Pregenerated sensors for CALD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029761Ensembl transcript IDs: ENSMUST00000031775.13, ENSMUST00000079391.10, ENSMUST00000115021.8, ENSMUST00000115026.8, ENSMUST00000115027.8, ENSMUST00000123823.8, ENSMUST00000126181.8, ENSMUST00000136907.8, ENSMUST00000142512.8, ENSMUST00000142716.3, ENSMUST00000149009.8
Found 415 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGAGCGATTAGCCCTCTCCAACTGAGCTGGCCCAGCGAGATGGCTTaGAGTTGGGTTCTTTCTCCGATTGTTTCAGACCTTAGTGGGGGA | + |
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Preference number: 1 (lower is better) Translates to: RAISPLQLSWPSEMA*SWVLSPIVSDLSGG Trigger: TCCCCCACTAAGGTCTGAAACAATCGGAGAAAGAACCCAACTGCAAGCCATCTCGCTGGGCCAGCTCAGTTGGAGAGGGCTAATCGCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149009.8 |
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| 3UTR CCA 90 bp | ATTAGCCCTCTCCAACTGAGCTGGCCCAGCGAGATGGCTTGCAGTTaGGTTCTTTCTCCGATTGTTTCAGACCTTAGTGGGGGAAGTGAC | + |
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Preference number: 1 (lower is better) Translates to: ISPLQLSWPSEMACS*VLSPIVSDLSGGSD Trigger: GTCACTTCCCCCACTAAGGTCTGAAACAATCGGAGAAAGAACCCAACTGCAAGCCATCTCGCTGGGCCAGCTCAGTTGGAGAGGGCTAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149009.8 |
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| 3UTR GCA 90 bp | CGATTGTTTCAGACCTTAGTGGGGGAAGTGACCTTATCCACAGATTaGTTTTCCCAGAGGTTCCGCTTGCCAGATACATCTCCTGGCCTC | + |
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Preference number: 1 (lower is better) Translates to: RLFQTLVGEVTLSTD*FSQRFRLPDTSPGL Trigger: GAGGCCAGGAGATGTATCTGGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTCACTTCCCCCACTAAGGTCTGAAACAATCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149009.8 |
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| 3UTR CCA 90 bp | GAAAACATAAATATAAACAGAGCGATTAGCCCTCTCCAACTGAGCTaGCCCAGCGAGATGGCTTGCAGTTGGGTTCTTTCTCCGATTGTT | + |
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Preference number: 1 (lower is better) Translates to: ENININRAISPLQLS*PSEMACSWVLSPIV Trigger: AACAATCGGAGAAAGAACCCAACTGCAAGCCATCTCGCTGGGCCAGCTCAGTTGGAGAGGGCTAATCGCTCTGTTTATATTTATGTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| 3UTR GCA 90 bp | AGCGAGTTTACTTCACAGCATGGTTTCTTTAGAAACAGGCTCCTCTaGAAAGGCAGTACTTTGACCATGAACATCTCTAGTTGTGGTTAT | + |
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Preference number: 1 (lower is better) Translates to: SEFTSQHGFFRNRLL*KGSTLTMNISSCGY Trigger: ATAACCACAACTAGAGATGTTCATGGTCAAAGTACTGCCTTTGCAGAGGAGCCTGTTTCTAAAGAAACCATGCTGTGAAGTAAACTCGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| 3UTR-3UTR TCA 90 bp | TGCCATGCTTCTGCTCACGTTACCTGCCTGCTTCTACAGGAGGCAAAGTTGGTCTTAGCCCTCTCCAACTaGGCTGGCCCAGCGAGATGG | + |
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Preference number: 2 (lower is better) Translates to: CHASAHVTCLLLQEAKLVLALSN*AGPARW Trigger: CCATCTCGCTGGGCCAGCTCAGTTGGAGAGGGCTAA...GACCAACTTTGCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAGAAGCATGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| 3UTR-3UTR GCA 90 bp | TGCCATGCTTCTGCTCACGTTACCTGCCTGCTTCTACAGGAGGCAAAGTTGGTCCCCAGCGAGATGGCTTaGAGTTGGGTTCTTTCTCCG | + |
|
Preference number: 2 (lower is better) Translates to: CHASAHVTCLLLQEAKLVPSEMA*SWVLSP Trigger: CGGAGAAAGAACCCAACTGCAAGCCATCTCGCTGGG...GACCAACTTTGCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAGAAGCATGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCTCACGTTACCTGCCTGCTTCTACAGGAGGCAAAGTTGGTCTTTCTTTAGATTAGCCCTCTCCAACTaGGCTGGCCCAGCGAGATGG | + |
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Preference number: 2 (lower is better) Translates to: LLTLPACFYRRQSWSFFRLALSN*AGPARW Trigger: CCATCTCGCTGGGCCAGCTCAGTTGGAGAGGGCTAA...TCTAAAGAAAGACCAACTTTGCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| 3UTR-3UTR TCA 90 bp | ACTCCAACGATGGAAGTCATTTTCATGGGTGTGCCATGTGCACTCTGTTCGTCTGGGTGGGGGTGGGGGTaGACATCACGGTCGCAAATA | + |
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Preference number: 2 (lower is better) Translates to: TPTMEVIFMGVPCALCSSGWGWG*TSRSQI Trigger: TATTTGCGACCGTGATGTTCACCCCCACCCCCACCC...AGACGAACAGAGTGCACATGGCACACCCATGAAAATGACTTCCATCGTTGGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| 3UTR-3UTR CCA 90 bp | AAGATAGGACTGCCATGCTTCTGCTCACGTTACCTGCCTGCTTCTACAGGAGGCGCCAGATACATCTCCTaGCCTCAAGTCCTGACCAGA | + |
|
Preference number: 2 (lower is better) Translates to: KIGLPCFCSRYLPASTGGARYIS*PQVLTR Trigger: TCTGGTCAGGACTTGAGGCCAGGAGATGTATCTGGC...GCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAGAAGCATGGCAGTCCTATCTT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149009.8 |
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| 3UTR-3UTR TCA 90 bp | CTACGGGGTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGTTAGCCCTCTCCAACTaGGCTGGCCCAGCGAGATGG | + |
|
Preference number: 2 (lower is better) Translates to: LRGRFAPRYCIHSSDNLKLALSN*AGPARW Trigger: CCATCTCGCTGGGCCAGCTCAGTTGGAGAGGGCTAA...CTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGACCCCGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| 3UTR CAA 90 bp | CCGATTGTTTCAGACCTTAGTGGGGGAAGTGACCTTATCCACAGATaGCTTTTCCCAGAGGTTCCGCTTGCCAGATACATCTCCTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: PIVSDLSGGSDLIHR*LFPEVPLARYISWP Trigger: AGGCCAGGAGATGTATCTGGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTCACTTCCCCCACTAAGGTCTGAAACAATCGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149009.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGCCTGCTTCTACAGGAGGCAAAGTTGGTCTTTCTTTAGACATCTACATGAATTAGCCCTCTCCAACTaGGCTGGCCCAGCGAGATGG | + |
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Preference number: 2 (lower is better) Translates to: PACFYRRQSWSFFRHLHELALSN*AGPARW Trigger: CCATCTCGCTGGGCCAGCTCAGTTGGAGAGGGCTAA...TTCATGTAGATGTCTAAAGAAAGACCAACTTTGCCTCCTGTAGAAGCAGGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| 3UTR-3UTR TCA 90 bp | TCATTTTCATGGGTGTGCCATGTGCACTCTGTTCGTCTTACCATAGACTTGTGTGGGTGGGGGTGGGGGTaGACATCACGGTCGCAAATA | + |
|
Preference number: 2 (lower is better) Translates to: SFSWVCHVHSVRLTIDLCGWGWG*TSRSQI Trigger: TATTTGCGACCGTGATGTTCACCCCCACCCCCACCC...ACACAAGTCTATGGTAAGACGAACAGAGTGCACATGGCACACCCATGAAAATGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| 3UTR-3UTR TCA 90 bp | GGTAGAGAAGGAGACACCTTAGATATAATACAGGTCAACTTTTTGACGTGGGGTTTAGCCCTCTCCAACTaGGCTGGCCCAGCGAGATGG | + |
|
Preference number: 2 (lower is better) Translates to: GREGDTLDIIQVNFLTWGLALSN*AGPARW Trigger: CCATCTCGCTGGGCCAGCTCAGTTGGAGAGGGCTAA...ACCCCACGTCAAAAAGTTGACCTGTATTATATCTAAGGTGTCTCCTTCTCTACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| 3UTR-3UTR GCA 90 bp | CCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTGTTCATATGACAGTAGCGAGCCCAGCGAGATGGCTTaGAGTTGGGTTCTTTCTCCG | + |
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Preference number: 2 (lower is better) Translates to: PFVDFRCGWCHCSYDSSEPSEMA*SWVLSP Trigger: CGGAGAAAGAACCCAACTGCAAGCCATCTCGCTGGG...CTCGCTACTGTCATATGAACAGTGACACCAACCACATCGGAAGTCAACAAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| 3UTR-3UTR GCA 90 bp | GGCTCTCCTACTGTGGAAGGAGTGGAGACTAAGATAATTTTGGTTAAGTCAGCTCCCAGCGAGATGGCTTaGAGTTGGGTTCTTTCTCCG | + |
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Preference number: 2 (lower is better) Translates to: GSPTVEGVETKIILVKSAPSEMA*SWVLSP Trigger: CGGAGAAAGAACCCAACTGCAAGCCATCTCGCTGGG...AGCTGACTTAACCAAAATTATCTTAGTCTCCACTCCTTCCACAGTAGGAGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| 3UTR-3UTR TCA 90 bp | AAGATAGGACTGCCATGCTTCTGCTCACGTTACCTGCCTGCTTCTACAGGAGGCGCCCTACATCAGATATaGAGTGGATTATTTTCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: KIGLPCFCSRYLPASTGGALHQI*SGLFSE Trigger: CTCTGAAAATAATCCACTTCATATCTGATGTAGGGC...GCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAGAAGCATGGCAGTCCTATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| 3UTR-3UTR TCA 90 bp | CTCTTAAAGATAACAGAGAGCTGTAATCAAACAAGTAGAGGAGGAATTTGCTTCGGGTGGGGGTGGGGGTaGACATCACGGTCGCAAATA | + |
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Preference number: 2 (lower is better) Translates to: LLKITESCNQTSRGGICFGWGWG*TSRSQI Trigger: TATTTGCGACCGTGATGTTCACCCCCACCCCCACCC...GAAGCAAATTCCTCCTCTACTTGTTTGATTACAGCTCTCTGTTATCTTTAAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| 3UTR-3UTR GCA 90 bp | CCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTGTTCATATGACAGTAGCGAGAGAAACAGGCTCCTCTaGAAAGGCAGTACTTTGACC | + |
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Preference number: 2 (lower is better) Translates to: PFVDFRCGWCHCSYDSSERNRLL*KGSTLT Trigger: GGTCAAAGTACTGCCTTTGCAGAGGAGCCTGTTTCT...CTCGCTACTGTCATATGAACAGTGACACCAACCACATCGGAAGTCAACAAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| 3UTR-3UTR GCA 90 bp | CCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTGTTCATATGACAGTAGCGAGACCTTATCCACAGATTaGTTTTCCCAGAGGTTCCGC | + |
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Preference number: 2 (lower is better) Translates to: PFVDFRCGWCHCSYDSSETLSTD*FSQRFR Trigger: GCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGT...CTCGCTACTGTCATATGAACAGTGACACCAACCACATCGGAAGTCAACAAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149009.8 |
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| 3UTR-3UTR CCA 90 bp | ACTCCAACGATGGAAGTCATTTTCATGGGTGTGCCATGTGCACTCTGTTCGTCTGAGATGGCTTGCAGTTaGGTTCTTTCTCCGATTGTT | + |
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Preference number: 2 (lower is better) Translates to: TPTMEVIFMGVPCALCSSEMACS*VLSPIV Trigger: AACAATCGGAGAAAGAACCCAACTGCAAGCCATCTC...AGACGAACAGAGTGCACATGGCACACCCATGAAAATGACTTCCATCGTTGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCTCACGTTACCTGCCTGCTTCTACAGGAGGCAAAGTTGGTCTTTCTTTAGAGAGATGGCTTGCAGTTaGGTTCTTTCTCCGATTGTT | + |
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Preference number: 2 (lower is better) Translates to: LLTLPACFYRRQSWSFFREMACS*VLSPIV Trigger: AACAATCGGAGAAAGAACCCAACTGCAAGCCATCTC...TCTAAAGAAAGACCAACTTTGCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| 3UTR-3UTR GCA 90 bp | ACTGGGATATTGGAAAACATAAATATAAACAGAGCGATTAGCCCTCTCCAACTGCCCAGCGAGATGGCTTaGAGTTGGGTTCTTTCTCCG | + |
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Preference number: 2 (lower is better) Translates to: TGILENININRAISPLQLPSEMA*SWVLSP Trigger: CGGAGAAAGAACCCAACTGCAAGCCATCTCGCTGGG...CAGTTGGAGAGGGCTAATCGCTCTGTTTATATTTATGTTTTCCAATATCCCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| 3UTR-3UTR GCA 90 bp | GACTTCCGATGTGGTTGGTGTCACTGTTCATATGACAGTAGCGAGTTTACTTCAAGAAACAGGCTCCTCTaGAAAGGCAGTACTTTGACC | + |
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Preference number: 2 (lower is better) Translates to: DFRCGWCHCSYDSSEFTSRNRLL*KGSTLT Trigger: GGTCAAAGTACTGCCTTTGCAGAGGAGCCTGTTTCT...TGAAGTAAACTCGCTACTGTCATATGAACAGTGACACCAACCACATCGGAAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| 3UTR-3UTR GCA 90 bp | AAGATAGGACTGCCATGCTTCTGCTCACGTTACCTGCCTGCTTCTACAGGAGGCTGCTTTAGTCTAAAGTaGAGAAACATGATGTCTGTA | + |
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Preference number: 2 (lower is better) Translates to: KIGLPCFCSRYLPASTGGCFSLK*RNMMSV Trigger: TACAGACATCATGTTTCTGCACTTTAGACTAAAGCA...GCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAGAAGCATGGCAGTCCTATCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTTAAAGATAACAGAGAGCTGTAATCAAACAAGTAGAGGAGGAATTTGCTTCCCCAGCGAGATGGCTTaGAGTTGGGTTCTTTCTCCG | + |
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Preference number: 2 (lower is better) Translates to: LLKITESCNQTSRGGICFPSEMA*SWVLSP Trigger: CGGAGAAAGAACCCAACTGCAAGCCATCTCGCTGGG...GAAGCAAATTCCTCCTCTACTTGTTTGATTACAGCTCTCTGTTATCTTTAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCTCACGTTACCTGCCTGCTTCTACAGGAGGCAAAGTTGGTCTTTCTTTAGATTCGCCCCTAGATACTaGATACATTCCTCAGATAAT | + |
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Preference number: 2 (lower is better) Translates to: LLTLPACFYRRQSWSFFRFAPRY*IHSSDN Trigger: ATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAA...TCTAAAGAAAGACCAACTTTGCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| 3UTR-3UTR CCA 90 bp | CCAACCCTTGAAAAACCCTCAAGCCAACCCTTTCCTCTTGAAAAGAAATCTGTGGAGATGGCTTGCAGTTaGGTTCTTTCTCCGATTGTT | + |
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Preference number: 2 (lower is better) Translates to: PTLEKPSSQPFPLEKKSVEMACS*VLSPIV Trigger: AACAATCGGAGAAAGAACCCAACTGCAAGCCATCTC...CACAGATTTCTTTTCAAGAGGAAAGGGTTGGCTTGAGGGTTTTTCAAGGGTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| 3UTR CAA 90 bp | TTTCAAGGCCAACCCTTGAAAAACCCTCAAGCCAACCCTTTCCTCTaGAAAAGAAATCTGTGGATTGGAAATGTTAGAGGCTCTCCTACT | + |
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Preference number: 2 (lower is better) Translates to: FQGQPLKNPQANPFL*KRNLWIGNVRGSPT Trigger: AGTAGGAGAGCCTCTAACATTTCCAATCCACAGATTTCTTTTCAAGAGGAAAGGGTTGGCTTGAGGGTTTTTCAAGGGTTGGCCTTGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| 3UTR-3UTR TCA 90 bp | CTCTTAAAGATAACAGAGAGCTGTAATCAAACAAGTAGAGGAGGAATTTGCTTCTTCAAGGCCAACCCTTaGAAAACCCTCAAGCCAACC | + |
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Preference number: 2 (lower is better) Translates to: LLKITESCNQTSRGGICFFKANP*KTLKPT Trigger: GGTTGGCTTGAGGGTTTTTCAAGGGTTGGCCTTGAA...GAAGCAAATTCCTCCTCTACTTGTTTGATTACAGCTCTCTGTTATCTTTAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| 3UTR-3UTR GCA 90 bp | CATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGATGTGGTTAGAAACAGGCTCCTCTaGAAAGGCAGTACTTTGACC | + |
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Preference number: 2 (lower is better) Translates to: HSSDNLKLSFLLLTSDVVRNRLL*KGSTLT Trigger: GGTCAAAGTACTGCCTTTGCAGAGGAGCCTGTTTCT...AACCACATCGGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATCTGAGGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| 3UTR-3UTR CCA 90 bp | TCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTGAGATGGCTTGCAGTTaGGTTCTTTCTCCGATTGTT | + |
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Preference number: 2 (lower is better) Translates to: SPLDTAYIPQIILSSVSFEMACS*VLSPIV Trigger: AACAATCGGAGAAAGAACCCAACTGCAAGCCATCTC...AAAGGAAACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| 3UTR-3UTR CCA 90 bp | GCTTCTTCAAAGGTTAAATCCAAACGGAGAAAAATCTACCCTAAAACTCATCGTGAGGCTCTCCTACTGTaGAAGGAGTGGAGACTAAGA | + |
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Preference number: 2 (lower is better) Translates to: ASSKVKSKRRKIYPKTHREALLL*KEWRLR Trigger: TCTTAGTCTCCACTCCTTCCACAGTAGGAGAGCCTC...ACGATGAGTTTTAGGGTAGATTTTTCTCCGTTTGGATTTAACCTTTGAAGAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| 3UTR CAA 90 bp | TACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTTGTaGACTTCCGATGTGGTTGGTGTCACTGTTCATATGACAGTAGCG | + |
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Preference number: 2 (lower is better) Translates to: YCIHSSDNLKLSFLL*TSDVVGVTVHMTVA Trigger: CGCTACTGTCATATGAACAGTGACACCAACCACATCGGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| 3UTR-3UTR TCA 90 bp | GGTAGAGAAGGAGACACCTTAGATATAATACAGGTCAACTTTTTGACGTGGGGTGCCCTACATCAGATATaGAGTGGATTATTTTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: GREGDTLDIIQVNFLTWGALHQI*SGLFSE Trigger: CTCTGAAAATAATCCACTTCATATCTGATGTAGGGC...ACCCCACGTCAAAAAGTTGACCTGTATTATATCTAAGGTGTCTCCTTCTCTACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTTAAAGATAACAGAGAGCTGTAATCAAACAAGTAGAGGAGGAATTTGCTTCAGAAACAGGCTCCTCTaGAAAGGCAGTACTTTGACC | + |
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Preference number: 2 (lower is better) Translates to: LLKITESCNQTSRGGICFRNRLL*KGSTLT Trigger: GGTCAAAGTACTGCCTTTGCAGAGGAGCCTGTTTCT...GAAGCAAATTCCTCCTCTACTTGTTTGATTACAGCTCTCTGTTATCTTTAAGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| 3UTR-3UTR GCA 90 bp | GCTTCTTCAAAGGTTAAATCCAAACGGAGAAAAATCTACCCTAAAACTCATCGTAGAAACAGGCTCCTCTaGAAAGGCAGTACTTTGACC | + |
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Preference number: 2 (lower is better) Translates to: ASSKVKSKRRKIYPKTHRRNRLL*KGSTLT Trigger: GGTCAAAGTACTGCCTTTGCAGAGGAGCCTGTTTCT...ACGATGAGTTTTAGGGTAGATTTTTCTCCGTTTGGATTTAACCTTTGAAGAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| 3UTR-3UTR CCA 90 bp | TCATTTTCATGGGTGTGCCATGTGCACTCTGTTCGTCTTACCATAGACTTGTGTTACAGGAGGCAAAGTTaGTCTTTCTTTAGACATCTA | + |
|
Preference number: 2 (lower is better) Translates to: SFSWVCHVHSVRLTIDLCYRRQS*SFFRHL Trigger: TAGATGTCTAAAGAAAGACCAACTTTGCCTCCTGTA...ACACAAGTCTATGGTAAGACGAACAGAGTGCACATGGCACACCCATGAAAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCTCTCCTACTGTGGAAGGAGTGGAGACTAAGATAATTTTGGTTAAGTCAGCTTGCTTTAGTCTAAAGTaGAGAAACATGATGTCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: GSPTVEGVETKIILVKSACFSLK*RNMMSV Trigger: TACAGACATCATGTTTCTGCACTTTAGACTAAAGCA...AGCTGACTTAACCAAAATTATCTTAGTCTCCACTCCTTCCACAGTAGGAGAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| 3UTR-3UTR CCA 90 bp | TACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGAGATGGCTTGCAGTTaGGTTCTTTCTCCGATTGTT | + |
|
Preference number: 2 (lower is better) Translates to: YCIHSSDNLKLSFLLLTSEMACS*VLSPIV Trigger: AACAATCGGAGAAAGAACCCAACTGCAAGCCATCTC...GGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| 3UTR CAA 90 bp | AGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTaGTTGACTTCCGATGTGGTTGGTGTCACTGTTCATATGACAGTA | + |
|
Preference number: 2 (lower is better) Translates to: RYCIHSSDNLKLSFL*LTSDVVGVTVHMTV Trigger: TACTGTCATATGAACAGTGACACCAACCACATCGGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| 3UTR CCA 72 bp | CTCCAACTGAGCTGGCCCAGCGAGATGGCTTGCAGTTaGGTTCTTTCTCCGATTGTTTCAGACCTTAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LQLSWPSEMACS*VLSPIVSDLSG Trigger: CCCACTAAGGTCTGAAACAATCGGAGAAAGAACCCAACTGCAAGCCATCTCGCTGGGCCAGCTCAGTTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149009.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTCACGTTACCTGCCTGCTTCTACAGGAGGCAAAGTTGGTCTTTCTTTAGAGCCCAGCGAGATGGCTaGCAGTTGGGTTCTTTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LLTLPACFYRRQSWSFFRAQRDG*QLGSFS Trigger: GGAGAAAGAACCCAACTGCAAGCCATCTCGCTGGGC...TCTAAAGAAAGACCAACTTTGCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| 3UTR-3UTR CAA 90 bp | TCATTTTCATGGGTGTGCCATGTGCACTCTGTTCGTCTTACCATAGACTTGTGTGCCCAGCGAGATGGCTaGCAGTTGGGTTCTTTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SFSWVCHVHSVRLTIDLCAQRDG*QLGSFS Trigger: GGAGAAAGAACCCAACTGCAAGCCATCTCGCTGGGC...ACACAAGTCTATGGTAAGACGAACAGAGTGCACATGGCACACCCATGAAAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTGCCCAGCGAGATGGCTaGCAGTTGGGTTCTTTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: GRFAPRYCIHSSDNLKLSAQRDG*QLGSFS Trigger: GGAGAAAGAACCCAACTGCAAGCCATCTCGCTGGGC...ACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| 3UTR GCA 72 bp | CAGACCTTAGTGGGGGAAGTGACCTTATCCACAGATTaGTTTTCCCAGAGGTTCCGCTTGCCAGATACATCT | + |
