGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KSYQLGFSDDREIMWTLQDRLLR*SGCRGS Trigger: GGACCCTCTGCACCCCGACCACCTCAGTAAGCGGTC...TTGTAAAGTCCACATGATCTCTCTGTCATCAGAGAAACCTAGTTGGTAGCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
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| 3UTR CAA 72 bp | AACCCTAAATATGTAACCTGGCTCATGGAGATGAATTaGGCTGGGCAGCATTTTGTTGTCTGTGGTGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NPKYVTWLMEMN*AGQHFVVCGGP Trigger: GGGCCCACCACAGACAACAAAATGCTGCCCAGCCAAATTCATCTCCATGAGCCAGGTTACATATTTAGGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR CAA 72 bp | CTAGCAGACATGGCATCTCACCCTCGATGTCTACAATaGCTAGTCAAATCCCATGCACAGGAGACTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LADMASHPRCLQ*LVKSHAQETHC Trigger: ACAGTGAGTCTCCTGTGCATGGGATTTGACTAGCAATTGTAGACATCGAGGGTGAGATGCCATGTCTGCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| CDS-3UTR GCA 90 bp | AAAAGCTACCAACTAGGTTTCTCTGATGACAGAGAGATCATGTGGACTTTACAACCGTGGGTGAGTGGCTaGTGCCGTTCATCAGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KSYQLGFSDDREIMWTLQPWVSG*CRSSVC Trigger: ACACACTGATGAACGGCAGCAGCCACTCACCCACGG...TTGTAAAGTCCACATGATCTCTCTGTCATCAGAGAAACCTAGTTGGTAGCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006525.14 |
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| CDS-3UTR GCA 90 bp | AAAAGCTACCAACTAGGTTTCTCTGATGACAGAGAGATCATGTGGACTTTACAACCGTGGGTGAGTGGCTaGTGCCGTTCATCAAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: KSYQLGFSDDREIMWTLQPWVSG*CRSSRD Trigger: GTCTCTTGATGAACGGCAGCAGCCACTCACCCACGG...TTGTAAAGTCCACATGATCTCTCTGTCATCAGAGAAACCTAGTTGGTAGCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064674.13 ENSMUST00000127984.9 |
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| CDS-3UTR CCA 90 bp | AACGTTCTGTTAAACAATGGTCATACAGCTGTGAAGAAACACCAGCCACCAAAGTCAAGAGACAGACCATaGACCACTTTAAGCAGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: NVLLNNGHTAVKKHQPPKSRDRP*TTLSSR Trigger: ACGGCTGCTTAAAGTGGTCCATGGTCTGTCTCTTGA...CTTTGGTGGCTGGTGTTTCTTCACAGCTGTATGACCATTGTTTAACAGAACGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
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| 3UTR CAA 72 bp | AAGGAGGTATTTGAACTAAAGCAAACTGGTGACCCTTaGGGACCTACCTCAGAATATCTGGACCACATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KEVFELKQTGDP*GPTSEYLDHIG Trigger: TCCTATGTGGTCCAGATATTCTGAGGTAGGTCCCAAAGGGTCACCAGTTTGCTTTAGTTCAAATACCTCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| CDS-3UTR GCA 90 bp | AAAAGCTACCAACTAGGTTTCTCTGATGACAGAGAGATCATGTGGACTTTACAAAGAAGACTGTTGAGGTaGTTCCATTCTTCTGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KSYQLGFSDDREIMWTLQRRLLR*FHSSAH Trigger: GTGGGCAGAAGAATGGAAGCACCTCAACAGTCTTCT...TTGTAAAGTCCACATGATCTCTCTGTCATCAGAGAAACCTAGTTGGTAGCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS CCA 90 bp | AGGGACGAGAGGGCCCTGCCGAGCCGGCTTCGCTGGGGCTGGCAGTaGCGTCAGGCTGTCCAGGTAGTGGGTCAGCCACTGCAGCCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RDERALPSRLRWGWQ*RQAVQVVGQPLQPR Trigger: CCGCGGCTGCAGTGGCTGACCCACTACCTGGACAGCCTGACGCCACTGCCAGCCCCAGCGAAGCCGGCTCGGCAGGGCCCTCTCGTCCCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
