Pregenerated sensors for BCAN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004892Ensembl transcript IDs: ENSMUST00000090971.11, ENSMUST00000194193.2
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATGAGAGGGCAGTTGAGGCACTTAGGGACTTACCGGGTAAAACCTaGGGCCCTTGTGTGAGGGGGCGGAGCCACCCAAGTGTTTCCCAG | + |
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Preference number: 1 (lower is better) Translates to: HERAVEALRDLPGKT*GPCVRGRSHPSVSQ Trigger: CTGGGAAACACTTGGGTGGCTCCGCCCCCTCACACAAGGGCCTCAGGTTTTACCCGGTAAGTCCCTAAGTGCCTCAACTGCCCTCTCATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| 3UTR TCA 90 bp | AATAGCACAGTGTCCCCTAACGAAATCGAGGGACAAGGAGGCAGCTaGCATGAGAGGGCAGTTGAGGCACTTAGGGACTTACCGGGTAAA | + |
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Preference number: 1 (lower is better) Translates to: NSTVSPNEIEGQGGS*HERAVEALRDLPGK Trigger: TTTACCCGGTAAGTCCCTAAGTGCCTCAACTGCCCTCTCATGTCAGCTGCCTCCTTGTCCCTCGATTTCGTTAGGGGACACTGTGCTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| 3UTR-3UTR CCA 90 bp | AAATCGAGGGACAAGGAGGCAGCTGACATGAGAGGGCAGTTGAGGCACTTAGGGGTGAGAGGGTCCTGCTaGGGGCAGCAGTCTTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: KSRDKEAADMRGQLRHLGVRGSC*GQQSSR Trigger: CCTGGAAGACTGCTGCCCCCAGCAGGACCCTCTCAC...CCCTAAGTGCCTCAACTGCCCTCTCATGTCAGCTGCCTCCTTGTCCCTCGATTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| 3UTR CAA 90 bp | CTAACGAAATCGAGGGACAAGGAGGCAGCTGACATGAGAGGGCAGTaGAGGCACTTAGGGACTTACCGGGTAAAACCTGAGGCCCTTGTG | + |
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Preference number: 2 (lower is better) Translates to: LTKSRDKEAADMRGQ*RHLGTYRVKPEALV Trigger: CACAAGGGCCTCAGGTTTTACCCGGTAAGTCCCTAAGTGCCTCAACTGCCCTCTCATGTCAGCTGCCTCCTTGTCCCTCGATTTCGTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| 3UTR-3UTR CCA 90 bp | ATGAGAGGGCAGTTGAGGCACTTAGGGACTTACCGGGTAAAACCTGAGGCCCTTCGTCACCCCCTATCATaGGGAAGAGCACTGGCAGTT | + |
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Preference number: 2 (lower is better) Translates to: MRGQLRHLGTYRVKPEALRHPLS*GRALAV Trigger: AACTGCCAGTGCTCTTCCCCATGATAGGGGGTGACG...AAGGGCCTCAGGTTTTACCCGGTAAGTCCCTAAGTGCCTCAACTGCCCTCTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| 3UTR TCA 72 bp | GCAGTTGAGGCACTTAGGGACTTACCGGGTAAAACCTaGGGCCCTTGTGTGAGGGGGCGGAGCCACCCAAGT | + |
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Preference number: 3 (lower is better) Translates to: AVEALRDLPGKT*GPCVRGRSHPS Trigger: ACTTGGGTGGCTCCGCCCCCTCACACAAGGGCCTCAGGTTTTACCCGGTAAGTCCCTAAGTGCCTCAACTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| 3UTR TCA 72 bp | GTGTCCCCTAACGAAATCGAGGGACAAGGAGGCAGCTaGCATGAGAGGGCAGTTGAGGCACTTAGGGACTTA | + |
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Preference number: 3 (lower is better) Translates to: VSPNEIEGQGGS*HERAVEALRDL Trigger: TAAGTCCCTAAGTGCCTCAACTGCCCTCTCATGTCAGCTGCCTCCTTGTCCCTCGATTTCGTTAGGGGACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| 3UTR-3UTR CAA 90 bp | TCAGACAACTTTATTTCCACCTGGTTTTGCTGGTACTCCATCCTAAAAACTCTTGACATGAGAGGGCAGTaGAGGCACTTAGGGACTTAC | + |
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Preference number: 3 (lower is better) Translates to: SDNFISTWFCWYSILKTLDMRGQ*RHLGTY Trigger: GTAAGTCCCTAAGTGCCTCAACTGCCCTCTCATGTC...AAGAGTTTTTAGGATGGAGTACCAGCAAAACCAGGTGGAAATAAAGTTGTCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR CCA 90 bp | AAATCGAGGGACAAGGAGGCAGCTGACATGAGAGGGCAGTTGAGGCACTTAGGGAGGGCGGCAGGGGCTTaGGTCAGGACCAGAGCGGCC | + |
