Pregenerated sensors for BPNT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066324Ensembl transcript IDs: ENSMUST00000084949.3
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAAAAGCACTTGTGCTGCATTAAGATTCAGTCCCCTGCTGAGGAGTaGCAGGCTTTGGGCTCTATGACATGCAAACCTAAAGTATGCACA | + |
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Preference number: 1 (lower is better) Translates to: EKHLCCIKIQSPAEE*QALGSMTCKPKVCT Trigger: TGTGCATACTTTAGGTTTGCATGTCATAGAGCCCAAAGCCTGGCACTCCTCAGCAGGGGACTGAATCTTAATGCAGCACAAGTGCTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR GCA 90 bp | ATTCAGTCCCCTGCTGAGGAGTGCCAGGCTTTGGGCTCTATGACATaGAAACCTAAAGTATGCACAATATACCAGACTAGAATGTCCATC | + |
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Preference number: 1 (lower is better) Translates to: IQSPAEECQALGSMT*KPKVCTIYQTRMSI Trigger: GATGGACATTCTAGTCTGGTATATTGTGCATACTTTAGGTTTGCATGTCATAGAGCCCAAAGCCTGGCACTCCTCAGCAGGGGACTGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR CCA 90 bp | ACTCAACACACAGTCTGGACTGAGTTTGTGCAAGACTCTAGGTACTaGGGATATGGTGAAAACGCACACACAAAACCAGACATCCTCCAT | + |
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Preference number: 1 (lower is better) Translates to: TQHTVWTEFVQDSRY*GYGENAHTKPDILH Trigger: ATGGAGGATGTCTGGTTTTGTGTGTGCGTTTTCACCATATCCCCAGTACCTAGAGTCTTGCACAAACTCAGTCCAGACTGTGTGTTGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR TCA 90 bp | GGAAGGCCATCAGCTATGATCAAGAAAGTTAAAATGGTTGGCACTTaGCTGTACTTCTGCCTGAGTTACCTGAGCACTGCCATCATAGGT | + |
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Preference number: 1 (lower is better) Translates to: GRPSAMIKKVKMVGT*LYFCLSYLSTAIIG Trigger: ACCTATGATGGCAGTGCTCAGGTAACTCAGGCAGAAGTACAGTCAAGTGCCAACCATTTTAACTTTCTTGATCATAGCTGATGGCCTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR TCA 90 bp | TTAAGATTCAGTCCCCTGCTGAGGAGTGCCAGGCTTTGGGCTCTATaGCATGCAAACCTAAAGTATGCACAATATACCAGACTAGAATGT | + |
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Preference number: 1 (lower is better) Translates to: LRFSPLLRSARLWAL*HANLKYAQYTRLEC Trigger: ACATTCTAGTCTGGTATATTGTGCATACTTTAGGTTTGCATGTCATAGAGCCCAAAGCCTGGCACTCCTCAGCAGGGGACTGAATCTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR CCA 90 bp | AATCTGGTGAAGTGGGTTGGCAGGTCAGAGCCTGTTAAGAAAATGTaGCATCTCTGCCAAAGGAAAACAGCTTATTTCTTCCATGGCTTT | + |
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Preference number: 1 (lower is better) Translates to: NLVKWVGRSEPVKKM*HLCQRKTAYFFHGF Trigger: AAAGCCATGGAAGAAATAAGCTGTTTTCCTTTGGCAGAGATGCCACATTTTCTTAACAGGCTCTGACCTGCCAACCCACTTCACCAGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR GCA 90 bp | GAGGAGTGCCAGGCTTTGGGCTCTATGACATGCAAACCTAAAGTATaGACAATATACCAGACTAGAATGTCCATCCTTTGCTCAATTTTA | + |
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Preference number: 1 (lower is better) Translates to: EECQALGSMTCKPKV*TIYQTRMSILCSIL Trigger: TAAAATTGAGCAAAGGATGGACATTCTAGTCTGGTATATTGTGCATACTTTAGGTTTGCATGTCATAGAGCCCAAAGCCTGGCACTCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR GCA 90 bp | ATTTCCCTGATTTTGTATCCTATTACAGGGAAAGTAAGTCTCTGCTaGTTCATAAGTACTTCCAAAGTACTTCAGGGCGGCCTTAACCAT | + |
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Preference number: 1 (lower is better) Translates to: ISLILYPITGKVSLC*FISTSKVLQGGLNH Trigger: ATGGTTAAGGCCGCCCTGAAGTACTTTGGAAGTACTTATGAAGCAGCAGAGACTTACTTTCCCTGTAATAGGATACAAAATCAGGGAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR GCA 90 bp | CTAATTTCCCTGATTTTGTATCCTATTACAGGGAAAGTAAGTCTCTaGTGCTTCATAAGTACTTCCAAAGTACTTCAGGGCGGCCTTAAC | + |
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Preference number: 1 (lower is better) Translates to: LISLILYPITGKVSL*CFISTSKVLQGGLN Trigger: GTTAAGGCCGCCCTGAAGTACTTTGGAAGTACTTATGAAGCAGCAGAGACTTACTTTCCCTGTAATAGGATACAAAATCAGGGAAATTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR GCA 90 bp | AACCTTCCCTTTCTCAAATCCCATTCTATATGGAAGTATCAACAATaGAGACTCATCATTTGTTGTGTGAAAATGGTGACTCATAACAGT | + |
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Preference number: 1 (lower is better) Translates to: NLPFLKSHSIWKYQQ*RLIICCVKMVTHNS Trigger: ACTGTTATGAGTCACCATTTTCACACAACAAATGATGAGTCTGCATTGTTGATACTTCCATATAGAATGGGATTTGAGAAAGGGAAGGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR-3UTR TCA 90 bp | GGGTTGGCAGGTCAGAGCCTGTTAAGAAAATGTGGCATCTCTGCCAAAGGAAAAGATTCAGTCCCCTGCTaGGGAGTGCCAGGCTTTGGG | + |
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Preference number: 2 (lower is better) Translates to: GLAGQSLLRKCGISAKGKDSVPC*GVPGFG Trigger: CCCAAAGCCTGGCACTCCTCAGCAGGGGACTGAATC...TTTTCCTTTGGCAGAGATGCCACATTTTCTTAACAGGCTCTGACCTGCCAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR CAA 90 bp | CCACCACTGGTAGTTGCAGCTAGAATAATCTCAAGAGTTCTTGCTTaGACCTTCCAGGTTGTCCCAGGAAGGCCATCAGCTATGATCAAG | + |
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Preference number: 2 (lower is better) Translates to: PPLVVAARIISRVLA*TFQVVPGRPSAMIK Trigger: CTTGATCATAGCTGATGGCCTTCCTGGGACAACCTGGAAGGTCAAAGCAAGAACTCTTGAGATTATTCTAGCTGCAACTACCAGTGGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR CAA 90 bp | TTGTGCTGCATTAAGATTCAGTCCCCTGCTGAGGAGTGCCAGGCTTaGGGCTCTATGACATGCAAACCTAAAGTATGCACAATATACCAG | + |
