Pregenerated sensors for CAML (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021501Ensembl transcript IDs: ENSMUST00000021963.5
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGCAGGCTGAGACCTGTCTATCTAGTCGCCTAAAAGGACTAGCCTaGGCCTACAAGAGGGATTACAAATCTCAGACATTAGAGGAAAAG | + |
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Preference number: 1 (lower is better) Translates to: RQAETCLSSRLKGLA*AYKRDYKSQTLEEK Trigger: CTTTTCCTCTAATGTCTGAGATTTGTAATCCCTCTTGTAGGCCCAGGCTAGTCCTTTTAGGCGACTAGATAGACAGGTCTCAGCCTGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| 3UTR TCA 90 bp | TCGTTAGTGCTGTTCGTTAACCTAGTTGGTTACTCAGACCAGTACTaGTACAAAGTCAACCCTTTTAAATCAGGGAAACGATTACATTGG | + |
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Preference number: 1 (lower is better) Translates to: SLVLFVNLVGYSDQY*YKVNPFKSGKRLHW Trigger: CCAATGTAATCGTTTCCCTGATTTAAAAGGGTTGACTTTGTATCAGTACTGGTCTGAGTAACCAACTAGGTTAACGAACAGCACTAACGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| 3UTR CCA 90 bp | TGGGCCTACAAGAGGGATTACAAATCTCAGACATTAGAGGAAAAGTaGAAGATTGGACTTCTAATTAAACAAGAGAAATCGTTAGTGCTG | + |
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Preference number: 1 (lower is better) Translates to: WAYKRDYKSQTLEEK*KIGLLIKQEKSLVL Trigger: CAGCACTAACGATTTCTCTTGTTTAATTAGAAGTCCAATCTTCCACTTTTCCTCTAATGTCTGAGATTTGTAATCCCTCTTGTAGGCCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| 3UTR-3UTR TCA 90 bp | ACTAGCCTGGGCCTACAAGAGGGATTACAAATCTCAGACATTAGAGGAAAAGTGTACTCAGACCAGTACTaGTACAAAGTCAACCCTTTT | + |
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Preference number: 2 (lower is better) Translates to: TSLGLQEGLQISDIRGKVYSDQY*YKVNPF Trigger: AAAAGGGTTGACTTTGTATCAGTACTGGTCTGAGTA...CACTTTTCCTCTAATGTCTGAGATTTGTAATCCCTCTTGTAGGCCCAGGCTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| 3UTR CCA 72 bp | GAGACCTGTCTATCTAGTCGCCTAAAAGGACTAGCCTaGGCCTACAAGAGGGATTACAAATCTCAGACATTA | + |
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Preference number: 3 (lower is better) Translates to: ETCLSSRLKGLA*AYKRDYKSQTL Trigger: TAATGTCTGAGATTTGTAATCCCTCTTGTAGGCCCAGGCTAGTCCTTTTAGGCGACTAGATAGACAGGTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| CDS-3UTR TCA 90 bp | ACTAGCCTGGGCCTACAAGAGGGATTACAAATCTCAGACATTAGAGGAAAAGTGAGCTCCGCTCGCCGCTaGGAAGCCGACAGGCCCGAC | + |
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Preference number: 4 (lower is better) Translates to: TSLGLQEGLQISDIRGKVSSARR*EADRPD Trigger: GTCGGGCCTGTCGGCTTCTCAGCGGCGAGCGGAGCT...CACTTTTCCTCTAATGTCTGAGATTTGTAATCCCTCTTGTAGGCCCAGGCTAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| CDS-3UTR TCA 90 bp | AAATACAAAGTGCAGTCTTTTAGGCAGGCTGAGACCTGTCTATCTAGTCGCCTACCGCTCCCGGGCCTGTaGAAGCCCATGATCCGGTTG | + |