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Preference number: 4 (lower is better) Translates to: KSRDKEAADMRGQLRHLGRAAGA*VRTRAA Trigger: GGCCGCTCTGGTCCTGACCCAAGCCCCTGCCGCCCT...CCCTAAGTGCCTCAACTGCCCTCTCATGTCAGCTGCCTCCTTGTCCCTCGATTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR CCA 90 bp | AAATCGAGGGACAAGGAGGCAGCTGACATGAGAGGGCAGTTGAGGCACTTAGGGGGCTGGCACTGTCGGTaGGCAGCACTGGCTGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: KSRDKEAADMRGQLRHLGGWHCR*AALAGP Trigger: AGGCCCAGCCAGTGCTGCCCACCGACAGTGCCAGCC...CCCTAAGTGCCTCAACTGCCCTCTCATGTCAGCTGCCTCCTTGTCCCTCGATTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR GCA 90 bp | AAATCGAGGGACAAGGAGGCAGCTGACATGAGAGGGCAGTTGAGGCACTTAGGGAGCACTGGCTGGGCCTaGACTGAGGTGCCTGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: KSRDKEAADMRGQLRHLGSTGWA*TEVPAR Trigger: CCTGGCAGGCACCTCAGTGCAGGCCCAGCCAGTGCT...CCCTAAGTGCCTCAACTGCCCTCTCATGTCAGCTGCCTCCTTGTCCCTCGATTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR TCA 90 bp | AAATCGAGGGACAAGGAGGCAGCTGACATGAGAGGGCAGTTGAGGCACTTAGGGACAGGAAGGTCCACTTaGCCCGGGGAAAACCCGGCG | + |
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Preference number: 4 (lower is better) Translates to: KSRDKEAADMRGQLRHLGTGRST*PGENPA Trigger: CGCCGGGTTTTCCCCGGGTCAAGTGGACCTTCCTGT...CCCTAAGTGCCTCAACTGCCCTCTCATGTCAGCTGCCTCCTTGTCCCTCGATTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR TCA 90 bp | ACGAAATCGAGGGACAAGGAGGCAGCTGACATGAGAGGGCAGTTGAGGCACTTAAGAGGAAGAGGGTCTTaGCTCCTGGCAGGCCGCCCC | + |
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Preference number: 4 (lower is better) Translates to: TKSRDKEAADMRGQLRHLRGRGS*LLAGRP Trigger: GGGGCGGCCTGCCAGGAGTCAAGACCCTCTTCCTCT...TAAGTGCCTCAACTGCCCTCTCATGTCAGCTGCCTCCTTGTCCCTCGATTTCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR GCA 90 bp | AAATCGAGGGACAAGGAGGCAGCTGACATGAGAGGGCAGTTGAGGCACTTAGGGAGTCCTGGGGGCCTCTaGTGGGTCTTCTGGGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: KSRDKEAADMRGQLRHLGSPGGL*WVFWGG Trigger: TCCACCCCAGAAGACCCAGCAGAGGCCCCCAGGACT...CCCTAAGTGCCTCAACTGCCCTCTCATGTCAGCTGCCTCCTTGTCCCTCGATTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR CCA 90 bp | ACGAAATCGAGGGACAAGGAGGCAGCTGACATGAGAGGGCAGTTGAGGCACTTAGGCCATCCTCCAAGCTaGAGCTCCCTGCCTCCTCGC | + |
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Preference number: 4 (lower is better) Translates to: TKSRDKEAADMRGQLRHLGHPPS*SSLPPR Trigger: GCGAGGAGGCAGGGAGCTCCAGCTTGGAGGATGGCC...TAAGTGCCTCAACTGCCCTCTCATGTCAGCTGCCTCCTTGTCCCTCGATTTCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR CCA 90 bp | ATGAGAGGGCAGTTGAGGCACTTAGGGACTTACCGGGTAAAACCTGAGGCCCTTGTGGGCAGCACTGGCTaGGCCTGCACTGAGGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: MRGQLRHLGTYRVKPEALVGSTG*ACTEVP Trigger: AGGCACCTCAGTGCAGGCCCAGCCAGTGCTGCCCAC...AAGGGCCTCAGGTTTTACCCGGTAAGTCCCTAAGTGCCTCAACTGCCCTCTCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR CCA 90 bp | CGAATAGCACAGTGTCCCCTAACGAAATCGAGGGACAAGGAGGCAGCTGACATGACAGCCACTCCACCGTaGCTGGCACTGTCGGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: RIAQCPLTKSRDKEAADMTATPP*LALSVG