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Preference number: 2 (lower is better) Translates to: LCCIKIQSPAEECQA*GSMTCKPKVCTIYQ Trigger: CTGGTATATTGTGCATACTTTAGGTTTGCATGTCATAGAGCCCAAAGCCTGGCACTCCTCAGCAGGGGACTGAATCTTAATGCAGCACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR-3UTR TCA 90 bp | CTCAACACACAGTCTGGACTGAGTTTGTGCAAGACTCTAGGTACTGGGGATATGAAAATGGTTGGCACTTaGCTGTACTTCTGCCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: LNTQSGLSLCKTLGTGDMKMVGT*LYFCLS Trigger: ACTCAGGCAGAAGTACAGTCAAGTGCCAACCATTTT...CATATCCCCAGTACCTAGAGTCTTGCACAAACTCAGTCCAGACTGTGTGTTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR CAA 90 bp | AGTAGTGACCCTTTAGTTCAACTCAACACACAGTCTGGACTGAGTTaGTGCAAGACTCTAGGTACTGGGGATATGGTGAAAACGCACACA | + |
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Preference number: 2 (lower is better) Translates to: SSDPLVQLNTQSGLS*CKTLGTGDMVKTHT Trigger: TGTGTGCGTTTTCACCATATCCCCAGTACCTAGAGTCTTGCACAAACTCAGTCCAGACTGTGTGTTGAGTTGAACTAAAGGGTCACTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR-3UTR TCA 90 bp | GGGTTGGCAGGTCAGAGCCTGTTAAGAAAATGTGGCATCTCTGCCAAAGGAAAAGCTGAAGACCATATGTaGGGACATGAGATTTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: GLAGQSLLRKCGISAKGKAEDHM*GHEISF Trigger: GAAAGAAATCTCATGTCCTCACATATGGTCTTCAGC...TTTTCCTTTGGCAGAGATGCCACATTTTCTTAACAGGCTCTGACCTGCCAACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR-3UTR GCA 90 bp | AAAGGAGCCTCAGGAAACAAGCCCCATAACTGTCATATAAACATAAATCTAGATTCCCCTGCTGAGGAGTaGCAGGCTTTGGGCTCTATG | + |
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Preference number: 2 (lower is better) Translates to: KGASGNKPHNCHININLDSPAEE*QALGSM Trigger: CATAGAGCCCAAAGCCTGGCACTCCTCAGCAGGGGA...ATCTAGATTTATGTTTATATGACAGTTATGGGGCTTGTTTCCTGAGGCTCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR-3UTR TCA 90 bp | GGGTTGGCAGGTCAGAGCCTGTTAAGAAAATGTGGCATCTCTGCCAAAGGAAAACTTGTGCTTTCCATCTaGGGAGTAAAAATCACCAAT | + |
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Preference number: 2 (lower is better) Translates to: GLAGQSLLRKCGISAKGKLVLSI*GVKITN Trigger: ATTGGTGATTTTTACTCCTCAGATGGAAAGCACAAG...TTTTCCTTTGGCAGAGATGCCACATTTTCTTAACAGGCTCTGACCTGCCAACCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR-3UTR TCA 90 bp | CTCAACACACAGTCTGGACTGAGTTTGTGCAAGACTCTAGGTACTGGGGATATGCCTTTCATAGGGAAATaGAAATCAACTGCAACACTC | + |
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Preference number: 2 (lower is better) Translates to: LNTQSGLSLCKTLGTGDMPFIGK*KSTATL Trigger: GAGTGTTGCAGTTGATTTTCATTTCCCTATGAAAGG...CATATCCCCAGTACCTAGAGTCTTGCACAAACTCAGTCCAGACTGTGTGTTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR-3UTR TCA 90 bp | AATGGGAAGTCAGAATACATATACCTGCTGGGCTTTGATAATGAAAGAAAAGAAGGAGCTGGGATATCGTaGGTGAGGAGGAGACAGCTG | + |
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Preference number: 2 (lower is better) Translates to: NGKSEYIYLLGFDNERKEGAGIS*VRRRQL Trigger: CAGCTGTCTCCTCCTCACTCACGATATCCCAGCTCC...TTCTTTTCTTTCATTATCAAAGCCCAGCAGGTATATGTATTCTGACTTCCCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR-3UTR GCA 90 bp | CTCAACACACAGTCTGGACTGAGTTTGTGCAAGACTCTAGGTACTGGGGATATGTTGGGCTCTATGACATaGAAACCTAAAGTATGCACA | + |
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Preference number: 2 (lower is better) Translates to: LNTQSGLSLCKTLGTGDMLGSMT*KPKVCT Trigger: TGTGCATACTTTAGGTTTGCATGTCATAGAGCCCAA...CATATCCCCAGTACCTAGAGTCTTGCACAAACTCAGTCCAGACTGTGTGTTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR-3UTR TCA 90 bp | AATGGGAAGTCAGAATACATATACCTGCTGGGCTTTGATAATGAAAGAAAAGAACTGGGATATCGTGAGTaGGGAGGAGACAGCTGGTGT | + |
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Preference number: 2 (lower is better) Translates to: NGKSEYIYLLGFDNERKELGYRE*GGDSWC Trigger: ACACCAGCTGTCTCCTCCTCACTCACGATATCCCAG...TTCTTTTCTTTCATTATCAAAGCCCAGCAGGTATATGTATTCTGACTTCCCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR-3UTR TCA 90 bp | GACATCCTCCATCTCCTTAGCAAGAACACTAATAGCATTTATAAAAGTGGTGTGCAAGAGTTCTTGCTTTaGCCTTCCAGGTTGTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: DILHLLSKNTNSIYKSGVQEFLL*PSRLSQ Trigger: CTGGGACAACCTGGAAGGTCAAAGCAAGAACTCTTG...CACACCACTTTTATAAATGCTATTAGTGTTCTTGCTAAGGAGATGGAGGATGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR-3UTR GCA 90 bp | CTCAACACACAGTCTGGACTGAGTTTGTGCAAGACTCTAGGTACTGGGGATATGAGAATGTCCATCCTTTaGTCAATTTTAGCTCTGAAA | + |
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Preference number: 2 (lower is better) Translates to: LNTQSGLSLCKTLGTGDMRMSIL*SILALK Trigger: TTTCAGAGCTAAAATTGAGCAAAGGATGGACATTCT...CATATCCCCAGTACCTAGAGTCTTGCACAAACTCAGTCCAGACTGTGTGTTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR-3UTR GCA 90 bp | CTATCCAATTCCCTAGCATATTCCAGGCTTATATTCTTGAGATGGGCAGGAAGAGAAAAGCACTTGTGCTaGATTAAGATTCAGTCCCCT | + |
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Preference number: 2 (lower is better) Translates to: LSNSLAYSRLIFLRWAGREKHLC*IKIQSP Trigger: AGGGGACTGAATCTTAATGCAGCACAAGTGCTTTTC...TCTTCCTGCCCATCTCAAGAATATAAGCCTGGAATATGCTAGGGAATTGGATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR-3UTR GCA 90 bp | CTCAACACACAGTCTGGACTGAGTTTGTGCAAGACTCTAGGTACTGGGGATATGAAAGAACAATTTACATaGATATCAGCACCTCACAGA | + |
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Preference number: 2 (lower is better) Translates to: LNTQSGLSLCKTLGTGDMKEQFT*ISAPHR Trigger: TCTGTGAGGTGCTGATATGCATGTAAATTGTTCTTT...CATATCCCCAGTACCTAGAGTCTTGCACAAACTCAGTCCAGACTGTGTGTTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR-3UTR GCA 90 bp | CTCAACACACAGTCTGGACTGAGTTTGTGCAAGACTCTAGGTACTGGGGATATGCAGAATACATATACCTaGTGGGCTTTGATAATGAAA | + |