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Preference number: 4 (lower is better) Translates to: KYKVQSFRQAETCLSSRLPLPGL*KPMIRL Trigger: CAACCGGATCATGGGCTTTCACAGGCCCGGGAGCGG...TAGGCGACTAGATAGACAGGTCTCAGCCTGCCTAAAAGACTGCACTTTGTATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| CDS-3UTR CCA 90 bp | CTAGCCTGGGCCTACAAGAGGGATTACAAATCTCAGACATTAGAGGAAAAGTGGCTGTCAGGTCACCTCTaGTCCGCTGCCGGAGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: LAWAYKRDYKSQTLEEKWLSGHL*SAAGAQ Trigger: CTGAGCTCCGGCAGCGGACCAGAGGTGACCTGACAG...CCACTTTTCCTCTAATGTCTGAGATTTGTAATCCCTCTTGTAGGCCCAGGCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| CDS-3UTR TCA 90 bp | AAATACAAAGTGCAGTCTTTTAGGCAGGCTGAGACCTGTCTATCTAGTCGCCTAGTTGCTCGGAGTTCATaGGCAGCTTTCTCCTCCGCA | + |
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Preference number: 4 (lower is better) Translates to: KYKVQSFRQAETCLSSRLVARSS*AAFSSA Trigger: TGCGGAGGAGAAAGCTGCTCATGAACTCCGAGCAAC...TAGGCGACTAGATAGACAGGTCTCAGCCTGCCTAAAAGACTGCACTTTGTATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| CDS-3UTR TCA 90 bp | AAATACAAAGTGCAGTCTTTTAGGCAGGCTGAGACCTGTCTATCTAGTCGCCTATCCTCCTCCATCGACTaGATCACCAAGCACTACCCT | + |
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Preference number: 4 (lower is better) Translates to: KYKVQSFRQAETCLSSRLSSSID*ITKHYP Trigger: AGGGTAGTGCTTGGTGATTCAGTCGATGGAGGAGGA...TAGGCGACTAGATAGACAGGTCTCAGCCTGCCTAAAAGACTGCACTTTGTATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| CDS-3UTR GCA 90 bp | AAATACAAAGTGCAGTCTTTTAGGCAGGCTGAGACCTGTCTATCTAGTCGCCTAATCCGGTTGATGCGTTaGTCGGAGTTCATGAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: KYKVQSFRQAETCLSSRLIRLMR*SEFMSS Trigger: GCTGCTCATGAACTCCGAGCAACGCATCAACCGGAT...TAGGCGACTAGATAGACAGGTCTCAGCCTGCCTAAAAGACTGCACTTTGTATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| CDS-3UTR TCA 90 bp | CTAGCCTGGGCCTACAAGAGGGATTACAAATCTCAGACATTAGAGGAAAAGTGGAAACTGAAGGGATGCTaGGGGAGTTCAGTTTGTCAC | + |
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Preference number: 4 (lower is better) Translates to: LAWAYKRDYKSQTLEEKWKLKGC*GSSVCH Trigger: GTGACAAACTGAACTCCCTCAGCATCCCTTCAGTTT...CCACTTTTCCTCTAATGTCTGAGATTTGTAATCCCTCTTGTAGGCCCAGGCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| CDS-3UTR TCA 90 bp | AGGGATTACAAATCTCAGACATTAGAGGAAAAGTGGAAGATTGGACTTCTAATTCCAGCTGGGTTCCCCTaGCTTCTGCCACACCACCGA | + |
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Preference number: 4 (lower is better) Translates to: RDYKSQTLEEKWKIGLLIPAGFP*LLPHHR Trigger: TCGGTGGTGTGGCAGAAGTCAGGGGAACCCAGCTGG...AATTAGAAGTCCAATCTTCCACTTTTCCTCTAATGTCTGAGATTTGTAATCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| CDS-3UTR TCA 90 bp | ACTAGCCTGGGCCTACAAGAGGGATTACAAATCTCAGACATTAGAGGAAAAGTGTGGTGCTTTAATGAATaGGTCCAGTTTGTCTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: TSLGLQEGLQISDIRGKVWCFNE*VQFVSQ Trigger: CTGGGAGACAAACTGGACTCATTCATTAAAGCACCA...CACTTTTCCTCTAATGTCTGAGATTTGTAATCCCTCTTGTAGGCCCAGGCTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| CDS-3UTR CCA 90 bp | ACTAGCCTGGGCCTACAAGAGGGATTACAAATCTCAGACATTAGAGGAAAAGTGTCGCTTCTTCGAATCTaGAAAGGTACTGTTCTAGGC | + |