Trigger: GCCCACCGACAGTGCCAGCCACGGTGGAGTGGCTGT...CATGTCAGCTGCCTCCTTGTCCCTCGATTTCGTTAGGGGACACTGTGCTATTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR TCA 90 bp | CGAATAGCACAGTGTCCCCTAACGAAATCGAGGGACAAGGAGGCAGCTGACATGGGCCTCAAGTCCATCTaGGGCTGGGCTAGAGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: RIAQCPLTKSRDKEAADMGLKSI*GWARGL Trigger: GAGGCCTCTAGCCCAGCCTCAGATGGACTTGAGGCC...CATGTCAGCTGCCTCCTTGTCCCTCGATTTCGTTAGGGGACACTGTGCTATTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR GCA 90 bp | CGAATAGCACAGTGTCCCCTAACGAAATCGAGGGACAAGGAGGCAGCTGACATGCCTCCCATGTCAGCTTaGTGGGAGGGGCGCCTAGGA | + |
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Preference number: 4 (lower is better) Translates to: RIAQCPLTKSRDKEAADMPPMSA*WEGRLG Trigger: TCCTAGGCGCCCCTCCCAGCAAGCTGACATGGGAGG...CATGTCAGCTGCCTCCTTGTCCCTCGATTTCGTTAGGGGACACTGTGCTATTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR GCA 90 bp | ACGAAATCGAGGGACAAGGAGGCAGCTGACATGAGAGGGCAGTTGAGGCACTTACAAGCTGGAGCTCCCTaGCTCCTCGCTCTCTCGAGG | + |
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Preference number: 4 (lower is better) Translates to: TKSRDKEAADMRGQLRHLQAGAP*LLALSR Trigger: CCTCGAGAGAGCGAGGAGGCAGGGAGCTCCAGCTTG...TAAGTGCCTCAACTGCCCTCTCATGTCAGCTGCCTCCTTGTCCCTCGATTTCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR GCA 90 bp | ACGAAATCGAGGGACAAGGAGGCAGCTGACATGAGAGGGCAGTTGAGGCACTTAGGGCGGTGTCAACGGTaGCTTCCTGTGCCTCGAGAG | + |
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Preference number: 4 (lower is better) Translates to: TKSRDKEAADMRGQLRHLGRCQR*LPVPRE Trigger: CTCTCGAGGCACAGGAAGGCACCGTTGACACCGCCC...TAAGTGCCTCAACTGCCCTCTCATGTCAGCTGCCTCCTTGTCCCTCGATTTCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR CCA 90 bp | CGAATAGCACAGTGTCCCCTAACGAAATCGAGGGACAAGGAGGCAGCTGACATGAGAGCTGCTCCGGGGTaGCGATTCGGGCTCCTATGC | + |
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Preference number: 4 (lower is better) Translates to: RIAQCPLTKSRDKEAADMRAAPG*RFGLLC Trigger: GCATAGGAGCCCGAATCGCCACCCCGGAGCAGCTCT...CATGTCAGCTGCCTCCTTGTCCCTCGATTTCGTTAGGGGACACTGTGCTATTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR TCA 90 bp | AAATCGAGGGACAAGGAGGCAGCTGACATGAGAGGGCAGTTGAGGCACTTAGGGCCAGGGCTGCAGAAATaGAGGCCAACATCGCACAGG | + |
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Preference number: 4 (lower is better) Translates to: KSRDKEAADMRGQLRHLGPGLQK*RPTSHR Trigger: CCTGTGCGATGTTGGCCTTCATTTCTGCAGCCCTGG...CCCTAAGTGCCTCAACTGCCCTCTCATGTCAGCTGCCTCCTTGTCCCTCGATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR TCA 90 bp | CGAATAGCACAGTGTCCCCTAACGAAATCGAGGGACAAGGAGGCAGCTGACATGCCTAGCGCTCGGCACTaGCTTTCTGCCTCCTCCCAA | + |
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Preference number: 4 (lower is better) Translates to: RIAQCPLTKSRDKEAADMPSARH*LSASSQ Trigger: TTGGGAGGAGGCAGAAAGTCAGTGCCGAGCGCTAGG...CATGTCAGCTGCCTCCTTGTCCCTCGATTTCGTTAGGGGACACTGTGCTATTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR GCA 90 bp | ACGAAATCGAGGGACAAGGAGGCAGCTGACATGAGAGGGCAGTTGAGGCACTTAGCCACCATTCCAGGCTaGGTACAGCTGGCCTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: TKSRDKEAADMRGQLRHLATIPG*VQLACA Trigger: AGCACAGGCCAGCTGTACGCAGCCTGGAATGGTGGC...TAAGTGCCTCAACTGCCCTCTCATGTCAGCTGCCTCCTTGTCCCTCGATTTCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR GCA 90 bp | ATGAGAGGGCAGTTGAGGCACTTAGGGACTTACCGGGTAAAACCTGAGGCCCTTGGGCCTGCACTGAGGTaGCTGCCAGGACAGTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: MRGQLRHLGTYRVKPEALGPALR*LPGQFF Trigger: GAAGAACTGTCCTGGCAGGCACCTCAGTGCAGGCCC...AAGGGCCTCAGGTTTTACCCGGTAAGTCCCTAAGTGCCTCAACTGCCCTCTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR CCA 90 bp | ACGAAATCGAGGGACAAGGAGGCAGCTGACATGAGAGGGCAGTTGAGGCACTTACTGGGTCTTCTGGGGTaGAGCTTCCTCCTCCCCCAT | + |
