Pregenerated sensors for CARHSP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000008393Ensembl transcript IDs: ENSMUST00000008537.10
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCAATGGCTGGAGGCTGCACTGGTGGCTGAGAGCACCCCTTGCCTaGCCGCAACTCCTTCCCTCCAGGAAATGCTTGAGAGGGGCCACG | + |
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Preference number: 1 (lower is better) Translates to: CNGWRLHWWLRAPLA*PQLLPSRKCLRGAT Trigger: CGTGGCCCCTCTCAAGCATTTCCTGGAGGGAAGGAGTTGCGGGCAGGCAAGGGGTGCTCTCAGCCACCAGTGCAGCCTCCAGCCATTGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR GCA 90 bp | TTGTTGCAATGGCTGGAGGCTGCACTGGTGGCTGAGAGCACCCCTTaGCTGCCCGCAACTCCTTCCCTCCAGGAAATGCTTGAGAGGGGC | + |
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Preference number: 1 (lower is better) Translates to: LLQWLEAALVAESTP*LPATPSLQEMLERG Trigger: GCCCCTCTCAAGCATTTCCTGGAGGGAAGGAGTTGCGGGCAGGCAAGGGGTGCTCTCAGCCACCAGTGCAGCCTCCAGCCATTGCAACAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR CCA 90 bp | TTTCAGACAGTGAGAGCTTGTTGCAATGGCTGGAGGCTGCACTGGTaGCTGAGAGCACCCCTTGCCTGCCCGCAACTCCTTCCCTCCAGG | + |
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Preference number: 1 (lower is better) Translates to: FQTVRACCNGWRLHW*LRAPLACPQLLPSR Trigger: CCTGGAGGGAAGGAGTTGCGGGCAGGCAAGGGGTGCTCTCAGCCACCAGTGCAGCCTCCAGCCATTGCAACAAGCTCTCACTGTCTGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR CCA 90 bp | GCTTTTCAGACAGTGAGAGCTTGTTGCAATGGCTGGAGGCTGCACTaGTGGCTGAGAGCACCCCTTGCCTGCCCGCAACTCCTTCCCTCC | + |
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Preference number: 1 (lower is better) Translates to: AFQTVRACCNGWRLH*WLRAPLACPQLLPS Trigger: GGAGGGAAGGAGTTGCGGGCAGGCAAGGGGTGCTCTCAGCCACCAGTGCAGCCTCCAGCCATTGCAACAAGCTCTCACTGTCTGAAAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR GCA 90 bp | GGGAAAATAGCACGTTTGACCTACTCGGGTGCCTTGGGCTGGGACTaGACCCTCGCCACTCAGCCTCCGCAGGTGCCTCTCCTTTTCAAA | + |
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Preference number: 1 (lower is better) Translates to: GKIARLTYSGALGWD*TLATQPPQVPLLFK Trigger: TTTGAAAAGGAGAGGCACCTGCGGAGGCTGAGTGGCGAGGGTGCAGTCCCAGCCCAAGGCACCCGAGTAGGTCAAACGTGCTATTTTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR CCA 90 bp | GGTGGAGACAGACCTGCTGCAAAGGCACCAAGAGGCAAAGTCCCCTaGGAAGCTTCCCCGACCAGGGCATTGGGTCATGGGAAGTCTTCA | + |
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Preference number: 1 (lower is better) Translates to: GGDRPAAKAPRGKVP*EASPTRALGHGKSS Trigger: TGAAGACTTCCCATGACCCAATGCCCTGGTCGGGGAAGCTTCCCAGGGGACTTTGCCTCTTGGTGCCTTTGCAGCAGGTCTGTCTCCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR GCA 90 bp | CCTTTACAAAGGGTTCTGTGGGGCAGAAGAATTCAGAGGCCAGTCTaGCAGCTCAGTGGGGGACAGGGCTCACTAGCAGGTCAACCATGT | + |
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Preference number: 1 (lower is better) Translates to: PLQRVLWGRRIQRPV*QLSGGQGSLAGQPC Trigger: ACATGGTTGACCTGCTAGTGAGCCCTGTCCCCCACTGAGCTGGCAGACTGGCCTCTGAATTCTTCTGCCCCACAGAACCCTTTGTAAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR CCA 90 bp | GCTCTGTGCTGTTGGCATTTCCAGGGCTCTGGGCTCCCCAAGCACTaGGGAAGAAGGGAAAAGATCCTTAGGCATGTCTTAGAGAATATA | + |
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Preference number: 1 (lower is better) Translates to: ALCCWHFQGSGLPKH*GRREKILRHVLENI Trigger: TATATTCTCTAAGACATGCCTAAGGATCTTTTCCCTTCTTCCCCAGTGCTTGGGGAGCCCAGAGCCCTGGAAATGCCAACAGCACAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR TCA 90 bp | TGTGCTACAGCAGAGATCCTAAGCATTAGAGTCTTTCCCAGAAGGTaGAGGTGGAGACAGACCTGCTGCAAAGGCACCAAGAGGCAAAGT | + |
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Preference number: 1 (lower is better) Translates to: CATAEILSIRVFPRR*RWRQTCCKGTKRQS Trigger: ACTTTGCCTCTTGGTGCCTTTGCAGCAGGTCTGTCTCCACCTTCACCTTCTGGGAAAGACTCTAATGCTTAGGATCTCTGCTGTAGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR GCA 90 bp | TTTCTCCTTCAACACCTATCCTTACAAGGCCATCAGAAAGGAAGCTaGCTTTCTTCAGTGGGTCAGTGTCAACATCCTAGGGTTTATGCT | + |
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Preference number: 1 (lower is better) Translates to: FLLQHLSLQGHQKGS*LSSVGQCQHPRVYA Trigger: AGCATAAACCCTAGGATGTTGACACTGACCCACTGAAGAAAGGCAGCTTCCTTTCTGATGGCCTTGTAAGGATAGGTGTTGAAGGAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR-3UTR CCA 90 bp | CTGTGGGGCAGAAGAATTCAGAGGCCAGTCTGCCAGCTCAGTGGGGGACAGGGCGCATTTCCAGGGCTCTaGGCTCCCCAAGCACTGGGG | + |