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Preference number: 2 (lower is better) Translates to: LNTQSGLSLCKTLGTGDMQNTYT*WALIMK Trigger: TTTCATTATCAAAGCCCAGCAGGTATATGTATTCTG...CATATCCCCAGTACCTAGAGTCTTGCACAAACTCAGTCCAGACTGTGTGTTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR-3UTR GCA 90 bp | GGGTTGGCAGGTCAGAGCCTGTTAAGAAAATGTGGCATCTCTGCCAAAGGAAAAACCCATTTTAAGAAATaGATTAACAGGAAGAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: GLAGQSLLRKCGISAKGKTHFKK*INRKRG Trigger: TCCTCTCTTCCTGTTAATGCATTTCTTAAAATGGGT...TTTTCCTTTGGCAGAGATGCCACATTTTCTTAACAGGCTCTGACCTGCCAACCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR-3UTR CCA 90 bp | GGGTTGGCAGGTCAGAGCCTGTTAAGAAAATGTGGCATCTCTGCCAAAGGAAAAACAGCAGATATGTTCTaGCACAATAATACCTCATAT | + |
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Preference number: 2 (lower is better) Translates to: GLAGQSLLRKCGISAKGKTADMF*HNNTSY Trigger: ATATGAGGTATTATTGTGCCAGAACATATCTGCTGT...TTTTCCTTTGGCAGAGATGCCACATTTTCTTAACAGGCTCTGACCTGCCAACCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR-3UTR CCA 90 bp | GACATCCTCCATCTCCTTAGCAAGAACACTAATAGCATTTATAAAAGTGGTGTGGATCTGTTGAGGCTGTaGATGTCTCTGCTTCTACTA | + |
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Preference number: 2 (lower is better) Translates to: DILHLLSKNTNSIYKSGVDLLRL*MSLLLL Trigger: TAGTAGAAGCAGAGACATCCACAGCCTCAACAGATC...CACACCACTTTTATAAATGCTATTAGTGTTCTTGCTAAGGAGATGGAGGATGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR-3UTR TCA 90 bp | CTATCCAATTCCCTAGCATATTCCAGGCTTATATTCTTGAGATGGGCAGGAAGAACTAATACTGAAACTTaGACCAACTTTCCTGGTGAA | + |
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Preference number: 2 (lower is better) Translates to: LSNSLAYSRLIFLRWAGRTNTET*TNFPGE Trigger: TTCACCAGGAAAGTTGGTTCAAGTTTCAGTATTAGT...TCTTCCTGCCCATCTCAAGAATATAAGCCTGGAATATGCTAGGGAATTGGATAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR-3UTR CCA 90 bp | CTATCCAATTCCCTAGCATATTCCAGGCTTATATTCTTGAGATGGGCAGGAAGAATTCTACCTGTTCAGTaGCCAATATACAGAAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: LSNSLAYSRLIFLRWAGRILPVQ*PIYRRK Trigger: CTTTCTTCTGTATATTGGCCACTGAACAGGTAGAAT...TCTTCCTGCCCATCTCAAGAATATAAGCCTGGAATATGCTAGGGAATTGGATAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR-3UTR CCA 90 bp | GACATCCTCCATCTCCTTAGCAAGAACACTAATAGCATTTATAAAAGTGGTGTGCTAAATCCTGATCAGTaGAGAAAGGATGAACAATGG | + |
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Preference number: 2 (lower is better) Translates to: DILHLLSKNTNSIYKSGVLNPDQ*RKDEQW Trigger: CCATTGTTCATCCTTTCTCCACTGATCAGGATTTAG...CACACCACTTTTATAAATGCTATTAGTGTTCTTGCTAAGGAGATGGAGGATGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR-3UTR TCA 90 bp | AAAGGAGCCTCAGGAAACAAGCCCCATAACTGTCATATAAACATAAATCTAGATTTCTATTTTCTGCGTTaGCATGTTACAGTGACACAG | + |
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Preference number: 2 (lower is better) Translates to: KGASGNKPHNCHININLDFYFLR*HVTVTQ Trigger: CTGTGTCACTGTAACATGTCAACGCAGAAAATAGAA...ATCTAGATTTATGTTTATATGACAGTTATGGGGCTTGTTTCCTGAGGCTCCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR-3UTR CCA 90 bp | AAAGGAGCCTCAGGAAACAAGCCCCATAACTGTCATATAAACATAAATCTAGATCTTATATTCTTGAGATaGGCAGGAAGAGGTACTTTG | + |
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Preference number: 2 (lower is better) Translates to: KGASGNKPHNCHININLDLIFLR*AGRGTL Trigger: CAAAGTACCTCTTCCTGCCCATCTCAAGAATATAAG...ATCTAGATTTATGTTTATATGACAGTTATGGGGCTTGTTTCCTGAGGCTCCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR-3UTR TCA 90 bp | AATGGGAAGTCAGAATACATATACCTGCTGGGCTTTGATAATGAAAGAAAAGAACCACAAAGACAAATATaGCTGTTTGTACAGCCTTGT | + |
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Preference number: 2 (lower is better) Translates to: NGKSEYIYLLGFDNERKEPQRQI*LFVQPC Trigger: ACAAGGCTGTACAAACAGTCATATTTGTCTTTGTGG...TTCTTTTCTTTCATTATCAAAGCCCAGCAGGTATATGTATTCTGACTTCCCATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR-3UTR GCA 90 bp | AAAGGAGCCTCAGGAAACAAGCCCCATAACTGTCATATAAACATAAATCTAGATAAAGTAAGTCTCTGCTaGTTCATAAGTACTTCCAAA | + |
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Preference number: 2 (lower is better) Translates to: KGASGNKPHNCHININLDKVSLC*FISTSK Trigger: TTTGGAAGTACTTATGAAGCAGCAGAGACTTACTTT...ATCTAGATTTATGTTTATATGACAGTTATGGGGCTTGTTTCCTGAGGCTCCTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR-3UTR GCA 90 bp | ACACCAAAACTGAATTTTCATCACACAAAGGCCAATTTAGTGCCGTTACATACTGAAATGAAAATCAACTaGAACACTCAGACAATTCCA | + |
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Preference number: 2 (lower is better) Translates to: TPKLNFHHTKANLVPLHTEMKIN*NTQTIP Trigger: TGGAATTGTCTGAGTGTTGCAGTTGATTTTCATTTC...AGTATGTAACGGCACTAAATTGGCCTTTGTGTGATGAAAATTCAGTTTTGGTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR-3UTR GCA 90 bp | AAAGGAGCCTCAGGAAACAAGCCCCATAACTGTCATATAAACATAAATCTAGATTGCAAACCTAAAGTATaGACAATATACCAGACTAGA | + |
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Preference number: 2 (lower is better) Translates to: KGASGNKPHNCHININLDCKPKV*TIYQTR Trigger: TCTAGTCTGGTATATTGTGCATACTTTAGGTTTGCA...ATCTAGATTTATGTTTATATGACAGTTATGGGGCTTGTTTCCTGAGGCTCCTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR TCA 72 bp | CCTCTCACCCTCACTGATCTCTCTGCCCTGGGCTTCTaGATCTTCCATCTCTTCCTAACCTTGGCCCTACCT | + |
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Preference number: 3 (lower is better) Translates to: PLTLTDLSALGF*IFHLFLTLALP Trigger: AGGTAGGGCCAAGGTTAGGAAGAGATGGAAGATTCAGAAGCCCAGGGCAGAGAGATCAGTGAGGGTGAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR CCA 72 bp | ACTCTCAACACCCTGTTACACTACAAAGGCCGGTGCTaGTCACTGCAAGTACAGGACACGAAGGGTCCTTCT | + |