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Preference number: 4 (lower is better) Translates to: TSLGLQEGLQISDIRGKVSLLRI*KGTVLG Trigger: GCCTAGAACAGTACCTTTCCAGATTCGAAGAAGCGA...CACTTTTCCTCTAATGTCTGAGATTTGTAATCCCTCTTGTAGGCCCAGGCTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| CDS-3UTR TCA 90 bp | AGGGATTACAAATCTCAGACATTAGAGGAAAAGTGGAAGATTGGACTTCTAATTTGCAAACAAAGGCTCTaGCGCCAAGAGCGAGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: RDYKSQTLEEKWKIGLLICKQRL*RQERAE Trigger: CTCTGCTCGCTCTTGGCGTCAGAGCCTTTGTTTGCA...AATTAGAAGTCCAATCTTCCACTTTTCCTCTAATGTCTGAGATTTGTAATCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| CDS-3UTR CCA 90 bp | AAGTGGAAGATTGGACTTCTAATTAAACAAGAGAAATCGTTAGTGCTGTTCGTTAGTTTGTCTCCCAGCTaGGTTCCCCTGACTTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: KWKIGLLIKQEKSLVLFVSLSPS*VPLTSA Trigger: GGCAGAAGTCAGGGGAACCCAGCTGGGAGACAAACT...AACGAACAGCACTAACGATTTCTCTTGTTTAATTAGAAGTCCAATCTTCCACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| CDS-3UTR CCA 90 bp | CTGCAGTGTAAAAGAGAAGTTGTTGTCATTTGTAAACTTCTAAGTTCCTCGGGTGTACTTCCATCTTCCTaGCTGGGTTTCTCGCTGATC | + |
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Preference number: 4 (lower is better) Translates to: LQCKREVVVICKLLSSSGVLPSS*LGFSLI Trigger: GATCAGCGAGAAACCCAGCCAGGAAGATGGAAGTAC...ACCCGAGGAACTTAGAAGTTTACAAATGACAACAACTTCTCTTTTACACTGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| CDS-3UTR TCA 90 bp | ACTAGCCTGGGCCTACAAGAGGGATTACAAATCTCAGACATTAGAGGAAAAGTGACTGTCCTGTGGCTTTaGTTTTGTTTGATTTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: TSLGLQEGLQISDIRGKVTVLWL*FCLIFF Trigger: GAAGAAAATCAAACAAAATCAAAGCCACAGGACAGT...CACTTTTCCTCTAATGTCTGAGATTTGTAATCCCTCTTGTAGGCCCAGGCTAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| CDS-3UTR GCA 90 bp | GAAAAGTGGAAGATTGGACTTCTAATTAAACAAGAGAAATCGTTAGTGCTGTTCCCCATGTATGCAAGCTaGAAAGTGAGAAATGGAGCG | + |
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Preference number: 4 (lower is better) Translates to: EKWKIGLLIKQEKSLVLFPMYAS*KVRNGA Trigger: CGCTCCATTTCTCACTTTGCAGCTTGCATACATGGG...GAACAGCACTAACGATTTCTCTTGTTTAATTAGAAGTCCAATCTTCCACTTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| CDS TCA 90 bp | TCGGAGTTCATGAGCAGCTTTCTCCTCCGCAGCTCCGCTCGCCGCTaGGAAGCCGACAGGCCCGACGGCGTCGCGGGTCTTTCCCCGCCG | + |
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Preference number: 5 (lower is better) Translates to: SEFMSSFLLRSSARR*EADRPDGVAGLSPP Trigger: CGGCGGGGAAAGACCCGCGACGCCGTCGGGCCTGTCGGCTTCTCAGCGGCGAGCGGAGCTGCGGAGGAGAAAGCTGCTCATGAACTCCGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| CDS GCA 90 bp | GAAGCCCTCTGGGCCGGGTCTGCTGTCAGGTCACCTCTGGTCCGCTaGCGGAGCTCAGCTCCATCCTTACTACTGCACTCTGGTGCTTTA | + |
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Preference number: 5 (lower is better) Translates to: EALWAGSAVRSPLVR*RSSAPSLLLHSGAL Trigger: TAAAGCACCAGAGTGCAGTAGTAAGGATGGAGCTGAGCTCCGGCAGCGGACCAGAGGTGACCTGACAGCAGACCCGGCCCAGAGGGCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| CDS CCA 90 bp | TTGTCTCCCAGCTGGGTTCCCCTGACTTCTGCCACACCACCGAGCTaGTCAGCTCCTCCTCCATCGACTGAATCACCAAGCACTACCCTC | + |