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Preference number: 2 (lower is better) Translates to: LWGRRIQRPVCQLSGGQGAFPGL*APQALG Trigger: CCCCAGTGCTTGGGGAGCCCAGAGCCCTGGAAATGC...GCCCTGTCCCCCACTGAGCTGGCAGACTGGCCTCTGAATTCTTCTGCCCCACAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR CAA 90 bp | GAGGGGGCATTTGGGAAAATAGCACGTTTGACCTACTCGGGTGCCTaGGGCTGGGACTGCACCCTCGCCACTCAGCCTCCGCAGGTGCCT | + |
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Preference number: 2 (lower is better) Translates to: EGAFGKIARLTYSGA*GWDCTLATQPPQVP Trigger: AGGCACCTGCGGAGGCTGAGTGGCGAGGGTGCAGTCCCAGCCCAAGGCACCCGAGTAGGTCAAACGTGCTATTTTCCCAAATGCCCCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR-3UTR GCA 90 bp | CTGTGGGGCAGAAGAATTCAGAGGCCAGTCTGCCAGCTCAGTGGGGGACAGGGCCTTCCCTCCAGGAAATaGTTGAGAGGGGCCACGCCC | + |
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Preference number: 2 (lower is better) Translates to: LWGRRIQRPVCQLSGGQGLPSRK*LRGATP Trigger: GGGCGTGGCCCCTCTCAAGCATTTCCTGGAGGGAAG...GCCCTGTCCCCCACTGAGCTGGCAGACTGGCCTCTGAATTCTTCTGCCCCACAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR-3UTR CCA 90 bp | GAGGCCAGTCTGCCAGCTCAGTGGGGGACAGGGCTCACTAGCAGGTCAACCATGACCACCCTCCCCTCTTaGGCCTTCCTGCTGAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: EASLPAQWGTGLTSRSTMTTLPS*AFLLRS Trigger: AGACCTCAGCAGGAAGGCCCAAGAGGGGAGGGTGGT...CATGGTTGACCTGCTAGTGAGCCCTGTCCCCCACTGAGCTGGCAGACTGGCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR-3UTR TCA 90 bp | CTGTGGGGCAGAAGAATTCAGAGGCCAGTCTGCCAGCTCAGTGGGGGACAGGGCGTGAAGGCACACCTGTaGCCCCAGCAAATAGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: LWGRRIQRPVCQLSGGQGVKAHL*PQQIGS Trigger: GCTTCCTATTTGCTGGGGTCACAGGTGTGCCTTCAC...GCCCTGTCCCCCACTGAGCTGGCAGACTGGCCTCTGAATTCTTCTGCCCCACAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR-3UTR TCA 90 bp | AGTCTGCCAGCTCAGTGGGGGACAGGGCTCACTAGCAGGTCAACCATGTGCTGCGAAAGCATCAGGGAGTaGAGGCACACCTGTGACCCC | + |
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Preference number: 2 (lower is better) Translates to: SLPAQWGTGLTSRSTMCCESIRE*RHTCDP Trigger: GGGGTCACAGGTGTGCCTTCACTCCCTGATGCTTTC...GCAGCACATGGTTGACCTGCTAGTGAGCCCTGTCCCCCACTGAGCTGGCAGACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR-3UTR GCA 90 bp | CTGTGGGGCAGAAGAATTCAGAGGCCAGTCTGCCAGCTCAGTGGGGGACAGGGCCATTGTGGCTCAGCCTaGCCAGTTCTGGGACTACCT | + |
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Preference number: 2 (lower is better) Translates to: LWGRRIQRPVCQLSGGQGHCGSA*PVLGLP Trigger: AGGTAGTCCCAGAACTGGGCAGGCTGAGCCACAATG...GCCCTGTCCCCCACTGAGCTGGCAGACTGGCCTCTGAATTCTTCTGCCCCACAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR-3UTR TCA 90 bp | ACAGGGCTCACTAGCAGGTCAACCATGTGCTGCCCAAAGTCTAACCATACCAGAGGCTGCACTGGTGGCTaGGAGCACCCCTTGCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: TGLTSRSTMCCPKSNHTRGCTGG*EHPLPA Trigger: GGCAGGCAAGGGGTGCTCTCAGCCACCAGTGCAGCC...TCTGGTATGGTTAGACTTTGGGCAGCACATGGTTGACCTGCTAGTGAGCCCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR-3UTR TCA 90 bp | GCTGGCCTAGAATGCTGTTTCAACCTGCCAAGTGCAGAGATTACAGGCATGCACCTTGGGCCTTCCTGCTaGGGTCTCTTCCCCACCCCC | + |
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Preference number: 2 (lower is better) Translates to: AGLECCFNLPSAEITGMHLGPSC*GLFPTP Trigger: GGGGGTGGGGAAGAGACCTCAGCAGGAAGGCCCAAG...GTGCATGCCTGTAATCTCTGCACTTGGCAGGTTGAAACAGCATTCTAGGCCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR-3UTR CCA 90 bp | GGGAAGCTTCCCCGACCAGGGCATTGGGTCATGGGAAGTCTTCATAGGGCTGGTATGTTCTATCCAGGATaGCCCTGCTCCTCCTTCCCC | + |
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Preference number: 2 (lower is better) Translates to: GKLPRPGHWVMGSLHRAGMFYPG*PCSSFP Trigger: GGGGAAGGAGGAGCAGGGCCATCCTGGATAGAACAT...ACCAGCCCTATGAAGACTTCCCATGACCCAATGCCCTGGTCGGGGAAGCTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR-3UTR GCA 90 bp | GGGAAGCTTCCCCGACCAGGGCATTGGGTCATGGGAAGTCTTCATAGGGCTGGTCTCAGCCTCCGCAGGTaGCTCTCCTTTTCAAATGCT | + |