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| CDS CCA 90 bp | GCCCCGGAGAGCAGGGACGAGAGGGCCCTGCCGAGCCGGCTTCGCTaGGGCTGGCAGTGGCGTCAGGCTGTCCAGGTAGTGGGTCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: APESRDERALPSRLR*GWQWRQAVQVVGQP Trigger: TGGCTGACCCACTACCTGGACAGCCTGACGCCACTGCCAGCCCCAGCGAAGCCGGCTCGGCAGGGCCCTCTCGTCCCTGCTCTCCGGGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS CCA 90 bp | GAGAGCAGGGACGAGAGGGCCCTGCCGAGCCGGCTTCGCTGGGGCTaGCAGTGGCGTCAGGCTGTCCAGGTAGTGGGTCAGCCACTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ESRDERALPSRLRWG*QWRQAVQVVGQPLQ Trigger: CTGCAGTGGCTGACCCACTACCTGGACAGCCTGACGCCACTGCCAGCCCCAGCGAAGCCGGCTCGGCAGGGCCCTCTCGTCCCTGCTCTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CAA 90 bp | CAGAGAGACGGACACAGAGGGGACAGACAGCGGCGGAGCTGGCCACACTCCTGCTCCGAGGCCTGTCGCTaGGCCTCCGCCAGGGCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: QRDGHRGDRQRRSWPHSCSEACR*ASARAR Trigger: ACGAGCCCTGGCGGAGGCCAAGCGACAGGCCTCGGA...GCAGGAGTGTGGCCAGCTCCGCCGCTGTCTGTCCCCTCTGTGTCCGTCTCTCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CAA 90 bp | CTGAGGGTCACGTGGCCTTGCTGCCGATGGCTCTGCCCAGCAAGGATGCTGCCTGGGCCACTGCAGCTGTaGAGGGACCGGGCAGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: LRVTWPCCRWLCPARMLPGPLQL*RDRAEM Trigger: CATCTCTGCCCGGTCCCTCAACAGCTGCAGTGGCCC...AGGCAGCATCCTTGCTGGGCAGAGCCATCGGCAGCAAGGCCACGTGACCCTCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
||
| CDS-3UTR CAA 90 bp | GTGCTCGCTGATGCCCCTGGGGCTGGCTGGGCGATACAGCAACTCTGGATAGAATCCGAGGCCTGTCGCTaGGCCTCCGCCAGGGCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: VLADAPGAGWAIQQLWIESEACR*ASARAR Trigger: ACGAGCCCTGGCGGAGGCCAAGCGACAGGCCTCGGA...TTCTATCCAGAGTTGCTGTATCGCCCAGCCAGCCCCAGGGGCATCAGCGAGCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS TCA 90 bp | TGGCCGTGGGTGAGTGGCTGCTGCCGTTCATCAGTGTGTGAGGTGTaGAGGAGGGTGGTCGTGTGGCTCCCTGGGATGAGGTGGGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: WPWVSGCCRSSVCEV*RRVVVWLPGMRWEV Trigger: CACCTCCCACCTCATCCCAGGGAGCCACACGACCACCCTCCTTCACACCTCACACACTGATGAACGGCAGCAGCCACTCACCCACGGCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006525.14 |
||
| CDS GCA 90 bp | TGGGCGGGGCTCAGGGTGCAGGACCGCTTACTGAGGTGGTCGGGGTaGAGAGGGTCCCGGTCTGATCCATTCTCTTTGGTCCTGTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: WAGLRVQDRLLRWSG*RGSRSDPFSLVLSG Trigger: ACCTGACAGGACCAAAGAGAATGGATCAGACCGGGACCCTCTGCACCCCGACCACCTCAGTAAGCGGTCCTGCACCCTGAGCCCCGCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CAA 90 bp | CAGCGGCGGAGCTGGCCACACTCCTGCTGGTGCCACTGTCTGACGCTCTGCGATGGCCTCAGTGGAAAGTaGGTGGCTTCCTGGAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QRRSWPHSCWCHCLTLCDGLSGK*VASWSL Trigger: CAAGCTCCAGGAAGCCACCAACTTTCCACTGAGGCC...ATCGCAGAGCGTCAGACAGTGGCACCAGCAGGAGTGTGGCCAGCTCCGCCGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CAA 90 bp | ACAAAGACAGAGACGCCGGAGAGTCAGGGAAACGGCAGGAGACAAAGACACGGATCCGAGGCCTGTCGCTaGGCCTCCGCCAGGGCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: TKTETPESQGNGRRQRHGSEACR*ASARAR Trigger: ACGAGCCCTGGCGGAGGCCAAGCGACAGGCCTCGGA...TCCGTGTCTTTGTCTCCTGCCGTTTCCCTGACTCTCCGGCGTCTCTGTCTTTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS TCA 90 bp | GCTGAAGCCATTGGGTGTAGATGGGGCACCGTGGATGGCCGTGGGTaGGTGGCTGCTGCCGTTCATCAGTGTGTGAGGTGTGAAGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: AEAIGCRWGTVDGRG*VAAAVHQCVRCEGG Trigger: CCCTCCTTCACACCTCACACACTGATGAACGGCAGCAGCCACTCACCCACGGCCATCCACGGTGCCCCATCTACACCCAATGGCTTCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006525.14 |
||
| CDS-3UTR CAA 90 bp | GTGCTCGCTGATGCCCCTGGGGCTGGCTGGGCGATACAGCAACTCTGGATAGAAAGGAAACGCTTAAGCTaGCTGAGCTGCCGTGCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: VLADAPGAGWAIQQLWIERKRLS*LSCRAP Trigger: CGGGGCACGGCAGCTCAGCAAGCTTAAGCGTTTCCT...TTCTATCCAGAGTTGCTGTATCGCCCAGCCAGCCCCAGGGGCATCAGCGAGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS TCA 90 bp | GGTGGCTTCCTGGAGCTTGGCATGAAACTCTTCGATCGTCAGAGTTaGGTTCACCAGGCCCAGCACCAGTGTGCGCACGCGCTCCCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: GGFLELGMKLFDRQS*VHQAQHQCAHALPD Trigger: ATCGGGGAGCGCGTGCGCACACTGGTGCTGGGCCTGGTGAACTCAACTCTGACGATCGAAGAGTTTCATGCCAAGCTCCAGGAAGCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 ENSMUST00000134045.2 |