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Preference number: 5 (lower is better) Translates to: LSPSWVPLTSATPPS*SAPPPSTESPSTTL Trigger: GAGGGTAGTGCTTGGTGATTCAGTCGATGGAGGAGGAGCTGACCAGCTCGGTGGTGTGGCAGAAGTCAGGGGAACCCAGCTGGGAGACAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| CDS TCA 90 bp | TTCATCGCTTCTTCGAATCTGGAAAGGTACTGTTCTAGGCCGTGGTaGGAAGCCCTCTGGGCCGGGTCTGCTGTCAGGTCACCTCTGGTC | + |
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Preference number: 5 (lower is better) Translates to: FIASSNLERYCSRPW*EALWAGSAVRSPLV Trigger: GACCAGAGGTGACCTGACAGCAGACCCGGCCCAGAGGGCTTCTCACCACGGCCTAGAACAGTACCTTTCCAGATTCGAAGAAGCGATGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| CDS CCA 90 bp | CTGCACTCTGGTGCTTTAATGAATGAGTCCAGTTTGTCTCCCAGCTaGGTTCCCCTGACTTCTGCCACACCACCGAGCTGGTCAGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: LHSGALMNESSLSPS*VPLTSATPPSWSAP Trigger: AGGAGCTGACCAGCTCGGTGGTGTGGCAGAAGTCAGGGGAACCCAGCTGGGAGACAAACTGGACTCATTCATTAAAGCACCAGAGTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| CDS TCA 90 bp | CAAACTCTTCCGCGGTACTTCCATCTTCCTGGCTGGGTTTCTCGCTaGTCAGCTGTTTGCGCAACTTCATCGCTTCTTCGAATCTGGAAA | + |
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Preference number: 5 (lower is better) Translates to: QTLPRYFHLPGWVSR*SAVCATSSLLRIWK Trigger: TTTCCAGATTCGAAGAAGCGATGAAGTTGCGCAAACAGCTGATCAGCGAGAAACCCAGCCAGGAAGATGGAAGTACCGCGGAAGAGTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| CDS-3UTR CAA 90 bp | CTAGCCTGGGCCTACAAGAGGGATTACAAATCTCAGACATTAGAGGAAAAGTGGAAGCCCATGATCCGGTaGATGCGTTGCTCGGAGTTC | + |
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Preference number: 5 (lower is better) Translates to: LAWAYKRDYKSQTLEEKWKPMIR*MRCSEF Trigger: GAACTCCGAGCAACGCATCAACCGGATCATGGGCTT...CCACTTTTCCTCTAATGTCTGAGATTTGTAATCCCTCTTGTAGGCCCAGGCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| CDS CCA 90 bp | AATATTCGAAAAGAGTCAAACTCTTCCGCGGTACTTCCATCTTCCTaGCTGGGTTTCTCGCTGATCAGCTGTTTGCGCAACTTCATCGCT | + |
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Preference number: 5 (lower is better) Translates to: NIRKESNSSAVLPSS*LGFSLISCLRNFIA Trigger: AGCGATGAAGTTGCGCAAACAGCTGATCAGCGAGAAACCCAGCCAGGAAGATGGAAGTACCGCGGAAGAGTTTGACTCTTTTCGAATATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| CDS-3UTR CAA 90 bp | GAAAAGTGGAAGATTGGACTTCTAATTAAACAAGAGAAATCGTTAGTGCTGTTCGATCCGGTTGATGCGTaGCTCGGAGTTCATGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: EKWKIGLLIKQEKSLVLFDPVDA*LGVHEQ Trigger: CTGCTCATGAACTCCGAGCAACGCATCAACCGGATC...GAACAGCACTAACGATTTCTCTTGTTTAATTAGAAGTCCAATCTTCCACTTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| CDS-3UTR CAA 90 bp | AAAGGACTAGCCTGGGCCTACAAGAGGGATTACAAATCTCAGACATTAGAGGAACCTGTGGCTTTGATTTaGTTTGATTTTCTTCTTCCG | + |