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Preference number: 2 (lower is better) Translates to: GKLPRPGHWVMGSLHRAGLSLRR*LSFSNA Trigger: AGCATTTGAAAAGGAGAGGCACCTGCGGAGGCTGAG...ACCAGCCCTATGAAGACTTCCCATGACCCAATGCCCTGGTCGGGGAAGCTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR-3UTR CCA 90 bp | ACAGGGCTCACTAGCAGGTCAACCATGTGCTGCCCAAAGTCTAACCATACCAGAGGCTGGAGGCTGCACTaGTGGCTGAGAGCACCCCTT | + |
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Preference number: 2 (lower is better) Translates to: TGLTSRSTMCCPKSNHTRGWRLH*WLRAPL Trigger: AAGGGGTGCTCTCAGCCACCAGTGCAGCCTCCAGCC...TCTGGTATGGTTAGACTTTGGGCAGCACATGGTTGACCTGCTAGTGAGCCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR-3UTR CCA 90 bp | CAAGGCATGAAAGGTGCTAAGAGCTTGGGGCCAGCCTGGGCTATACAGCAGGAGTCCCTAGAGGCCAAGTaGAAAAGCCCAGCCTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: QGMKGAKSLGPAWAIQQESLEAK*KSPAFS Trigger: GGAGAAGGCTGGGCTTTTCCACTTGGCCTCTAGGGA...CTCCTGCTGTATAGCCCAGGCTGGCCCCAAGCTCTTAGCACCTTTCATGCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR-3UTR CCA 90 bp | CAAGGCATGAAAGGTGCTAAGAGCTTGGGGCCAGCCTGGGCTATACAGCAGGAGGGGCTCCCCAAGCACTaGGGAAGAAGGGAAAAGATC | + |
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Preference number: 2 (lower is better) Translates to: QGMKGAKSLGPAWAIQQEGLPKH*GRREKI Trigger: GATCTTTTCCCTTCTTCCCCAGTGCTTGGGGAGCCC...CTCCTGCTGTATAGCCCAGGCTGGCCCCAAGCTCTTAGCACCTTTCATGCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR-3UTR TCA 90 bp | GAGGCCAGTCTGCCAGCTCAGTGGGGGACAGGGCTCACTAGCAGGTCAACCATGCTAACCATACCAGAGTaGAAGCAAAGCTGTATTGGC | + |
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Preference number: 2 (lower is better) Translates to: EASLPAQWGTGLTSRSTMLTIPE*KQSCIG Trigger: GCCAATACAGCTTTGCTTTCACTCTGGTATGGTTAG...CATGGTTGACCTGCTAGTGAGCCCTGTCCCCCACTGAGCTGGCAGACTGGCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR-3UTR TCA 90 bp | GTCTGCCAGCTCAGTGGGGGACAGGGCTCACTAGCAGGTCAACCATGTGCTGCCAGGGATCAATTCATTTaGAACACAGCTCTCCAGTGT | + |
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Preference number: 2 (lower is better) Translates to: VCQLSGGQGSLAGQPCAARDQFI*NTALQC Trigger: ACACTGGAGAGCTGTGTTTCAAATGAATTGATCCCT...GGCAGCACATGGTTGACCTGCTAGTGAGCCCTGTCCCCCACTGAGCTGGCAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR-3UTR GCA 90 bp | GCTGGCCTAGAATGCTGTTTCAACCTGCCAAGTGCAGAGATTACAGGCATGCACTTTGACCTACTCGGGTaGCTTGGGCTGGGACTGCAC | + |
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Preference number: 2 (lower is better) Translates to: AGLECCFNLPSAEITGMHFDLLG*LGLGLH Trigger: GTGCAGTCCCAGCCCAAGGCACCCGAGTAGGTCAAA...GTGCATGCCTGTAATCTCTGCACTTGGCAGGTTGAAACAGCATTCTAGGCCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR-3UTR GCA 90 bp | TGGGCTCAAACATCTAGCTTTGGGAGTCTATCAGTCTCCAGCACTGGATGCTGGTATCCAGGATGGCCCTaGTCCTCCTTCCCCCAAAGT | + |
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Preference number: 2 (lower is better) Translates to: WAQTSSFGSLSVSSTGCWYPGWP*SSFPQS Trigger: ACTTTGGGGGAAGGAGGAGCAGGGCCATCCTGGATA...CCAGCATCCAGTGCTGGAGACTGATAGACTCCCAAAGCTAGATGTTTGAGCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR-3UTR CCA 90 bp | AGCCTCTGGGCAGTAAACCAAGCCTGGTGTGGGGAAAAGGCCATGTTTGACCAACAGGGCATTGGGTCATaGGAAGTCTTCATAGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: SLWAVNQAWCGEKAMFDQQGIGS*EVFIGL Trigger: CAGCCCTATGAAGACTTCCCATGACCCAATGCCCTG...TTGGTCAAACATGGCCTTTTCCCCACACCAGGCTTGGTTTACTGCCCAGAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR-3UTR TCA 90 bp | TCTTTCCCAGAAGGTGAAGGTGGAGACAGACCTGCTGCAAAGGCACCAAGAGGCATGCTTTTCAGACAGTaGGAGCTTGTTGCAATGGCT | + |
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Preference number: 2 (lower is better) Translates to: SFPEGEGGDRPAAKAPRGMLFRQ*ELVAMA Trigger: AGCCATTGCAACAAGCTCTCACTGTCTGAAAAGCAT...GCCTCTTGGTGCCTTTGCAGCAGGTCTGTCTCCACCTTCACCTTCTGGGAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR-3UTR CCA 90 bp | GGGACCCAACTCATTTTTAAACACTTTACCCTATGTCTGAAAGCCACAACCTTTTCGGGTGCCTTGGGCTaGGACTGCACCCTCGCCACT | + |