|
Preference number: 3 (lower is better) Translates to: QTLVGEVTLSTD*FSQRFRLPDTS Trigger: AGATGTATCTGGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTCACTTCCCCCACTAAGGTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149009.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTCACGTTACCTGCCTGCTTCTACAGGAGGCAAAGTTGGTCTTTCTTTAGACGAGATGGCTTGCAGTaGGGTTCTTTCTCCGATTGT | + |
|
Preference number: 3 (lower is better) Translates to: LLTLPACFYRRQSWSFFRRDGLQ*GSFSDC Trigger: ACAATCGGAGAAAGAACCCAACTGCAAGCCATCTCG...TCTAAAGAAAGACCAACTTTGCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTGTTCATATGACAGTAGCGCCCAGCGAGATGGCTaGCAGTTGGGTTCTTTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: FPFVDFRCGWCHCSYDSSAQRDG*QLGSFS Trigger: GGAGAAAGAACCCAACTGCAAGCCATCTCGCTGGGC...GCTACTGTCATATGAACAGTGACACCAACCACATCGGAAGTCAACAAAAGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGATAGGACTGCCATGCTTCTGCTCACGTTACCTGCCTGCTTCTACAGGAGGCTGCAAAGGCAGTACTTaGACCATGAACATCTCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: KIGLPCFCSRYLPASTGGCKGST*TMNISS Trigger: ACTAGAGATGTTCATGGTCAAAGTACTGCCTTTGCA...GCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAGAAGCATGGCAGTCCTATCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCCATGCTTCTGCTCACGTTACCTGCCTGCTTCTACAGGAGGCAAAGTTGGTCTGCAAAGGCAGTACTTaGACCATGAACATCTCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: CHASAHVTCLLLQEAKLVCKGST*TMNISS Trigger: ACTAGAGATGTTCATGGTCAAAGTACTGCCTTTGCA...GACCAACTTTGCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAGAAGCATGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| 3UTR GCA 72 bp | GATAGGACTGCCATGCTTCTGCTCACGTTACCTGCCTaGTTCTACAGGAGGCAAAGTTGGTCTTTCTTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: DRTAMLLLTLPA*FYRRQSWSFFR Trigger: TCTAAAGAAAGACCAACTTTGCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAGAAGCATGGCAGTCCTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| 3UTR GCA 72 bp | GAGTGTGAGTACATAAAGATAGGACTGCCATGCTTCTaGTCACGTTACCTGCCTGCTTCTACAGGAGGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: ECEYIKIGLPCF*SRYLPASTGGK Trigger: TTTGCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAGAAGCATGGCAGTCCTATCTTTATGTACTCACACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| 3UTR GCA 72 bp | AGACTTGTGTCTACTCTGTCGGGGGTAGATGACTTGTaGAGTCTTAGTGGCTTTTCTTCCTTTGGCCCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: RLVSTLSGVDDL*SLSGFSSFGPS Trigger: ACTTGGGCCAAAGGAAGAAAAGCCACTAAGACTGCACAAGTCATCTACCCCCGACAGAGTAGACACAAGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| 3UTR-3UTR CAA 90 bp | TCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTGCCCAGCGAGATGGCTaGCAGTTGGGTTCTTTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SPLDTAYIPQIILSSVSFAQRDG*QLGSFS Trigger: GGAGAAAGAACCCAACTGCAAGCCATCTCGCTGGGC...AAAGGAAACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| 3UTR-3UTR CAA 90 bp | GATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTTCCCAGAGGTTCCGCTaGCCAGATACATCTCCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: DNLKLSFLLLTSDVVGVTSQRFR*PDTSPG Trigger: GCCAGGAGATGTATCTGGCAAGCGGAACCTCTGGGA...AGTGACACCAACCACATCGGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149009.8 |
||
| 3UTR-3UTR CAA 90 bp | GACTTCCGATGTGGTTGGTGTCACTGTTCATATGACAGTAGCGAGTTTACTTCACGAGATGGCTTGCAGTaGGGTTCTTTCTCCGATTGT | + |
|
Preference number: 3 (lower is better) Translates to: DFRCGWCHCSYDSSEFTSRDGLQ*GSFSDC Trigger: ACAATCGGAGAAAGAACCCAACTGCAAGCCATCTCG...TGAAGTAAACTCGCTACTGTCATATGAACAGTGACACCAACCACATCGGAAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTGCCTGCTTCTACAGGAGGCAAAGTTGGTCTTTCTTTAGACATCTACATGAACGAGATGGCTTGCAGTaGGGTTCTTTCTCCGATTGT | + |
|
Preference number: 3 (lower is better) Translates to: PACFYRRQSWSFFRHLHERDGLQ*GSFSDC Trigger: ACAATCGGAGAAAGAACCCAACTGCAAGCCATCTCG...TTCATGTAGATGTCTAAAGAAAGACCAACTTTGCCTCCTGTAGAAGCAGGCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| 3UTR-3UTR CAA 90 bp | TCATTTTCATGGGTGTGCCATGTGCACTCTGTTCGTCTTACCATAGACTTGTGTCGAGATGGCTTGCAGTaGGGTTCTTTCTCCGATTGT | + |
|
Preference number: 3 (lower is better) Translates to: SFSWVCHVHSVRLTIDLCRDGLQ*GSFSDC Trigger: ACAATCGGAGAAAGAACCCAACTGCAAGCCATCTCG...ACACAAGTCTATGGTAAGACGAACAGAGTGCACATGGCACACCCATGAAAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTCCAACGATGGAAGTCATTTTCATGGGTGTGCCATGTGCACTCTGTTCGTCTCTCAGTTTCCTTTTGTaGACTTCCGATGTGGTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: TPTMEVIFMGVPCALCSSLSFLL*TSDVVG Trigger: ACCAACCACATCGGAAGTCAACAAAAGGAAACTGAG...AGACGAACAGAGTGCACATGGCACACCCATGAAAATGACTTCCATCGTTGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| 3UTR-3UTR CAA 90 bp | TCATTTTCATGGGTGTGCCATGTGCACTCTGTTCGTCTTACCATAGACTTGTGTTCGGGGGTAGATGACTaGTGCAGTCTTAGTGGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: SFSWVCHVHSVRLTIDLCSGVDD*CSLSGF Trigger: AAAGCCACTAAGACTGCACAAGTCATCTACCCCCGA...ACACAAGTCTATGGTAAGACGAACAGAGTGCACATGGCACACCCATGAAAATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTCGAGATGGCTTGCAGTaGGGTTCTTTCTCCGATTGT | + |
|
Preference number: 3 (lower is better) Translates to: VVSPLDTAYIPQIILSSVRDGLQ*GSFSDC Trigger: ACAATCGGAGAAAGAACCCAACTGCAAGCCATCTCG...AACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| 3UTR-3UTR CAA 90 bp | TACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGCCCAGCGAGATGGCTaGCAGTTGGGTTCTTTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: YCIHSSDNLKLSFLLLTSAQRDG*QLGSFS Trigger: GGAGAAAGAACCCAACTGCAAGCCATCTCGCTGGGC...GGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| 3UTR-3UTR CAA 90 bp | CGGGGTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCTGCAAAGGCAGTACTTaGACCATGAACATCTCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: RGRFAPRYCIHSSDNLKLCKGST*TMNISS Trigger: ACTAGAGATGTTCATGGTCAAAGTACTGCCTTTGCA...GAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGACCCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTGACCTTATCCACAGATaGCTTTTCCCAGAGGTTCCG | + |
|
Preference number: 3 (lower is better) Translates to: VVSPLDTAYIPQIILSSVDLIHR*LFPEVP Trigger: CGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTC...AACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149009.8 |
||
| 3UTR GCA 72 bp | AAACAAAGCCTACGGGGTCGTTTCGCCCCTAGATACTaGATACATTCCTCAGATAATCTTAAGCTCAGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: KQSLRGRFAPRY*IHSSDNLKLSF Trigger: GAAACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGACCCCGTAGGCTTTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| 3UTR GCA 72 bp | ATTGTACTCCAACGATGGAAGTCATTTTCATGGGTGTaGCATGTGCACTCTGTTCGTCTTACCATAGACTTG | + |
|
Preference number: 3 (lower is better) Translates to: IVLQRWKSFSWV*HVHSVRLTIDL Trigger: CAAGTCTATGGTAAGACGAACAGAGTGCACATGGCACACCCATGAAAATGACTTCCATCGTTGGAGTACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTGCAAAGGCAGTACTTaGACCATGAACATCTCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: VVSPLDTAYIPQIILSSVCKGST*TMNISS Trigger: ACTAGAGATGTTCATGGTCAAAGTACTGCCTTTGCA...AACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTAGAGAAGGAGACACCTTAGATATAATACAGGTCAACTTTTTGACGTGGGGTTGCAAAGGCAGTACTTaGACCATGAACATCTCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: GREGDTLDIIQVNFLTWGCKGST*TMNISS Trigger: ACTAGAGATGTTCATGGTCAAAGTACTGCCTTTGCA...ACCCCACGTCAAAAAGTTGACCTGTATTATATCTAAGGTGTCTCCTTCTCTACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| 3UTR-3UTR CAA 90 bp | GATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTCTCAGTTTCCTTTTGTaGACTTCCGATGTGGTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: DNLKLSFLLLTSDVVGVTLSFLL*TSDVVG Trigger: ACCAACCACATCGGAAGTCAACAAAAGGAAACTGAG...AGTGACACCAACCACATCGGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| 3UTR-3UTR CAA 90 bp | GATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTTGCAAAGGCAGTACTTaGACCATGAACATCTCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: DNLKLSFLLLTSDVVGVTCKGST*TMNISS Trigger: ACTAGAGATGTTCATGGTCAAAGTACTGCCTTTGCA...AGTGACACCAACCACATCGGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCTTAAAGATAACAGAGAGCTGTAATCAAACAAGTAGAGGAGGAATTTGCTTCGCCAACCCTTTCCTCTaGAAAAGAAATCTGTGGATT | + |
|
Preference number: 3 (lower is better) Translates to: LLKITESCNQTSRGGICFANPFL*KRNLWI Trigger: AATCCACAGATTTCTTTTCAAGAGGAAAGGGTTGGC...GAAGCAAATTCCTCCTCTACTTGTTTGATTACAGCTCTCTGTTATCTTTAAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTTCTTCAAAGGTTAAATCCAAACGGAGAAAAATCTACCCTAAAACTCATCGTAAAGAAATCTGTGGATaGGAAATGTTAGAGGCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: ASSKVKSKRRKIYPKTHRKEICG*EMLEAL Trigger: GAGAGCCTCTAACATTTCCAATCCACAGATTTCTTT...ACGATGAGTTTTAGGGTAGATTTTTCTCCGTTTGGATTTAACCTTTGAAGAAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CCA 90 bp | CGGGGTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCGGCGGCGCCGTTCCCTaGCAGCCTCTTCTTCGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RGRFAPRYCIHSSDNLKLGGAVP*QPLLRH Trigger: ATGACGAAGAAGAGGCTGCCAGGGAACGGCGCCGCC...GAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGACCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR TCA 90 bp | AAGATAGGACTGCCATGCTTCTGCTCACGTTACCTGCCTGCTTCTACAGGAGGCTCTTCGGCTTGGGCCTaGGAGACTGCCATCTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: KIGLPCFCSRYLPASTGGSSAWA*ETAICY Trigger: ATAACAGATGGCAGTCTCTCAGGCCCAAGCCGAAGA...GCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAGAAGCATGGCAGTCCTATCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | CTACGGGGTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGGCTCCTCCAGCCTCTTaGCGGCTTCCACTTGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LRGRFAPRYCIHSSDNLKAPPAS*RLPLVG Trigger: CCCCACAAGTGGAAGCCGGCAAGAGGCTGGAGGAGC...CTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGACCCCGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR TCA 90 bp | CCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTGTTCATATGACAGTAGCGAGACTGGCCCGGCCTCCTaGACGGCTGAAAGCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PFVDFRCGWCHCSYDSSETGPAS*TAESIL Trigger: GAGAATGCTTTCAGCCGTTCAGGAGGCCGGGCCAGT...CTCGCTACTGTCATATGAACAGTGACACCAACCACATCGGAAGTCAACAAAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTCACGTTACCTGCCTGCTTCTACAGGAGGCAAAGTTGGTCTTTCTTTAGATCTTCCTCTTGCTTCTaGCGCAGCCTTTCCTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LLTLPACFYRRQSWSFFRSSSCF*RSLSCR Trigger: CCGGCAGGAAAGGCTGCGGCAGAAGCAAGAGGAAGA...TCTAAAGAAAGACCAACTTTGCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | AAGATAGGACTGCCATGCTTCTGCTCACGTTACCTGCCTGCTTCTACAGGAGGCAAGGATTCTTCCTCTTaGTTCTGCCGCAGCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KIGLPCFCSRYLPASTGGKDSSS*FCRSLS Trigger: GGAAAGGCTGCGGCAGAAGCAAGAGGAAGAATCCTT...GCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAGAAGCATGGCAGTCCTATCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | GGTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTGCTCCTCCAGCCTCTTaGCGGCTTCCACTTGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GRFAPRYCIHSSDNLKLSAPPAS*RLPLVG Trigger: CCCCACAAGTGGAAGCCGGCAAGAGGCTGGAGGAGC...ACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | AAGATAGGACTGCCATGCTTCTGCTCACGTTACCTGCCTGCTTCTACAGGAGGCCTTCTCAGCAGCTTCTaGCCTTCTCCTTTCGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: KIGLPCFCSRYLPASTGGLLSSF*PSPFDL Trigger: GAGATCGAAAGGAGAAGGGCAGAAGCTGCTGAGAAG...GCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAGAAGCATGGCAGTCCTATCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | AAGATAGGACTGCCATGCTTCTGCTCACGTTACCTGCCTGCTTCTACAGGAGGCATAGGCAATTCTTTCTaGCTCCAGCCGCATCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KIGLPCFCSRYLPASTGGIGNSF*LQPHLL Trigger: GAGGAGATGCGGCTGGAGGCAGAAAGAATTGCCTAT...GCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAGAAGCATGGCAGTCCTATCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079391.10 ENSMUST00000115026.8 ENSMUST00000115027.8 |
||
| CDS-3UTR CCA 90 bp | TGCCATGCTTCTGCTCACGTTACCTGCCTGCTTCTACAGGAGGCAAAGTTGGTCCAGCAGTTTCCTTATTaGGTGTTCCTGAGGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CHASAHVTCLLLQEAKLVQQFPY*VFLRQR Trigger: CCTCTGCCTCAGGAACACCCAATAAGGAAACTGCTG...GACCAACTTTGCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAGAAGCATGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR TCA 90 bp | GACTTCCGATGTGGTTGGTGTCACTGTTCATATGACAGTAGCGAGTTTACTTCAACTGGCCCGGCCTCCTaGACGGCTGAAAGCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: DFRCGWCHCSYDSSEFTSTGPAS*TAESIL Trigger: GAGAATGCTTTCAGCCGTTCAGGAGGCCGGGCCAGT...TGAAGTAAACTCGCTACTGTCATATGAACAGTGACACCAACCACATCGGAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR TCA 90 bp | GGTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTACTGGCCCGGCCTCCTaGACGGCTGAAAGCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GRFAPRYCIHSSDNLKLSTGPAS*TAESIL Trigger: GAGAATGCTTTCAGCCGTTCAGGAGGCCGGGCCAGT...ACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | CCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTGTTCATATGACAGTAGCGAGTCTTCCTCTTGCTTCTaGCGCAGCCTTTCCTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PFVDFRCGWCHCSYDSSESSSCF*RSLSCR Trigger: CCGGCAGGAAAGGCTGCGGCAGAAGCAAGAGGAAGA...CTCGCTACTGTCATATGAACAGTGACACCAACCACATCGGAAGTCAACAAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | AAGATAGGACTGCCATGCTTCTGCTCACGTTACCTGCCTGCTTCTACAGGAGGCACCTTATCCACAGATTaGTTTTCCCAGAGGTTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: KIGLPCFCSRYLPASTGGTLSTD*FSQRFR Trigger: GCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGT...GCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAGAAGCATGGCAGTCCTATCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 |
||
| CDS-3UTR CCA 90 bp | ACTCCAACGATGGAAGTCATTTTCATGGGTGTGCCATGTGCACTCTGTTCGTCTCAATTTGAGAGAGTGTaGCCAGGCAGCGCCTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TPTMEVIFMGVPCALCSSQFERV*PGSAFP Trigger: AGGGAAGGCGCTGCCTGGCCACACTCTCTCAAATTG...AGACGAACAGAGTGCACATGGCACACCCATGAAAATGACTTCCATCGTTGGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115021.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CCA 90 bp | ACTCCAACGATGGAAGTCATTTTCATGGGTGTGCCATGTGCACTCTGTTCGTCTTTCCCTCGATTGCATTaGTGTACTGCTCCAGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: TPTMEVIFMGVPCALCSSFPRLH*CTAPAG Trigger: GCCGGCTGGAGCAGTACACCAATGCAATCGAGGGAA...AGACGAACAGAGTGCACATGGCACACCCATGAAAATGACTTCCATCGTTGGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTCACGTTACCTGCCTGCTTCTACAGGAGGCAAAGTTGGTCTTTCTTTAGATTCCCTCGATTGCATTaGTGTACTGCTCCAGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLTLPACFYRRQSWSFFRFPRLH*CTAPAG Trigger: GCCGGCTGGAGCAGTACACCAATGCAATCGAGGGAA...TCTAAAGAAAGACCAACTTTGCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| 3UTR CAA 72 bp | CCAGCGAGATGGCTTGCAGTTGGGTTCTTTCTCCGATaGTTTCAGACCTTAGTGGGGGAAGTGACCTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: PARWLAVGFFLR*FQTLVGEVTLS Trigger: GGATAAGGTCACTTCCCCCACTAAGGTCTGAAACAATCGGAGAAAGAACCCAACTGCAAGCCATCTCGCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | TTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCCTTGCTCCTCCAGCCTCTTaGCGGCTTCCACTTGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FAPRYCIHSSDNLKLSFLAPPAS*RLPLVG Trigger: CCCCACAAGTGGAAGCCGGCAAGAGGCTGGAGGAGC...AAGGAAACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | TCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTGCTCCTCCAGCCTCTTaGCGGCTTCCACTTGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPLDTAYIPQIILSSVSFAPPAS*RLPLVG Trigger: CCCCACAAGTGGAAGCCGGCAAGAGGCTGGAGGAGC...AAAGGAAACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | ACTCCAACGATGGAAGTCATTTTCATGGGTGTGCCATGTGCACTCTGTTCGTCTCGATCAGCCTCCTCCTaGTTTCTTCTCTGCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TPTMEVIFMGVPCALCSSRSASS*FLLCSS Trigger: AGAGGAGCAGAGAAGAAAGCAGGAGGAGGCTGATCG...AGACGAACAGAGTGCACATGGCACACCCATGAAAATGACTTCCATCGTTGGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CCA 90 bp | CCTTTCCTCTTGAAAAGAAATCTGTGGATTGGAAATGTTAGAGGCTCTCCTACTGGCGGCGCCGTTCCCTaGCAGCCTCTTCTTCGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PFLLKRNLWIGNVRGSPTGGAVP*QPLLRH Trigger: ATGACGAAGAAGAGGCTGCCAGGGAACGGCGCCGCC...AGTAGGAGAGCCTCTAACATTTCCAATCCACAGATTTCTTTTCAAGAGGAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CCA 90 bp | CCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTGTTCATATGACAGTAGCGAGACACTGTTCTGGACATaGGCCTCCACCTGGTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PFVDFRCGWCHCSYDSSETLFWT*ASTWSV Trigger: GACAGACCAGGTGGAGGCCCATGTCCAGAACAGTGT...CTCGCTACTGTCATATGAACAGTGACACCAACCACATCGGAAGTCAACAAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CCA 90 bp | ACTCCAACGATGGAAGTCATTTTCATGGGTGTGCCATGTGCACTCTGTTCGTCTGCCGGCTGTCAATCTTaGAGACTACTGCTGCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TPTMEVIFMGVPCALCSSAGCQS*RLLLLG Trigger: ACCAAGCAGCAGTAGTCTCCAAGATTGACAGCCGGC...AGACGAACAGAGTGCACATGGCACACCCATGAAAATGACTTCCATCGTTGGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CCA 90 bp | CGGGGTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCGCCGGCTGTCAATCTTaGAGACTACTGCTGCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RGRFAPRYCIHSSDNLKLAGCQS*RLLLLG Trigger: ACCAAGCAGCAGTAGTCTCCAAGATTGACAGCCGGC...GAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGACCCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CCA 90 bp | CTACGGGGTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGTTCCCTCGATTGCATTaGTGTACTGCTCCAGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LRGRFAPRYCIHSSDNLKFPRLH*CTAPAG Trigger: GCCGGCTGGAGCAGTACACCAATGCAATCGAGGGAA...CTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGACCCCGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| 3UTR CAA 72 bp | TCAGACCTTAGTGGGGGAAGTGACCTTATCCACAGATaGCTTTTCCCAGAGGTTCCGCTTGCCAGATACATC | + |
|
Preference number: 4 (lower is better) Translates to: SDLSGGSDLIHR*LFPEVPLARYI Trigger: GATGTATCTGGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTCACTTCCCCCACTAAGGTCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149009.8 |
||