||
| CDS TCA 90 bp | TCCTCCAGATCTCTTCAGGCATGTAGCCAGACAGGGTCCTGGGCGTaGAGTCCCGGTGAACATCTAGCTGAGACCCCTCAGGGCCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSRSLQACSQTGSWA*SPGEHLAETPQGHC Trigger: GCAGTGGCCCTGAGGGGTCTCAGCTAGATGTTCACCGGGACTTCACGCCCAGGACCCTGTCTGGCTACATGCCTGAAGAGATCTGGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS TCA 90 bp | GCTGAAGCCATTGGGTGTAGATGGGGCACCGTGGATGGCCGTGGGTaGGTGGCTGCTGCCGTTCATCAAGAGACAGACCATGGACCACTT | + |
|
Preference number: 5 (lower is better) Translates to: AEAIGCRWGTVDGRG*VAAAVHQETDHGPL Trigger: AAGTGGTCCATGGTCTGTCTCTTGATGAACGGCAGCAGCCACTCACCCACGGCCATCCACGGTGCCCCATCTACACCCAATGGCTTCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064674.13 ENSMUST00000127984.9 ENSMUST00000134045.2 |
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| CDS TCA 90 bp | GCAGGACCGCTTACTGAGGTGGTCGGGGTGCAGAGGGTCCCGGTCTaGTCCATTCTCTTTGGTCCTGTCAGGTGTTCTCCTTTTGCCGTT | + |
|
Preference number: 5 (lower is better) Translates to: AGPLTEVVGVQRVPV*SILFGPVRCSPFAV Trigger: AACGGCAAAAGGAGAACACCTGACAGGACCAAAGAGAATGGATCAGACCGGGACCCTCTGCACCCCGACCACCTCAGTAAGCGGTCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
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| CDS CCA 90 bp | CTGCCGTTCATCAAGAGACAGACCATGGACCACTTTAAGCAGCCGTaGAAACGGCCATGGGGAAGAGACGTCGCAGGTCCATCCTCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LPFIKRQTMDHFKQP*KRPWGRDVAGPSSP Trigger: TGGCGAGGATGGACCTGCGACGTCTCTTCCCCATGGCCGTTTCCACGGCTGCTTAAAGTGGTCCATGGTCTGTCTCTTGATGAACGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064674.13 ENSMUST00000127984.9 ENSMUST00000134045.2 |
||
| CDS-3UTR CAA 90 bp | ACAAAAGGTTTCTTCTTGGCCCCACCCACCAAATCCCAGCATCCCAACACCCCCAGGAAACGCTTAAGCTaGCTGAGCTGCCGTGCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: TKGFFLAPPTKSQHPNTPRKRLS*LSCRAP Trigger: CGGGGCACGGCAGCTCAGCAAGCTTAAGCGTTTCCT...GGGGGTGTTGGGATGCTGGGATTTGGTGGGTGGGGCCAAGAAGAAACCTTTTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
||
| CDS-3UTR CAA 90 bp | CTGCTGGTGCCACTGTCTGACGCTCTGCGATGCTTTCTGAGGGTGCTTGCGATGCTTCGATCGTCAGAGTaGAGTTCACCAGGCCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LLVPLSDALRCFLRVLAMLRSSE*SSPGPA Trigger: TGCTGGGCCTGGTGAACTCAACTCTGACGATCGAAG...CATCGCAAGCACCCTCAGAAAGCATCGCAGAGCGTCAGACAGTGGCACCAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CAA 90 bp | CTGCCCTTCTGGAAGGGCCAAGGTTGCTGCATGCAGTGGAGTAGCAGAGACAAGGGCCTCAGTGGAAAGTaGGTGGCTTCCTGGAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LPFWKGQGCCMQWSSRDKGLSGK*VASWSL Trigger: CAAGCTCCAGGAAGCCACCAACTTTCCACTGAGGCC...CTTGTCTCTGCTACTCCACTGCATGCAGCAACCTTGGCCCTTCCAGAAGGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| CDS-3UTR CAA 90 bp | GACTTTACAAAGACAGAGACGCCGGAGAGTCAGGGAAACGGCAGGAGACAAAGAGGGCCACTGCAGCTGTaGAGGGACCGGGCAGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: DFTKTETPESQGNGRRQRGPLQL*RDRAEM Trigger: CATCTCTGCCCGGTCCCTCAACAGCTGCAGTGGCCC...TCTTTGTCTCCTGCCGTTTCCCTGACTCTCCGGCGTCTCTGTCTTTGTAAAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS CCA 90 bp | AAGCCATTGGGTGTAGATGGGGCACCGTGGATGGCCGTGGGTGAGTaGCTGCTGCCGTTCATCAAGAGACAGACCATGGACCACTTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: KPLGVDGAPWMAVGE*LLPFIKRQTMDHFK Trigger: CTTAAAGTGGTCCATGGTCTGTCTCTTGATGAACGGCAGCAGCCACTCACCCACGGCCATCCACGGTGCCCCATCTACACCCAATGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064674.13 ENSMUST00000127984.9 ENSMUST00000134045.2 |