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Preference number: 2 (lower is better) Translates to: GTQLIFKHFTLCLKATTFSGALG*DCTLAT Trigger: AGTGGCGAGGGTGCAGTCCCAGCCCAAGGCACCCGA...AAAGGTTGTGGCTTTCAGACATAGGGTAAAGTGTTTAAAAATGAGTTGGGTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR-3UTR GCA 90 bp | AGCCTCTGGGCAGTAAACCAAGCCTGGTGTGGGGAAAAGGCCATGTTTGACCAACTAAGTGTGCACCACTaGATCTTAGCTTTTTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: SLWAVNQAWCGEKAMFDQLSVHH*ILAFSG Trigger: CCCAGAAAAAGCTAAGATGCAGTGGTGCACACTTAG...TTGGTCAAACATGGCCTTTTCCCCACACCAGGCTTGGTTTACTGCCCAGAGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR-3UTR CCA 90 bp | TGGGCTCAAACATCTAGCTTTGGGAGTCTATCAGTCTCCAGCACTGGATGCTGGGCTGCCTTTCTTCAGTaGGTCAGTGTCAACATCCTA | + |
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Preference number: 2 (lower is better) Translates to: WAQTSSFGSLSVSSTGCWAAFLQ*VSVNIL Trigger: TAGGATGTTGACACTGACCCACTGAAGAAAGGCAGC...CCAGCATCCAGTGCTGGAGACTGATAGACTCCCAAAGCTAGATGTTTGAGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR-3UTR TCA 90 bp | AAAGAGTTGGCTTATGGGCTCAAACATCTAGCTTTGGGAGTCTATCAGTCTCCAGTCTTTCCCAGAAGGTaGAGGTGGAGACAGACCTGC | + |
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Preference number: 2 (lower is better) Translates to: KELAYGLKHLALGVYQSPVFPRR*RWRQTC Trigger: GCAGGTCTGTCTCCACCTTCACCTTCTGGGAAAGAC...TGGAGACTGATAGACTCCCAAAGCTAGATGTTTGAGCCCATAAGCCAACTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR-3UTR CCA 90 bp | TGGGCTCAAACATCTAGCTTTGGGAGTCTATCAGTCTCCAGCACTGGATGCTGGTTACAAAGGGTTCTGTaGGGCAGAAGAATTCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: WAQTSSFGSLSVSSTGCWLQRVL*GRRIQR Trigger: CCTCTGAATTCTTCTGCCCCACAGAACCCTTTGTAA...CCAGCATCCAGTGCTGGAGACTGATAGACTCCCAAAGCTAGATGTTTGAGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR-3UTR CCA 90 bp | CAAGGCATGAAAGGTGCTAAGAGCTTGGGGCCAGCCTGGGCTATACAGCAGGAGCATGCACCACTAGCCTaGATTCTGTTTTTAAATAAA | + |
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Preference number: 2 (lower is better) Translates to: QGMKGAKSLGPAWAIQQEHAPLA*ILFLNK Trigger: TTTATTTAAAAACAGAATCCAGGCTAGTGGTGCATG...CTCCTGCTGTATAGCCCAGGCTGGCCCCAAGCTCTTAGCACCTTTCATGCCTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR-3UTR TCA 90 bp | AAAGAGTTGGCTTATGGGCTCAAACATCTAGCTTTGGGAGTCTATCAGTCTCCAGGAAAAGGCCATGTTTaGCCAAGTAGAAAAATGACC | + |
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Preference number: 2 (lower is better) Translates to: KELAYGLKHLALGVYQSPGKGHV*PSRKMT Trigger: GGTCATTTTTCTACTTGGTCAAACATGGCCTTTTCC...TGGAGACTGATAGACTCCCAAAGCTAGATGTTTGAGCCCATAAGCCAACTCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR GCA 72 bp | GCACGTTTGACCTACTCGGGTGCCTTGGGCTGGGACTaGACCCTCGCCACTCAGCCTCCGCAGGTGCCTCTC | + |
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Preference number: 3 (lower is better) Translates to: ARLTYSGALGWD*TLATQPPQVPL Trigger: GAGAGGCACCTGCGGAGGCTGAGTGGCGAGGGTGCAGTCCCAGCCCAAGGCACCCGAGTAGGTCAAACGTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR-3UTR CAA 90 bp | ACAGCTCTCCAGTGTTGCAGGCAGGGGCAAAACAGGGCTCTGTGGAAGTCTGAGCCCTCCAGGAAATGCTaGAGAGGGGCCACGCCCGCC | + |
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Preference number: 3 (lower is better) Translates to: TALQCCRQGQNRALWKSEPSRKC*RGATPA Trigger: GGCGGGCGTGGCCCCTCTCAAGCATTTCCTGGAGGG...CTCAGACTTCCACAGAGCCCTGTTTTGCCCCTGCCTGCAACACTGGAGAGCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR TCA 72 bp | GAGCTTGTTGCAATGGCTGGAGGCTGCACTGGTGGCTaGGAGCACCCCTTGCCTGCCCGCAACTCCTTCCCT | + |
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Preference number: 3 (lower is better) Translates to: ELVAMAGGCTGG*EHPLPARNSFP Trigger: AGGGAAGGAGTTGCGGGCAGGCAAGGGGTGCTCTCAGCCACCAGTGCAGCCTCCAGCCATTGCAACAAGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR GCA 72 bp | TGGCTGGAGGCTGCACTGGTGGCTGAGAGCACCCCTTaGCTGCCCGCAACTCCTTCCCTCCAGGAAATGCTT | + |
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Preference number: 3 (lower is better) Translates to: WLEAALVAESTP*LPATPSLQEML Trigger: AAGCATTTCCTGGAGGGAAGGAGTTGCGGGCAGGCAAGGGGTGCTCTCAGCCACCAGTGCAGCCTCCAGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR GCA 72 bp | TGGAGGCTGCACTGGTGGCTGAGAGCACCCCTTGCCTaGCCGCAACTCCTTCCCTCCAGGAAATGCTTGAGA | + |