| CDS-3UTR TCA 90 bp | CTACGGGGTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGTCTTCGGCTTGGGCCTaGGAGACTGCCATCTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LRGRFAPRYCIHSSDNLKSSAWA*ETAICY Trigger: ATAACAGATGGCAGTCTCTCAGGCCCAAGCCGAAGA...CTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGACCCCGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR TCA 90 bp | CGGGGTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCCCTTTCTCTTCTTCCTaGTTTTCGCCAAGGCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RGRFAPRYCIHSSDNLKLPFSSS*FSPRLP Trigger: AGGGAGCCTTGGCGAAAATCAGGAAGAAGAGAAAGG...GAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGACCCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031775.13 |
||
| CDS-3UTR TCA 90 bp | TTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCCTTACTGGCCCGGCCTCCTaGACGGCTGAAAGCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FAPRYCIHSSDNLKLSFLTGPAS*TAESIL Trigger: GAGAATGCTTTCAGCCGTTCAGGAGGCCGGGCCAGT...AAGGAAACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | CTGCCTGCTTCTACAGGAGGCAAAGTTGGTCTTTCTTTAGACATCTACATGAATTCTTCCTCTTGCTTCTaGCGCAGCCTTTCCTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LPASTGGKVGLSLDIYMNSSSCF*RSLSCR Trigger: CCGGCAGGAAAGGCTGCGGCAGAAGCAAGAGGAAGA...ATTCATGTAGATGTCTAAAGAAAGACCAACTTTGCCTCCTGTAGAAGCAGGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | CGGGGTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAAGGATTCTTCCTCTTaGTTCTGCCGCAGCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RGRFAPRYCIHSSDNLKLKDSSS*FCRSLS Trigger: GGAAAGGCTGCGGCAGAAGCAAGAGGAAGAATCCTT...GAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGACCCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | ACTCCAACGATGGAAGTCATTTTCATGGGTGTGCCATGTGCACTCTGTTCGTCTTTGGGCCTGAGAGACTaGCATCTGTTATGGTCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TPTMEVIFMGVPCALCSSLGLRD*HLLWSD Trigger: ATCCGACCATAACAGATGGCAGTCTCTCAGGCCCAA...AGACGAACAGAGTGCACATGGCACACCCATGAAAATGACTTCCATCGTTGGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CCA 90 bp | TCATTTTCATGGGTGTGCCATGTGCACTCTGTTCGTCTTACCATAGACTTGTGTACACTGTTCTGGACATaGGCCTCCACCTGGTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SFSWVCHVHSVRLTIDLCTLFWT*ASTWSV Trigger: GACAGACCAGGTGGAGGCCCATGTCCAGAACAGTGT...ACACAAGTCTATGGTAAGACGAACAGAGTGCACATGGCACACCCATGAAAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CCA 90 bp | GACTTCCGATGTGGTTGGTGTCACTGTTCATATGACAGTAGCGAGTTTACTTCAACACTGTTCTGGACATaGGCCTCCACCTGGTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: DFRCGWCHCSYDSSEFTSTLFWT*ASTWSV Trigger: GACAGACCAGGTGGAGGCCCATGTCCAGAACAGTGT...TGAAGTAAACTCGCTACTGTCATATGAACAGTGACACCAACCACATCGGAAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CCA 90 bp | CCTGCCTGCTTCTACAGGAGGCAAAGTTGGTCTTTCTTTAGACATCTACATGAAACACTGTTCTGGACATaGGCCTCCACCTGGTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PACFYRRQSWSFFRHLHETLFWT*ASTWSV Trigger: GACAGACCAGGTGGAGGCCCATGTCCAGAACAGTGT...TTCATGTAGATGTCTAAAGAAAGACCAACTTTGCCTCCTGTAGAAGCAGGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CCA 90 bp | CTACGGGGTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGGCCGGCTGTCAATCTTaGAGACTACTGCTGCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LRGRFAPRYCIHSSDNLKAGCQS*RLLLLG Trigger: ACCAAGCAGCAGTAGTCTCCAAGATTGACAGCCGGC...CTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGACCCCGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CCA 90 bp | CGGGGTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCGAGATCCGATGCTGCTaGCTTCATAGGTTTCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RGRFAPRYCIHSSDNLKLEIRCC*LHRFRS Trigger: GCTTCGAAACCTATGAAGCCAGCAGCATCGGATCTC...GAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGACCCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CCA 90 bp | CGGGGTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCTCAAGTCAGAAGGCTTaGGAGCAGGTGACTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RGRFAPRYCIHSSDNLKLSSQKA*EQVTCC Trigger: GCAACAAGTCACCTGCTCCCAAGCCTTCTGACTTGA...GAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGACCCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 |
||
| 3UTR CAA 72 bp | CATAGACTTGTGTCTACTCTGTCGGGGGTAGATGACTaGTGCAGTCTTAGTGGCTTTTCTTCCTTTGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HRLVSTLSGVDD*CSLSGFSSFGP Trigger: TGGGCCAAAGGAAGAAAAGCCACTAAGACTGCACAAGTCATCTACCCCCGACAGAGTAGACACAAGTCTATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR TCA 90 bp | AAGATAGGACTGCCATGCTTCTGCTCACGTTACCTGCCTGCTTCTACAGGAGGCCCTGTTGCTTCTGTTTaGGTTTTTCAAACTCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: KIGLPCFCSRYLPASTGGPVASV*VFQTLR Trigger: ACGAAGAGTTTGAAAAACTCAAACAGAAGCAACAGG...GCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAGAAGCATGGCAGTCCTATCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR TCA 90 bp | TTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCCTTCGGCTTCTTGTCCTCTaGCAGGCCATCCTCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FAPRYCIHSSDNLKLSFLRLLVL*QAILWH Trigger: ATGCCAGAGGATGGCCTGTCAGAGGACAAGAAGCCG...AAGGAAACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR TCA 90 bp | GATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTCGGCTTCTTGTCCTCTaGCAGGCCATCCTCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: DNLKLSFLLLTSDVVGVTRLLVL*QAILWH Trigger: ATGCCAGAGGATGGCCTGTCAGAGGACAAGAAGCCG...AGTGACACCAACCACATCGGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | GATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTTCTTCCTCTTGCTTCTaGCGCAGCCTTTCCTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: DNLKLSFLLLTSDVVGVTSSSCF*RSLSCR Trigger: CCGGCAGGAAAGGCTGCGGCAGAAGCAAGAGGAAGA...AGTGACACCAACCACATCGGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | TCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTTCTTCCTCTTGCTTCTaGCGCAGCCTTTCCTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SPLDTAYIPQIILSSVSFSSSCF*RSLSCR Trigger: CCGGCAGGAAAGGCTGCGGCAGAAGCAAGAGGAAGA...AAAGGAAACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | TACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGCTCCTCCAGCCTCTTaGCGGCTTCCACTTGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: YCIHSSDNLKLSFLLLTSAPPAS*RLPLVG Trigger: CCCCACAAGTGGAAGCCGGCAAGAGGCTGGAGGAGC...GGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | GACTTCCGATGTGGTTGGTGTCACTGTTCATATGACAGTAGCGAGTTTACTTCACGATCAGCCTCCTCCTaGTTTCTTCTCTGCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: DFRCGWCHCSYDSSEFTSRSASS*FLLCSS Trigger: AGAGGAGCAGAGAAGAAAGCAGGAGGAGGCTGATCG...TGAAGTAAACTCGCTACTGTCATATGAACAGTGACACCAACCACATCGGAAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | CTACGGGGTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGATAGGCAATTCTTTCTaGCTCCAGCCGCATCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LRGRFAPRYCIHSSDNLKIGNSF*LQPHLL Trigger: GAGGAGATGCGGCTGGAGGCAGAAAGAATTGCCTAT...CTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGACCCCGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079391.10 ENSMUST00000115026.8 ENSMUST00000115027.8 |
||
| CDS-3UTR GCA 90 bp | TCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTTCAGCCACTCTTCTCTaGTCCTCCTGGATCCTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SPLDTAYIPQIILSSVSFSATLL*SSWILA Trigger: GGCGAGGATCCAGGAGGAGCAGAGAAGAGTGGCTGA...AAAGGAAACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115027.8 |
||
| CDS-3UTR CCA 90 bp | GTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTACACTGTTCTGGACATaGGCCTCCACCTGGTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VVSPLDTAYIPQIILSSVTLFWT*ASTWSV Trigger: GACAGACCAGGTGGAGGCCCATGTCCAGAACAGTGT...AACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTCCTCTGCAAAGGCAGTACTTTGACCATGAACATCTCTAGTTGTGGTTATTCCTCTGGCATCTTCTaGCGCTTCTCAGCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RLLCKGSTLTMNISSCGYSSGIF*RFSAAS Trigger: AGAAGCTGCTGAGAAGCGCCAGAAGATGCCAGAGGA...ATAACCACAACTAGAGATGTTCATGGTCAAAGTACTGCCTTTGCAGAGGAGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CCA 90 bp | CCAACCCTTGAAAAACCCTCAAGCCAACCCTTTCCTCTTGAAAAGAAATCTGTGGCCGGCTGTCAATCTTaGAGACTACTGCTGCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PTLEKPSSQPFPLEKKSVAGCQS*RLLLLG Trigger: ACCAAGCAGCAGTAGTCTCCAAGATTGACAGCCGGC...CACAGATTTCTTTTCAAGAGGAAAGGGTTGGCTTGAGGGTTTTTCAAGGGTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CCA 90 bp | CCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTGTTCATATGACAGTAGCGAGTCAAGTCAGAAGGCTTaGGAGCAGGTGACTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PFVDFRCGWCHCSYDSSESSQKA*EQVTCC Trigger: GCAACAAGTCACCTGCTCCCAAGCCTTCTGACTTGA...CTCGCTACTGTCATATGAACAGTGACACCAACCACATCGGAAGTCAACAAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 |
||
| CDS-3UTR CCA 90 bp | TTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCCTTCTTCTCTGCTCCTCCTaGATCCTCGCCTGCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FAPRYCIHSSDNLKLSFLLLCSS*ILACSA Trigger: TGCAGAGCAGGCGAGGATCCAGGAGGAGCAGAGAAG...AAGGAAACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115027.8 |
||
| CDS-3UTR CCA 90 bp | TTTCCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTGTTCATATGACAGTAGCTCTCCCCCTTGTCCTTaGCTTCTCGCTTCTCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: FPFVDFRCGWCHCSYDSSSPPCP*LLASHS Trigger: GGAGTGAGAAGCGAGAAGCCAAGGACAAGGGGGAGA...GCTACTGTCATATGAACAGTGACACCAACCACATCGGAAGTCAACAAAAGGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115027.8 |
||
| CDS-3UTR TCA 90 bp | GGTAGAGAAGGAGACACCTTAGATATAATACAGGTCAACTTTTTGACGTGGGGTTCTTCGGCTTGGGCCTaGGAGACTGCCATCTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: GREGDTLDIIQVNFLTWGSSAWA*ETAICY Trigger: ATAACAGATGGCAGTCTCTCAGGCCCAAGCCGAAGA...ACCCCACGTCAAAAAGTTGACCTGTATTATATCTAAGGTGTCTCCTTCTCTACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR TCA 90 bp | CATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGATGTGGTTCGGCTTCTTGTCCTCTaGCAGGCCATCCTCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: HSSDNLKLSFLLLTSDVVRLLVL*QAILWH Trigger: ATGCCAGAGGATGGCCTGTCAGAGGACAAGAAGCCG...AACCACATCGGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATCTGAGGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR TCA 90 bp | CCAACCCTTGAAAAACCCTCAAGCCAACCCTTTCCTCTTGAAAAGAAATCTGTGCCCTCTTTTGTCTCCTaGGTTCTCTGCGACGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PTLEKPSSQPFPLEKKSVPSFVS*VLCDVQ Trigger: TTGAACGTCGCAGAGAACTCAGGAGACAAAAGAGGG...CACAGATTTCTTTTCAAGAGGAAAGGGTTGGCTTGAGGGTTTTTCAAGGGTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000079391.10 ENSMUST00000115026.8 ENSMUST00000115027.8 |
||
| CDS-3UTR TCA 90 bp | ACTCCAACGATGGAAGTCATTTTCATGGGTGTGCCATGTGCACTCTGTTCGTCTTTCTCATCTTTGATCTaGTTTTCGCCAAGGCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TPTMEVIFMGVPCALCSSFSSLI*FSPRLP Trigger: AGGGAGCCTTGGCGAAAATCAGATCAAAGATGAGAA...AGACGAACAGAGTGCACATGGCACACCCATGAAAATGACTTCCATCGTTGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000149009.8 |
||
| CDS-3UTR TCA 90 bp | TCATTTTCATGGGTGTGCCATGTGCACTCTGTTCGTCTTACCATAGACTTGTGTACCATCTTCTCTACCTaGTTTTCGCCAAGGCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SFSWVCHVHSVRLTIDLCTIFST*FSPRLP Trigger: AGGGAGCCTTGGCGAAAATCAGGTAGAGAAGATGGT...ACACAAGTCTATGGTAAGACGAACAGAGTGCACATGGCACACCCATGAAAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115027.8 |
||
| CDS-3UTR GCA 90 bp | GACTTCCGATGTGGTTGGTGTCACTGTTCATATGACAGTAGCGAGTTTACTTCAAAGGATTCTTCCTCTTaGTTCTGCCGCAGCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DFRCGWCHCSYDSSEFTSKDSSS*FCRSLS Trigger: GGAAAGGCTGCGGCAGAAGCAAGAGGAAGAATCCTT...TGAAGTAAACTCGCTACTGTCATATGAACAGTGACACCAACCACATCGGAAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | GGTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTAAGGATTCTTCCTCTTaGTTCTGCCGCAGCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GRFAPRYCIHSSDNLKLSKDSSS*FCRSLS Trigger: GGAAAGGCTGCGGCAGAAGCAAGAGGAAGAATCCTT...ACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | CCTGCCTGCTTCTACAGGAGGCAAAGTTGGTCTTTCTTTAGACATCTACATGAAAAGGATTCTTCCTCTTaGTTCTGCCGCAGCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PACFYRRQSWSFFRHLHEKDSSS*FCRSLS Trigger: GGAAAGGCTGCGGCAGAAGCAAGAGGAAGAATCCTT...TTCATGTAGATGTCTAAAGAAAGACCAACTTTGCCTCCTGTAGAAGCAGGCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTCCTCTGCAAAGGCAGTACTTTGACCATGAACATCTCTAGTTGTGGTTATTTGGGCCTGAGAGACTaGCATCTGTTATGGTCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RLLCKGSTLTMNISSCGYLGLRD*HLLWSD Trigger: ATCCGACCATAACAGATGGCAGTCTCTCAGGCCCAA...ATAACCACAACTAGAGATGTTCATGGTCAAAGTACTGCCTTTGCAGAGGAGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | GGTAGAGAAGGAGACACCTTAGATATAATACAGGTCAACTTTTTGACGTGGGGTCGATCAGCCTCCTCCTaGTTTCTTCTCTGCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GREGDTLDIIQVNFLTWGRSASS*FLLCSS Trigger: AGAGGAGCAGAGAAGAAAGCAGGAGGAGGCTGATCG...ACCCCACGTCAAAAAGTTGACCTGTATTATATCTAAGGTGTCTCCTTCTCTACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CCA 90 bp | GATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTCAATTTGAGAGAGTGTaGCCAGGCAGCGCCTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: DNLKLSFLLLTSDVVGVTQFERV*PGSAFP Trigger: AGGGAAGGCGCTGCCTGGCCACACTCTCTCAAATTG...AGTGACACCAACCACATCGGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031775.13 ENSMUST00000115021.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CCA 90 bp | CCTTTCCTCTTGAAAAGAAATCTGTGGATTGGAAATGTTAGAGGCTCTCCTACTACACTGTTCTGGACATaGGCCTCCACCTGGTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PFLLKRNLWIGNVRGSPTTLFWT*ASTWSV Trigger: GACAGACCAGGTGGAGGCCCATGTCCAGAACAGTGT...AGTAGGAGAGCCTCTAACATTTCCAATCCACAGATTTCTTTTCAAGAGGAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CCA 90 bp | GTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCCTCTGGCATCTTCTaGCGCTTCTCAGCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VVSPLDTAYIPQIILSSVSSGIF*RFSAAS Trigger: AGAAGCTGCTGAGAAGCGCCAGAAGATGCCAGAGGA...AACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CCA 90 bp | TTTCCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTGTTCATATGACAGTAGCTCCTCTGGCATCTTCTaGCGCTTCTCAGCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FPFVDFRCGWCHCSYDSSSSGIF*RFSAAS Trigger: AGAAGCTGCTGAGAAGCGCCAGAAGATGCCAGAGGA...GCTACTGTCATATGAACAGTGACACCAACCACATCGGAAGTCAACAAAAGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CCA 90 bp | GGTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTGAGATCCGATGCTGCTaGCTTCATAGGTTTCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRFAPRYCIHSSDNLKLSEIRCC*LHRFRS Trigger: GCTTCGAAACCTATGAAGCCAGCAGCATCGGATCTC...ACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CCA 90 bp | GACTTCCGATGTGGTTGGTGTCACTGTTCATATGACAGTAGCGAGTTTACTTCAGAGATCCGATGCTGCTaGCTTCATAGGTTTCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: DFRCGWCHCSYDSSEFTSEIRCC*LHRFRS Trigger: GCTTCGAAACCTATGAAGCCAGCAGCATCGGATCTC...TGAAGTAAACTCGCTACTGTCATATGAACAGTGACACCAACCACATCGGAAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CCA 90 bp | CCAACCCTTGAAAAACCCTCAAGCCAACCCTTTCCTCTTGAAAAGAAATCTGTGGAGATCCGATGCTGCTaGCTTCATAGGTTTCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PTLEKPSSQPFPLEKKSVEIRCC*LHRFRS Trigger: GCTTCGAAACCTATGAAGCCAGCAGCATCGGATCTC...CACAGATTTCTTTTCAAGAGGAAAGGGTTGGCTTGAGGGTTTTTCAAGGGTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CCA 90 bp | CCTGCCTGCTTCTACAGGAGGCAAAGTTGGTCTTTCTTTAGACATCTACATGAACAGCAGTTTCCTTATTaGGTGTTCCTGAGGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PACFYRRQSWSFFRHLHEQQFPY*VFLRQR Trigger: CCTCTGCCTCAGGAACACCCAATAAGGAAACTGCTG...TTCATGTAGATGTCTAAAGAAAGACCAACTTTGCCTCCTGTAGAAGCAGGCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTCCTCTGCAAAGGCAGTACTTTGACCATGAACATCTCTAGTTGTGGTTATTCAAGTCAGAAGGCTTaGGAGCAGGTGACTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RLLCKGSTLTMNISSCGYSSQKA*EQVTCC Trigger: GCAACAAGTCACCTGCTCCCAAGCCTTCTGACTTGA...ATAACCACAACTAGAGATGTTCATGGTCAAAGTACTGCCTTTGCAGAGGAGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 |
||
| CDS-3UTR TCA 90 bp | TCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTTCTTCGGCTTGGGCCTaGGAGACTGCCATCTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SPLDTAYIPQIILSSVSFSSAWA*ETAICY Trigger: ATAACAGATGGCAGTCTCTCAGGCCCAAGCCGAAGA...AAAGGAAACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR TCA 90 bp | TACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCCGGCTTCTTGTCCTCTaGCAGGCCATCCTCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: YCIHSSDNLKLSFLLLTSRLLVL*QAILWH Trigger: ATGCCAGAGGATGGCCTGTCAGAGGACAAGAAGCCG...GGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR TCA 90 bp | GCTTCTTCAAAGGTTAAATCCAAACGGAGAAAAATCTACCCTAAAACTCATCGTCGGCTTCTTGTCCTCTaGCAGGCCATCCTCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ASSKVKSKRRKIYPKTHRRLLVL*QAILWH Trigger: ATGCCAGAGGATGGCCTGTCAGAGGACAAGAAGCCG...ACGATGAGTTTTAGGGTAGATTTTTCTCCGTTTGGATTTAACCTTTGAAGAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR TCA 90 bp | ACAATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTCCTCTCTTAAAGCCCTCTTTTGTCTCCTaGGTTCTCTGCGACGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: TMADSQNMLVSLQFPLLKPSFVS*VLCDVQ Trigger: TTGAACGTCGCAGAGAACTCAGGAGACAAAAGAGGG...CTTTAAGAGAGGAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079391.10 ENSMUST00000115026.8 ENSMUST00000115027.8 |
||
| CDS-3UTR TCA 90 bp | CCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTGTTCATATGACAGTAGCGAGTTCTCATCTTTGATCTaGTTTTCGCCAAGGCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PFVDFRCGWCHCSYDSSEFSSLI*FSPRLP Trigger: AGGGAGCCTTGGCGAAAATCAGATCAAAGATGAGAA...CTCGCTACTGTCATATGAACAGTGACACCAACCACATCGGAAGTCAACAAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000149009.8 |
||