||
| CDS-3UTR CAA 90 bp | CAGGGACGTAGGTCATCAGGAATGCCACCTCAGGACTCCTGGCCCGGACTTCTAATGAGTTCATGGGCTTaGCGCTCCGCATCAGACACA | + |
|
Preference number: 5 (lower is better) Translates to: QGRRSSGMPPQDSWPGLLMSSWA*RSASDT Trigger: TGTGTCTGATGCGGAGCGCAAAGCCCATGAACTCAT...TAGAAGTCCGGGCCAGGAGTCCTGAGGTGGCATTCCTGATGACCTACGTCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| CDS-3UTR CAA 90 bp | TTTTATTTGGCAAACATCTCCTCGGTACTGATGCCACGGTTTGGGACCTCTGTGCCGGGGAGTCTGGCATaGCTGCAGCCTTCTCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: FYLANISSVLMPRFGTSVPGSLA*LQPSPS Trigger: GGAAGGAGAAGGCTGCAGCAATGCCAGACTCCCCGG...CACAGAGGTCCCAAACCGTGGCATCAGTACCGAGGAGATGTTTGCCAAATAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127984.9 |
||
| CDS-3UTR CAA 90 bp | TCTGATGACAGAGAGATCATGTGGACTTTACAAAGACAGAGACGCCGGAGAGTCAGGAAACGCTTAAGCTaGCTGAGCTGCCGTGCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: SDDREIMWTLQRQRRRRVRKRLS*LSCRAP Trigger: CGGGGCACGGCAGCTCAGCAAGCTTAAGCGTTTCCT...GACTCTCCGGCGTCTCTGTCTTTGTAAAGTCCACATGATCTCTCTGTCATCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
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| CDS-3UTR CAA 90 bp | GCTGCCGATGGCTCTGCCCAGCAAGGATGCTGCCTACTAGTCAAAAAGGAACAACTTTTGCCGTTCTCGTaGACTTCCAGCAGGAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: AADGSAQQGCCLLVKKEQLLPFS*TSSRSS Trigger: TGAGCTCCTGCTGGAAGTCAACGAGAACGGCAAAAG...TTGTTCCTTTTTGACTAGTAGGCAGCATCCTTGCTGGGCAGAGCCATCGGCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
||
| CDS-3UTR CAA 90 bp | ACAAAGACAGAGACGCCGGAGAGTCAGGGAAACGGCAGGAGACAAAGACACGGATCAGGTGTTCTCCTTTaGCCGTTCTCGTTGACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TKTETPESQGNGRRQRHGSGVLL*PFSLTS Trigger: GGAAGTCAACGAGAACGGCAAAAGGAGAACACCTGA...TCCGTGTCTTTGTCTCCTGCCGTTTCCCTGACTCTCCGGCGTCTCTGTCTTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CAA 90 bp | GGCTCTGCCCAGCAAGGATGCTGCCTACTAGTCAAAAAGGAACAAAAGGTTTCTGGCCTCAGTGGAAAGTaGGTGGCTTCCTGGAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GSAQQGCCLLVKKEQKVSGLSGK*VASWSL Trigger: CAAGCTCCAGGAAGCCACCAACTTTCCACTGAGGCC...AGAAACCTTTTGTTCCTTTTTGACTAGTAGGCAGCATCCTTGCTGGGCAGAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
||
| CDS-3UTR CAA 90 bp | TCTGATGACAGAGAGATCATGTGGACTTTACAAAGACAGAGACGCCGGAGAGTCCTTCGATCGTCAGAGTaGAGTTCACCAGGCCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SDDREIMWTLQRQRRRRVLRSSE*SSPGPA Trigger: TGCTGGGCCTGGTGAACTCAACTCTGACGATCGAAG...GACTCTCCGGCGTCTCTGTCTTTGTAAAGTCCACATGATCTCTCTGTCATCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CAA 90 bp | CAACTAGGTTTCTCTGATGACAGAGAGATCATGTGGACTTTACAAAGACAGAGAGGGCCACTGCAGCTGTaGAGGGACCGGGCAGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: QLGFSDDREIMWTLQRQRGPLQL*RDRAEM Trigger: CATCTCTGCCCGGTCCCTCAACAGCTGCAGTGGCCC...TCTCTGTCTTTGTAAAGTCCACATGATCTCTCTGTCATCAGAGAAACCTAGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CAA 90 bp | TTACAAAGACAGAGACGCCGGAGAGTCAGGGAAACGGCAGGAGACAAAGACACGCAGTTCAGAAGACTGTaGAGGTGCTTCCATTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LQRQRRRRVRETAGDKDTQFRRL*RCFHSS Trigger: AGAAGAATGGAAGCACCTCAACAGTCTTCTGAACTG...CGTGTCTTTGTCTCCTGCCGTTTCCCTGACTCTCCGGCGTCTCTGTCTTTGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CAA 90 bp | TCTGATGACAGAGAGATCATGTGGACTTTACAAAGACAGAGACGCCGGAGAGTCATGAGTTCATGGGCTTaGCGCTCCGCATCAGACACA | + |