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Preference number: 3 (lower is better) Translates to: WRLHWWLRAPLA*PQLLPSRKCLR Trigger: TCTCAAGCATTTCCTGGAGGGAAGGAGTTGCGGGCAGGCAAGGGGTGCTCTCAGCCACCAGTGCAGCCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR CCA 72 bp | GTGAGAGCTTGTTGCAATGGCTGGAGGCTGCACTGGTaGCTGAGAGCACCCCTTGCCTGCCCGCAACTCCTT | + |
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Preference number: 3 (lower is better) Translates to: VRACCNGWRLHW*LRAPLACPQLL Trigger: AAGGAGTTGCGGGCAGGCAAGGGGTGCTCTCAGCCACCAGTGCAGCCTCCAGCCATTGCAACAAGCTCTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR CCA 72 bp | ACAGTGAGAGCTTGTTGCAATGGCTGGAGGCTGCACTaGTGGCTGAGAGCACCCCTTGCCTGCCCGCAACTC | + |
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Preference number: 3 (lower is better) Translates to: TVRACCNGWRLH*WLRAPLACPQL Trigger: GAGTTGCGGGCAGGCAAGGGGTGCTCTCAGCCACCAGTGCAGCCTCCAGCCATTGCAACAAGCTCTCACTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR CCA 72 bp | AAAATAGCACGTTTGACCTACTCGGGTGCCTTGGGCTaGGACTGCACCCTCGCCACTCAGCCTCCGCAGGTG | + |
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Preference number: 3 (lower is better) Translates to: KIARLTYSGALG*DCTLATQPPQV Trigger: CACCTGCGGAGGCTGAGTGGCGAGGGTGCAGTCCCAGCCCAAGGCACCCGAGTAGGTCAAACGTGCTATTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR CCA 72 bp | CCCCTGGGAAGCTTCCCCGACCAGGGCATTGGGTCATaGGAAGTCTTCATAGGGCTGGTGACATCCCTCAGG | + |
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Preference number: 3 (lower is better) Translates to: PLGSFPDQGIGS*EVFIGLVTSLR Trigger: CCTGAGGGATGTCACCAGCCCTATGAAGACTTCCCATGACCCAATGCCCTGGTCGGGGAAGCTTCCCAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR CCA 72 bp | AGACCTGCTGCAAAGGCACCAAGAGGCAAAGTCCCCTaGGAAGCTTCCCCGACCAGGGCATTGGGTCATGGG | + |
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Preference number: 3 (lower is better) Translates to: RPAAKAPRGKVP*EASPTRALGHG Trigger: CCCATGACCCAATGCCCTGGTCGGGGAAGCTTCCCAGGGGACTTTGCCTCTTGGTGCCTTTGCAGCAGGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
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| 3UTR GCA 72 bp | AGGCCAAGTGGAAAAGCCCAGCCTTCTCCGGAGTGGTaGCAGTGCCCAGTCCCAGGTTACTGTGCTACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: RPSGKAQPSPEW*QCPVPGYCATA Trigger: TGCTGTAGCACAGTAACCTGGGACTGGGCACTGGCACCACTCCGGAGAAGGCTGGGCTTTTCCACTTGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| 3UTR GCA 72 bp | AGGGTTCTGTGGGGCAGAAGAATTCAGAGGCCAGTCTaGCAGCTCAGTGGGGGACAGGGCTCACTAGCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: RVLWGRRIQRPV*QLSGGQGSLAG Trigger: ACCTGCTAGTGAGCCCTGTCCCCCACTGAGCTGGCAGACTGGCCTCTGAATTCTTCTGCCCCACAGAACCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| 3UTR CCA 72 bp | GGGCAGAAGAATTCAGAGGCCAGTCTGCCAGCTCAGTaGGGGACAGGGCTCACTAGCAGGTCAACCATGTGC | + |
|
Preference number: 3 (lower is better) Translates to: GQKNSEASLPAQ*GTGLTSRSTMC Trigger: GCACATGGTTGACCTGCTAGTGAGCCCTGTCCCCCACTGAGCTGGCAGACTGGCCTCTGAATTCTTCTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| 3UTR GCA 72 bp | AGTGGAAAAGCCCAGCCTTCTCCGGAGTGGTGCCAGTaGCCAGTCCCAGGTTACTGTGCTACAGCAGAGATC | + |
|
Preference number: 3 (lower is better) Translates to: SGKAQPSPEWCQ*PVPGYCATAEI Trigger: GATCTCTGCTGTAGCACAGTAACCTGGGACTGGGCACTGGCACCACTCCGGAGAAGGCTGGGCTTTTCCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| 3UTR CCA 72 bp | CAAGGCATGAAAGGTGCTAAGAGCTTGGGGCCAGCCTaGGCTATACAGCAGGAGCCTGTCTTCCCCAAACCC | + |
|
Preference number: 3 (lower is better) Translates to: QGMKGAKSLGPA*AIQQEPVFPKP Trigger: GGGTTTGGGGAAGACAGGCTCCTGCTGTATAGCCCAGGCTGGCCCCAAGCTCTTAGCACCTTTCATGCCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| 3UTR-3UTR CAA 90 bp | CAAGGCATGAAAGGTGCTAAGAGCTTGGGGCCAGCCTGGGCTATACAGCAGGAGTCAGACAGTGAGAGCTaGTTGCAATGGCTGGAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: QGMKGAKSLGPAWAIQQESDSES*LQWLEA Trigger: AGCCTCCAGCCATTGCAACAAGCTCTCACTGTCTGA...CTCCTGCTGTATAGCCCAGGCTGGCCCCAAGCTCTTAGCACCTTTCATGCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| 3UTR CCA 72 bp | CCAACCCTAGGCATTGTGGCTCAGCCTGCCCAGTTCTaGGACTACCTAAGTGTGCACCACTGCATCTTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: PTLGIVAQPAQF*DYLSVHHCILA Trigger: AGCTAAGATGCAGTGGTGCACACTTAGGTAGTCCCAGAACTGGGCAGGCTGAGCCACAATGCCTAGGGTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| 