| CDS-3UTR TCA 90 bp | CCAACCCTTGAAAAACCCTCAAGCCAACCCTTTCCTCTTGAAAAGAAATCTGTGCCAGAGACGAAAGAGTaGAGAAGAGAAGCCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PTLEKPSSQPFPLEKKSVPETKE*RREARE Trigger: TTCTCTGGCTTCTCTTCTTCACTCTTTCGTCTCTGG...CACAGATTTCTTTTCAAGAGGAAAGGGTTGGCTTGAGGGTTTTTCAAGGGTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | GGTAGAGAAGGAGACACCTTAGATATAATACAGGTCAACTTTTTGACGTGGGGTTTGGGCCTGAGAGACTaGCATCTGTTATGGTCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GREGDTLDIIQVNFLTWGLGLRD*HLLWSD Trigger: ATCCGACCATAACAGATGGCAGTCTCTCAGGCCCAA...ACCCCACGTCAAAAAGTTGACCTGTATTATATCTAAGGTGTCTCCTTCTCTACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | TCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTCGATCAGCCTCCTCCTaGTTTCTTCTCTGCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPLDTAYIPQIILSSVSFRSASS*FLLCSS Trigger: AGAGGAGCAGAGAAGAAAGCAGGAGGAGGCTGATCG...AAAGGAAACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | CTGCCTGCTTCTACAGGAGGCAAAGTTGGTCTTTCTTTAGACATCTACATGAATCTTCTCAGCAGCTTCTaGCCTTCTCCTTTCGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: LPASTGGKVGLSLDIYMNLLSSF*PSPFDL Trigger: GAGATCGAAAGGAGAAGGGCAGAAGCTGCTGAGAAG...ATTCATGTAGATGTCTAAAGAAAGACCAACTTTGCCTCCTGTAGAAGCAGGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | GGTAGAGAAGGAGACACCTTAGATATAATACAGGTCAACTTTTTGACGTGGGGTCTTCTCAGCAGCTTCTaGCCTTCTCCTTTCGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: GREGDTLDIIQVNFLTWGLLSSF*PSPFDL Trigger: GAGATCGAAAGGAGAAGGGCAGAAGCTGCTGAGAAG...ACCCCACGTCAAAAAGTTGACCTGTATTATATCTAAGGTGTCTCCTTCTCTACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTCACGTTACCTGCCTGCTTCTACAGGAGGCAAAGTTGGTCTTTCTTTAGAAATCTTGGAGACTACTaGTGCTTGGTGAGTAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: LLTLPACFYRRQSWSFFRNLGDY*CLVSRS Trigger: AGATCTACTCACCAAGCAGCAGTAGTCTCCAAGATT...TCTAAAGAAAGACCAACTTTGCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTCCTCTGCAAAGGCAGTACTTTGACCATGAACATCTCTAGTTGTGGTTATACCTTATCCACAGATTaGTTTTCCCAGAGGTTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RLLCKGSTLTMNISSCGYTLSTD*FSQRFR Trigger: GCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGT...ATAACCACAACTAGAGATGTTCATGGTCAAAGTACTGCCTTTGCAGAGGAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 |
||
| CDS-3UTR GCA 90 bp | GACTTCCGATGTGGTTGGTGTCACTGTTCATATGACAGTAGCGAGTTTACTTCATATTTTGGACTCTTCTaGGCTGACCTGCCCGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: DFRCGWCHCSYDSSEFTSYFGLF*ADLPVF Trigger: GAAAACGGGCAGGTCAGCGCAGAAGAGTCCAAAATA...TGAAGTAAACTCGCTACTGTCATATGAACAGTGACACCAACCACATCGGAAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115027.8 |
||
| CDS-3UTR GCA 90 bp | CCAACCCTTGAAAAACCCTCAAGCCAACCCTTTCCTCTTGAAAAGAAATCTGTGCTTTGCTCCTCCAGCTaGTGTTTCTGTCTTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PTLEKPSSQPFPLEKKSVLCSSS*CFCLCS Trigger: AGAGCAAAGACAGAAACAGCAGCTGGAGGAGCAAAG...CACAGATTTCTTTTCAAGAGGAAAGGGTTGGCTTGAGGGTTTTTCAAGGGTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115027.8 |
||
| CDS-3UTR CCA 90 bp | GATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTTCCTCTGGCATCTTCTaGCGCTTCTCAGCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DNLKLSFLLLTSDVVGVTSSGIF*RFSAAS Trigger: AGAAGCTGCTGAGAAGCGCCAGAAGATGCCAGAGGA...AGTGACACCAACCACATCGGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CCA 90 bp | GATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTGCCGGCTGTCAATCTTaGAGACTACTGCTGCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: DNLKLSFLLLTSDVVGVTAGCQS*RLLLLG Trigger: ACCAAGCAGCAGTAGTCTCCAAGATTGACAGCCGGC...AGTGACACCAACCACATCGGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CCA 90 bp | ACAATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTCCTCTCTTAAAGTCAAGTCAGAAGGCTTaGGAGCAGGTGACTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TMADSQNMLVSLQFPLLKSSQKA*EQVTCC Trigger: GCAACAAGTCACCTGCTCCCAAGCCTTCTGACTTGA...CTTTAAGAGAGGAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 |
||
| CDS-3UTR CCA 90 bp | GACTTCCGATGTGGTTGGTGTCACTGTTCATATGACAGTAGCGAGTTTACTTCATTCTTCCTGCGTCTTTaGGACAGCTGTCTGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: DFRCGWCHCSYDSSEFTSFFLRL*DSCLKS Trigger: AGACTTCAGACAGCTGTCCCAAAGACGCAGGAAGAA...TGAAGTAAACTCGCTACTGTCATATGAACAGTGACACCAACCACATCGGAAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115027.8 |
||
| CDS-3UTR TCA 90 bp | CATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGATGTGGTTTCTTCGGCTTGGGCCTaGGAGACTGCCATCTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: HSSDNLKLSFLLLTSDVVSSAWA*ETAICY Trigger: ATAACAGATGGCAGTCTCTCAGGCCCAAGCCGAAGA...AACCACATCGGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATCTGAGGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR TCA 90 bp | CTACGGGGTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGTATCCAAGAAGCTCTTaGCTTCTTCTTTGGGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LRGRFAPRYCIHSSDNLKYPRSS*LLLWAL Trigger: AAGAGCCCAAAGAAGAAGTCAAGAGCTTCTTGGATA...CTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGACCCCGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR TCA 90 bp | ACTCCAACGATGGAAGTCATTTTCATGGGTGTGCCATGTGCACTCTGTTCGTCTCCTGTTGCTTCTGTTTaGGTTTTTCAAACTCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: TPTMEVIFMGVPCALCSSPVASV*VFQTLR Trigger: ACGAAGAGTTTGAAAAACTCAAACAGAAGCAACAGG...AGACGAACAGAGTGCACATGGCACACCCATGAAAATGACTTCCATCGTTGGAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR TCA 90 bp | GATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTCCCTCTTTTGTCTCCTaGGTTCTCTGCGACGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: DNLKLSFLLLTSDVVGVTPSFVS*VLCDVQ Trigger: TTGAACGTCGCAGAGAACTCAGGAGACAAAAGAGGG...AGTGACACCAACCACATCGGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079391.10 ENSMUST00000115026.8 ENSMUST00000115027.8 |
||
| CDS-3UTR TCA 90 bp | GGTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCTCATCTTTGATCTaGTTTTCGCCAAGGCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GRFAPRYCIHSSDNLKLSFSSLI*FSPRLP Trigger: AGGGAGCCTTGGCGAAAATCAGATCAAAGATGAGAA...ACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | TTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCCTTAAGGATTCTTCCTCTTaGTTCTGCCGCAGCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FAPRYCIHSSDNLKLSFLKDSSS*FCRSLS Trigger: GGAAAGGCTGCGGCAGAAGCAAGAGGAAGAATCCTT...AAGGAAACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | GTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTACCTTATCCACAGATTaGTTTTCCCAGAGGTTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: VVSPLDTAYIPQIILSSVTLSTD*FSQRFR Trigger: GCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGT...AACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 |
||
| CDS-3UTR GCA 90 bp | CCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTGTTCATATGACAGTAGCGAGGCTAGCTTTCTGTCCTaGTCAGCTTTGATTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PFVDFRCGWCHCSYDSSEASFLS*SALILS Trigger: AGAAAGAATCAAAGCTGAGCAGGACAGAAAGCTAGC...CTCGCTACTGTCATATGAACAGTGACACCAACCACATCGGAAGTCAACAAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115027.8 |
||
| CDS-3UTR GCA 90 bp | GATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTCTTGGCCTTTTTCTGTaGCTCAGCCACTCTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DNLKLSFLLLTSDVVGVTLGLFL*LSHSSL Trigger: CAGAGAAGAGTGGCTGAGGCACAGAAAAAGGCCAAG...AGTGACACCAACCACATCGGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115027.8 |
||
| CDS-3UTR GCA 90 bp | TTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCCTTCCTTTCTCTTCTTCCTaGGTCTTTGGGACAGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FAPRYCIHSSDNLKLSFLPFSSS*VFGTAV Trigger: GACAGCTGTCCCAAAGACGCAGGAAGAAGAGAAAGG...AAGGAAACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115027.8 |
||
| CDS-3UTR CCA 90 bp | GCTTCTTCAAAGGTTAAATCCAAACGGAGAAAAATCTACCCTAAAACTCATCGTCAATTTGAGAGAGTGTaGCCAGGCAGCGCCTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ASSKVKSKRRKIYPKTHRQFERV*PGSAFP Trigger: AGGGAAGGCGCTGCCTGGCCACACTCTCTCAAATTG...ACGATGAGTTTTAGGGTAGATTTTTCTCCGTTTGGATTTAACCTTTGAAGAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115021.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CCA 90 bp | CATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGATGTGGTTTCCTCTGGCATCTTCTaGCGCTTCTCAGCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HSSDNLKLSFLLLTSDVVSSGIF*RFSAAS Trigger: AGAAGCTGCTGAGAAGCGCCAGAAGATGCCAGAGGA...AACCACATCGGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATCTGAGGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CCA 90 bp | GCTTCTTCAAAGGTTAAATCCAAACGGAGAAAAATCTACCCTAAAACTCATCGTTTCCCTCGATTGCATTaGTGTACTGCTCCAGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: ASSKVKSKRRKIYPKTHRFPRLH*CTAPAG Trigger: GCCGGCTGGAGCAGTACACCAATGCAATCGAGGGAA...ACGATGAGTTTTAGGGTAGATTTTTCTCCGTTTGGATTTAACCTTTGAAGAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CCA 90 bp | GATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTGAGATCCGATGCTGCTaGCTTCATAGGTTTCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: DNLKLSFLLLTSDVVGVTEIRCC*LHRFRS Trigger: GCTTCGAAACCTATGAAGCCAGCAGCATCGGATCTC...AGTGACACCAACCACATCGGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CCA 90 bp | TCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTCAGCAGTTTCCTTATTaGGTGTTCCTGAGGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPLDTAYIPQIILSSVSFQQFPY*VFLRQR Trigger: CCTCTGCCTCAGGAACACCCAATAAGGAAACTGCTG...AAAGGAAACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CCA 90 bp | TCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTTCAAGTCAGAAGGCTTaGGAGCAGGTGACTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SPLDTAYIPQIILSSVSFSSQKA*EQVTCC Trigger: GCAACAAGTCACCTGCTCCCAAGCCTTCTGACTTGA...AAAGGAAACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 |
||
| CDS-3UTR CCA 90 bp | ACAATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTCCTCTCTTAAAGAGCACAGCCTCCTCTTaGATTTCTGGTGTTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TMADSQNMLVSLQFPLLKSTASS*ISGVFS Trigger: GGAGAAAACACCAGAAATCCAAGAGGAGGCTGTGCT...CTTTAAGAGAGGAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115027.8 |
||
| 3UTR CAA 72 bp | TCCCTCAGCATCTGCCTAAGATCGAACTTTGATCCATaGTACTCCAACGATGGAAGTCATTTTCATGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLSICLRSNFDP*YSNDGSHFHGC Trigger: ACACCCATGAAAATGACTTCCATCGTTGGAGTACAATGGATCAAAGTTCGATCTTAGGCAGATGCTGAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR TCA 90 bp | TCATTTTCATGGGTGTGCCATGTGCACTCTGTTCGTCTTACCATAGACTTGTGTTATCCAAGAAGCTCTTaGCTTCTTCTTTGGGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SFSWVCHVHSVRLTIDLCYPRSS*LLLWAL Trigger: AAGAGCCCAAAGAAGAAGTCAAGAGCTTCTTGGATA...ACACAAGTCTATGGTAAGACGAACAGAGTGCACATGGCACACCCATGAAAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | CATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGATGTGGTTCTTCTCAGCAGCTTCTaGCCTTCTCCTTTCGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: HSSDNLKLSFLLLTSDVVLLSSF*PSPFDL Trigger: GAGATCGAAAGGAGAAGGGCAGAAGCTGCTGAGAAG...AACCACATCGGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATCTGAGGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | GACTTCCGATGTGGTTGGTGTCACTGTTCATATGACAGTAGCGAGTTTACTTCAAATCTTGGAGACTACTaGTGCTTGGTGAGTAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: DFRCGWCHCSYDSSEFTSNLGDY*CLVSRS Trigger: AGATCTACTCACCAAGCAGCAGTAGTCTCCAAGATT...TGAAGTAAACTCGCTACTGTCATATGAACAGTGACACCAACCACATCGGAAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | GGCTCTCCTACTGTGGAAGGAGTGGAGACTAAGATAATTTTGGTTAAGTCAGCTAATCTTGGAGACTACTaGTGCTTGGTGAGTAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: GSPTVEGVETKIILVKSANLGDY*CLVSRS Trigger: AGATCTACTCACCAAGCAGCAGTAGTCTCCAAGATT...AGCTGACTTAACCAAAATTATCTTAGTCTCCACTCCTTCCACAGTAGGAGAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | CCTGCCTGCTTCTACAGGAGGCAAAGTTGGTCTTTCTTTAGACATCTACATGAAAATCTTGGAGACTACTaGTGCTTGGTGAGTAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: PACFYRRQSWSFFRHLHENLGDY*CLVSRS Trigger: AGATCTACTCACCAAGCAGCAGTAGTCTCCAAGATT...TTCATGTAGATGTCTAAAGAAAGACCAACTTTGCCTCCTGTAGAAGCAGGCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | CATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGATGTGGTTATAGGCAATTCTTTCTaGCTCCAGCCGCATCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HSSDNLKLSFLLLTSDVVIGNSF*LQPHLL Trigger: GAGGAGATGCGGCTGGAGGCAGAAAGAATTGCCTAT...AACCACATCGGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATCTGAGGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079391.10 ENSMUST00000115026.8 ENSMUST00000115027.8 |
||
| CDS-3UTR CCA 90 bp | CATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGATGTGGTTGAGATCCGATGCTGCTaGCTTCATAGGTTTCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: HSSDNLKLSFLLLTSDVVEIRCC*LHRFRS Trigger: GCTTCGAAACCTATGAAGCCAGCAGCATCGGATCTC...AACCACATCGGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATCTGAGGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CCA 90 bp | CTCTTAAAGATAACAGAGAGCTGTAATCAAACAAGTAGAGGAGGAATTTGCTTCAAGCCAGAGAAGGCTTaGGAGCAGGTGACTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLKITESCNQTSRGGICFKPEKA*EQVTCC Trigger: GCAACAAGTCACCTGCTCCCAAGCCTTCTCTGGCTT...GAAGCAAATTCCTCCTCTACTTGTTTGATTACAGCTCTCTGTTATCTTTAAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149009.8 |
||
| 3UTR CAA 72 bp | CAACCCTTGAAAAACCCTCAAGCCAACCCTTTCCTCTaGAAAAGAAATCTGTGGATTGGAAATGTTAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QPLKNPQANPFL*KRNLWIGNVRG Trigger: GCCTCTAACATTTCCAATCCACAGATTTCTTTTCAAGAGGAAAGGGTTGGCTTGAGGGTTTTTCAAGGGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR TCA 90 bp | TTTCCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTGTTCATATGACAGTAGCTATCCAAGAAGCTCTTaGCTTCTTCTTTGGGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FPFVDFRCGWCHCSYDSSYPRSS*LLLWAL Trigger: AAGAGCCCAAAGAAGAAGTCAAGAGCTTCTTGGATA...GCTACTGTCATATGAACAGTGACACCAACCACATCGGAAGTCAACAAAAGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | TACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCTTGGGCCTGAGAGACTaGCATCTGTTATGGTCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: YCIHSSDNLKLSFLLLTSLGLRD*HLLWSD Trigger: ATCCGACCATAACAGATGGCAGTCTCTCAGGCCCAA...GGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | CTCTTAAAGATAACAGAGAGCTGTAATCAAACAAGTAGAGGAGGAATTTGCTTCTTGGGCCTGAGAGACTaGCATCTGTTATGGTCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLKITESCNQTSRGGICFLGLRD*HLLWSD Trigger: ATCCGACCATAACAGATGGCAGTCTCTCAGGCCCAA...GAAGCAAATTCCTCCTCTACTTGTTTGATTACAGCTCTCTGTTATCTTTAAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | CTCTTAAAGATAACAGAGAGCTGTAATCAAACAAGTAGAGGAGGAATTTGCTTCCTTCTCAGCAGCTTCTaGCCTTCTCCTTTCGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLKITESCNQTSRGGICFLLSSF*PSPFDL Trigger: GAGATCGAAAGGAGAAGGGCAGAAGCTGCTGAGAAG...GAAGCAAATTCCTCCTCTACTTGTTTGATTACAGCTCTCTGTTATCTTTAAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | GCTTCTTCAAAGGTTAAATCCAAACGGAGAAAAATCTACCCTAAAACTCATCGTCTTCTCAGCAGCTTCTaGCCTTCTCCTTTCGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: ASSKVKSKRRKIYPKTHRLLSSF*PSPFDL Trigger: GAGATCGAAAGGAGAAGGGCAGAAGCTGCTGAGAAG...ACGATGAGTTTTAGGGTAGATTTTTCTCCGTTTGGATTTAACCTTTGAAGAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | CTGCCTGCTTCTACAGGAGGCAAAGTTGGTCTTTCTTTAGACATCTACATGAATAATCTTGGAGACTACTaGTGCTTGGTGAGTAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: LPASTGGKVGLSLDIYMNNLGDY*CLVSRS Trigger: AGATCTACTCACCAAGCAGCAGTAGTCTCCAAGATT...ATTCATGTAGATGTCTAAAGAAAGACCAACTTTGCCTCCTGTAGAAGCAGGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | ACTGGGATATTGGAAAACATAAATATAAACAGAGCGATTAGCCCTCTCCAACTGACCTTATCCACAGATTaGTTTTCCCAGAGGTTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: TGILENININRAISPLQLTLSTD*FSQRFR Trigger: GCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGT...CAGTTGGAGAGGGCTAATCGCTCTGTTTATATTTATGTTTTCCAATATCCCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 |
||
| CDS-3UTR CCA 90 bp | TACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCCAGCAGTTTCCTTATTaGGTGTTCCTGAGGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: YCIHSSDNLKLSFLLLTSQQFPY*VFLRQR Trigger: CCTCTGCCTCAGGAACACCCAATAAGGAAACTGCTG...GGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CCA 90 bp | GCTTCTTCAAAGGTTAAATCCAAACGGAGAAAAATCTACCCTAAAACTCATCGTCAGCAGTTTCCTTATTaGGTGTTCCTGAGGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASSKVKSKRRKIYPKTHRQQFPY*VFLRQR Trigger: CCTCTGCCTCAGGAACACCCAATAAGGAAACTGCTG...ACGATGAGTTTTAGGGTAGATTTTTCTCCGTTTGGATTTAACCTTTGAAGAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CCA 90 bp | CTCTTAAAGATAACAGAGAGCTGTAATCAAACAAGTAGAGGAGGAATTTGCTTCCAGCAGTTTCCTTATTaGGTGTTCCTGAGGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLKITESCNQTSRGGICFQQFPY*VFLRQR Trigger: CCTCTGCCTCAGGAACACCCAATAAGGAAACTGCTG...GAAGCAAATTCCTCCTCTACTTGTTTGATTACAGCTCTCTGTTATCTTTAAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR TCA 90 bp | GATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTTATCCAAGAAGCTCTTaGCTTCTTCTTTGGGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: DNLKLSFLLLTSDVVGVTYPRSS*LLLWAL Trigger: AAGAGCCCAAAGAAGAAGTCAAGAGCTTCTTGGATA...AGTGACACCAACCACATCGGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR TCA 90 bp | GGTAGAGAAGGAGACACCTTAGATATAATACAGGTCAACTTTTTGACGTGGGGTCCTGTTGCTTCTGTTTaGGTTTTTCAAACTCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: GREGDTLDIIQVNFLTWGPVASV*VFQTLR Trigger: ACGAAGAGTTTGAAAAACTCAAACAGAAGCAACAGG...ACCCCACGTCAAAAAGTTGACCTGTATTATATCTAAGGTGTCTCCTTCTCTACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR TCA 90 bp | GATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTCCTGTTGCTTCTGTTTaGGTTTTTCAAACTCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: DNLKLSFLLLTSDVVGVTPVASV*VFQTLR Trigger: ACGAAGAGTTTGAAAAACTCAAACAGAAGCAACAGG...AGTGACACCAACCACATCGGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | GACTTCCGATGTGGTTGGTGTCACTGTTCATATGACAGTAGCGAGTTTACTTCACTGACACCACTTTTCTaGACAGATTTATTCAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: DFRCGWCHCSYDSSEFTSLTPLF*TDLFKN Trigger: GTTTTTGAATAAATCTGTGCAGAAAAGTGGTGTCAG...TGAAGTAAACTCGCTACTGTCATATGAACAGTGACACCAACCACATCGGAAGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | GGTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTCTGACACCACTTTTCTaGACAGATTTATTCAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GRFAPRYCIHSSDNLKLSLTPLF*TDLFKN Trigger: GTTTTTGAATAAATCTGTGCAGAAAAGTGGTGTCAG...ACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTCCTCTGCAAAGGCAGTACTTTGACCATGAACATCTCTAGTTGTGGTTATCTGACACCACTTTTCTaGACAGATTTATTCAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RLLCKGSTLTMNISSCGYLTPLF*TDLFKN Trigger: GTTTTTGAATAAATCTGTGCAGAAAAGTGGTGTCAG...ATAACCACAACTAGAGATGTTCATGGTCAAAGTACTGCCTTTGCAGAGGAGCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | ACTGGGATATTGGAAAACATAAATATAAACAGAGCGATTAGCCCTCTCCAACTGTGCTGTTTCTGTCTTTaGTCTTCTATCCTTGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TGILENININRAISPLQLCCFCL*SSILAF Trigger: GAAGGCAAGGATAGAAGAGCAAAGACAGAAACAGCA...CAGTTGGAGAGGGCTAATCGCTCTGTTTATATTTATGTTTTCCAATATCCCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115027.8 |
||