|
Preference number: 5 (lower is better) Translates to: SDDREIMWTLQRQRRRRVMSSWA*RSASDT Trigger: TGTGTCTGATGCGGAGCGCAAAGCCCATGAACTCAT...GACTCTCCGGCGTCTCTGTCTTTGTAAAGTCCACATGATCTCTCTGTCATCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CAA 90 bp | ATCACAGTTTCTTCCCTTACTCATGAGGAATGGGGAGAACCCCACAGTCTTCTTCTTTTGCCGTTCTCGTaGACTTCCAGCAGGAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ITVSSLTHEEWGEPHSLLLLPFS*TSSRSS Trigger: TGAGCTCCTGCTGGAAGTCAACGAGAACGGCAAAAG...AAGAAGACTGTGGGGTTCTCCCCATTCCTCATGAGTAAGGGAAGAAACTGTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CAA 90 bp | GGTTTCTCTGATGACAGAGAGATCATGTGGACTTTACAAAGACAGAGACGCCGGTCAGGTGTTCTCCTTTaGCCGTTCTCGTTGACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GFSDDREIMWTLQRQRRRSGVLL*PFSLTS Trigger: GGAAGTCAACGAGAACGGCAAAAGGAGAACACCTGA...CCGGCGTCTCTGTCTTTGTAAAGTCCACATGATCTCTCTGTCATCAGAGAAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
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| CDS-3UTR CAA 90 bp | TCTGATGACAGAGAGATCATGTGGACTTTACAAAGACAGAGACGCCGGAGAGTCTCAGGTGTTCTCCTTTaGCCGTTCTCGTTGACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SDDREIMWTLQRQRRRRVSGVLL*PFSLTS Trigger: GGAAGTCAACGAGAACGGCAAAAGGAGAACACCTGA...GACTCTCCGGCGTCTCTGTCTTTGTAAAGTCCACATGATCTCTCTGTCATCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS-3UTR CAA 90 bp | TGGACTTTACAAAGACAGAGACGCCGGAGAGTCAGGGAAACGGCAGGAGACAAACAGTTCAGAAGACTGTaGAGGTGCTTCCATTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: WTLQRQRRRRVRETAGDKQFRRL*RCFHSS Trigger: AGAAGAATGGAAGCACCTCAACAGTCTTCTGAACTG...TTTGTCTCCTGCCGTTTCCCTGACTCTCCGGCGTCTCTGTCTTTGTAAAGTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
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| CDS CCA 90 bp | CAGTGGAAGATTAGCCTTCAGAAAAGGGATAACAAACGGCCTCAGTaGAAAGTTGGTGGCTTCCTGGAGCTTGGCATGAAACTCTTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: QWKISLQKRDNKRPQ*KVGGFLELGMKLFD Trigger: ATCGAAGAGTTTCATGCCAAGCTCCAGGAAGCCACCAACTTTCCACTGAGGCCGTTTGTTATCCCTTTTCTGAAGGCTAATCTTCCACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 ENSMUST00000134045.2 |
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| CDS-3UTR CAA 90 bp | AAGACTGACATGCAAACCAACCCAGGGCGGAGAGACCATGAAGAAAATACTTTGCAGTTCAGAAGACTGTaGAGGTGCTTCCATTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: KTDMQTNPGRRDHEENTLQFRRL*RCFHSS Trigger: AGAAGAATGGAAGCACCTCAACAGTCTTCTGAACTG...CAAAGTATTTTCTTCATGGTCTCTCCGCCCTGGGTTGGTTTGCATGTCAGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006525.14 ENSMUST00000127984.9 |
||
| CDS-3UTR CAA 90 bp | AAAAGCTACCAACTAGGTTTCTCTGATGACAGAGAGATCATGTGGACTTTACAACTTTTGCCGTTCTCGTaGACTTCCAGCAGGAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KSYQLGFSDDREIMWTLQLLPFS*TSSRSS Trigger: TGAGCTCCTGCTGGAAGTCAACGAGAACGGCAAAAG...TTGTAAAGTCCACATGATCTCTCTGTCATCAGAGAAACCTAGTTGGTAGCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
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| CDS-3UTR CAA 90 bp | AAAAGCTACCAACTAGGTTTCTCTGATGACAGAGAGATCATGTGGACTTTACAAATGAGTTCATGGGCTTaGCGCTCCGCATCAGACACA | + |
|