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Preference number: 3 (lower is better) Translates to: TLNTLLHYKGRC*SLQVQDTKGPS Trigger: AGAAGGACCCTTCGTGTCCTGTACTTGCAGTGACCAGCACCGGCCTTTGTAGTGTAACAGGGTGTTGAGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR CCA 72 bp | GGGAAAGGACACAGTTCTGGTGACACAGGCATAGGCTaGTCAAGGCAGCACTGTCAATGTGAACAAGTCCTA | + |
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Preference number: 3 (lower is better) Translates to: GKGHSSGDTGIG*SRQHCQCEQVL Trigger: TAGGACTTGTTCACATTGACAGTGCTGCCTTGACCAGCCTATGCCTGTGTCACCAGAACTGTGTCCTTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR-3UTR CAA 90 bp | CTCAACACACAGTCTGGACTGAGTTTGTGCAAGACTCTAGGTACTGGGGATATGTCTCAGCCAGCATCTTaGCTTCTGAGCCCAACACAC | + |
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Preference number: 3 (lower is better) Translates to: LNTQSGLSLCKTLGTGDMSQPAS*LLSPTH Trigger: GTGTGTTGGGCTCAGAAGCAAAGATGCTGGCTGAGA...CATATCCCCAGTACCTAGAGTCTTGCACAAACTCAGTCCAGACTGTGTGTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR TCA 72 bp | TACAGTGACACAGAGGTTCCTAATACAGGATTCTGGTaGGACGATCTGCTCTGGCATCTCGCCAGAGAAAGC | + |
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Preference number: 3 (lower is better) Translates to: YSDTEVPNTGFW*DDLLWHLARES Trigger: GCTTTCTCTGGCGAGATGCCAGAGCAGATCGTCTCACCAGAATCCTGTATTAGGAACCTCTGTGTCACTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR CCA 72 bp | GGTAACACCACTGACCTCCACTTCAATCTGGTGAAGTaGGTTGGCAGGTCAGAGCCTGTTAAGAAAATGTGG | + |
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Preference number: 3 (lower is better) Translates to: GNTTDLHFNLVK*VGRSEPVKKMW Trigger: CCACATTTTCTTAACAGGCTCTGACCTGCCAACCCACTTCACCAGATTGAAGTGGAGGTCAGTGGTGTTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR TCA 72 bp | AGTCCCCTGCTGAGGAGTGCCAGGCTTTGGGCTCTATaGCATGCAAACCTAAAGTATGCACAATATACCAGA | + |
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Preference number: 3 (lower is better) Translates to: SPLLRSARLWAL*HANLKYAQYTR Trigger: TCTGGTATATTGTGCATACTTTAGGTTTGCATGTCATAGAGCCCAAAGCCTGGCACTCCTCAGCAGGGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| 3UTR GCA 72 bp | TTGTGCTGCATTAAGATTCAGTCCCCTGCTGAGGAGTaGCAGGCTTTGGGCTCTATGACATGCAAACCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: LCCIKIQSPAEE*QALGSMTCKPK Trigger: TTTAGGTTTGCATGTCATAGAGCCCAAAGCCTGGCACTCCTCAGCAGGGGACTGAATCTTAATGCAGCACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| 3UTR-3UTR CAA 90 bp | CTCAACACACAGTCTGGACTGAGTTTGTGCAAGACTCTAGGTACTGGGGATATGTCCAGGCTTATATTCTaGAGATGGGCAGGAAGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: LNTQSGLSLCKTLGTGDMSRLIF*RWAGRG Trigger: ACCTCTTCCTGCCCATCTCAAGAATATAAGCCTGGA...CATATCCCCAGTACCTAGAGTCTTGCACAAACTCAGTCCAGACTGTGTGTTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| 3UTR GCA 72 bp | CCTGCTGAGGAGTGCCAGGCTTTGGGCTCTATGACATaGAAACCTAAAGTATGCACAATATACCAGACTAGA | + |
|
Preference number: 3 (lower is better) Translates to: PAEECQALGSMT*KPKVCTIYQTR Trigger: TCTAGTCTGGTATATTGTGCATACTTTAGGTTTGCATGTCATAGAGCCCAAAGCCTGGCACTCCTCAGCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| 3UTR CCA 72 bp | ACAGTCTGGACTGAGTTTGTGCAAGACTCTAGGTACTaGGGATATGGTGAAAACGCACACACAAAACCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: TVWTEFVQDSRY*GYGENAHTKPD Trigger: GTCTGGTTTTGTGTGTGCGTTTTCACCATATCCCCAGTACCTAGAGTCTTGCACAAACTCAGTCCAGACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| 3UTR TCA 72 bp | TGGTCAAGGCAGCACTGTCAATGTGAACAAGTCCTATaGACATGTAGTCCATCACTCTCAACACCCTGTTAC | + |
|
Preference number: 3 (lower is better) Translates to: WSRQHCQCEQVL*TCSPSLSTPCY Trigger: GTAACAGGGTGTTGAGAGTGATGGACTACATGTTCATAGGACTTGTTCACATTGACAGTGCTGCCTTGACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| 3UTR-3UTR CAA 90 bp | GACATCCTCCATCTCCTTAGCAAGAACACTAATAGCATTTATAAAAGTGGTGTGGAGGAGTGCCAGGCTTaGGGCTCTATGACATGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: DILHLLSKNTNSIYKSGVEECQA*GSMTCK Trigger: TTTGCATGTCATAGAGCCCAAAGCCTGGCACTCCTC...CACACCACTTTTATAAATGCTATTAGTGTTCTTGCTAAGGAGATGGAGGATGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| 3UTR-3UTR CAA 90 bp | GGGTTGGCAGGTCAGAGCCTGTTAAGAAAATGTGGCATCTCTGCCAAAGGAAAAAAACCTCTTCCAGGATaGAACACTTTCATTGTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: GLAGQSLLRKCGISAKGKKPLPG*NTFIVN Trigger: GTTCACAATGAAAGTGTTCAATCCTGGAAGAGGTTT...TTTTCCTTTGGCAGAGATGCCACATTTTCTTAACAGGCTCTGACCTGCCAACCC 44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| 3UTR TCA 72 bp | TCAGCTATGATCAAGAAAGTTAAAATGGTTGGCACTTaGCTGTACTTCTGCCTGAGTTACCTGAGCACTGCC | + |
|
Preference number: 3 (lower is better) Translates to: SAMIKKVKMVGT*LYFCLSYLSTA Trigger: GGCAGTGCTCAGGTAACTCAGGCAGAAGTACAGTCAAGTGCCAACCATTTTAACTTTCTTGATCATAGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| 3UTR TCA 72 bp | AAACTACTTCCACCTCTCAGCCAGCATCTTTGCTTCTaGGCCCAACACACAATGTTCCTATTCTTAGTGATA | + |
|
Preference number: 3 (lower is better) Translates to: KLLPPLSQHLCF*AQHTMFLFLVI Trigger: TATCACTAAGAATAGGAACATTGTGTGTTGGGCTCAGAAGCAAAGATGCTGGCTGAGAGGTGGAAGTAGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| 3UTR GCA 72 bp | CAGGCTTTGGGCTCTATGACATGCAAACCTAAAGTATaGACAATATACCAGACTAGAATGTCCATCCTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: QALGSMTCKPKV*TIYQTRMSILC Trigger: GCAAAGGATGGACATTCTAGTCTGGTATATTGTGCATACTTTAGGTTTGCATGTCATAGAGCCCAAAGCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| 3UTR TCA 72 bp | GCAAGAACACTAATAGCATTTATAAAAGTGGTGTGGTaGGGCATAAAGCACTCTTCTAAGGCCATGGATGGA | + |