3UTR CCA 72 bp | TGTTGGCATTTCCAGGGCTCTGGGCTCCCCAAGCACTaGGGAAGAAGGGAAAAGATCCTTAGGCATGTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: CWHFQGSGLPKH*GRREKILRHVL Trigger: TAAGACATGCCTAAGGATCTTTTCCCTTCTTCCCCAGTGCTTGGGGAGCCCAGAGCCCTGGAAATGCCAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| 3UTR CCA 72 bp | TGGCCTCAAGAGAGCCTCTGGGCAGTAAACCAAGCCTaGTGTGGGGAAAAGGCCATGTTTGACCAAGTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: WPQESLWAVNQA*CGEKAMFDQVE Trigger: TTCTACTTGGTCAAACATGGCCTTTTCCCCACACCAGGCTTGGTTTACTGCCCAGAGGCTCTCTTGAGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| 3UTR-3UTR CAA 90 bp | GGGACCCAACTCATTTTTAAACACTTTACCCTATGTCTGAAAGCCACAACCTTTGGGGCCACGCCCGCCTaGAGGCCCCATCTTGTATGG | + |
|
Preference number: 3 (lower is better) Translates to: GTQLIFKHFTLCLKATTFGATPA*RPHLVW Trigger: CCATACAAGATGGGGCCTCAAGGCGGGCGTGGCCCC...AAAGGTTGTGGCTTTCAGACATAGGGTAAAGTGTTTAAAAATGAGTTGGGTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| 3UTR-3UTR CAA 90 bp | GGGACCCAACTCATTTTTAAACACTTTACCCTATGTCTGAAAGCCACAACCTTTACCTACTCGGGTGCCTaGGGCTGGGACTGCACCCTC | + |
|
Preference number: 3 (lower is better) Translates to: GTQLIFKHFTLCLKATTFTYSGA*GWDCTL Trigger: GAGGGTGCAGTCCCAGCCCAAGGCACCCGAGTAGGT...AAAGGTTGTGGCTTTCAGACATAGGGTAAAGTGTTTAAAAATGAGTTGGGTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| 3UTR TCA 72 bp | GCAGAGATCCTAAGCATTAGAGTCTTTCCCAGAAGGTaGAGGTGGAGACAGACCTGCTGCAAAGGCACCAAG | + |
|
Preference number: 3 (lower is better) Translates to: AEILSIRVFPRR*RWRQTCCKGTK Trigger: CTTGGTGCCTTTGCAGCAGGTCTGTCTCCACCTTCACCTTCTGGGAAAGACTCTAATGCTTAGGATCTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| 3UTR TCA 72 bp | AGCACTGGATGCTGGGGTCCCTCCTTATCTATAAGTTaGCACTCTCTGATCACAGGGGTCTTTCCCAACACC | + |
|
Preference number: 3 (lower is better) Translates to: STGCWGPSLSIS*HSLITGVFPNT Trigger: GGTGTTGGGAAAGACCCCTGTGATCAGAGAGTGTCAACTTATAGATAAGGAGGGACCCCAGCATCCAGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| 3UTR GCA 72 bp | CTAGGCTGGCCTAGAATGCTGTTTCAACCTGCCAAGTaGAGAGATTACAGGCATGCACCACTAGCCTGGATT | + |
|
Preference number: 3 (lower is better) Translates to: LGWPRMLFQPAK*RDYRHAPLAWI Trigger: AATCCAGGCTAGTGGTGCATGCCTGTAATCTCTGCACTTGGCAGGTTGAAACAGCATTCTAGGCCAGCCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| 3UTR CCA 72 bp | CTATGTCTGAAAGCCACAACCTTTGTACCTTTAGGATaGGGGACAGCCCTCAAGGCAGTCACCACTGTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LCLKATTFVPLG*GTALKAVTTVE Trigger: TTCTACAGTGGTGACTGCCTTGAGGGCTGTCCCCCATCCTAAAGGTACAAAGGTTGTGGCTTTCAGACATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| 3UTR GCA 72 bp | CAACACCTATCCTTACAAGGCCATCAGAAAGGAAGCTaGCTTTCTTCAGTGGGTCAGTGTCAACATCCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: QHLSLQGHQKGS*LSSVGQCQHPR Trigger: CCTAGGATGTTGACACTGACCCACTGAAGAAAGGCAGCTTCCTTTCTGATGGCCTTGTAAGGATAGGTGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| 3UTR TCA 72 bp | AAGCCAACCACCAAAAAGTCTAGGGATCAATTCATTTaGAACACAGCTCTCCAGTGTTGCAGGCAGGGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: KPTTKKSRDQFI*NTALQCCRQGQ Trigger: TTGCCCCTGCCTGCAACACTGGAGAGCTGTGTTTCAAATGAATTGATCCCTAGACTTTTTGGTGGTTGGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| 3UTR CCA 72 bp | CTACCTAAGTGTGCACCACTGCATCTTAGCTTTTTCTaGGGACCCAACTCATTTTTAAACACTTTACCCTAT | + |
|
Preference number: 3 (lower is better) Translates to: LPKCAPLHLSFF*GPNSFLNTLPY Trigger: ATAGGGTAAAGTGTTTAAAAATGAGTTGGGTCCCCAGAAAAAGCTAAGATGCAGTGGTGCACACTTAGGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| 3UTR CAA 72 bp | CTTGCCTGCCCGCAACTCCTTCCCTCCAGGAAATGCTaGAGAGGGGCCACGCCCGCCTTGAGGCCCCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LACPQLLPSRKC*RGATPALRPHL Trigger: AAGATGGGGCCTCAAGGCGGGCGTGGCCCCTCTCAAGCATTTCCTGGAGGGAAGGAGTTGCGGGCAGGCAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| CDS-3UTR CCA 90 bp | AGTCTGCCAGCTCAGTGGGGGACAGGGCTCACTAGCAGGTCAACCATGTGCTGCACCAGGTCTCATGCTTaGTCCCTGGTGCCAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLPAQWGTGLTSRSTMCCTRSHA*SLVPGG Trigger: CCCACCTGGCACCAGGGACCAAGCATGAGACCTGGT...GCAGCACATGGTTGACCTGCTAGTGAGCCCTGTCCCCCACTGAGCTGGCAGACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| 