Preference number: 5 (lower is better) Translates to: KSYQLGFSDDREIMWTLQMSSWA*RSASDT Trigger: TGTGTCTGATGCGGAGCGCAAAGCCCATGAACTCAT...TTGTAAAGTCCACATGATCTCTCTGTCATCAGAGAAACCTAGTTGGTAGCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS GCA 72 bp | GCCTGGCGGCCCCGGAGAGCAGGGACGAGAGGGCCCTaGCGAGCCGGCTTCGCTGGGGCTGGCAGTGGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: AWRPRRAGTRGP*RAGFAGAGSGV Trigger: GACGCCACTGCCAGCCCCAGCGAAGCCGGCTCGGCAGGGCCCTCTCGTCCCTGCTCTCCGGGGCCGCCAGGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS CCA 72 bp | GACGAGAGGGCCCTGCCGAGCCGGCTTCGCTGGGGCTaGCAGTGGCGTCAGGCTGTCCAGGTAGTGGGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: DERALPSRLRWG*QWRQAVQVVGQ Trigger: CTGACCCACTACCTGGACAGCCTGACGCCACTGCCAGCCCCAGCGAAGCCGGCTCGGCAGGGCCCTCTCGTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS TCA 72 bp | CGGATCCAGTGGTTGAGTTCCTCACGGTCGGCCTCCTaGCACCGGCGCAGGACGGTGAGGGATCGCCGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: RIQWLSSSRSAS*HRRRTVRDRRV Trigger: GACCCGGCGATCCCTCACCGTCCTGCGCCGGTGTCAGGAGGCCGACCGTGAGGAACTCAACCACTGGATCCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS TCA 72 bp | CGGGGGCAGGTGCTGTGTGGAGAGCGAGGCCGTGGATaGGGTGGCTGGGCCGTTGCTGAAGCCATTGGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: RGQVLCGERGRG*GGWAVAEAIGC Trigger: ACACCCAATGGCTTCAGCAACGGCCCAGCCACCTCATCCACGGCCTCGCTCTCCACACAGCACCTGCCCCCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 ENSMUST00000134045.2 |
||
| CDS CCA 72 bp | TGGGCGGGGCTCAGGGTGCAGGACCGCTTACTGAGGTaGTCGGGGTGCAGAGGGTCCCGGTCTGATCCATTC | + |
|
Preference number: 6 (lower is better) Translates to: WAGLRVQDRLLR*SGCRGSRSDPF Trigger: GAATGGATCAGACCGGGACCCTCTGCACCCCGACCACCTCAGTAAGCGGTCCTGCACCCTGAGCCCCGCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS CCA 72 bp | CAGGATGGCGGTAGGAGTCCCGGAAATGGTGGGCCATaGCCATGTCCTCCAGGCGATAGTGCGGGGGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: QDGGRSPGNGGP*PCPPGDSAGVG Trigger: CCCCACCCCCGCACTATCGCCTGGAGGACATGGCCATGGCCCACCATTTCCGGGACTCCTACCGCCATCCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS CAA 90 bp | TCCTCCGAGGCCTGTCGCTTGGCCTCCGCCAGGGCTCGTTCCATCTaGGCACGCTCTGTGGTGATGAGTTCATGGGCTTTGCGCTCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSEACRLASARARSI*ARSVVMSSWALRSA Trigger: TGCGGAGCGCAAAGCCCATGAACTCATCACCACAGAGCGTGCCAAGATGGAACGAGCCCTGGCGGAGGCCAAGCGACAGGCCTCGGAGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS TCA 72 bp | ACGTCGCAGGTCCATCCTCGCCATGTGTGTGAGGTGTaGAGGAGGGTGGTCGTGTGGCTCCCTGGGATGAGG | + |
|
Preference number: 6 (lower is better) Translates to: TSQVHPRHVCEV*RRVVVWLPGMR Trigger: CCTCATCCCAGGGAGCCACACGACCACCCTCCTTCACACCTCACACACATGGCGAGGATGGACCTGCGACGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064674.13 ENSMUST00000127984.9 ENSMUST00000134045.2 |
||
| CDS GCA 72 bp | TCGTCAGAGTTGAGTTCACCAGGCCCAGCACCAGTGTaGGCACGCGCTCCCCGATCTCAGGTGAGATGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: SSELSSPGPAPV*ARAPRSQVRCH Trigger: GTGACATCTCACCTGAGATCGGGGAGCGCGTGCGCACACTGGTGCTGGGCCTGGTGAACTCAACTCTGACGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 ENSMUST00000134045.2 |
||
| CDS GCA 72 bp | CTCAGGGTGCAGGACCGCTTACTGAGGTGGTCGGGGTaGAGAGGGTCCCGGTCTGATCCATTCTCTTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LRVQDRLLRWSG*RGSRSDPFSLV Trigger: GACCAAAGAGAATGGATCAGACCGGGACCCTCTGCACCCCGACCACCTCAGTAAGCGGTCCTGCACCCTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS CCA 72 bp | GGTGTAGATGGGGCACCGTGGATGGCCGTGGGTGAGTaGCTGCTGCCGTTCATCAAGAGACAGACCATGGAC | + |
|
Preference number: 6 (lower is better) Translates to: GVDGAPWMAVGE*LLPFIKRQTMD Trigger: GTCCATGGTCTGTCTCTTGATGAACGGCAGCAGCCACTCACCCACGGCCATCCACGGTGCCCCATCTACACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064674.13 ENSMUST00000127984.9 ENSMUST00000134045.2 |
||