| CDS-3UTR TCA 90 bp | CTCTTAAAGATAACAGAGAGCTGTAATCAAACAAGTAGAGGAGGAATTTGCTTCTATCCAAGAAGCTCTTaGCTTCTTCTTTGGGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLKITESCNQTSRGGICFYPRSS*LLLWAL Trigger: AAGAGCCCAAAGAAGAAGTCAAGAGCTTCTTGGATA...GAAGCAAATTCCTCCTCTACTTGTTTGATTACAGCTCTCTGTTATCTTTAAGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR TCA 90 bp | TACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCTATCCAAGAAGCTCTTaGCTTCTTCTTTGGGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YCIHSSDNLKLSFLLLTSYPRSS*LLLWAL Trigger: AAGAGCCCAAAGAAGAAGTCAAGAGCTTCTTGGATA...GGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR TCA 90 bp | CATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGATGTGGTTCCTGTTGCTTCTGTTTaGGTTTTTCAAACTCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: HSSDNLKLSFLLLTSDVVPVASV*VFQTLR Trigger: ACGAAGAGTTTGAAAAACTCAAACAGAAGCAACAGG...AACCACATCGGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATCTGAGGAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR TCA 90 bp | ACTGGGATATTGGAAAACATAAATATAAACAGAGCGATTAGCCCTCTCCAACTGCCTGTTGCTTCTGTTTaGGTTTTTCAAACTCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: TGILENININRAISPLQLPVASV*VFQTLR Trigger: ACGAAGAGTTTGAAAAACTCAAACAGAAGCAACAGG...CAGTTGGAGAGGGCTAATCGCTCTGTTTATATTTATGTTTTCCAATATCCCAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | TTTCCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTGTTCATATGACAGTAGCCTGACACCACTTTTCTaGACAGATTTATTCAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: FPFVDFRCGWCHCSYDSSLTPLF*TDLFKN Trigger: GTTTTTGAATAAATCTGTGCAGAAAAGTGGTGTCAG...GCTACTGTCATATGAACAGTGACACCAACCACATCGGAAGTCAACAAAAGGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | GCTTCTTCAAAGGTTAAATCCAAACGGAGAAAAATCTACCCTAAAACTCATCGTAATCTTGGAGACTACTaGTGCTTGGTGAGTAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: ASSKVKSKRRKIYPKTHRNLGDY*CLVSRS Trigger: AGATCTACTCACCAAGCAGCAGTAGTCTCCAAGATT...ACGATGAGTTTTAGGGTAGATTTTTCTCCGTTTGGATTTAACCTTTGAAGAAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| 3UTR CAA 72 bp | ATACATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTaGTTGACTTCCGATGTGGTTGGTGTCACTGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: IHSSDNLKLSFL*LTSDVVGVTVH Trigger: ATGAACAGTGACACCAACCACATCGGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATCTGAGGAATGTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | GATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTCTGACACCACTTTTCTaGACAGATTTATTCAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: DNLKLSFLLLTSDVVGVTLTPLF*TDLFKN Trigger: GTTTTTGAATAAATCTGTGCAGAAAAGTGGTGTCAG...AGTGACACCAACCACATCGGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR GCA 90 bp | CATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGATGTGGTTCTGACACCACTTTTCTaGACAGATTTATTCAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: HSSDNLKLSFLLLTSDVVLTPLF*TDLFKN Trigger: GTTTTTGAATAAATCTGTGCAGAAAAGTGGTGTCAG...AACCACATCGGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATCTGAGGAATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS GCA 90 bp | TGGGCCTCCACCTGGTCTGTCACCTGTCCCAAGGATTCTTCCTCTTaGTTCTGCCGCAGCCTTTCCTGCCGGGCCCGGCGGCGCCGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: WASTWSVTCPKDSSS*FCRSLSCRARRRRS Trigger: GGAACGGCGCCGCCGGGCCCGGCAGGAAAGGCTGCGGCAGAAGCAAGAGGAAGAATCCTTGGGACAGGTGACAGACCAGGTGGAGGCCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000142512.8 ENSMUST00000149009.8 |
||
| CDS GCA 90 bp | TCCACCTGGTCTGTCACCTGTCCCAAGGATTCTTCCTCTTGCTTCTaGCGCAGCCTTTCCTGCCGGGCCCGGCGGCGCCGTTCCCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: STWSVTCPKDSSSCF*RSLSCRARRRRSLA Trigger: TGCCAGGGAACGGCGCCGCCGGGCCCGGCAGGAAAGGCTGCGGCAGAAGCAAGAGGAAGAATCCTTGGGACAGGTGACAGACCAGGTGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000142512.8 ENSMUST00000149009.8 |
||
| CDS GCA 90 bp | ACCTGTCCCAAGGATTCTTCCTCTTGCTTCTGCCGCAGCCTTTCCTaGCGGGCCCGGCGGCGCCGTTCCCTGGCAGCCTCTTCTTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TCPKDSSSCFCRSLS*RARRRRSLAASSSS Trigger: TGACGAAGAAGAGGCTGCCAGGGAACGGCGCCGCCGGGCCCGGCAGGAAAGGCTGCGGCAGAAGCAAGAGGAAGAATCCTTGGGACAGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000142512.8 ENSMUST00000149009.8 |
||
| CDS TCA 90 bp | AGGCAGAGGGGGCTGAGAACACGCTCCCCTTCTCCCACATGCTCTTaGTATTGCGGACGCCCTCGGCAGGAACAGGGAGATCCGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RQRGLRTRSPSPTCS*YCGRPRQEQGDPML Trigger: CAGCATCGGATCTCCCTGTTCCTGCCGAGGGCGTCCGCAATATCAAGAGCATGTGGGAGAAGGGGAGCGTGTTCTCAGCCCCCTCTGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS TCA 90 bp | CTAGCCAGGCGCTCCAGTAAGGCAGCCTCCTCGTCACCTTCTACCTaGGTGTTTGAGGAGGCTGGCTTAGACTCTTCATCGGGGACACTG | + |
|
Preference number: 5 (lower is better) Translates to: LARRSSKAASSSPST*VFEEAGLDSSSGTL Trigger: CAGTGTCCCCGATGAAGAGTCTAAGCCAGCCTCCTCAAACACTCAGGTAGAAGGTGACGAGGAGGCTGCCTTACTGGAGCGCCTGGCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000142512.8 ENSMUST00000149009.8 |
||
| CDS CCA 90 bp | GAGGAGGCTGGCTTAGACTCTTCATCGGGGACACTGTTCTGGACATaGGCCTCCACCTGGTCTGTCACCTGTCCCAAGGATTCTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: EEAGLDSSSGTLFWT*ASTWSVTCPKDSSS Trigger: AGAGGAAGAATCCTTGGGACAGGTGACAGACCAGGTGGAGGCCCATGTCCAGAACAGTGTCCCCGATGAAGAGTCTAAGCCAGCCTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000142512.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | TGCCATGCTTCTGCTCACGTTACCTGCCTGCTTCTACAGGAGGCAAAGTTGGTCCTTGCCGGCTTCCACTaGTGGGGCACCTTCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CHASAHVTCLLLQEAKLVLAGFH*WGTFSF Trigger: GAAGCTGAAGGTGCCCCACAAGTGGAAGCCGGCAAG...GACCAACTTTGCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAGAAGCATGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS CCA 90 bp | GTGTTTGAGGAGGCTGGCTTAGACTCTTCATCGGGGACACTGTTCTaGACATGGGCCTCCACCTGGTCTGTCACCTGTCCCAAGGATTCT | + |
|
Preference number: 5 (lower is better) Translates to: VFEEAGLDSSSGTLF*TWASTWSVTCPKDS Trigger: AGAATCCTTGGGACAGGTGACAGACCAGGTGGAGGCCCATGTCCAGAACAGTGTCCCCGATGAAGAGTCTAAGCCAGCCTCCTCAAACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000142512.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | CGGGGTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCGCACCTTCAGCTTCCTaGTCCCCACTGGCCCGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RGRFAPRYCIHSSDNLKLAPSAS*SPLARP Trigger: AGGCCGGGCCAGTGGGGACAAGGAAGCTGAAGGTGC...GAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGACCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | AAGATAGGACTGCCATGCTTCTGCTCACGTTACCTGCCTGCTTCTACAGGAGGCTCCCAGAGGTTCCGCTaGCCAGATACATCTCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: KIGLPCFCSRYLPASTGGSQRFR*PDTSPG Trigger: GCCAGGAGATGTATCTGGCAAGCGGAACCTCTGGGA...GCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAGAAGCATGGCAGTCCTATCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 |
||
| CDS TCA 90 bp | TTGTGGGGCACCTTCAGCTTCCTTGTCCCCACTGGCCCGGCCTCCTaGACGGCTGAAAGCATTCTCGGTTTGTTTAAGTTTGTGGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: LWGTFSFLVPTGPAS*TAESILGLFKFVGH Trigger: ATGACCCACAAACTTAAACAAACCGAGAATGCTTTCAGCCGTTCAGGAGGCCGGGCCAGTGGGGACAAGGAAGCTGAAGGTGCCCCACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS TCA 90 bp | AGACGAGCCTTTAGGAGTGAAGCACTTGAACGGCTTCTTGTCCTCTaGCAGGCCATCCTCTGGCATCTTCTGGCGCTTCTCAGCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RRAFRSEALERLLVL*QAILWHLLALLSSF Trigger: GAAGCTGCTGAGAAGCGCCAGAAGATGCCAGAGGATGGCCTGTCAGAGGACAAGAAGCCGTTCAAGTGCTTCACTCCTAAAGGCTCGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000142716.3 ENSMUST00000149009.8 |
||
| CDS CCA 90 bp | TTGAACGGCTTCTTGTCCTCTGACAGGCCATCCTCTGGCATCTTCTaGCGCTTCTCAGCAGCTTCTGCCCTTCTCCTTTCGATCTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LNGFLSSDRPSSGIF*RFSAASALLLSISS Trigger: GGAAGAGATCGAAAGGAGAAGGGCAGAAGCTGCTGAGAAGCGCCAGAAGATGCCAGAGGATGGCCTGTCAGAGGACAAGAAGCCGTTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000142716.3 ENSMUST00000149009.8 |
||
| CDS CCA 90 bp | CTCCTTTCCTGTCTGCTTTCTCGGCTCCTTTCTCCCCCTTGTCCTTaGCTTCTCGCTTCTCACTCCTTTGCTCCTCCAGCTGCTGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLSCLLSRLLSPPCP*LLASHSFAPPAAVS Trigger: AGAAACAGCAGCTGGAGGAGCAAAGGAGTGAGAAGCGAGAAGCCAAGGACAAGGGGGAGAAAGGAGCCGAGAAAGCAGACAGGAAAGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115027.8 ENSMUST00000136907.8 ENSMUST00000142716.3 |
||
| CDS-3UTR CAA 90 bp | CTGCTCACGTTACCTGCCTGCTTCTACAGGAGGCAAAGTTGGTCTTTCTTTAGAAGCTCCTCCAGCCTCTaGCCGGCTTCCACTTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LLTLPACFYRRQSWSFFRSSSSL*PASTCG Trigger: CCCACAAGTGGAAGCCGGCAAGAGGCTGGAGGAGCT...TCTAAAGAAAGACCAACTTTGCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| CDS GCA 90 bp | CTTGATATTGCGGACGCCCTCGGCAGGAACAGGGAGATCCGATGCTaGTGGCTTCATAGGTTTCGAAGCCTTTGTTCCCTCGATTGCATT | + |
|
Preference number: 5 (lower is better) Translates to: LDIADALGRNREIRC*WLHRFRSLCSLDCI Trigger: AATGCAATCGAGGGAACAAAGGCTTCGAAACCTATGAAGCCAGCAGCATCGGATCTCCCTGTTCCTGCCGAGGGCGTCCGCAATATCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | AAGATAGGACTGCCATGCTTCTGCTCACGTTACCTGCCTGCTTCTACAGGAGGCCAAGGATTCTTCCTCTaGCTTCTGCCGCAGCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KIGLPCFCSRYLPASTGGQGFFL*LLPQPF Trigger: GAAAGGCTGCGGCAGAAGCAAGAGGAAGAATCCTTG...GCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAGAAGCATGGCAGTCCTATCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | TCATTTTCATGGGTGTGCCATGTGCACTCTGTTCGTCTTACCATAGACTTGTGTGCACCTTCAGCTTCCTaGTCCCCACTGGCCCGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SFSWVCHVHSVRLTIDLCAPSAS*SPLARP Trigger: AGGCCGGGCCAGTGGGGACAAGGAAGCTGAAGGTGC...ACACAAGTCTATGGTAAGACGAACAGAGTGCACATGGCACACCCATGAAAATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | CTGCTCACGTTACCTGCCTGCTTCTACAGGAGGCAAAGTTGGTCTTTCTTTAGACTTGCCGGCTTCCACTaGTGGGGCACCTTCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLTLPACFYRRQSWSFFRLAGFH*WGTFSF Trigger: GAAGCTGAAGGTGCCCCACAAGTGGAAGCCGGCAAG...TCTAAAGAAAGACCAACTTTGCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | TGCCATGCTTCTGCTCACGTTACCTGCCTGCTTCTACAGGAGGCAAAGTTGGTCCCAGCAGTTTCCTTATaGGGTGTTCCTGAGGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: CHASAHVTCLLLQEAKLVPAVSL*GVPEAE Trigger: CTCTGCCTCAGGAACACCCAATAAGGAAACTGCTGG...GACCAACTTTGCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAGAAGCATGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | AAGATAGGACTGCCATGCTTCTGCTCACGTTACCTGCCTGCTTCTACAGGAGGCCATCTCCTCCCTCTTTaGTCTCCTGAGTTCTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: KIGLPCFCSRYLPASTGGHLLPL*SPEFSA Trigger: CGCAGAGAACTCAGGAGACAAAAGAGGGAGGAGATG...GCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAGAAGCATGGCAGTCCTATCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079391.10 ENSMUST00000115026.8 ENSMUST00000115027.8 |
||
| CDS-3UTR CAA 90 bp | AAGATAGGACTGCCATGCTTCTGCTCACGTTACCTGCCTGCTTCTACAGGAGGCTCTCTGATAGGCAATTaGAGAGAGTGTGGCCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: KIGLPCFCSRYLPASTGGSLIGN*RECGQA Trigger: TGCCTGGCCACACTCTCTCAAATTGCCTATCAGAGA...GCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAGAAGCATGGCAGTCCTATCTT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115021.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | GTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTGCACCTTCAGCTTCCTaGTCCCCACTGGCCCGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: VVSPLDTAYIPQIILSSVAPSAS*SPLARP Trigger: AGGCCGGGCCAGTGGGGACAAGGAAGCTGAAGGTGC...AACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | GGTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTAGCTCCTCCAGCCTCTaGCCGGCTTCCACTTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GRFAPRYCIHSSDNLKLSSSSSL*PASTCG Trigger: CCCACAAGTGGAAGCCGGCAAGAGGCTGGAGGAGCT...ACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| CDS-3UTR CAA 90 bp | AGGCTCCTCTGCAAAGGCAGTACTTTGACCATGAACATCTCTAGTTGTGGTTATAGCTCCTCCAGCCTCTaGCCGGCTTCCACTTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RLLCKGSTLTMNISSCGYSSSSL*PASTCG Trigger: CCCACAAGTGGAAGCCGGCAAGAGGCTGGAGGAGCT...ATAACCACAACTAGAGATGTTCATGGTCAAAGTACTGCCTTTGCAGAGGAGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | TGCCATGCTTCTGCTCACGTTACCTGCCTGCTTCTACAGGAGGCAAAGTTGGTCGACCTTATCCACAGATaGCTTTTCCCAGAGGTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: CHASAHVTCLLLQEAKLVDLIHR*LFPEVP Trigger: CGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTC...GACCAACTTTGCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAGAAGCATGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 |
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| CDS-3UTR CAA 90 bp | ACTCCAACGATGGAAGTCATTTTCATGGGTGTGCCATGTGCACTCTGTTCGTCTGCTCCTTTCTCCCCCTaGTCCTTGGCTTCTCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TPTMEVIFMGVPCALCSSAPFSP*SLASRF Trigger: GAAGCGAGAAGCCAAGGACAAGGGGGAGAAAGGAGC...AGACGAACAGAGTGCACATGGCACACCCATGAAAATGACTTCCATCGTTGGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115027.8 |
||
| CDS-3UTR CAA 90 bp | GACCTTATCCACAGATTGCTTTTCCCAGAGGTTCCGCTTGCCAGATACATCTCCGAAGCCAGAGAAGGCTaGGGAGCAGGTGACTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: DLIHRLLFPEVPLARYISEAREG*GAGDLL Trigger: CAACAAGTCACCTGCTCCCAAGCCTTCTCTGGCTTC...GGAGATGTATCTGGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149009.8 |
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| CDS TCA 90 bp | CCTTTAACTCCTTTCTCTTCTTCCTGCGTCTTTGGGACAGCTGTCTaGAGTCTGTCGTCTGGGGCCTCCCTTTCATTCACTCCTTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PLTPFSSSCVFGTAV*SLSSGASLSFTPFL Trigger: CAGGAAAGGAGTGAATGAAAGGGAGGCCCCAGACGACAGACTTCAGACAGCTGTCCCAAAGACGCAGGAAGAAGAGAAAGGAGTTAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115027.8 |
||
| CDS-3UTR CAA 90 bp | TGCCATGCTTCTGCTCACGTTACCTGCCTGCTTCTACAGGAGGCAAAGTTGGTCTTCCTGAAGGCGTTTTaGACGTCTCTCTTCTCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: CHASAHVTCLLLQEAKLVFLKAF*TSLFSS Trigger: AGACGAGAAGAGAGACGTCAAAAACGCCTTCAGGAA...GACCAACTTTGCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAGAAGCATGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| CDS-3UTR CAA 90 bp | TTTCCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTGTTCATATGACAGTAGCAGCTCCTCCAGCCTCTaGCCGGCTTCCACTTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: FPFVDFRCGWCHCSYDSSSSSSL*PASTCG Trigger: CCCACAAGTGGAAGCCGGCAAGAGGCTGGAGGAGCT...GCTACTGTCATATGAACAGTGACACCAACCACATCGGAAGTCAACAAAAGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| CDS-3UTR CAA 90 bp | CTACGGGGTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGTCCCAGAGGTTCCGCTaGCCAGATACATCTCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LRGRFAPRYCIHSSDNLKSQRFR*PDTSPG Trigger: GCCAGGAGATGTATCTGGCAAGCGGAACCTCTGGGA...CTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGACCCCGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 |
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| CDS-3UTR CAA 90 bp | ACTCCAACGATGGAAGTCATTTTCATGGGTGTGCCATGTGCACTCTGTTCGTCTTCCTCCTCCTCTGCCTaGGCCTTTTTCTGTGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TPTMEVIFMGVPCALCSSSSSSA*AFFCAS Trigger: TGAGGCACAGAAAAAGGCCAAGGCAGAGGAGGAGGA...AGACGAACAGAGTGCACATGGCACACCCATGAAAATGACTTCCATCGTTGGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115027.8 |
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| CDS TCA 90 bp | TGTCTCATTTTCGGCGGAGTCATTTTGCATTCTTCGGCTTGGGCCTaGGAGACTGCCATCTGTTATGGTCGGATCAAACTCCTTCTGACG | + |
|
Preference number: 5 (lower is better) Translates to: CLIFGGVILHSSAWA*ETAICYGRIKLLLT Trigger: CGTCAGAAGGAGTTTGATCCGACCATAACAGATGGCAGTCTCTCAGGCCCAAGCCGAAGAATGCAAAATGACTCCGCCGAAAATGAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000142512.8 ENSMUST00000149009.8 |
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| CDS-3UTR CAA 90 bp | AAGATAGGACTGCCATGCTTCTGCTCACGTTACCTGCCTGCTTCTACAGGAGGCCTATCCAAGAAGCTCTaGACTTCTTCTTTGGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: KIGLPCFCSRYLPASTGGLSKKL*TSSLGS Trigger: AGAGCCCAAAGAAGAAGTCAAGAGCTTCTTGGATAG...GCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAGAAGCATGGCAGTCCTATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| CDS-3UTR CAA 90 bp | ACTGGGATATTGGAAAACATAAATATAAACAGAGCGATTAGCCCTCTCCAACTGGCACCTTCAGCTTCCTaGTCCCCACTGGCCCGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: TGILENININRAISPLQLAPSAS*SPLARP Trigger: AGGCCGGGCCAGTGGGGACAAGGAAGCTGAAGGTGC...CAGTTGGAGAGGGCTAATCGCTCTGTTTATATTTATGTTTTCCAATATCCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| CDS-3UTR CAA 90 bp | GTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTCTTGCCGGCTTCCACTaGTGGGGCACCTTCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VVSPLDTAYIPQIILSSVLAGFH*WGTFSF Trigger: GAAGCTGAAGGTGCCCCACAAGTGGAAGCCGGCAAG...AACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| CDS-3UTR CAA 90 bp | GGTAGAGAAGGAGACACCTTAGATATAATACAGGTCAACTTTTTGACGTGGGGTCTTGCCGGCTTCCACTaGTGGGGCACCTTCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GREGDTLDIIQVNFLTWGLAGFH*WGTFSF Trigger: GAAGCTGAAGGTGCCCCACAAGTGGAAGCCGGCAAG...ACCCCACGTCAAAAAGTTGACCTGTATTATATCTAAGGTGTCTCCTTCTCTACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| CDS-3UTR CAA 90 bp | CCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTGTTCATATGACAGTAGCGAGAGCCGGCTGTCAATCTaGGAGACTACTGCTGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: PFVDFRCGWCHCSYDSSESRLSI*ETTAAW Trigger: CCAAGCAGCAGTAGTCTCCAAGATTGACAGCCGGCT...CTCGCTACTGTCATATGAACAGTGACACCAACCACATCGGAAGTCAACAAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | ACTCCAACGATGGAAGTCATTTTCATGGGTGTGCCATGTGCACTCTGTTCGTCTCCATCCCCTTCTATTTaGGACTCTTCTGCGCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: TPTMEVIFMGVPCALCSSPSPSI*DSSALT Trigger: GGTCAGCGCAGAAGAGTCCAAAATAGAAGGGGATGG...AGACGAACAGAGTGCACATGGCACACCCATGAAAATGACTTCCATCGTTGGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115027.8 |
||
| CDS GCA 90 bp | TGCATTGGTGTACTGCTCCAGCCGGCTGTCAATCTTGGAGACTACTaGTGCTTGGTGAGTAGATCTGACACCACTTTTCTGCACAGATTT | + |
|
Preference number: 5 (lower is better) Translates to: CIGVLLQPAVNLGDY*CLVSRSDTTFLHRF Trigger: AAATCTGTGCAGAAAAGTGGTGTCAGATCTACTCACCAAGCAGCAGTAGTCTCCAAGATTGACAGCCGGCTGGAGCAGTACACCAATGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS GCA 90 bp | TGTTCTGCTTCGACTCTTGCCCGTTCCTCTGCTAGCTTTCTGTCCTaGTCAGCTTTGATTCTTTCTTGTTCTTGTCCCTCCACTTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: CSASTLARSSASFLS*SALILSCSCPSTSN Trigger: GTTGGAAGTGGAGGGACAAGAACAAGAAAGAATCAAAGCTGAGCAGGACAGAAAGCTAGCAGAGGAACGGGCAAGAGTCGAAGCAGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115027.8 ENSMUST00000136907.8 |
||