3UTR CAA 72 bp | TTTGGGAAAATAGCACGTTTGACCTACTCGGGTGCCTaGGGCTGGGACTGCACCCTCGCCACTCAGCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: FGKIARLTYSGA*GWDCTLATQPP Trigger: CGGAGGCTGAGTGGCGAGGGTGCAGTCCCAGCCCAAGGCACCCGAGTAGGTCAAACGTGCTATTTTCCCAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| 3UTR CAA 72 bp | GAAAGCAGGCCGAGGCTTCGTCATAGCTCTGTGCTGTaGGCATTTCCAGGGCTCTGGGCTCCCCAAGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: ESRPRLRHSSVL*AFPGLWAPQAL Trigger: CAGTGCTTGGGGAGCCCAGAGCCCTGGAAATGCCAACAGCACAGAGCTATGACGAAGCCTCGGCCTGCTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| CDS-3UTR CCA 90 bp | ACAGCTCTCCAGTGTTGCAGGCAGGGGCAAAACAGGGCTCTGTGGAAGTCTGAGCTCATGCTTGGTCCCTaGTGCCAGGTGGGTGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: TALQCCRQGQNRALWKSELMLGP*CQVGDD Trigger: GTCATCACCCACCTGGCACCAGGGACCAAGCATGAG...CTCAGACTTCCACAGAGCCCTGTTTTGCCCCTGCCTGCAACACTGGAGAGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| CDS-3UTR CCA 90 bp | GCTGGCCTAGAATGCTGTTTCAACCTGCCAAGTGCAGAGATTACAGGCATGCACGGGGTGATGAAGCCGTaGCCCTTGGACCGGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AGLECCFNLPSAEITGMHGVMKP*PLDRQK Trigger: CTTCTGCCGGTCCAAGGGCCACGGCTTCATCACCCC...GTGCATGCCTGTAATCTCTGCACTTGGCAGGTTGAAACAGCATTCTAGGCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| 3UTR CAA 72 bp | CAAATAGGAAGCCAAGGCATGAAAGGTGCTAAGAGCTaGGGGCCAGCCTGGGCTATACAGCAGGAGCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QIGSQGMKGAKS*GPAWAIQQEPV Trigger: GACAGGCTCCTGCTGTATAGCCCAGGCTGGCCCCAAGCTCTTAGCACCTTTCATGCCTTGGCTTCCTATTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| CDS-3UTR TCA 90 bp | TTTGAAACACAGCTCTCCAGTGTTGCAGGCAGGGGCAAAACAGGGCTCTGTGGAAGCACATCTTATAGGTaGCTTCGTCGCCTTCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: FETQLSSVAGRGKTGLCGSTSYR*LRRLPP Trigger: CGGTGGAAGGCGACGAAGTCACCTATAAGATGTGCT...TCCACAGAGCCCTGTTTTGCCCCTGCCTGCAACACTGGAGAGCTGTGTTTCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| CDS-3UTR GCA 90 bp | TTAGAGAATATACCTTTGATTTCTCCTTCAACACCTATCCTTACAAGGCCATCACCAGACCAGGTCTCATaGTTGGTCCCTGGTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LENIPLISPSTPILTRPSPDQVS*LVPGAR Trigger: CCTGGCACCAGGGACCAAGCATGAGACCTGGTCTGG...TGATGGCCTTGTAAGGATAGGTGTTGAAGGAGAAATCAAAGGTATATTCTCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| CDS-3UTR GCA 90 bp | TTAGAGAATATACCTTTGATTTCTCCTTCAACACCTATCCTTACAAGGCCATCAACCACCTCTACAGCCTaGAGCTTCTCGTTCTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LENIPLISPSTPILTRPSTTSTA*SFSFLG Trigger: ACCCAAGAACGAGAAGCTGCAGGCTGTAGAGGTGGT...TGATGGCCTTGTAAGGATAGGTGTTGAAGGAGAAATCAAAGGTATATTCTCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| 3UTR CAA 72 bp | GAAAAGATCCTTAGGCATGTCTTAGAGAATATACCTTaGATTTCTCCTTCAACACCTATCCTTACAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EKILRHVLENIP*ISPSTPILTRP Trigger: TGGCCTTGTAAGGATAGGTGTTGAAGGAGAAATCAAAGGTATATTCTCTAAGACATGCCTAAGGATCTTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| CDS TCA 90 bp | ACAGACTCCTTTGTAGACGGGGCCCTGCGAAGCCCGCACTGTCGCTaGGAAGGTCCTTGTCCGGCGGGTAGGCAGAGGGCTAGGGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: TDSFVDGALRSPHCR*EGPCPAGRQRARDH Trigger: GTGGTCCCTAGCCCTCTGCCTACCCGCCGGACAAGGACCTTCTCAGCGACAGTGCGGGCTTCGCAGGGCCCCGTCTACAAAGGAGTCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| CDS-3UTR CAA 90 bp | CGACCAGGGCATTGGGTCATGGGAAGTCTTCATAGGGCTGGTGACATCCCTCAGGACCAGGTCTCATGCTaGGTCCCTGGTGCCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RPGHWVMGSLHRAGDIPQDQVSC*VPGARW Trigger: CCACCTGGCACCAGGGACCAAGCATGAGACCTGGTC...CTGAGGGATGTCACCAGCCCTATGAAGACTTCCCATGACCCAATGCCCTGGTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| CDS GCA 90 bp | GTTGCTGATGACGTGCCCAGACCAGGTCTCATGCTTGGTCCCTGGTaGCAGGTGGGTGATGACCACCTCTACAGCCTGCAGCTTCTCGTT | + |
|