| CDS CAA 72 bp | GCCTGTCGCTTGGCCTCCGCCAGGGCTCGTTCCATCTaGGCACGCTCTGTGGTGATGAGTTCATGGGCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: ACRLASARARSI*ARSVVMSSWAL Trigger: CAAAGCCCATGAACTCATCACCACAGAGCGTGCCAAGATGGAACGAGCCCTGGCGGAGGCCAAGCGACAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
||
| CDS CAA 90 bp | TGGTGGCTTCCTGGAGCTTGGCATGAAACTCTTCGATCGTCAGAGTaGAGTTCACCAGGCCCAGCACCAGTGTGCGCACGCGCTCCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: WWLPGAWHETLRSSE*SSPGPAPVCARAPR Trigger: TCGGGGAGCGCGTGCGCACACTGGTGCTGGGCCTGGTGAACTCAACTCTGACGATCGAAGAGTTTCATGCCAAGCTCCAGGAAGCCACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 ENSMUST00000134045.2 |
||
| CDS TCA 72 bp | ATTGGGTGTAGATGGGGCACCGTGGATGGCCGTGGGTaGGTGGCTGCTGCCGTTCATCAGTGTGTGAGGTGT | + |
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Preference number: 6 (lower is better) Translates to: IGCRWGTVDGRG*VAAAVHQCVRC Trigger: ACACCTCACACACTGATGAACGGCAGCAGCCACTCACCCACGGCCATCCACGGTGCCCCATCTACACCCAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006525.14 |
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| CDS CCA 72 bp | TGTGATCAATCACTTCTTCTTGTCGAGACCCAGGTATaGCCAGGGGCCGGTGGCGTTCCCGTAGCTCTCGGG | + |
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Preference number: 6 (lower is better) Translates to: CDQSLLLVETQV*PGAGGVPVALG Trigger: CCCGAGAGCTACGGGAACGCCACCGGCCCCTGGCCATACCTGGGTCTCGACAAGAAGAAGTGATTGATCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
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| CDS TCA 72 bp | CTGGAGCTTGGCATGAAACTCTTCGATCGTCAGAGTTaGGTTCACCAGGCCCAGCACCAGTGTGCGCACGCG | + |
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Preference number: 6 (lower is better) Translates to: LELGMKLFDRQS*VHQAQHQCAHA Trigger: CGCGTGCGCACACTGGTGCTGGGCCTGGTGAACTCAACTCTGACGATCGAAGAGTTTCATGCCAAGCTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 ENSMUST00000134045.2 |
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| CDS TCA 72 bp | TCTCTTCAGGCATGTAGCCAGACAGGGTCCTGGGCGTaGAGTCCCGGTGAACATCTAGCTGAGACCCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: SLQACSQTGSWA*SPGEHLAETPQ Trigger: CTGAGGGGTCTCAGCTAGATGTTCACCGGGACTTCACGCCCAGGACCCTGTCTGGCTACATGCCTGAAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
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| CDS TCA 72 bp | ATTGGGTGTAGATGGGGCACCGTGGATGGCCGTGGGTaGGTGGCTGCTGCCGTTCATCAAGAGACAGACCAT | + |
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Preference number: 6 (lower is better) Translates to: IGCRWGTVDGRG*VAAAVHQETDH Trigger: ATGGTCTGTCTCTTGATGAACGGCAGCAGCCACTCACCCACGGCCATCCACGGTGCCCCATCTACACCCAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064674.13 ENSMUST00000127984.9 ENSMUST00000134045.2 |
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| CDS GCA 72 bp | ATGGGGCACCGTGGATGGCCGTGGGTGAGTGGCTGCTaGCGTTCATCAAGAGACAGACCATGGACCACTTTA | + |
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Preference number: 6 (lower is better) Translates to: MGHRGWPWVSGC*RSSRDRPWTTL Trigger: TAAAGTGGTCCATGGTCTGTCTCTTGATGAACGGCAGCAGCCACTCACCCACGGCCATCCACGGTGCCCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064674.13 ENSMUST00000127984.9 ENSMUST00000134045.2 |
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| CDS CAA 72 bp | CCTGGAGCTTGGCATGAAACTCTTCGATCGTCAGAGTaGAGTTCACCAGGCCCAGCACCAGTGTGCGCACGC | + |
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Preference number: 6 (lower is better) Translates to: PGAWHETLRSSE*SSPGPAPVCAR Trigger: GCGTGCGCACACTGGTGCTGGGCCTGGTGAACTCAACTCTGACGATCGAAGAGTTTCATGCCAAGCTCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 ENSMUST00000134045.2 |