| CDS-3UTR CAA 90 bp | TACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGCACCTTCAGCTTCCTaGTCCCCACTGGCCCGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: YCIHSSDNLKLSFLLLTSAPSAS*SPLARP Trigger: AGGCCGGGCCAGTGGGGACAAGGAAGCTGAAGGTGC...GGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | GCTTCTTCAAAGGTTAAATCCAAACGGAGAAAAATCTACCCTAAAACTCATCGTGCACCTTCAGCTTCCTaGTCCCCACTGGCCCGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: ASSKVKSKRRKIYPKTHRAPSAS*SPLARP Trigger: AGGCCGGGCCAGTGGGGACAAGGAAGCTGAAGGTGC...ACGATGAGTTTTAGGGTAGATTTTTCTCCGTTTGGATTTAACCTTTGAAGAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | CATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGATGTGGTTAGCTCCTCCAGCCTCTaGCCGGCTTCCACTTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: HSSDNLKLSFLLLTSDVVSSSSL*PASTCG Trigger: CCCACAAGTGGAAGCCGGCAAGAGGCTGGAGGAGCT...AACCACATCGGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATCTGAGGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | CCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTGTTCATATGACAGTAGCGAGGGAGACTACTGCTGCTaGGTGAGTAGATCTGACACC | + |
|
Preference number: 5 (lower is better) Translates to: PFVDFRCGWCHCSYDSSEGDYCC*VSRSDT Trigger: GGTGTCAGATCTACTCACCAAGCAGCAGTAGTCTCC...CTCGCTACTGTCATATGAACAGTGACACCAACCACATCGGAAGTCAACAAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | CTACGGGGTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCCAGCAGTTTCCTTATaGGGTGTTCCTGAGGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LRGRFAPRYCIHSSDNLKPAVSL*GVPEAE Trigger: CTCTGCCTCAGGAACACCCAATAAGGAAACTGCTGG...CTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGACCCCGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | CCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTGTTCATATGACAGTAGCGAGCTCAAGTCAGAAGGCTaGGGAGCAGGTGACTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PFVDFRCGWCHCSYDSSELKSEG*GAGDLL Trigger: CAACAAGTCACCTGCTCCCAAGCCTTCTGACTTGAG...CTCGCTACTGTCATATGAACAGTGACACCAACCACATCGGAAGTCAACAAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 |
||
| CDS-3UTR CAA 90 bp | CTGCCTGCTTCTACAGGAGGCAAAGTTGGTCTTTCTTTAGACATCTACATGAATTCCCAGAGGTTCCGCTaGCCAGATACATCTCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LPASTGGKVGLSLDIYMNSQRFR*PDTSPG Trigger: GCCAGGAGATGTATCTGGCAAGCGGAACCTCTGGGA...ATTCATGTAGATGTCTAAAGAAAGACCAACTTTGCCTCCTGTAGAAGCAGGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 |
||
| CDS-3UTR CAA 90 bp | ACAATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTCCTCTCTTAAAGTCCCAGAGGTTCCGCTaGCCAGATACATCTCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TMADSQNMLVSLQFPLLKSQRFR*PDTSPG Trigger: GCCAGGAGATGTATCTGGCAAGCGGAACCTCTGGGA...CTTTAAGAGAGGAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 |
||
| CDS-3UTR CAA 90 bp | ACTCCAACGATGGAAGTCATTTTCATGGGTGTGCCATGTGCACTCTGTTCGTCTCAGCACAGCCTCCTCTaGGATTTCTGGTGTTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: TPTMEVIFMGVPCALCSSQHSLL*DFWCFL Trigger: GAGAAAACACCAGAAATCCAAGAGGAGGCTGTGCTG...AGACGAACAGAGTGCACATGGCACACCCATGAAAATGACTTCCATCGTTGGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115027.8 |
||
| CDS-3UTR CAA 90 bp | CGGGGTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCTTCCTGAAGGCGTTTTaGACGTCTCTCTTCTCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RGRFAPRYCIHSSDNLKLFLKAF*TSLFSS Trigger: AGACGAGAAGAGAGACGTCAAAAACGCCTTCAGGAA...GAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGACCCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | GACTTCCGATGTGGTTGGTGTCACTGTTCATATGACAGTAGCGAGTTTACTTCATTTGCATTCTTCGGCTaGGGCCTGAGAGACTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: DFRCGWCHCSYDSSEFTSFAFFG*GLRDCH Trigger: ATGGCAGTCTCTCAGGCCCAAGCCGAAGAATGCAAA...TGAAGTAAACTCGCTACTGTCATATGAACAGTGACACCAACCACATCGGAAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | AAGATAGGACTGCCATGCTTCTGCTCACGTTACCTGCCTGCTTCTACAGGAGGCTCGGTTTGTTTAAGTTaGTGGGTCATGAATTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KIGLPCFCSRYLPASTGGSVCLS*WVMNSP Trigger: TGGAGAATTCATGACCCACAAACTTAAACAAACCGA...GCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAGAAGCATGGCAGTCCTATCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | AAGATAGGACTGCCATGCTTCTGCTCACGTTACCTGCCTGCTTCTACAGGAGGCGAAAGCATTCTCGGTTaGTTTAAGTTTGTGGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: KIGLPCFCSRYLPASTGGESILG*FKFVGH Trigger: ATGACCCACAAACTTAAACAAACCGAGAATGCTTTC...GCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAGAAGCATGGCAGTCCTATCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | AAGATAGGACTGCCATGCTTCTGCTCACGTTACCTGCCTGCTTCTACAGGAGGCTCCTGTTGCTTCTGTTaGAGTTTTTCAAACTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: KIGLPCFCSRYLPASTGGSCCFC*SFSNSS Trigger: CGAAGAGTTTGAAAAACTCAAACAGAAGCAACAGGA...GCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAGAAGCATGGCAGTCCTATCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | CGGGGTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCCAAGGCTGCCTCCTGTaGCTTCTGTTTGAGTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RGRFAPRYCIHSSDNLKLQGCLL*LLFEFF Trigger: GAAAAACTCAAACAGAAGCAACAGGAGGCAGCCTTG...GAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGACCCCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | CTGCTCACGTTACCTGCCTGCTTCTACAGGAGGCAAAGTTGGTCTTTCTTTAGACAAGGCTGCCTCCTGTaGCTTCTGTTTGAGTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLTLPACFYRRQSWSFFRQGCLL*LLFEFF Trigger: GAAAAACTCAAACAGAAGCAACAGGAGGCAGCCTTG...TCTAAAGAAAGACCAACTTTGCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | CGGGGTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCTTAGGAGTGAAGCACTaGAACGGCTTCTTGTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RGRFAPRYCIHSSDNLKLLGVKH*NGFLSS Trigger: AGAGGACAAGAAGCCGTTCAAGTGCTTCACTCCTAA...GAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGACCCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | CTGCTCACGTTACCTGCCTGCTTCTACAGGAGGCAAAGTTGGTCTTTCTTTAGATTAGGAGTGAAGCACTaGAACGGCTTCTTGTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLTLPACFYRRQSWSFFRLGVKH*NGFLSS Trigger: AGAGGACAAGAAGCCGTTCAAGTGCTTCACTCCTAA...TCTAAAGAAAGACCAACTTTGCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | CTACGGGGTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGGCTCGTTCCTCTATCTaGAGAGACGAGCCTTTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LRGRFAPRYCIHSSDNLKARSSI*RDEPLG Trigger: TCCTAAAGGCTCGTCTCTCAAGATAGAGGAACGAGC...CTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGACCCCGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTGTTCATATGACAGTAGCAGCCGGCTGTCAATCTaGGAGACTACTGCTGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: FPFVDFRCGWCHCSYDSSSRLSI*ETTAAW Trigger: CCAAGCAGCAGTAGTCTCCAAGATTGACAGCCGGCT...GCTACTGTCATATGAACAGTGACACCAACCACATCGGAAGTCAACAAAAGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | GTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTAGCCGGCTGTCAATCTaGGAGACTACTGCTGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: VVSPLDTAYIPQIILSSVSRLSI*ETTAAW Trigger: CCAAGCAGCAGTAGTCTCCAAGATTGACAGCCGGCT...AACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | CTGCCTGCTTCTACAGGAGGCAAAGTTGGTCTTTCTTTAGACATCTACATGAATTTCTCCCACATGCTCTaGATATTGCGGACGCCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LPASTGGKVGLSLDIYMNFSHML*ILRTPS Trigger: CGAGGGCGTCCGCAATATCAAGAGCATGTGGGAGAA...ATTCATGTAGATGTCTAAAGAAAGACCAACTTTGCCTCCTGTAGAAGCAGGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | AGGCTCCTCTGCAAAGGCAGTACTTTGACCATGAACATCTCTAGTTGTGGTTATCCAGCAGTTTCCTTATaGGGTGTTCCTGAGGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RLLCKGSTLTMNISSCGYPAVSL*GVPEAE Trigger: CTCTGCCTCAGGAACACCCAATAAGGAAACTGCTGG...ATAACCACAACTAGAGATGTTCATGGTCAAAGTACTGCCTTTGCAGAGGAGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | GGTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTCCAGCAGTTTCCTTATaGGGTGTTCCTGAGGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GRFAPRYCIHSSDNLKLSPAVSL*GVPEAE Trigger: CTCTGCCTCAGGAACACCCAATAAGGAAACTGCTGG...ACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | CTGCTCACGTTACCTGCCTGCTTCTACAGGAGGCAAAGTTGGTCTTTCTTTAGAGGAGCAGGTGACTTGTaGCCATCTGGTGATTTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LLTLPACFYRRQSWSFFRGAGDL*PSGDLV Trigger: AACTAAATCACCAGATGGCAACAAGTCACCTGCTCC...TCTAAAGAAAGACCAACTTTGCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | CCTGCCTGCTTCTACAGGAGGCAAAGTTGGTCTTTCTTTAGACATCTACATGAACTCAAGTCAGAAGGCTaGGGAGCAGGTGACTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PACFYRRQSWSFFRHLHELKSEG*GAGDLL Trigger: CAACAAGTCACCTGCTCCCAAGCCTTCTGACTTGAG...TTCATGTAGATGTCTAAAGAAAGACCAACTTTGCCTCCTGTAGAAGCAGGCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 |
||
| CDS-3UTR CAA 90 bp | TTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTCCCAGAGGTTCCGCTaGCCAGATACATCTCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: FAPRYCIHSSDNLKLSFLSQRFR*PDTSPG Trigger: GCCAGGAGATGTATCTGGCAAGCGGAACCTCTGGGA...AAGGAAACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 |
||
| CDS-3UTR CAA 90 bp | CCTGCCTGCTTCTACAGGAGGCAAAGTTGGTCTTTCTTTAGACATCTACATGAACATCTCCTCCCTCTTTaGTCTCCTGAGTTCTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: PACFYRRQSWSFFRHLHEHLLPL*SPEFSA Trigger: CGCAGAGAACTCAGGAGACAAAAGAGGGAGGAGATG...TTCATGTAGATGTCTAAAGAAAGACCAACTTTGCCTCCTGTAGAAGCAGGCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079391.10 ENSMUST00000115026.8 ENSMUST00000115027.8 |
||
| CDS-3UTR CAA 90 bp | GGTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTCTTCTTCCTGCGTCTTaGGGACAGCTGTCTGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: GRFAPRYCIHSSDNLKLSLLPAS*GQLSEV Trigger: GACTTCAGACAGCTGTCCCAAAGACGCAGGAAGAAG...ACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115027.8 |
||
| CDS TCA 90 bp | TTTTTAATCTTCTCATCTTTGATCTGCGTCTTTGGGACAGCTGTCTaGAGTCTGTCGTCTGGGGCCTCCCTTTCATTCACTCCTTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: FLIFSSLICVFGTAV*SLSSGASLSFTPFL Trigger: CAGGAAAGGAGTGAATGAAAGGGAGGCCCCAGACGACAGACTTCAGACAGCTGTCCCAAAGACGCAGATCAAAGATGAGAAGATTAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142716.3 |
||
| CDS GCA 90 bp | ATTGGTGTACTGCTCCAGCCGGCTGTCAATCTTGGAGACTACTGCTaGTTGGTGAGTAGATCTGACACCACTTTTCTGCACAGATTTATT | + |
|
Preference number: 5 (lower is better) Translates to: IGVLLQPAVNLGDYC*LVSRSDTTFLHRFI Trigger: AATAAATCTGTGCAGAAAAGTGGTGTCAGATCTACTCACCAAGCAGCAGTAGTCTCCAAGATTGACAGCCGGCTGGAGCAGTACACCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS CCA 90 bp | CGGCCTCCTGAACGGCTGAAAGCATTCTCGGTTTGTTTAAGTTTGTaGGTCATGAATTCTCCATTCTGCGCCTTCACTTCTGTAAATCCT | + |
|
Preference number: 5 (lower is better) Translates to: RPPERLKAFSVCLSL*VMNSPFCAFTSVNP Trigger: AGGATTTACAGAAGTGAAGGCGCAGAATGGAGAATTCATGACCCACAAACTTAAACAAACCGAGAATGCTTTCAGCCGTTCAGGAGGCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS CCA 90 bp | CCTGAACGGCTGGGGCTGAAAGCATTCTCGGTTTGTTTAAGTTTGTaGGTCATGAATTCTCCATTCTGCGCCTTCACTTCTGTAAATCCT | + |
|
Preference number: 5 (lower is better) Translates to: PERLGLKAFSVCLSL*VMNSPFCAFTSVNP Trigger: AGGATTTACAGAAGTGAAGGCGCAGAATGGAGAATTCATGACCCACAAACTTAAACAAACCGAGAATGCTTTCAGCCCCAGCCGTTCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000123823.8 ENSMUST00000126181.8 ENSMUST00000136907.8 ENSMUST00000142716.3 |
||
| CDS-3UTR CAA 90 bp | GTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTCAAGGATTCTTCCTCTaGCTTCTGCCGCAGCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VVSPLDTAYIPQIILSSVQGFFL*LLPQPF Trigger: GAAAGGCTGCGGCAGAAGCAAGAGGAAGAATCCTTG...AACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | CCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTGTTCATATGACAGTAGCGAGTTCCTGAAGGCGTTTTaGACGTCTCTCTTCTCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PFVDFRCGWCHCSYDSSEFLKAF*TSLFSS Trigger: AGACGAGAAGAGAGACGTCAAAAACGCCTTCAGGAA...CTCGCTACTGTCATATGAACAGTGACACCAACCACATCGGAAGTCAACAAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | ACAATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTCCTCTCTTAAAGTTTGCATTCTTCGGCTaGGGCCTGAGAGACTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: TMADSQNMLVSLQFPLLKFAFFG*GLRDCH Trigger: ATGGCAGTCTCTCAGGCCCAAGCCGAAGAATGCAAA...CTTTAAGAGAGGAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | TACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCCTTGCCGGCTTCCACTaGTGGGGCACCTTCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: YCIHSSDNLKLSFLLLTSLAGFH*WGTFSF Trigger: GAAGCTGAAGGTGCCCCACAAGTGGAAGCCGGCAAG...GGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | AGGCTCCTCTGCAAAGGCAGTACTTTGACCATGAACATCTCTAGTTGTGGTTATGCTCGTTCCTCTATCTaGAGAGACGAGCCTTTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RLLCKGSTLTMNISSCGYARSSI*RDEPLG Trigger: TCCTAAAGGCTCGTCTCTCAAGATAGAGGAACGAGC...ATAACCACAACTAGAGATGTTCATGGTCAAAGTACTGCCTTTGCAGAGGAGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | GATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTAGCCGGCTGTCAATCTaGGAGACTACTGCTGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: DNLKLSFLLLTSDVVGVTSRLSI*ETTAAW Trigger: CCAAGCAGCAGTAGTCTCCAAGATTGACAGCCGGCT...AGTGACACCAACCACATCGGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | GATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTTTCTCCCACATGCTCTaGATATTGCGGACGCCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: DNLKLSFLLLTSDVVGVTFSHML*ILRTPS Trigger: CGAGGGCGTCCGCAATATCAAGAGCATGTGGGAGAA...AGTGACACCAACCACATCGGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | TTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTTCTCCCACATGCTCTaGATATTGCGGACGCCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: FAPRYCIHSSDNLKLSFLFSHML*ILRTPS Trigger: CGAGGGCGTCCGCAATATCAAGAGCATGTGGGAGAA...AAGGAAACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | CTGCCTGCTTCTACAGGAGGCAAAGTTGGTCTTTCTTTAGACATCTACATGAATCCAGCAGTTTCCTTATaGGGTGTTCCTGAGGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LPASTGGKVGLSLDIYMNPAVSL*GVPEAE Trigger: CTCTGCCTCAGGAACACCCAATAAGGAAACTGCTGG...ATTCATGTAGATGTCTAAAGAAAGACCAACTTTGCCTCCTGTAGAAGCAGGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | AGGCTCCTCTGCAAAGGCAGTACTTTGACCATGAACATCTCTAGTTGTGGTTATGACCTTATCCACAGATaGCTTTTCCCAGAGGTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: RLLCKGSTLTMNISSCGYDLIHR*LFPEVP Trigger: CGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTC...ATAACCACAACTAGAGATGTTCATGGTCAAAGTACTGCCTTTGCAGAGGAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 |
||
| CDS-3UTR CAA 90 bp | ACAATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTCCTCTCTTAAAGCATCTCCTCCCTCTTTaGTCTCCTGAGTTCTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: TMADSQNMLVSLQFPLLKHLLPL*SPEFSA Trigger: CGCAGAGAACTCAGGAGACAAAAGAGGGAGGAGATG...CTTTAAGAGAGGAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079391.10 ENSMUST00000115026.8 ENSMUST00000115027.8 |
||
| CDS-3UTR CAA 90 bp | TCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTTTTGCATTCTTCGGCTaGGGCCTGAGAGACTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SPLDTAYIPQIILSSVSFFAFFG*GLRDCH Trigger: ATGGCAGTCTCTCAGGCCCAAGCCGAAGAATGCAAA...AAAGGAAACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGA 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | GATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTTTTGCATTCTTCGGCTaGGGCCTGAGAGACTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: DNLKLSFLLLTSDVVGVTFAFFG*GLRDCH Trigger: ATGGCAGTCTCTCAGGCCCAAGCCGAAGAATGCAAA...AGTGACACCAACCACATCGGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | CGGGGTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCCTTTTGTCTTTGAGCTaGCCCTTTAACTCCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RGRFAPRYCIHSSDNLKLLLSLS*PFNSFL Trigger: GAGAAAGGAGTTAAAGGGCAAGCTCAAAGACAAAAG...GAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGACCCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031775.13 ENSMUST00000115027.8 |
||
| CDS-3UTR CAA 90 bp | CCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTGTTCATATGACAGTAGCGAGCTATCCAAGAAGCTCTaGACTTCTTCTTTGGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PFVDFRCGWCHCSYDSSELSKKL*TSSLGS Trigger: AGAGCCCAAAGAAGAAGTCAAGAGCTTCTTGGATAG...CTCGCTACTGTCATATGAACAGTGACACCAACCACATCGGAAGTCAACAAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | GACCTTATCCACAGATTGCTTTTCCCAGAGGTTCCGCTTGCCAGATACATCTCCTCGGTTTGTTTAAGTTaGTGGGTCATGAATTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: DLIHRLLFPEVPLARYISSVCLS*WVMNSP Trigger: TGGAGAATTCATGACCCACAAACTTAAACAAACCGA...GGAGATGTATCTGGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | AGGCTCCTCTGCAAAGGCAGTACTTTGACCATGAACATCTCTAGTTGTGGTTATCAAGGCTGCCTCCTGTaGCTTCTGTTTGAGTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RLLCKGSTLTMNISSCGYQGCLL*LLFEFF Trigger: GAAAAACTCAAACAGAAGCAACAGGAGGCAGCCTTG...ATAACCACAACTAGAGATGTTCATGGTCAAAGTACTGCCTTTGCAGAGGAGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | AGGCTCCTCTGCAAAGGCAGTACTTTGACCATGAACATCTCTAGTTGTGGTTATTTAGGAGTGAAGCACTaGAACGGCTTCTTGTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RLLCKGSTLTMNISSCGYLGVKH*NGFLSS Trigger: AGAGGACAAGAAGCCGTTCAAGTGCTTCACTCCTAA...ATAACCACAACTAGAGATGTTCATGGTCAAAGTACTGCCTTTGCAGAGGAGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTGTTCATATGACAGTAGCGCTCGTTCCTCTATCTaGAGAGACGAGCCTTTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: FPFVDFRCGWCHCSYDSSARSSI*RDEPLG Trigger: TCCTAAAGGCTCGTCTCTCAAGATAGAGGAACGAGC...GCTACTGTCATATGAACAGTGACACCAACCACATCGGAAGTCAACAAAAGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | CTGCCTGCTTCTACAGGAGGCAAAGTTGGTCTTTCTTTAGACATCTACATGAATGCTCGTTCCTCTATCTaGAGAGACGAGCCTTTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LPASTGGKVGLSLDIYMNARSSI*RDEPLG Trigger: TCCTAAAGGCTCGTCTCTCAAGATAGAGGAACGAGC...ATTCATGTAGATGTCTAAAGAAAGACCAACTTTGCCTCCTGTAGAAGCAGGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | TCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTGGAGACTACTGCTGCTaGGTGAGTAGATCTGACACC | + |
|
Preference number: 5 (lower is better) Translates to: SPLDTAYIPQIILSSVSFGDYCC*VSRSDT Trigger: GGTGTCAGATCTACTCACCAAGCAGCAGTAGTCTCC...AAAGGAAACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | CCTTTCCTCTTGAAAAGAAATCTGTGGATTGGAAATGTTAGAGGCTCTCCTACTGGAGACTACTGCTGCTaGGTGAGTAGATCTGACACC | + |
|