|
Preference number: 3 (lower is better) Translates to: ARTLIAFIKVVW*GIKHSSKAMDG Trigger: TCCATCCATGGCCTTAGAAGAGTGCTTTATGCCTCACCACACCACTTTTATAAATGCTATTAGTGTTCTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| 3UTR GCA 72 bp | ATTTTGTATCCTATTACAGGGAAAGTAAGTCTCTGCTaGTTCATAAGTACTTCCAAAGTACTTCAGGGCGGC | + |
|
Preference number: 3 (lower is better) Translates to: ILYPITGKVSLC*FISTSKVLQGG Trigger: GCCGCCCTGAAGTACTTTGGAAGTACTTATGAAGCAGCAGAGACTTACTTTCCCTGTAATAGGATACAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| 3UTR CCA 72 bp | AGAATGAAAACCAACAGAAAAACAAGGTTCTTCAAGTaGGCTTACCTATCCAATTCCCTAGCATATTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: RMKTNRKTRFFK*AYLSNSLAYSR Trigger: CCTGGAATATGCTAGGGAATTGGATAGGTAAGCCCACTTGAAGAACCTTGTTTTTCTGTTGGTTTTCATTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| 3UTR-3UTR CAA 90 bp | GACATCCTCCATCTCCTTAGCAAGAACACTAATAGCATTTATAAAAGTGGTGTGCAGACTCATCATTTGTaGTGTGAAAATGGTGACTCA | + |
|
Preference number: 3 (lower is better) Translates to: DILHLLSKNTNSIYKSGVQTHHL*CENGDS Trigger: TGAGTCACCATTTTCACACAACAAATGATGAGTCTG...CACACCACTTTTATAAATGCTATTAGTGTTCTTGCTAAGGAGATGGAGGATGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| 3UTR-3UTR CAA 90 bp | GACATCCTCCATCTCCTTAGCAAGAACACTAATAGCATTTATAAAAGTGGTGTGTATACCTGCTGGGCTTaGATAATGAAAGAAAAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: DILHLLSKNTNSIYKSGVYTCWA*IMKEKN Trigger: GTTCTTTTCTTTCATTATCAAAGCCCAGCAGGTATA...CACACCACTTTTATAAATGCTATTAGTGTTCTTGCTAAGGAGATGGAGGATGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| 3UTR TCA 72 bp | AAATGTCTCCACACTATAAAGGCTGAAGACCATATGTaGGGACATGAGATTTCTTTCAGGTTAAGTATCTCA | + |
|
Preference number: 3 (lower is better) Translates to: KCLHTIKAEDHM*GHEISFRLSIS Trigger: TGAGATACTTAACCTGAAAGAAATCTCATGTCCTCACATATGGTCTTCAGCCTTTATAGTGTGGAGACATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| 3UTR-3UTR CAA 90 bp | AATGGGAAGTCAGAATACATATACCTGCTGGGCTTTGATAATGAAAGAAAAGAAATGCAGACTCATCATTaGTTGTGTGAAAATGGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: NGKSEYIYLLGFDNERKEMQTHH*LCENGD Trigger: GTCACCATTTTCACACAACAAATGATGAGTCTGCAT...TTCTTTTCTTTCATTATCAAAGCCCAGCAGGTATATGTATTCTGACTTCCCATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| 3UTR GCA 72 bp | TTTCTCAAATCCCATTCTATATGGAAGTATCAACAATaGAGACTCATCATTTGTTGTGTGAAAATGGTGACT | + |
|
Preference number: 3 (lower is better) Translates to: FLKSHSIWKYQQ*RLIICCVKMVT Trigger: AGTCACCATTTTCACACAACAAATGATGAGTCTGCATTGTTGATACTTCCATATAGAATGGGATTTGAGAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| CDS-3UTR TCA 90 bp | AAAGGAGCCTCAGGAAACAAGCCCCATAACTGTCATATAAACATAAATCTAGATCCAGGCCGAAGAGGCTaGAGCGGCCGGCCAGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KGASGNKPHNCHININLDPGRRG*SGRPGS Trigger: GCTTCCTGGCCGGCCGCTTCAGCCTCTTCGGCCTGG...ATCTAGATTTATGTTTATATGACAGTTATGGGGCTTGTTTCCTGAGGCTCCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| CDS-3UTR TCA 90 bp | CTCAACACACAGTCTGGACTGAGTTTGTGCAAGACTCTAGGTACTGGGGATATGTCCGGTTCCATACAATaGCCTCCTTGTCAGAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LNTQSGLSLCKTLGTGDMSGSIQ*PPCQRH Trigger: ATGCCTCTGACAAGGAGGTCATTGTATGGAACCGGA...CATATCCCCAGTACCTAGAGTCTTGCACAAACTCAGTCCAGACTGTGTGTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| CDS-3UTR GCA 90 bp | GGGTTGGCAGGTCAGAGCCTGTTAAGAAAATGTGGCATCTCTGCCAAAGGAAAATCCTCAGTATTTATCTaGACGTTGGGGAAGGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: GLAGQSLLRKCGISAKGKSSVFI*TLGKAV Trigger: GACGGCCTTCCCCAACGTGCAGATAAATACTGAGGA...TTTTCCTTTGGCAGAGATGCCACATTTTCTTAACAGGCTCTGACCTGCCAACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| CDS-3UTR TCA 90 bp | CTATCCAATTCCCTAGCATATTCCAGGCTTATATTCTTGAGATGGGCAGGAAGATGGGGAAGGCCGTCTTaGGCAGGTAGAACATCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSNSLAYSRLIFLRWAGRWGRPS*AGRTSC Trigger: GCAAGATGTTCTACCTGCTCAAGACGGCCTTCCCCA...TCTTCCTGCCCATCTCAAGAATATAAGCCTGGAATATGCTAGGGAATTGGATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| CDS-3UTR TCA 90 bp | GGGTTGGCAGGTCAGAGCCTGTTAAGAAAATGTGGCATCTCTGCCAAAGGAAAACCCAGCTGGGATAATTaGAGTCTGGTTTCCAAACGT | + |
|
Preference number: 4 (lower is better) Translates to: GLAGQSLLRKCGISAKGKPSWDN*SLVSKR Trigger: ACGTTTGGAAACCAGACTTCAATTATCCCAGCTGGG...TTTTCCTTTGGCAGAGATGCCACATTTTCTTAACAGGCTCTGACCTGCCAACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| CDS-3UTR CCA 90 bp | CTATCCAATTCCCTAGCATATTCCAGGCTTATATTCTTGAGATGGGCAGGAAGACGCGCGTCTTCCCCTTaGACTTCTCGTGAAGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: LSNSLAYSRLIFLRWAGRRASSP*TSREGH Trigger: ATGTCCTTCACGAGAAGTCCAAGGGGAAGACGCGCG...TCTTCCTGCCCATCTCAAGAATATAAGCCTGGAATATGCTAGGGAATTGGATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| CDS-3UTR GCA 90 bp | CTCAACACACAGTCTGGACTGAGTTTGTGCAAGACTCTAGGTACTGGGGATATGCTGTTTGACCATTCCTaGATGAGAGCGAGACACAAT | + |
|
Preference number: 4 (lower is better) Translates to: LNTQSGLSLCKTLGTGDMLFDHS*MRARHN Trigger: ATTGTGTCTCGCTCTCATGCAGGAATGGTCAAACAG...CATATCCCCAGTACCTAGAGTCTTGCACAAACTCAGTCCAGACTGTGTGTTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| CDS-3UTR TCA 90 bp | ACACCAAAACTGAATTTTCATCACACAAAGGCCAATTTAGTGCCGTTACATACTCCCTTGGACTTCTCGTaGAGGACATTGCTCTCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: TPKLNFHHTKANLVPLHTPLDFS*RTLLSR Trigger: CCGCGAGAGCAATGTCCTTCACGAGAAGTCCAAGGG...AGTATGTAACGGCACTAAATTGGCCTTTGTGTGATGAAAATTCAGTTTTGGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| CDS-3UTR TCA 90 bp | CTCAACACACAGTCTGGACTGAGTTTGTGCAAGACTCTAGGTACTGGGGATATGAGATCTGCTTTTTCTTaGGTCATATCAGGCACATCC | + |