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Preference number: 5 (lower is better) Translates to: KGLAWAYKRDYKSQTLEEPVALI*FDFLLP Trigger: CGGAAGAAGAAAATCAAACAAAATCAAAGCCACAGG...TTCCTCTAATGTCTGAGATTTGTAATCCCTCTTGTAGGCCCAGGCTAGTCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| CDS-3UTR CAA 90 bp | GAAAAGTGGAAGATTGGACTTCTAATTAAACAAGAGAAATCGTTAGTGCTGTTCCCCTTAGGAAAATATTaGTATAGTCCCATGTATGCA | + |
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Preference number: 5 (lower is better) Translates to: EKWKIGLLIKQEKSLVLFPLGKY*YSPMYA Trigger: TGCATACATGGGACTATACAAATATTTTCCTAAGGG...GAACAGCACTAACGATTTCTCTTGTTTAATTAGAAGTCCAATCTTCCACTTTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| CDS TCA 72 bp | ATGAGCAGCTTTCTCCTCCGCAGCTCCGCTCGCCGCTaGGAAGCCGACAGGCCCGACGGCGTCGCGGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: MSSFLLRSSARR*EADRPDGVAGL Trigger: AAGACCCGCGACGCCGTCGGGCCTGTCGGCTTCTCAGCGGCGAGCGGAGCTGCGGAGGAGAAAGCTGCTCAT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| CDS CAA 90 bp | CGAGCCGCTCCCGGGCCTGTGAAAGCCCATGATCCGGTTGATGCGTaGCTCGGAGTTCATGAGCAGCTTTCTCCTCCGCAGCTCCGCTCG | + |
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Preference number: 6 (lower is better) Translates to: RAAPGPVKAHDPVDA*LGVHEQLSPPQLRS Trigger: CGAGCGGAGCTGCGGAGGAGAAAGCTGCTCATGAACTCCGAGCAACGCATCAACCGGATCATGGGCTTTCACAGGCCCGGGAGCGGCTCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| CDS GCA 72 bp | TGGGCCGGGTCTGCTGTCAGGTCACCTCTGGTCCGCTaGCGGAGCTCAGCTCCATCCTTACTACTGCACTCT | + |
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Preference number: 6 (lower is better) Translates to: WAGSAVRSPLVR*RSSAPSLLLHS Trigger: AGAGTGCAGTAGTAAGGATGGAGCTGAGCTCCGGCAGCGGACCAGAGGTGACCTGACAGCAGACCCGGCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| CDS GCA 72 bp | GTCCAGTTTGTCTCCCAGCTGGGTTCCCCTGACTTCTaGCACACCACCGAGCTGGTCAGCTCCTCCTCCATC | + |
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Preference number: 6 (lower is better) Translates to: VQFVSQLGSPDF*HTTELVSSSSI Trigger: GATGGAGGAGGAGCTGACCAGCTCGGTGGTGTGGCAGAAGTCAGGGGAACCCAGCTGGGAGACAAACTGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| CDS CCA 72 bp | AGCTGGGTTCCCCTGACTTCTGCCACACCACCGAGCTaGTCAGCTCCTCCTCCATCGACTGAATCACCAAGC | + |
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Preference number: 6 (lower is better) Translates to: SWVPLTSATPPS*SAPPPSTESPS Trigger: GCTTGGTGATTCAGTCGATGGAGGAGGAGCTGACCAGCTCGGTGGTGTGGCAGAAGTCAGGGGAACCCAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| CDS CAA 72 bp | CCCGGGCCTGTGAAAGCCCATGATCCGGTTGATGCGTaGCTCGGAGTTCATGAGCAGCTTTCTCCTCCGCAG | + |
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Preference number: 6 (lower is better) Translates to: PGPVKAHDPVDA*LGVHEQLSPPQ Trigger: CTGCGGAGGAGAAAGCTGCTCATGAACTCCGAGCAACGCATCAACCGGATCATGGGCTTTCACAGGCCCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| CDS TCA 72 bp | TCTTCGAATCTGGAAAGGTACTGTTCTAGGCCGTGGTaGGAAGCCCTCTGGGCCGGGTCTGCTGTCAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: SSNLERYCSRPW*EALWAGSAVRS Trigger: TGACCTGACAGCAGACCCGGCCCAGAGGGCTTCTCACCACGGCCTAGAACAGTACCTTTCCAGATTCGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| CDS CCA 72 bp | GGTGCTTTAATGAATGAGTCCAGTTTGTCTCCCAGCTaGGTTCCCCTGACTTCTGCCACACCACCGAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: GALMNESSLSPS*VPLTSATPPSW Trigger: CCAGCTCGGTGGTGTGGCAGAAGTCAGGGGAACCCAGCTGGGAGACAAACTGGACTCATTCATTAAAGCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| CDS CAA 90 bp | CCATCCTTACTACTGCACTCTGGTGCTTTAATGAATGAGTCCAGTTaGTCTCCCAGCTGGGTTCCCCTGACTTCTGCCACACCACCGAGC | + |
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Preference number: 6 (lower is better) Translates to: PSLLLHSGALMNESS*SPSWVPLTSATPPS Trigger: GCTCGGTGGTGTGGCAGAAGTCAGGGGAACCCAGCTGGGAGACAAACTGGACTCATTCATTAAAGCACCAGAGTGCAGTAGTAAGGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| CDS CCA 72 bp | TCAGCTGTTTGCGCAACTTCATCGCTTCTTCGAATCTaGAAAGGTACTGTTCTAGGCCGTGGTGAGAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: SAVCATSSLLRI*KGTVLGRGEKP Trigger: GGGCTTCTCACCACGGCCTAGAACAGTACCTTTCCAGATTCGAAGAAGCGATGAAGTTGCGCAAACAGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| CDS CCA 72 bp | AAAGAGTCAAACTCTTCCGCGGTACTTCCATCTTCCTaGCTGGGTTTCTCGCTGATCAGCTGTTTGCGCAAC | + |
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Preference number: 6 (lower is better) Translates to: KESNSSAVLPSS*LGFSLISCLRN Trigger: GTTGCGCAAACAGCTGATCAGCGAGAAACCCAGCCAGGAAGATGGAAGTACCGCGGAAGAGTTTGACTCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| CDS CAA 72 bp | CCATCTTCCTGGCTGGGTTTCTCGCTGATCAGCTGTTaGCGCAACTTCATCGCTTCTTCGAATCTGGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: PSSWLGFSLISC*RNFIASSNLER Trigger: CCTTTCCAGATTCGAAGAAGCGATGAAGTTGCGCAAACAGCTGATCAGCGAGAAACCCAGCCAGGAAGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| CDS CAA 90 bp | GCGGTACTTCCATCTTCCTGGCTGGGTTTCTCGCTGATCAGCTGTTaGCGCAACTTCATCGCTTCTTCGAATCTGGAAAGGTACTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: AVLPSSWLGFSLISC*RNFIASSNLERYCS Trigger: AGAACAGTACCTTTCCAGATTCGAAGAAGCGATGAAGTTGCGCAAACAGCTGATCAGCGAGAAACCCAGCCAGGAAGATGGAAGTACCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| CDS TCA 72 bp | CACCAAGCACTACCCTCTTTGAAACTGAAGGGATGCTaGGGGAGTTCAGTTTGTCACTGTCCTGTGGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: HQALPSLKLKGC*GSSVCHCPVAL Trigger: CAAAGCCACAGGACAGTGACAAACTGAACTCCCTCAGCATCCCTTCAGTTTCAAAGAGGGTAGTGCTTGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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| CDS CAA 90 bp | GTCAGCACCGTCGTCTTCACCTTCTTCTCGCCCTTAGGAAAATATTaGTATAGTCCCATGTATGCAAGCTGCAAAGTGAGAAATGGAGCG | + |
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Preference number: 6 (lower is better) Translates to: VSTVVFTFFSPLGKY*YSPMYASCKVRNGA Trigger: CGCTCCATTTCTCACTTTGCAGCTTGCATACATGGGACTATACAAATATTTTCCTAAGGGCGAGAAGAAGGTGAAGACGACGGTGCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021963.5 |
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