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| CDS CAA 90 bp | CCATTCTCTTTGGTCCTGTCAGGTGTTCTCCTTTTGCCGTTCTCGTaGACTTCCAGCAGGAGCTCAGACGAGTCGACAGGGGAGGTGGCG | + |
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Preference number: 6 (lower is better) Translates to: PFSLVLSGVLLLPFS*TSSRSSDESTGEVA Trigger: CGCCACCTCCCCTGTCGACTCGTCTGAGCTCCTGCTGGAAGTCAACGAGAACGGCAAAAGGAGAACACCTGACAGGACCAAAGAGAATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
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| CDS TCA 72 bp | CTTACTGAGGTGGTCGGGGTGCAGAGGGTCCCGGTCTaGTCCATTCTCTTTGGTCCTGTCAGGTGTTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: LTEVVGVQRVPV*SILFGPVRCSP Trigger: AGGAGAACACCTGACAGGACCAAAGAGAATGGATCAGACCGGGACCCTCTGCACCCCGACCACCTCAGTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
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| CDS CCA 72 bp | GTGAGTGGCTGCTGCCGTTCATCAAGAGACAGACCATaGACCACTTTAAGCAGCCGTGGAAACGGCCATGGG | + |
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Preference number: 6 (lower is better) Translates to: VSGCCRSSRDRP*TTLSSRGNGHG Trigger: CCCATGGCCGTTTCCACGGCTGCTTAAAGTGGTCCATGGTCTGTCTCTTGATGAACGGCAGCAGCCACTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064674.13 ENSMUST00000127984.9 ENSMUST00000134045.2 |
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| CDS GCA 72 bp | CGCTCCCCGATCTCAGGTGAGATGTCACTGCCAAACTaGTGTAGGGTGGTGAGGAAACGCTTAAGCTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: RSPISGEMSLPN*CRVVRKRLSLL Trigger: CAGCAAGCTTAAGCGTTTCCTCACCACCCTACAGCAGTTTGGCAGTGACATCTCACCTGAGATCGGGGAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 ENSMUST00000134045.2 |
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| CDS CCA 72 bp | ATCAAGAGACAGACCATGGACCACTTTAAGCAGCCGTaGAAACGGCCATGGGGAAGAGACGTCGCAGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: IKRQTMDHFKQP*KRPWGRDVAGP Trigger: TGGACCTGCGACGTCTCTTCCCCATGGCCGTTTCCACGGCTGCTTAAAGTGGTCCATGGTCTGTCTCTTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064674.13 ENSMUST00000127984.9 ENSMUST00000134045.2 |
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| CDS CAA 72 bp | TTGGTCCTGTCAGGTGTTCTCCTTTTGCCGTTCTCGTaGACTTCCAGCAGGAGCTCAGACGAGTCGACAGGG | + |
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Preference number: 6 (lower is better) Translates to: LVLSGVLLLPFS*TSSRSSDESTG Trigger: CCCTGTCGACTCGTCTGAGCTCCTGCTGGAAGTCAACGAGAACGGCAAAAGGAGAACACCTGACAGGACCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
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| CDS CAA 72 bp | GATCCATTCTCTTTGGTCCTGTCAGGTGTTCTCCTTTaGCCGTTCTCGTTGACTTCCAGCAGGAGCTCAGAC | + |
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Preference number: 6 (lower is better) Translates to: DPFSLVLSGVLL*PFSLTSSRSSD Trigger: GTCTGAGCTCCTGCTGGAAGTCAACGAGAACGGCAAAAGGAGAACACCTGACAGGACCAAAGAGAATGGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 |
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| CDS CCA 72 bp | ATTAGCCTTCAGAAAAGGGATAACAAACGGCCTCAGTaGAAAGTTGGTGGCTTCCTGGAGCTTGGCATGAAA | + |
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Preference number: 6 (lower is better) Translates to: ISLQKRDNKRPQ*KVGGFLELGMK Trigger: TTTCATGCCAAGCTCCAGGAAGCCACCAACTTTCCACTGAGGCCGTTTGTTATCCCTTTTCTGAAGGCTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006525.14 ENSMUST00000064674.13 ENSMUST00000127984.9 ENSMUST00000134045.2 |
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