|
Preference number: 4 (lower is better) Translates to: LNTQSGLSLCKTLGTGDMRSAFS*VISGTS Trigger: GGATGTGCCTGATATGACTCAAGAAAAAGCAGATCT...CATATCCCCAGTACCTAGAGTCTTGCACAAACTCAGTCCAGACTGTGTGTTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| CDS-3UTR CCA 90 bp | GACATCCTCCATCTCCTTAGCAAGAACACTAATAGCATTTATAAAAGTGGTGTGAGAACATCTTGCGGTTaGACAGTACGTCGCCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DILHLLSKNTNSIYKSGVRTSCG*TVRRRW Trigger: CCAGCGGCGACGTACTGTCCAACCGCAAGATGTTCT...CACACCACTTTTATAAATGCTATTAGTGTTCTTGCTAAGGAGATGGAGGATGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| CDS-3UTR GCA 90 bp | GGGTTGGCAGGTCAGAGCCTGTTAAGAAAATGTGGCATCTCTGCCAAAGGAAAACTTTTAAGATGGCATTaGCAGCACATATATCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: GLAGQSLLRKCGISAKGKLLRWH*QHIYPT Trigger: AGTGGGATATATGTGCTGGCAATGCCATCTTAAAAG...TTTTCCTTTGGCAGAGATGCCACATTTTCTTAACAGGCTCTGACCTGCCAACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| CDS-3UTR CCA 90 bp | ACACCAAAACTGAATTTTCATCACACAAAGGCCAATTTAGTGCCGTTACATACTACAGTACGTCGCCGCTaGTCATCTTATCATCGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: TPKLNFHHTKANLVPLHTTVRRR*SSYHRR Trigger: GCGCCGATGATAAGATGACCAGCGGCGACGTACTGT...AGTATGTAACGGCACTAAATTGGCCTTTGTGTGATGAAAATTCAGTTTTGGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| 3UTR CAA 72 bp | AACTTCACTACTGTGAAGAAGCAGCCCTCACAACCATaGCTGGTCAAGATTAGAATCCTTCCCTCATTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: NFTTVKKQPSQP*LVKIRILPSLG Trigger: TCCTAATGAGGGAAGGATTCTAATCTTGACCAGCAATGGTTGTGAGGGCTGCTTCTTCACAGTAGTGAAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| 3UTR CAA 72 bp | CCTTTAGTTCAACTCAACACACAGTCTGGACTGAGTTaGTGCAAGACTCTAGGTACTGGGGATATGGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PLVQLNTQSGLS*CKTLGTGDMVK Trigger: TTTCACCATATCCCCAGTACCTAGAGTCTTGCACAAACTCAGTCCAGACTGTGTGTTGAGTTGAACTAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| CDS-3UTR TCA 90 bp | TACTGTAACATACTGTTACATACTGTTAAGTACGGGGAAAAGCACTTGTGCTGCTTGACCATTCCTGCATaGGAGCGAGACACAATGATC | + |
|
Preference number: 4 (lower is better) Translates to: YCNILLHTVKYGEKHLCCLTIPA*ERDTMI Trigger: GATCATTGTGTCTCGCTCTCATGCAGGAATGGTCAA...GCAGCACAAGTGCTTTTCCCCGTACTTAACAGTATGTAACAGTATGTTACAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| CDS-3UTR GCA 90 bp | AAAGGAGCCTCAGGAAACAAGCCCCATAACTGTCATATAAACATAAATCTAGATGCAGGTAGAACATCTTaGGGTTGGACAGTACGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: KGASGNKPHNCHININLDAGRTS*GWTVRR Trigger: GCGACGTACTGTCCAACCGCAAGATGTTCTACCTGC...ATCTAGATTTATGTTTATATGACAGTTATGGGGCTTGTTTCCTGAGGCTCCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| CDS-3UTR TCA 90 bp | GACATCCTCCATCTCCTTAGCAAGAACACTAATAGCATTTATAAAAGTGGTGTGGAGAGCGAGACACAATaGTCTTTGGGGTCTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DILHLLSKNTNSIYKSGVESETQ*SLGSSH Trigger: ATGAGAAGACCCCAAAGATCATTGTGTCTCGCTCTC...CACACCACTTTTATAAATGCTATTAGTGTTCTTGCTAAGGAGATGGAGGATGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| CDS-3UTR TCA 90 bp | GACATCCTCCATCTCCTTAGCAAGAACACTAATAGCATTTATAAAAGTGGTGTGAATCCGGAAGTTTTCTaGCCAGAGCTTGGTGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: DILHLLSKNTNSIYKSGVNPEVF*PELGGS Trigger: TGAACCACCAAGCTCTGGTCAGAAAACTTCCGGATT...CACACCACTTTTATAAATGCTATTAGTGTTCTTGCTAAGGAGATGGAGGATGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| CDS-3UTR GCA 90 bp | TACTGTAACATACTGTTACATACTGTTAAGTACGGGGAAAAGCACTTGTGCTGCCTCCTAACACAGGTTTaGCATTCACAGCTACACACA | + |
|
Preference number: 4 (lower is better) Translates to: YCNILLHTVKYGEKHLCCLLTQV*HSQLHT Trigger: TGTGTGTAGCTGTGAATGGCAAACCTGTGTTAGGAG...GCAGCACAAGTGCTTTTCCCCGTACTTAACAGTATGTAACAGTATGTTACAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| CDS-3UTR GCA 90 bp | AAAGGAGCCTCAGGAAACAAGCCCCATAACTGTCATATAAACATAAATCTAGATGAAGTCCCCCTTCAATaGCATCAGACCCAGTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: KGASGNKPHNCHININLDEVPLQ*HQTQCN Trigger: GTTACACTGGGTCTGATGGCATTGAAGGGGGACTTC...ATCTAGATTTATGTTTATATGACAGTTATGGGGCTTGTTTCCTGAGGCTCCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| CDS-3UTR CCA 90 bp | TACTGTAACATACTGTTACATACTGTTAAGTACGGGGAAAAGCACTTGTGCTGCCTGTGTAGCATCAAGTaGGTCAATCCAAACTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: YCNILLHTVKYGEKHLCCLCSIK*VNPNCH Trigger: GTGACAGTTTGGATTGACCCACTTGATGCTACACAG...GCAGCACAAGTGCTTTTCCCCGTACTTAACAGTATGTAACAGTATGTTACAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| CDS-3UTR CCA 90 bp | AATGGGAAGTCAGAATACATATACCTGCTGGGCTTTGATAATGAAAGAAAAGAATGTCACACTTTCTGCTaGTACCTCCTTAGGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NGKSEYIYLLGFDNERKECHTFC*YLLRSS Trigger: GCTGCTCCTAAGGAGGTACCAGCAGAAAGTGTGACA...TTCTTTTCTTTCATTATCAAAGCCCAGCAGGTATATGTATTCTGACTTCCCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| CDS-3UTR CCA 90 bp | AATGGGAAGTCAGAATACATATACCTGCTGGGCTTTGATAATGAAAGAAAAGAACTTCTCCATTCAGAGTaGTCATATGGCCACCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NGKSEYIYLLGFDNERKELLHSE*SYGHQG Trigger: CCCTTGGTGGCCATATGACCACTCTGAATGGAGAAG...TTCTTTTCTTTCATTATCAAAGCCCAGCAGGTATATGTATTCTGACTTCCCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| CDS-3UTR CCA 