Preference number: 5 (lower is better) Translates to: VADDVPRPGLMLGPW*QVGDDHLYSLQLLV Trigger: AACGAGAAGCTGCAGGCTGTAGAGGTGGTCATCACCCACCTGGCACCAGGGACCAAGCATGAGACCTGGTCTGGGCACGTCATCAGCAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| CDS CCA 90 bp | ATGACGTGCCCAGACCAGGTCTCATGCTTGGTCCCTGGTGCCAGGTaGGTGATGACCACCTCTACAGCCTGCAGCTTCTCGTTCTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: MTCPDQVSCLVPGAR*VMTTSTACSFSFLG Trigger: ACCCAAGAACGAGAAGCTGCAGGCTGTAGAGGTGGTCATCACCCACCTGGCACCAGGGACCAAGCATGAGACCTGGTCTGGGCACGTCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| CDS CCA 90 bp | CTAGTTGCTGATGACGTGCCCAGACCAGGTCTCATGCTTGGTCCCTaGTGCCAGGTGGGTGATGACCACCTCTACAGCCTGCAGCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LVADDVPRPGLMLGP*CQVGDDHLYSLQLL Trigger: GAGAAGCTGCAGGCTGTAGAGGTGGTCATCACCCACCTGGCACCAGGGACCAAGCATGAGACCTGGTCTGGGCACGTCATCAGCAACTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| CDS-3UTR CAA 90 bp | CTGTGGGGCAGAAGAATTCAGAGGCCAGTCTGCCAGCTCAGTGGGGGACAGGGCTGCAGCTTCTCGTTCTaGGGTGGGATAGAGCACATC | + |
|
Preference number: 5 (lower is better) Translates to: LWGRRIQRPVCQLSGGQGCSFSF*GGIEHI Trigger: GATGTGCTCTATCCCACCCAAGAACGAGAAGCTGCA...GCCCTGTCCCCCACTGAGCTGGCAGACTGGCCTCTGAATTCTTCTGCCCCACAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| CDS-3UTR CAA 90 bp | CAAGGCATGAAAGGTGCTAAGAGCTTGGGGCCAGCCTGGGCTATACAGCAGGAGATGAAGCCGTGGCCCTaGGACCGGCAGAAGCATTTA | + |
|
Preference number: 5 (lower is better) Translates to: QGMKGAKSLGPAWAIQQEMKPWP*DRQKHL Trigger: TAAATGCTTCTGCCGGTCCAAGGGCCACGGCTTCAT...CTCCTGCTGTATAGCCCAGGCTGGCCCCAAGCTCTTAGCACCTTTCATGCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| CDS CCA 90 bp | GTGGGTGATGACCACCTCTACAGCCTGCAGCTTCTCGTTCTTGGGTaGGATAGAGCACATCTTATAGGTGACTTCGTCGCCTTCCACCGG | + |
|
Preference number: 5 (lower is better) Translates to: VGDDHLYSLQLLVLG*DRAHLIGDFVAFHR Trigger: CCGGTGGAAGGCGACGAAGTCACCTATAAGATGTGCTCTATCCCACCCAAGAACGAGAAGCTGCAGGCTGTAGAGGTGGTCATCACCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| CDS CCA 90 bp | TTCCACATCAGAGATGTGCAGGAAGATGTCAGGACCACCATCAGCTaGGGTGATGAAGCCGTGGCCCTTGGACCGGCAGAAGCATTTACA | + |
|
Preference number: 5 (lower is better) Translates to: FHIRDVQEDVRTTIS*GDEAVALGPAEAFT Trigger: TGTAAATGCTTCTGCCGGTCCAAGGGCCACGGCTTCATCACCCCAGCTGATGGTGGTCCTGACATCTTCCTGCACATCTCTGATGTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| CDS TCA 72 bp | TTTGTAGACGGGGCCCTGCGAAGCCCGCACTGTCGCTaGGAAGGTCCTTGTCCGGCGGGTAGGCAGAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: FVDGALRSPHCR*EGPCPAGRQRA Trigger: AGCCCTCTGCCTACCCGCCGGACAAGGACCTTCTCAGCGACAGTGCGGGCTTCGCAGGGCCCCGTCTACAAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| CDS GCA 72 bp | GACGTGCCCAGACCAGGTCTCATGCTTGGTCCCTGGTaGCAGGTGGGTGATGACCACCTCTACAGCCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: DVPRPGLMLGPW*QVGDDHLYSLQ Trigger: CTGCAGGCTGTAGAGGTGGTCATCACCCACCTGGCACCAGGGACCAAGCATGAGACCTGGTCTGGGCACGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| CDS CCA 72 bp | GAGGGGTATCCAATAGCCCTACAGAAGTCTGATGCGTaGGGGGCTGCAGCGGCGGTGGAGGAGGCTCAGATG | + |
|
Preference number: 6 (lower is better) Translates to: EGYPIALQKSDA*GAAAAVEEAQM Trigger: CATCTGAGCCTCCTCCACCGCCGCTGCAGCCCCCCACGCATCAGACTTCTGTAGGGCTATTGGATACCCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| CDS CCA 72 bp | CCAGACCAGGTCTCATGCTTGGTCCCTGGTGCCAGGTaGGTGATGACCACCTCTACAGCCTGCAGCTTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: PDQVSCLVPGAR*VMTTSTACSFS Trigger: CGAGAAGCTGCAGGCTGTAGAGGTGGTCATCACCCACCTGGCACCAGGGACCAAGCATGAGACCTGGTCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| CDS CCA 72 bp | GATGACGTGCCCAGACCAGGTCTCATGCTTGGTCCCTaGTGCCAGGTGGGTGATGACCACCTCTACAGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: DDVPRPGLMLGP*CQVGDDHLYSL Trigger: CAGGCTGTAGAGGTGGTCATCACCCACCTGGCACCAGGGACCAAGCATGAGACCTGGTCTGGGCACGTCATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| CDS GCA 72 bp | CCTGGTGCCAGGTGGGTGATGACCACCTCTACAGCCTaGAGCTTCTCGTTCTTGGGTGGGATAGAGCACATC | + |
|
Preference number: 6 (lower is better) Translates to: PGARWVMTTSTA*SFSFLGGIEHI Trigger: GATGTGCTCTATCCCACCCAAGAACGAGAAGCTGCAGGCTGTAGAGGTGGTCATCACCCACCTGGCACCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||
| CDS CCA 72 bp | GACCACCTCTACAGCCTGCAGCTTCTCGTTCTTGGGTaGGATAGAGCACATCTTATAGGTGACTTCGTCGCC | + |
|
Preference number: 6 (lower is better) Translates to: DHLYSLQLLVLG*DRAHLIGDFVA Trigger: GGCGACGAAGTCACCTATAAGATGTGCTCTATCCCACCCAAGAACGAGAAGCTGCAGGCTGTAGAGGTGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008537.10 |
||