Preference number: 5 (lower is better) Translates to: PFLLKRNLWIGNVRGSPTGDYCC*VSRSDT Trigger: GGTGTCAGATCTACTCACCAAGCAGCAGTAGTCTCC...AGTAGGAGAGCCTCTAACATTTCCAATCCACAGATTTCTTTTCAAGAGGAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | GACTTCCGATGTGGTTGGTGTCACTGTTCATATGACAGTAGCGAGTTTACTTCAGGAGCAGGTGACTTGTaGCCATCTGGTGATTTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: DFRCGWCHCSYDSSEFTSGAGDL*PSGDLV Trigger: AACTAAATCACCAGATGGCAACAAGTCACCTGCTCC...TGAAGTAAACTCGCTACTGTCATATGAACAGTGACACCAACCACATCGGAAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | TCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTCTCAAGTCAGAAGGCTaGGGAGCAGGTGACTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SPLDTAYIPQIILSSVSFLKSEG*GAGDLL Trigger: CAACAAGTCACCTGCTCCCAAGCCTTCTGACTTGAG...AAAGGAAACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 |
||
| CDS-3UTR CAA 90 bp | CCTTTCCTCTTGAAAAGAAATCTGTGGATTGGAAATGTTAGAGGCTCTCCTACTCTCAAGTCAGAAGGCTaGGGAGCAGGTGACTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PFLLKRNLWIGNVRGSPTLKSEG*GAGDLL Trigger: CAACAAGTCACCTGCTCCCAAGCCTTCTGACTTGAG...AGTAGGAGAGCCTCTAACATTTCCAATCCACAGATTTCTTTTCAAGAGGAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 |
||
| CDS-3UTR CAA 90 bp | ACAATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTCCTCTCTTAAAGGACCTTATCCACAGATaGCTTTTCCCAGAGGTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: TMADSQNMLVSLQFPLLKDLIHR*LFPEVP Trigger: CGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTC...CTTTAAGAGAGGAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 |
||
| CDS-3UTR CAA 90 bp | TCATTTTCATGGGTGTGCCATGTGCACTCTGTTCGTCTTACCATAGACTTGTGTTATCTCCTCCATGTCTaGTTCCCCATCCCCTTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: SFSWVCHVHSVRLTIDLCYLLHV*FPIPFY Trigger: ATAGAAGGGGATGGGGAACAAGACATGGAGGAGATA...ACACAAGTCTATGGTAAGACGAACAGAGTGCACATGGCACACCCATGAAAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115027.8 |
||
| CDS-3UTR CAA 90 bp | CTGCTCACGTTACCTGCCTGCTTCTACAGGAGGCAAAGTTGGTCTTTCTTTAGAGAAAGCATTCTCGGTTaGTTTAAGTTTGTGGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: LLTLPACFYRRQSWSFFRESILG*FKFVGH Trigger: ATGACCCACAAACTTAAACAAACCGAGAATGCTTTC...TCTAAAGAAAGACCAACTTTGCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | ACTCCAACGATGGAAGTCATTTTCATGGGTGTGCCATGTGCACTCTGTTCGTCTGAAAGCATTCTCGGTTaGTTTAAGTTTGTGGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: TPTMEVIFMGVPCALCSSESILG*FKFVGH Trigger: ATGACCCACAAACTTAAACAAACCGAGAATGCTTTC...AGACGAACAGAGTGCACATGGCACACCCATGAAAATGACTTCCATCGTTGGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | CTGCTCACGTTACCTGCCTGCTTCTACAGGAGGCAAAGTTGGTCTTTCTTTAGATCCTGTTGCTTCTGTTaGAGTTTTTCAAACTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: LLTLPACFYRRQSWSFFRSCCFC*SFSNSS Trigger: CGAAGAGTTTGAAAAACTCAAACAGAAGCAACAGGA...TCTAAAGAAAGACCAACTTTGCCTCCTGTAGAAGCAGGCAGGTAACGTGAGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTGTTCATATGACAGTAGCCAAGGCTGCCTCCTGTaGCTTCTGTTTGAGTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FPFVDFRCGWCHCSYDSSQGCLL*LLFEFF Trigger: GAAAAACTCAAACAGAAGCAACAGGAGGCAGCCTTG...GCTACTGTCATATGAACAGTGACACCAACCACATCGGAAGTCAACAAAAGGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTGTTCATATGACAGTAGCTTAGGAGTGAAGCACTaGAACGGCTTCTTGTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: FPFVDFRCGWCHCSYDSSLGVKH*NGFLSS Trigger: AGAGGACAAGAAGCCGTTCAAGTGCTTCACTCCTAA...GCTACTGTCATATGAACAGTGACACCAACCACATCGGAAGTCAACAAAAGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | TTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCCTTGCTCGTTCCTCTATCTaGAGAGACGAGCCTTTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: FAPRYCIHSSDNLKLSFLARSSI*RDEPLG Trigger: TCCTAAAGGCTCGTCTCTCAAGATAGAGGAACGAGC...AAGGAAACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | ACTGGGATATTGGAAAACATAAATATAAACAGAGCGATTAGCCCTCTCCAACTGGGAGACTACTGCTGCTaGGTGAGTAGATCTGACACC | + |
|
Preference number: 5 (lower is better) Translates to: TGILENININRAISPLQLGDYCC*VSRSDT Trigger: GGTGTCAGATCTACTCACCAAGCAGCAGTAGTCTCC...CAGTTGGAGAGGGCTAATCGCTCTGTTTATATTTATGTTTTCCAATATCCCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | CATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGATGTGGTTGGAGACTACTGCTGCTaGGTGAGTAGATCTGACACC | + |
|
Preference number: 5 (lower is better) Translates to: HSSDNLKLSFLLLTSDVVGDYCC*VSRSDT Trigger: GGTGTCAGATCTACTCACCAAGCAGCAGTAGTCTCC...AACCACATCGGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATCTGAGGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | GCTTCTTCAAAGGTTAAATCCAAACGGAGAAAAATCTACCCTAAAACTCATCGTAGCCGGCTGTCAATCTaGGAGACTACTGCTGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ASSKVKSKRRKIYPKTHRSRLSI*ETTAAW Trigger: CCAAGCAGCAGTAGTCTCCAAGATTGACAGCCGGCT...ACGATGAGTTTTAGGGTAGATTTTTCTCCGTTTGGATTTAACCTTTGAAGAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | CTCTTAAAGATAACAGAGAGCTGTAATCAAACAAGTAGAGGAGGAATTTGCTTCTTCTCCCACATGCTCTaGATATTGCGGACGCCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LLKITESCNQTSRGGICFFSHML*ILRTPS Trigger: CGAGGGCGTCCGCAATATCAAGAGCATGTGGGAGAA...GAAGCAAATTCCTCCTCTACTTGTTTGATTACAGCTCTCTGTTATCTTTAAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | GATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTGACCTTATCCACAGATaGCTTTTCCCAGAGGTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: DNLKLSFLLLTSDVVGVTDLIHR*LFPEVP Trigger: CGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTC...AGTGACACCAACCACATCGGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 |
||
| CDS-3UTR CAA 90 bp | CATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGATGTGGTTTCGCTTCTCACTCCTTaGCTCCTCCAGCTGCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: HSSDNLKLSFLLLTSDVVSLLTP*LLQLLF Trigger: AAACAGCAGCTGGAGGAGCAAAGGAGTGAGAAGCGA...AACCACATCGGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATCTGAGGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115027.8 |
||
| CDS-3UTR CAA 90 bp | ACTGGGATATTGGAAAACATAAATATAAACAGAGCGATTAGCCCTCTCCAACTGTCTCTGATAGGCAATTaGAGAGAGTGTGGCCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TGILENININRAISPLQLSLIGN*RECGQA Trigger: TGCCTGGCCACACTCTCTCAAATTGCCTATCAGAGA...CAGTTGGAGAGGGCTAATCGCTCTGTTTATATTTATGTTTTCCAATATCCCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031775.13 ENSMUST00000115021.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | GATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTTTCCTGAAGGCGTTTTaGACGTCTCTCTTCTCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: DNLKLSFLLLTSDVVGVTFLKAF*TSLFSS Trigger: AGACGAGAAGAGAGACGTCAAAAACGCCTTCAGGAA...AGTGACACCAACCACATCGGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | GTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTCTATCCAAGAAGCTCTaGACTTCTTCTTTGGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VVSPLDTAYIPQIILSSVLSKKL*TSSLGS Trigger: AGAGCCCAAAGAAGAAGTCAAGAGCTTCTTGGATAG...AACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | CTACGGGGTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGTCCTGTTGCTTCTGTTaGAGTTTTTCAAACTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: LRGRFAPRYCIHSSDNLKSCCFC*SFSNSS Trigger: CGAAGAGTTTGAAAAACTCAAACAGAAGCAACAGGA...CTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGACCCCGTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | GATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTCAAGGCTGCCTCCTGTaGCTTCTGTTTGAGTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: DNLKLSFLLLTSDVVGVTQGCLL*LLFEFF Trigger: GAAAAACTCAAACAGAAGCAACAGGAGGCAGCCTTG...AGTGACACCAACCACATCGGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | TCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTTTAGGAGTGAAGCACTaGAACGGCTTCTTGTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SPLDTAYIPQIILSSVSFLGVKH*NGFLSS Trigger: AGAGGACAAGAAGCCGTTCAAGTGCTTCACTCCTAA...AAAGGAAACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | TTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTTAGGAGTGAAGCACTaGAACGGCTTCTTGTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: FAPRYCIHSSDNLKLSFLLGVKH*NGFLSS Trigger: AGAGGACAAGAAGCCGTTCAAGTGCTTCACTCCTAA...AAGGAAACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | CATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGATGTGGTTGCTCGTTCCTCTATCTaGAGAGACGAGCCTTTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: HSSDNLKLSFLLLTSDVVARSSI*RDEPLG Trigger: TCCTAAAGGCTCGTCTCTCAAGATAGAGGAACGAGC...AACCACATCGGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATCTGAGGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | TACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGGAGACTACTGCTGCTaGGTGAGTAGATCTGACACC | + |
|
Preference number: 5 (lower is better) Translates to: YCIHSSDNLKLSFLLLTSGDYCC*VSRSDT Trigger: GGTGTCAGATCTACTCACCAAGCAGCAGTAGTCTCC...GGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | GCTTCTTCAAAGGTTAAATCCAAACGGAGAAAAATCTACCCTAAAACTCATCGTCCAGCAGTTTCCTTATaGGGTGTTCCTGAGGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ASSKVKSKRRKIYPKTHRPAVSL*GVPEAE Trigger: CTCTGCCTCAGGAACACCCAATAAGGAAACTGCTGG...ACGATGAGTTTTAGGGTAGATTTTTCTCCGTTTGGATTTAACCTTTGAAGAAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | GATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTGGAGCAGGTGACTTGTaGCCATCTGGTGATTTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: DNLKLSFLLLTSDVVGVTGAGDL*PSGDLV Trigger: AACTAAATCACCAGATGGCAACAAGTCACCTGCTCC...AGTGACACCAACCACATCGGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | GCTTCTTCAAAGGTTAAATCCAAACGGAGAAAAATCTACCCTAAAACTCATCGTTCTCTGATAGGCAATTaGAGAGAGTGTGGCCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ASSKVKSKRRKIYPKTHRSLIGN*RECGQA Trigger: TGCCTGGCCACACTCTCTCAAATTGCCTATCAGAGA...ACGATGAGTTTTAGGGTAGATTTTTCTCCGTTTGGATTTAACCTTTGAAGAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115021.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | TTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCCTTCTATCCAAGAAGCTCTaGACTTCTTCTTTGGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: FAPRYCIHSSDNLKLSFLLSKKL*TSSLGS Trigger: AGAGCCCAAAGAAGAAGTCAAGAGCTTCTTGGATAG...AAGGAAACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | GATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTCTATCCAAGAAGCTCTaGACTTCTTCTTTGGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: DNLKLSFLLLTSDVVGVTLSKKL*TSSLGS Trigger: AGAGCCCAAAGAAGAAGTCAAGAGCTTCTTGGATAG...AGTGACACCAACCACATCGGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | CCTGCCTGCTTCTACAGGAGGCAAAGTTGGTCTTTCTTTAGACATCTACATGAATCGGTTTGTTTAAGTTaGTGGGTCATGAATTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PACFYRRQSWSFFRHLHESVCLS*WVMNSP Trigger: TGGAGAATTCATGACCCACAAACTTAAACAAACCGA...TTCATGTAGATGTCTAAAGAAAGACCAACTTTGCCTCCTGTAGAAGCAGGCAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | TCATTTTCATGGGTGTGCCATGTGCACTCTGTTCGTCTTACCATAGACTTGTGTGAAAGCATTCTCGGTTaGTTTAAGTTTGTGGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: SFSWVCHVHSVRLTIDLCESILG*FKFVGH Trigger: ATGACCCACAAACTTAAACAAACCGAGAATGCTTTC...ACACAAGTCTATGGTAAGACGAACAGAGTGCACATGGCACACCCATGAAAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | CCAACCCTTGAAAAACCCTCAAGCCAACCCTTTCCTCTTGAAAAGAAATCTGTGTCCTGTTGCTTCTGTTaGAGTTTTTCAAACTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: PTLEKPSSQPFPLEKKSVSCCFC*SFSNSS Trigger: CGAAGAGTTTGAAAAACTCAAACAGAAGCAACAGGA...CACAGATTTCTTTTCAAGAGGAAAGGGTTGGCTTGAGGGTTTTTCAAGGGTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | AGGCTCCTCTGCAAAGGCAGTACTTTGACCATGAACATCTCTAGTTGTGGTTATTCCTGTTGCTTCTGTTaGAGTTTTTCAAACTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: RLLCKGSTLTMNISSCGYSCCFC*SFSNSS Trigger: CGAAGAGTTTGAAAAACTCAAACAGAAGCAACAGGA...ATAACCACAACTAGAGATGTTCATGGTCAAAGTACTGCCTTTGCAGAGGAGCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | ACTGGGATATTGGAAAACATAAATATAAACAGAGCGATTAGCCCTCTCCAACTGGGAGCAGGTGACTTGTaGCCATCTGGTGATTTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: TGILENININRAISPLQLGAGDL*PSGDLV Trigger: AACTAAATCACCAGATGGCAACAAGTCACCTGCTCC...CAGTTGGAGAGGGCTAATCGCTCTGTTTATATTTATGTTTTCCAATATCCCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | TACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGACCTTATCCACAGATaGCTTTTCCCAGAGGTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: YCIHSSDNLKLSFLLLTSDLIHR*LFPEVP Trigger: CGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTC...GGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 |
||
| CDS-3UTR CAA 90 bp | GATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTCTGCTGTTTCTGTCTTaGCTCTTCTATCCTTGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: DNLKLSFLLLTSDVVGVTLLFLS*LFYPCL Trigger: AAGGCAAGGATAGAAGAGCAAAGACAGAAACAGCAG...AGTGACACCAACCACATCGGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115027.8 |
||
| CDS-3UTR CAA 90 bp | CATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGATGTGGTTCTATCCAAGAAGCTCTaGACTTCTTCTTTGGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HSSDNLKLSFLLLTSDVVLSKKL*TSSLGS Trigger: AGAGCCCAAAGAAGAAGTCAAGAGCTTCTTGGATAG...AACCACATCGGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATCTGAGGAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | GTCGTTTCGCCCCTAGATACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCGGTTTGTTTAAGTTaGTGGGTCATGAATTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VVSPLDTAYIPQIILSSVSVCLS*WVMNSP Trigger: TGGAGAATTCATGACCCACAAACTTAAACAAACCGA...AACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTATCTAGGGGCGAAACGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCTTTTGTTGACTTCCGATGTGGTTGGTGTCACTGTTCATATGACAGTAGCGAAAGCATTCTCGGTTaGTTTAAGTTTGTGGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: FPFVDFRCGWCHCSYDSSESILG*FKFVGH Trigger: ATGACCCACAAACTTAAACAAACCGAGAATGCTTTC...GCTACTGTCATATGAACAGTGACACCAACCACATCGGAAGTCAACAAAAGGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | ACAATGGCAGATTCACAGAACATGCTAGTCAGCTTGCAGTTTCCTCTCTTAAAGGAAAGCATTCTCGGTTaGTTTAAGTTTGTGGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: TMADSQNMLVSLQFPLLKESILG*FKFVGH Trigger: ATGACCCACAAACTTAAACAAACCGAGAATGCTTTC...CTTTAAGAGAGGAAACTGCAAGCTGACTAGCATGTTCTGTGAATCTGCCATTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | TACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGGAGCAGGTGACTTGTaGCCATCTGGTGATTTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: YCIHSSDNLKLSFLLLTSGAGDL*PSGDLV Trigger: AACTAAATCACCAGATGGCAACAAGTCACCTGCTCC...GGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | GCTTCTTCAAAGGTTAAATCCAAACGGAGAAAAATCTACCCTAAAACTCATCGTGATTCTTTCTTGTTCTaGTCCCTCCACTTCCAACCT | + |
|
Preference number: 5 (lower is better) Translates to: ASSKVKSKRRKIYPKTHRDSFLF*SLHFQP Trigger: AGGTTGGAAGTGGAGGGACAAGAACAAGAAAGAATC...ACGATGAGTTTTAGGGTAGATTTTTCTCCGTTTGGATTTAACCTTTGAAGAAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115027.8 |
||
| CDS-3UTR CAA 90 bp | GCTTCTTCAAAGGTTAAATCCAAACGGAGAAAAATCTACCCTAAAACTCATCGTCTTTTGTCTTTGAGCTaGCCCTTTAACTCCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ASSKVKSKRRKIYPKTHRLLSLS*PFNSFL Trigger: GAGAAAGGAGTTAAAGGGCAAGCTCAAAGACAAAAG...ACGATGAGTTTTAGGGTAGATTTTTCTCCGTTTGGATTTAACCTTTGAAGAAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115027.8 |
||
| CDS-3UTR CAA 90 bp | CATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCGATGTGGTTTCCTGTTGCTTCTGTTaGAGTTTTTCAAACTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: HSSDNLKLSFLLLTSDVVSCCFC*SFSNSS Trigger: CGAAGAGTTTGAAAAACTCAAACAGAAGCAACAGGA...AACCACATCGGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATCTGAGGAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS-3UTR CAA 90 bp | TACTGCATACATTCCTCAGATAATCTTAAGCTCAGTTTCCTTTTGTTGACTTCCTCGGTTTGTTTAAGTTaGTGGGTCATGAATTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: YCIHSSDNLKLSFLLLTSSVCLS*WVMNSP Trigger: TGGAGAATTCATGACCCACAAACTTAAACAAACCGA...GGAAGTCAACAAAAGGAAACTGAGCTTAAGATTATCTGAGGAATGTATGCAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS GCA 72 bp | AAGGATTCTTCCTCTTGCTTCTGCCGCAGCCTTTCCTaGCGGGCCCGGCGGCGCCGTTCCCTGGCAGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: KDSSSCFCRSLS*RARRRRSLAAS Trigger: AGAGGCTGCCAGGGAACGGCGCCGCCGGGCCCGGCAGGAAAGGCTGCGGCAGAAGCAAGAGGAAGAATCCTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000142512.8 ENSMUST00000149009.8 |
||
| CDS GCA 72 bp | TCTGTCACCTGTCCCAAGGATTCTTCCTCTTGCTTCTaGCGCAGCCTTTCCTGCCGGGCCCGGCGGCGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: SVTCPKDSSSCF*RSLSCRARRRR Trigger: ACGGCGCCGCCGGGCCCGGCAGGAAAGGCTGCGGCAGAAGCAAGAGGAAGAATCCTTGGGACAGGTGACAGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000142512.8 ENSMUST00000149009.8 |
||
| CDS GCA 72 bp | ACCTGGTCTGTCACCTGTCCCAAGGATTCTTCCTCTTaGTTCTGCCGCAGCCTTTCCTGCCGGGCCCGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: TWSVTCPKDSSS*FCRSLSCRARR Trigger: CCGCCGGGCCCGGCAGGAAAGGCTGCGGCAGAAGCAAGAGGAAGAATCCTTGGGACAGGTGACAGACCAGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000142512.8 ENSMUST00000149009.8 |
||
| CDS CAA 90 bp | TCCAGCCTCTTGCCGGCTTCCACTTGTGGGGCACCTTCAGCTTCCTaGTCCCCACTGGCCCGGCCTCCTGAACGGCTGAAAGCATTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: SSLLPASTCGAPSAS*SPLARPPERLKAFS Trigger: CGAGAATGCTTTCAGCCGTTCAGGAGGCCGGGCCAGTGGGGACAAGGAAGCTGAAGGTGCCCCACAAGTGGAAGCCGGCAAGAGGCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS CAA 90 bp | GAGGGGGCTGAGAACACGCTCCCCTTCTCCCACATGCTCTTGATATaGCGGACGCCCTCGGCAGGAACAGGGAGATCCGATGCTGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: EGAENTLPFSHMLLI*RTPSAGTGRSDAAG Trigger: GCCAGCAGCATCGGATCTCCCTGTTCCTGCCGAGGGCGTCCGCAATATCAAGAGCATGTGGGAGAAGGGGAGCGTGTTCTCAGCCCCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS CAA 90 bp | GAGGCAGAGGGGGCTGAGAACACGCTCCCCTTCTCCCACATGCTCTaGATATTGCGGACGCCCTCGGCAGGAACAGGGAGATCCGATGCT | + |
|
Preference number: 6 (lower is better) Translates to: EAEGAENTLPFSHML*ILRTPSAGTGRSDA Trigger: AGCATCGGATCTCCCTGTTCCTGCCGAGGGCGTCCGCAATATCAAGAGCATGTGGGAGAAGGGGAGCGTGTTCTCAGCCCCCTCTGCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS CAA 72 bp | GGGGCTGAGAACACGCTCCCCTTCTCCCACATGCTCTaGATATTGCGGACGCCCTCGGCAGGAACAGGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: GAENTLPFSHML*ILRTPSAGTGR Trigger: TCTCCCTGTTCCTGCCGAGGGCGTCCGCAATATCAAGAGCATGTGGGAGAAGGGGAGCGTGTTCTCAGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS TCA 72 bp | GGGCTGAGAACACGCTCCCCTTCTCCCACATGCTCTTaGTATTGCGGACGCCCTCGGCAGGAACAGGGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: GLRTRSPSPTCS*YCGRPRQEQGD Trigger: ATCTCCCTGTTCCTGCCGAGGGCGTCCGCAATATCAAGAGCATGTGGGAGAAGGGGAGCGTGTTCTCAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS GCA 72 bp | GCGGACGCCCTCGGCAGGAACAGGGAGATCCGATGCTaGTGGCTTCATAGGTTTCGAAGCCTTTGTTCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: ADALGRNREIRC*WLHRFRSLCSL Trigger: GAGGGAACAAAGGCTTCGAAACCTATGAAGCCAGCAGCATCGGATCTCCCTGTTCCTGCCGAGGGCGTCCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS TCA 72 bp | ACCTTCAGCTTCCTTGTCCCCACTGGCCCGGCCTCCTaGACGGCTGGGGCTGAAAGCATTCTCGGTTTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: TFSFLVPTGPAS*TAGAESILGLF Trigger: AAACAAACCGAGAATGCTTTCAGCCCCAGCCGTTCAGGAGGCCGGGCCAGTGGGGACAAGGAAGCTGAAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000123823.8 ENSMUST00000126181.8 ENSMUST00000136907.8 ENSMUST00000142716.3 |