90 bp | ACACCAAAACTGAATTTTCATCACACAAAGGCCAATTTAGTGCCGTTACATACTCTGACCAGAGCTTGGTaGTTCATTCTGATGCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TPKLNFHHTKANLVPLHTLTRAW*FILMLA Trigger: TGCTAGCATCAGAATGAACCACCAAGCTCTGGTCAG...AGTATGTAACGGCACTAAATTGGCCTTTGTGTGATGAAAATTCAGTTTTGGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| CDS-3UTR GCA 90 bp | GACATCCTCCATCTCCTTAGCAAGAACACTAATAGCATTTATAAAAGTGGTGTGACCACCATCTACCATTaGCCAAGCTGTATATTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: DILHLLSKNTNSIYKSGVTTIYH*PSCIFR Trigger: TCTGAATATACAGCTTGGGCAATGGTAGATGGTGGT...CACACCACTTTTATAAATGCTATTAGTGTTCTTGCTAAGGAGATGGAGGATGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| CDS-3UTR CCA 90 bp | ACACCAAAACTGAATTTTCATCACACAAAGGCCAATTTAGTGCCGTTACATACTTTCAGAGTGGTCATATaGCCACCAAGGGCTTTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: TPKLNFHHTKANLVPLHTFRVVI*PPRAFK Trigger: CTTAAAAGCCCTTGGTGGCCATATGACCACTCTGAA...AGTATGTAACGGCACTAAATTGGCCTTTGTGTGATGAAAATTCAGTTTTGGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| 3UTR CAA 72 bp | ATTATAAAAACTACTTCCACCTCTCAGCCAGCATCTTaGCTTCTGAGCCCAACACACAATGTTCCTATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IIKTTSTSQPAS*LLSPTHNVPIL Trigger: AAGAATAGGAACATTGTGTGTTGGGCTCAGAAGCAAAGATGCTGGCTGAGAGGTGGAAGTAGTTTTTATAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| CDS-3UTR CCA 90 bp | ACACCAAAACTGAATTTTCATCACACAAAGGCCAATTTAGTGCCGTTACATACTCAAGGGCTTTTAAGATaGCATTGCCAGCACATATAT | + |
|
Preference number: 4 (lower is better) Translates to: TPKLNFHHTKANLVPLHTQGLLR*HCQHIY Trigger: ATATATGTGCTGGCAATGCCATCTTAAAAGCCCTTG...AGTATGTAACGGCACTAAATTGGCCTTTGTGTGATGAAAATTCAGTTTTGGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| CDS GCA 90 bp | CGGCCGCCAGCACGGCCACGGCCAGCATCTCGCGCAGGTCCACCGTaGCCCCGTCGGACGCCACCTCGGCCTCCCCTGCCGCCGGCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: RPPARPRPASRAGPP*PRRTPPRPPLPPAR Trigger: GCGAGCCGGCGGCAGGGGAGGCCGAGGTGGCGTCCGACGGGGGCACGGTGGACCTGCGCGAGATGCTGGCCGTGGCCGTGCTGGCGGCCG 80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
||
| CDS GCA 90 bp | GCGCAGGTCCACCGTGCCCCCGTCGGACGCCACCTCGGCCTCCCCTaGCGCCGGCTCGCTGCCCAGGCCGAAGAGGCTGAAGCGGCCGGC | + |
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Preference number: 5 (lower is better) Translates to: AQVHRAPVGRHLGLP*RRLAAQAEEAEAAG Trigger: GCCGGCCGCTTCAGCCTCTTCGGCCTGGGCAGCGAGCCGGCGGCAGGGGAGGCCGAGGTGGCGTCCGACGGGGGCACGGTGGACCTGCGC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| CDS TCA 90 bp | CCTCGGCCTCCCCTGCCGCCGGCTCGCTGCCCAGGCCGAAGAGGCTaGAGCGGCCGGCCAGGAAGCCCGAGTAGAGGTGGTAGAGCACCC | + |
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Preference number: 5 (lower is better) Translates to: PRPPLPPARCPGRRG*SGRPGSPSRGGRAP Trigger: GGGTGCTCTACCACCTCTACTCGGGCTTCCTGGCCGGCCGCTTCAGCCTCTTCGGCCTGGGCAGCGAGCCGGCGGCAGGGGAGGCCGAGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| CDS GCA 90 bp | CGGCGCCCTCGCGCGTCTTCCCCTTGGACTTCTCGTGAAGGACATTaGTCTCGCGGACCCGCCTCACCTCGTCGCCGCCGCGCTCGGCCG | + |
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Preference number: 5 (lower is better) Translates to: RRPRASSPWTSREGH*SRGPASPRRRRARP Trigger: CGGCCGAGCGCGGCGGCGACGAGGTGAGGCGGGTCCGCGAGAGCAATGTCCTTCACGAGAAGTCCAAGGGGAAGACGCGCGAGGGCGCCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| CDS TCA 90 bp | ATCTTATCATCGGCGCCCTCGCGCGTCTTCCCCTTGGACTTCTCGTaGAGGACATTGCTCTCGCGGACCCGCCTCACCTCGTCGCCGCCG | + |
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Preference number: 5 (lower is better) Translates to: ILSSAPSRVFPLDFS*RTLLSRTRLTSSPP Trigger: CGGCGGCGACGAGGTGAGGCGGGTCCGCGAGAGCAATGTCCTTCACGAGAAGTCCAAGGGGAAGACGCGCGAGGGCGCCGATGATAAGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| CDS CCA 90 bp | CGCCGCTGGTCATCTTATCATCGGCGCCCTCGCGCGTCTTCCCCTTaGACTTCTCGTGAAGGACATTGCTCTCGCGGACCCGCCTCACCT | + |
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Preference number: 5 (lower is better) Translates to: RRWSSYHRRPRASSP*TSREGHCSRGPASP Trigger: AGGTGAGGCGGGTCCGCGAGAGCAATGTCCTTCACGAGAAGTCCAAGGGGAAGACGCGCGAGGGCGCCGATGATAAGATGACCAGCGGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| CDS GCA 90 bp | TTCCTGTGTAGCATCAAGTGGGTCAATCCAAACTGTCACACTTTCTaGTGGTACCTCCTTAGGAGCAGCGATTTCCTTCAGGATGTCCTC | + |
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Preference number: 5 (lower is better) Translates to: FLCSIKWVNPNCHTF*WYLLRSSDFLQDVL Trigger: GAGGACATCCTGAAGGAAATCGCTGCTCCTAAGGAGGTACCAGCAGAAAGTGTGACAGTTTGGATTGACCCACTTGATGCTACACAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| CDS-3UTR CAA 90 bp | CTCAACACACAGTCTGGACTGAGTTTGTGCAAGACTCTAGGTACTGGGGATATGCATACAATGACCTCCTaGTCAGAGGCATCCACATGT | + |
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Preference number: 5 (lower is better) Translates to: LNTQSGLSLCKTLGTGDMHTMTS*SEASTC Trigger: ACATGTGGATGCCTCTGACAAGGAGGTCATTGTATG...CATATCCCCAGTACCTAGAGTCTTGCACAAACTCAGTCCAGACTGTGTGTTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| CDS TCA 90 bp | CGATTTCCTTCAGGATGTCCTCAGGAATCTTCCGGTTCCATACAATaGCCTCCTTGTCAGAGGCATCCACATGTTCCTCAGTATTTATCT | + |
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Preference number: 5 (lower is better) Translates to: RFPSGCPQESSGSIQ*PPCQRHPHVPQYLS Trigger: AGATAAATACTGAGGAACATGTGGATGCCTCTGACAAGGAGGTCATTGTATGGAACCGGAAGATTCCTGAGGACATCCTGAAGGAAATCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| CDS CCA 90 bp | GACATACTTTCGAAGATCCTCTGTGTATTCCTGTGTAGCATCAAGTaGGTCAATCCAAACTGTCACACTTTCTGCTGGTACCTCCTTAGG | + |
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Preference number: 5 (lower is better) Translates to: DILSKILCVFLCSIK*VNPNCHTFCWYLLR Trigger: CCTAAGGAGGTACCAGCAGAAAGTGTGACAGTTTGGATTGACCCACTTGATGCTACACAGGAATACACAGAGGATCTTCGAAAGTATGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| CDS-3UTR CAA 90 bp | ACACCAAAACTGAATTTTCATCACACAAAGGCCAATTTAGTGCCGTTACATACTACTCCTAACACAGGTTaGCCATTCACAGCTACACAC | + |
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Preference number: 5 (lower is better) Translates to: TPKLNFHHTKANLVPLHTTPNTG*PFTATH Trigger: GTGTGTAGCTGTGAATGGCAAACCTGTGTTAGGAGT...AGTATGTAACGGCACTAAATTGGCCTTTGTGTGATGAAAATTCAGTTTTGGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| CDS-3UTR CAA 90 bp | ACACCAAAACTGAATTTTCATCACACAAAGGCCAATTTAGTGCCGTTACATACTTTTTCTGACCAGAGCTaGGTGGTTCATTCTGATGCT | + |
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Preference number: 5 (lower is better) Translates to: TPKLNFHHTKANLVPLHTFSDQS*VVHSDA Trigger: AGCATCAGAATGAACCACCAAGCTCTGGTCAGAAAA...AGTATGTAACGGCACTAAATTGGCCTTTGTGTGATGAAAATTCAGTTTTGGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| CDS GCA 72 bp | GCACGGCCACGGCCAGCATCTCGCGCAGGTCCACCGTaGCCCCGTCGGACGCCACCTCGGCCTCCCCTGCCG | + |
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Preference number: 6 (lower is better) Translates to: ARPRPASRAGPP*PRRTPPRPPLP Trigger: CGGCAGGGGAGGCCGAGGTGGCGTCCGACGGGGGCACGGTGGACCTGCGCGAGATGCTGGCCGTGGCCGTGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| CDS GCA 72 bp | CACCGTGCCCCCGTCGGACGCCACCTCGGCCTCCCCTaGCGCCGGCTCGCTGCCCAGGCCGAAGAGGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: HRAPVGRHLGLP*RRLAAQAEEAE Trigger: TTCAGCCTCTTCGGCCTGGGCAGCGAGCCGGCGGCAGGGGAGGCCGAGGTGGCGTCCGACGGGGGCACGGTG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| CDS GCA 72 bp | CGCGCGTCTTCCCCTTGGACTTCTCGTGAAGGACATTaGTCTCGCGGACCCGCCTCACCTCGTCGCCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: RASSPWTSREGH*SRGPASPRRRR Trigger: GCGGCGGCGACGAGGTGAGGCGGGTCCGCGAGAGCAATGTCCTTCACGAGAAGTCCAAGGGGAAGACGCGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| CDS TCA 72 bp | TCGGCGCCCTCGCGCGTCTTCCCCTTGGACTTCTCGTaGAGGACATTGCTCTCGCGGACCCGCCTCACCTCG | + |
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Preference number: 6 (lower is better) Translates to: SAPSRVFPLDFS*RTLLSRTRLTS Trigger: CGAGGTGAGGCGGGTCCGCGAGAGCAATGTCCTTCACGAGAAGTCCAAGGGGAAGACGCGCGAGGGCGCCGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| CDS CCA 72 bp | TCATCTTATCATCGGCGCCCTCGCGCGTCTTCCCCTTaGACTTCTCGTGAAGGACATTGCTCTCGCGGACCC | + |
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Preference number: 6 (lower is better) Translates to: SSYHRRPRASSP*TSREGHCSRGP Trigger: GGGTCCGCGAGAGCAATGTCCTTCACGAGAAGTCCAAGGGGAAGACGCGCGAGGGCGCCGATGATAAGATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| CDS CCA 72 bp | GGTAGAACATCTTGCGGTTGGACAGTACGTCGCCGCTaGTCATCTTATCATCGGCGCCCTCGCGCGTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: GRTSCGWTVRRR*SSYHRRPRASS Trigger: GGAAGACGCGCGAGGGCGCCGATGATAAGATGACCAGCGGCGACGTACTGTCCAACCGCAAGATGTTCTACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| CDS TCA 72 bp | CCTCAGTATTTATCTGCACGTTGGGGAAGGCCGTCTTaGGCAGGTAGAACATCTTGCGGTTGGACAGTACGT | + |
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Preference number: 6 (lower is better) Translates to: PQYLSARWGRPS*AGRTSCGWTVR Trigger: ACGTACTGTCCAACCGCAAGATGTTCTACCTGCTCAAGACGGCCTTCCCCAACGTGCAGATAAATACTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| CDS TCA 72 bp | TCAGGATGTCCTCAGGAATCTTCCGGTTCCATACAATaGCCTCCTTGTCAGAGGCATCCACATGTTCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: SGCPQESSGSIQ*PPCQRHPHVPQ Trigger: CTGAGGAACATGTGGATGCCTCTGACAAGGAGGTCATTGTATGGAACCGGAAGATTCCTGAGGACATCCTGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| CDS GCA 72 bp | AGCATCAAGTGGGTCAATCCAAACTGTCACACTTTCTaGTGGTACCTCCTTAGGAGCAGCGATTTCCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: SIKWVNPNCHTF*WYLLRSSDFLQ Trigger: CTGAAGGAAATCGCTGCTCCTAAGGAGGTACCAGCAGAAAGTGTGACAGTTTGGATTGACCCACTTGATGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| CDS CCA 72 bp | GACCATTCCTGCATGAGAGCGAGACACAATGATCTTTaGGGTCTTCTCATTGTAGGAAGAACGGGCTTTCAC | + |
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Preference number: 6 (lower is better) Translates to: DHSCMRARHNDL*GLLIVGRTGFH Trigger: GTGAAAGCCCGTTCTTCCTACAATGAGAAGACCCCAAAGATCATTGTGTCTCGCTCTCATGCAGGAATGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| CDS CCA 72 bp | ATCAAGTGGGTCAATCCAAACTGTCACACTTTCTGCTaGTACCTCCTTAGGAGCAGCGATTTCCTTCAGGAT | + |
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Preference number: 6 (lower is better) Translates to: IKWVNPNCHTFC*YLLRSSDFLQD Trigger: ATCCTGAAGGAAATCGCTGCTCCTAAGGAGGTACCAGCAGAAAGTGTGACAGTTTGGATTGACCCACTTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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| CDS CCA 72 bp | TCGAAGATCCTCTGTGTATTCCTGTGTAGCATCAAGTaGGTCAATCCAAACTGTCACACTTTCTGCTGGTAC | + |
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Preference number: 6 (lower is better) Translates to: SKILCVFLCSIK*VNPNCHTFCWY Trigger: GTACCAGCAGAAAGTGTGACAGTTTGGATTGACCCACTTGATGCTACACAGGAATACACAGAGGATCTTCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084949.3 |
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