||
| CDS CAA 90 bp | TTAATGCGGCTGGAAACTCCCACCTTCAGGCCAGCAGTTTCCTTATaGGGTGTTCCTGAGGCAGAGGGGGCTGAGAACACGCTCCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LMRLETPTFRPAVSL*GVPEAEGAENTLPF Trigger: GAAGGGGAGCGTGTTCTCAGCCCCCTCTGCCTCAGGAACACCCAATAAGGAAACTGCTGGCCTGAAGGTGGGAGTTTCCAGCCGCATTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS CCA 72 bp | GGCTTAGACTCTTCATCGGGGACACTGTTCTGGACATaGGCCTCCACCTGGTCTGTCACCTGTCCCAAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: GLDSSSGTLFWT*ASTWSVTCPKD Trigger: ATCCTTGGGACAGGTGACAGACCAGGTGGAGGCCCATGTCCAGAACAGTGTCCCCGATGAAGAGTCTAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000142512.8 ENSMUST00000149009.8 |
||
| CDS CAA 72 bp | CTGGAAACTCCCACCTTCAGGCCAGCAGTTTCCTTATaGGGTGTTCCTGAGGCAGAGGGGGCTGAGAACACG | + |
|
Preference number: 6 (lower is better) Translates to: LETPTFRPAVSL*GVPEAEGAENT Trigger: CGTGTTCTCAGCCCCCTCTGCCTCAGGAACACCCAATAAGGAAACTGCTGGCCTGAAGGTGGGAGTTTCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS CAA 72 bp | TCTCCTCGGCAGCGGCTTTCTGTTCTGCTTCGACTCTaGCCCGTTCCTCTGCTAGCTTTCTGTCCTGCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: SPRQRLSVLLRL*PVPLLAFCPAQ Trigger: CTGAGCAGGACAGAAAGCTAGCAGAGGAACGGGCAAGAGTCGAAGCAGAACAGAAAGCCGCTGCCGAGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115027.8 ENSMUST00000136907.8 |
||
| CDS CAA 90 bp | GGGGAAGTGACCTTATCCACAGATTGCTTTTCCCAGAGGTTCCGCTaGCCAGATACATCTCCTGGCCTCAAGTCAGAAGGCTTGGGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GEVTLSTDCFSQRFR*PDTSPGLKSEGLGA Trigger: TGCTCCCAAGCCTTCTGACTTGAGGCCAGGAGATGTATCTGGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGTCACTTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 |
||
| CDS TCA 72 bp | ACCTTCAGCTTCCTTGTCCCCACTGGCCCGGCCTCCTaGACGGCTGAAAGCATTCTCGGTTTGTTTAAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: TFSFLVPTGPAS*TAESILGLFKF Trigger: AAACTTAAACAAACCGAGAATGCTTTCAGCCGTTCAGGAGGCCGGGCCAGTGGGGACAAGGAAGCTGAAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS TCA 72 bp | TTTAGGAGTGAAGCACTTGAACGGCTTCTTGTCCTCTaGCAGGCCATCCTCTGGCATCTTCTGGCGCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: FRSEALERLLVL*QAILWHLLALL Trigger: GAGAAGCGCCAGAAGATGCCAGAGGATGGCCTGTCAGAGGACAAGAAGCCGTTCAAGTGCTTCACTCCTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000142716.3 ENSMUST00000149009.8 |
||
| CDS TCA 72 bp | CCTTTCTCTTCTTCCTGCGTCTTTGGGACAGCTGTCTaGAGTCTGTCGTCTGGGGCCTCCCTTTCATTCACT | + |
|
Preference number: 6 (lower is better) Translates to: PFSSSCVFGTAV*SLSSGASLSFT Trigger: AGTGAATGAAAGGGAGGCCCCAGACGACAGACTTCAGACAGCTGTCCCAAAGACGCAGGAAGAAGAGAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115027.8 |
||
| CDS GCA 72 bp | CTGCTCCAGCCGGCTGTCAATCTTGGAGACTACTGCTaGTTGGTGAGTAGATCTGACACCACTTTTCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: LLQPAVNLGDYC*LVSRSDTTFLH Trigger: GTGCAGAAAAGTGGTGTCAGATCTACTCACCAAGCAGCAGTAGTCTCCAAGATTGACAGCCGGCTGGAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
||
| CDS GCA 72 bp | TTGTTCTTGTCCCTCCACTTCCAACCTCAGTCTCTCTaGCTCAGCTCTCTCTCTCTCTTCCTCCCCCATCTT | + |
|
Preference number: 6 (lower is better) Translates to: LFLSLHFQPQSL*LSSLSLFLPHL Trigger: AAGATGGGGGAGGAAGAGAGAGAGAGAGCTGAGGCAGAGAGACTGAGGTTGGAAGTGGAGGGACAAGAACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115027.8 ENSMUST00000136907.8 |
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| CDS CAA 90 bp | ATCTTGAGAGACGAGCCTTTAGGAGTGAAGCACTTGAACGGCTTCTaGTCCTCTGACAGGCCATCCTCTGGCATCTTCTGGCGCTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: ILRDEPLGVKHLNGF*SSDRPSSGIFWRFS Trigger: TGAGAAGCGCCAGAAGATGCCAGAGGATGGCCTGTCAGAGGACAAGAAGCCGTTCAAGTGCTTCACTCCTAAAGGCTCGTCTCTCAAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000142716.3 ENSMUST00000149009.8 |
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| CDS CAA 90 bp | GCTCGTTCCTCTATCTTGAGAGACGAGCCTTTAGGAGTGAAGCACTaGAACGGCTTCTTGTCCTCTGACAGGCCATCCTCTGGCATCTTC | + |
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Preference number: 6 (lower is better) Translates to: ARSSILRDEPLGVKH*NGFLSSDRPSSGIF Trigger: GAAGATGCCAGAGGATGGCCTGTCAGAGGACAAGAAGCCGTTCAAGTGCTTCACTCCTAAAGGCTCGTCTCTCAAGATAGAGGAACGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000142716.3 ENSMUST00000149009.8 |
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| CDS CAA 90 bp | CCTCTGCTGTCTCATTTTCGGCGGAGTCATTTTGCATTCTTCGGCTaGGGCCTGAGAGACTGCCATCTGTTATGGTCGGATCAAACTCCT | + |
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Preference number: 6 (lower is better) Translates to: PLLSHFRRSHFAFFG*GLRDCHLLWSDQTP Trigger: AGGAGTTTGATCCGACCATAACAGATGGCAGTCTCTCAGGCCCAAGCCGAAGAATGCAAAATGACTCCGCCGAAAATGAGACAGCAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000142512.8 ENSMUST00000149009.8 |
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| CDS TCA 72 bp | TTCGGCGGAGTCATTTTGCATTCTTCGGCTTGGGCCTaGGAGACTGCCATCTGTTATGGTCGGATCAAACTC | + |
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Preference number: 6 (lower is better) Translates to: FGGVILHSSAWA*ETAICYGRIKL Trigger: GAGTTTGATCCGACCATAACAGATGGCAGTCTCTCAGGCCCAAGCCGAAGAATGCAAAATGACTCCGCCGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000142512.8 ENSMUST00000149009.8 |
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| CDS TCA 72 bp | TCTTCTTCCTTTTCCTGCGTCTTTGGGACAGCTGTCTaGAGTCTGTCGTCTGGGGCCTCCCTTTCATTCACT | + |
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Preference number: 6 (lower is better) Translates to: SSSFSCVFGTAV*SLSSGASLSFT Trigger: AGTGAATGAAAGGGAGGCCCCAGACGACAGACTTCAGACAGCTGTCCCAAAGACGCAGGAAAAGGAAGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136907.8 |
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| CDS GCA 72 bp | GTACTGCTCCAGCCGGCTGTCAATCTTGGAGACTACTaGTGCTTGGTGAGTAGATCTGACACCACTTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: VLLQPAVNLGDY*CLVSRSDTTFL Trigger: CAGAAAAGTGGTGTCAGATCTACTCACCAAGCAGCAGTAGTCTCCAAGATTGACAGCCGGCTGGAGCAGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| CDS CAA 72 bp | CTCTTCTTCGTCATCATCATTTCTCTGATAGGCAATTaGAGAGAGTGTGGCCAGGCAGCGCCTTCCCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: LFFVIIISLIGN*RECGQAAPSLG Trigger: TCCCAGGGAAGGCGCTGCCTGGCCACACTCTCTCAAATTGCCTATCAGAGAAATGATGATGACGAAGAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031775.13 ENSMUST00000115021.8 ENSMUST00000149009.8 |
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| CDS CAA 72 bp | ACCTTATCCACAGATTGCTTTTCCCAGAGGTTCCGCTaGCCAGATACATCTCCTGGCCTCAAGTCAGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: TLSTDCFSQRFR*PDTSPGLKSEG Trigger: GCCTTCTGACTTGAGGCCAGGAGATGTATCTGGCAAGCGGAACCTCTGGGAAAAGCAATCTGTGGATAAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 |
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| CDS CAA 90 bp | ACATCTCCTGGCCTCAAGTCAGAAGGCTTGGGAGCAGGTGACTTGTaGCCATCTGGTGATTTAGTTAGCCATTCGTTAATGCGGCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: TSPGLKSEGLGAGDL*PSGDLVSHSLMRLE Trigger: TTCCAGCCGCATTAACGAATGGCTAACTAAATCACCAGATGGCAACAAGTCACCTGCTCCCAAGCCTTCTGACTTGAGGCCAGGAGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 |
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| CDS CAA 90 bp | GATACATCTCCTGGCCTCAAGTCAGAAGGCTTGGGAGCAGGTGACTaGTTGCCATCTGGTGATTTAGTTAGCCATTCGTTAATGCGGCTG | + |
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Preference number: 6 (lower is better) Translates to: DTSPGLKSEGLGAGD*LPSGDLVSHSLMRL Trigger: CAGCCGCATTAACGAATGGCTAACTAAATCACCAGATGGCAACAAGTCACCTGCTCCCAAGCCTTCTGACTTGAGGCCAGGAGATGTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 |
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| CDS CAA 90 bp | CTTTCTGAAGGCAGGCTTGTCATCCCGAGGCTTTTGTCTTTGAGCTaGCCCTTTAACTCCTTTCTCTTCTTCCTGCGTCTTTGGGACAGC | + |
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Preference number: 6 (lower is better) Translates to: LSEGRLVIPRLLSLS*PFNSFLFFLRLWDS Trigger: GCTGTCCCAAAGACGCAGGAAGAAGAGAAAGGAGTTAAAGGGCAAGCTCAAAGACAAAAGCCTCGGGATGACAAGCCTGCCTTCAGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115027.8 |
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| CDS TCA 72 bp | TTCTCATCTTTGATCTGCGTCTTTGGGACAGCTGTCTaGAGTCTGTCGTCTGGGGCCTCCCTTTCATTCACT | + |
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Preference number: 6 (lower is better) Translates to: FSSLICVFGTAV*SLSSGASLSFT Trigger: AGTGAATGAAAGGGAGGCCCCAGACGACAGACTTCAGACAGCTGTCCCAAAGACGCAGATCAAAGATGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142716.3 |
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| CDS GCA 72 bp | TGGCTTCATAGGTTTCGAAGCCTTTGTTCCCTCGATTaGATTGGTGTACTGCTCCAGCCGGCTGTCAATCTT | + |
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Preference number: 6 (lower is better) Translates to: WLHRFRSLCSLD*IGVLLQPAVNL Trigger: AAGATTGACAGCCGGCTGGAGCAGTACACCAATGCAATCGAGGGAACAAAGGCTTCGAAACCTATGAAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| CDS GCA 72 bp | TCGACTCTTGCCCGTTCCTCTGCTAGCTTTCTGTCCTaGTCAGCTTTGATTCTTTCTTGTTCTTGTCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: STLARSSASFLS*SALILSCSCPS Trigger: GGAGGGACAAGAACAAGAAAGAATCAAAGCTGAGCAGGACAGAAAGCTAGCAGAGGAACGGGCAAGAGTCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115027.8 ENSMUST00000136907.8 |
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| CDS CAA 72 bp | TCTCATTTTCGGCGGAGTCATTTTGCATTCTTCGGCTaGGGCCTGAGAGACTGCCATCTGTTATGGTCGGAT | + |
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Preference number: 6 (lower is better) Translates to: SHFRRSHFAFFG*GLRDCHLLWSD Trigger: ATCCGACCATAACAGATGGCAGTCTCTCAGGCCCAAGCCGAAGAATGCAAAATGACTCCGCCGAAAATGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000142512.8 ENSMUST00000149009.8 |
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| CDS CAA 72 bp | TCTATCTTGAGAGACGAGCCTTTAGGAGTGAAGCACTaGAACGGCTTCTTGTCCTCTGACAGGCCATCCTCT | + |
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Preference number: 6 (lower is better) Translates to: SILRDEPLGVKH*NGFLSSDRPSS Trigger: AGAGGATGGCCTGTCAGAGGACAAGAAGCCGTTCAAGTGCTTCACTCCTAAAGGCTCGTCTCTCAAGATAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 ENSMUST00000142716.3 ENSMUST00000149009.8 |
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| CDS CAA 72 bp | CCTGGCCTCAAGTCAGAAGGCTTGGGAGCAGGTGACTaGTTGCCATCTGGTGATTTAGTTAGCCATTCGTTA | + |
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Preference number: 6 (lower is better) Translates to: PGLKSEGLGAGD*LPSGDLVSHSL Trigger: TAACGAATGGCTAACTAAATCACCAGATGGCAACAAGTCACCTGCTCCCAAGCCTTCTGACTTGAGGCCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 |
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| CDS CAA 72 bp | GGCAGGCTTGTCATCCCGAGGCTTTTGTCTTTGAGCTaGCCCTTTAACTCCTTTCTCTTCTTCCTGCGTCTT | + |
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Preference number: 6 (lower is better) Translates to: GRLVIPRLLSLS*PFNSFLFFLRL Trigger: AAGACGCAGGAAGAAGAGAAAGGAGTTAAAGGGCAAGCTCAAAGACAAAAGCCTCGGGATGACAAGCCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115027.8 |
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| CDS CAA 72 bp | GGCCTCAAGTCAGAAGGCTTGGGAGCAGGTGACTTGTaGCCATCTGGTGATTTAGTTAGCCATTCGTTAATG | + |
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Preference number: 6 (lower is better) Translates to: GLKSEGLGAGDL*PSGDLVSHSLM Trigger: CATTAACGAATGGCTAACTAAATCACCAGATGGCAACAAGTCACCTGCTCCCAAGCCTTCTGACTTGAGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000115027.8 |
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| CDS CAA 72 bp | CTGCCCGTTTTCCAATACCATCAGCACAGCCTCCTCTaGGATTTCTGGTGTTTTCTCCTCTACCATCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: LPVFQYHQHSLL*DFWCFLLYHLL Trigger: GAGAAGATGGTAGAGGAGAAAACACCAGAAATCCAAGAGGAGGCTGTGCTGATGGTATTGGAAAACGGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115027.8 ENSMUST00000123823.8 ENSMUST00000136907.8 |
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| CDS CAA 72 bp | CGGCTGGGGCTGAAAGCATTCTCGGTTTGTTTAAGTTaGTGGGTCATGAATTCTCCATTCTGCGCCTTCACT | + |
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Preference number: 6 (lower is better) Translates to: RLGLKAFSVCLS*WVMNSPFCAFT Trigger: AGTGAAGGCGCAGAATGGAGAATTCATGACCCACAAACTTAAACAAACCGAGAATGCTTTCAGCCCCAGCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000123823.8 ENSMUST00000126181.8 ENSMUST00000136907.8 ENSMUST00000142716.3 |
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| CDS CAA 90 bp | CTCTTCCTTTCTGAAGGCAGGCTTGTCATCCCGAGGCTTTTGTCTTaGAGCTTGCCCTTTAACTCCTTTCTCTTCTTCCTGATTTTCGCC | + |
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Preference number: 6 (lower is better) Translates to: LFLSEGRLVIPRLLS*SLPFNSFLFFLIFA Trigger: GGCGAAAATCAGGAAGAAGAGAAAGGAGTTAAAGGGCAAGCTCAAAGACAAAAGCCTCGGGATGACAAGCCTGCCTTCAGAAAGGAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031775.13 |
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| CDS CAA 90 bp | GCCCGGCCTCCTGAACGGCTGAAAGCATTCTCGGTTTGTTTAAGTTaGTGGGTCATGAATTCTCCATTCTGCGCCTTCACTTCTGTAAAT | + |
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Preference number: 6 (lower is better) Translates to: ARPPERLKAFSVCLS*WVMNSPFCAFTSVN Trigger: ATTTACAGAAGTGAAGGCGCAGAATGGAGAATTCATGACCCACAAACTTAAACAAACCGAGAATGCTTTCAGCCGTTCAGGAGGCCGGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| CDS CAA 90 bp | CTCTTCCTTTCTGAAGGCAGGCTTGTCATCCCGAGGCTTTTGTCTTaGAGCTTGCCCTTTAACTCCTTTCTCTTCTTCCTTTTCCTGCGT | + |
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Preference number: 6 (lower is better) Translates to: LFLSEGRLVIPRLLS*SLPFNSFLFFLFLR Trigger: ACGCAGGAAAAGGAAGAAGAGAAAGGAGTTAAAGGGCAAGCTCAAAGACAAAAGCCTCGGGATGACAAGCCTGCCTTCAGAAAGGAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136907.8 |
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| CDS CAA 90 bp | CCTCCTGAACGGCTGGGGCTGAAAGCATTCTCGGTTTGTTTAAGTTaGTGGGTCATGAATTCTCCATTCTGCGCCTTCACTTCTGTAAAT | + |
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Preference number: 6 (lower is better) Translates to: PPERLGLKAFSVCLS*WVMNSPFCAFTSVN Trigger: ATTTACAGAAGTGAAGGCGCAGAATGGAGAATTCATGACCCACAAACTTAAACAAACCGAGAATGCTTTCAGCCCCAGCCGTTCAGGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000123823.8 ENSMUST00000126181.8 ENSMUST00000136907.8 ENSMUST00000142716.3 |
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| CDS CAA 72 bp | GGCAGGCTTGTCATCCCGAGGCTTTTGTCTTTGAGCTaGCCCTTTAACTCCTTTCTCTTCTTCCTGATTTTC | + |
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Preference number: 6 (lower is better) Translates to: GRLVIPRLLSLS*PFNSFLFFLIF Trigger: GAAAATCAGGAAGAAGAGAAAGGAGTTAAAGGGCAAGCTCAAAGACAAAAGCCTCGGGATGACAAGCCTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031775.13 |
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| CDS CAA 72 bp | TTCCTTTCTGAAGGCAGGCTTGTCATCCCGAGGCTTTaGTCTTTGAGCTTGCCCTTTAACTCCTTTCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: FLSEGRLVIPRL*SLSLPFNSFLF Trigger: GAAGAGAAAGGAGTTAAAGGGCAAGCTCAAAGACAAAAGCCTCGGGATGACAAGCCTGCCTTCAGAAAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031775.13 ENSMUST00000115027.8 ENSMUST00000123823.8 ENSMUST00000126181.8 ENSMUST00000136907.8 |
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| CDS CAA 90 bp | CTCTTCCTTTCTGAAGGCAGGCTTGTCATCCCGAGGCTTTTGTCTTaGAGCTTGCCCTTTAACTCCTTTCTCTTCTTCCTTTTCCTGATT | + |
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Preference number: 6 (lower is better) Translates to: LFLSEGRLVIPRLLS*SLPFNSFLFFLFLI Trigger: AATCAGGAAAAGGAAGAAGAGAAAGGAGTTAAAGGGCAAGCTCAAAGACAAAAGCCTCGGGATGACAAGCCTGCCTTCAGAAAGGAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126181.8 |
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| CDS CCA 72 bp | CTGGGGCTGAAAGCATTCTCGGTTTGTTTAAGTTTGTaGGTCATGAATTCTCCATTCTGCGCCTTCACTTCT | + |
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Preference number: 6 (lower is better) Translates to: LGLKAFSVCLSL*VMNSPFCAFTS Trigger: AGAAGTGAAGGCGCAGAATGGAGAATTCATGACCCACAAACTTAAACAAACCGAGAATGCTTTCAGCCCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000115021.8 ENSMUST00000115026.8 ENSMUST00000123823.8 ENSMUST00000126181.8 ENSMUST00000136907.8 ENSMUST00000142716.3 |
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| CDS CAA 72 bp | CCTGAACGGCTGAAAGCATTCTCGGTTTGTTTAAGTTaGTGGGTCATGAATTCTCCATTCTGCGCCTTCACT | + |
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Preference number: 6 (lower is better) Translates to: PERLKAFSVCLS*WVMNSPFCAFT Trigger: AGTGAAGGCGCAGAATGGAGAATTCATGACCCACAAACTTAAACAAACCGAGAATGCTTTCAGCCGTTCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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| CDS CAA 90 bp | TTTGATCTCTTCCTTTCTGAAGGCAGGCTTGTCATCCCGAGGCTTTaGTCTTTGAGCTTGCCCTTTAACTCCTTTCTCTTCTTCCTGATT | + |
|
Preference number: 6 (lower is better) Translates to: FDLFLSEGRLVIPRL*SLSLPFNSFLFFLI Trigger: AATCAGGAAGAAGAGAAAGGAGTTAAAGGGCAAGCTCAAAGACAAAAGCCTCGGGATGACAAGCCTGCCTTCAGAAAGGAAGAGATCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031775.13 |
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| CDS CAA 90 bp | TTTGATCTCTTCCTTTCTGAAGGCAGGCTTGTCATCCCGAGGCTTTaGTCTTTGAGCTTGCCCTTTAACTCCTTTCTCTTCTTCCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: FDLFLSEGRLVIPRL*SLSLPFNSFLFFLF Trigger: GAAAAGGAAGAAGAGAAAGGAGTTAAAGGGCAAGCTCAAAGACAAAAGCCTCGGGATGACAAGCCTGCCTTCAGAAAGGAAGAGATCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123823.8 ENSMUST00000126181.8 ENSMUST00000136907.8 |
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| CDS CCA 72 bp | GAACGGCTGAAAGCATTCTCGGTTTGTTTAAGTTTGTaGGTCATGAATTCTCCATTCTGCGCCTTCACTTCT | + |
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Preference number: 6 (lower is better) Translates to: ERLKAFSVCLSL*VMNSPFCAFTS Trigger: AGAAGTGAAGGCGCAGAATGGAGAATTCATGACCCACAAACTTAAACAAACCGAGAATGCTTTCAGCCGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031775.13 ENSMUST00000079391.10 ENSMUST00000115027.8 ENSMUST00000149009.8 |
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