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Preference number: 4 (lower is better) Translates to: TKSRDKEAADMRGQLRHLLGLLG*SFLLPH Trigger: ATGGGGGAGGAGGAAGCTCCACCCCAGAAGACCCAG...TAAGTGCCTCAACTGCCCTCTCATGTCAGCTGCCTCCTTGTCCCTCGATTTCGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR CCA 90 bp | ATGAGAGGGCAGTTGAGGCACTTAGGGACTTACCGGGTAAAACCTGAGGCCCTTAGCTGTAGAACTGCCTaGGCTGGTGGGGACACCTGG | + |
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Preference number: 4 (lower is better) Translates to: MRGQLRHLGTYRVKPEALSCRTA*AGGDTW Trigger: CCAGGTGTCCCCACCAGCCCAGGCAGTTCTACAGCT...AAGGGCCTCAGGTTTTACCCGGTAAGTCCCTAAGTGCCTCAACTGCCCTCTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR CCA 90 bp | AAATCGAGGGACAAGGAGGCAGCTGACATGAGAGGGCAGTTGAGGCACTTAGGGCAAAGCCCATTCTCCTaGCAGCGGATCAACGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: KSRDKEAADMRGQLRHLGQSPFS*QRINGR Trigger: CCTGCCGTTGATCCGCTGCCAGGAGAATGGGCTTTG...CCCTAAGTGCCTCAACTGCCCTCTCATGTCAGCTGCCTCCTTGTCCCTCGATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR TCA 90 bp | CGAATAGCACAGTGTCCCCTAACGAAATCGAGGGACAAGGAGGCAGCTGACATGGGTCATGCCACACCATaGCCACACAGTTCTCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: RIAQCPLTKSRDKEAADMGHATP*PHSSPQ Trigger: CTGGGGAGAACTGTGTGGTCATGGTGTGGCATGACC...CATGTCAGCTGCCTCCTTGTCCCTCGATTTCGTTAGGGGACACTGTGCTATTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR TCA 90 bp | ATGAGAGGGCAGTTGAGGCACTTAGGGACTTACCGGGTAAAACCTGAGGCCCTTGGTACACAGGAAATCTaGGGGGCCTCCCAAAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: MRGQLRHLGTYRVKPEALGTQEI*GASQSP Trigger: TGGGCTTTGGGAGGCCCCTCAGATTTCCTGTGTACC...AAGGGCCTCAGGTTTTACCCGGTAAGTCCCTAAGTGCCTCAACTGCCCTCTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR GCA 90 bp | AAATCGAGGGACAAGGAGGCAGCTGACATGAGAGGGCAGTTGAGGCACTTAGGGACCCACAGGTCCTCCTaGTCCTTCTCTTCCTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: KSRDKEAADMRGQLRHLGTHRSS*SFSSSR Trigger: TCTGGAGGAAGAGAAGGAGCAGGAGGACCTGTGGGT...CCCTAAGTGCCTCAACTGCCCTCTCATGTCAGCTGCCTCCTTGTCCCTCGATTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR GCA 90 bp | AAATCGAGGGACAAGGAGGCAGCTGACATGAGAGGGCAGTTGAGGCACTTAGGGCACTGTCCCTGGTCATaGCACACCATGACCACACAG | + |
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Preference number: 4 (lower is better) Translates to: KSRDKEAADMRGQLRHLGHCPWS*HTMTTQ Trigger: CTGTGTGGTCATGGTGTGGCATGACCAGGGACAGTG...CCCTAAGTGCCTCAACTGCCCTCTCATGTCAGCTGCCTCCTTGTCCCTCGATTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR CCA 90 bp | ACGAAATCGAGGGACAAGGAGGCAGCTGACATGAGAGGGCAGTTGAGGCACTTAAGAGCAGGCCTCTCGTaGGTTCTGGATGGGGTACCT | + |
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Preference number: 4 (lower is better) Translates to: TKSRDKEAADMRGQLRHLRAGLS*VLDGVP Trigger: AGGTACCCCATCCAGAACCCACGAGAGGCCTGCTCT...TAAGTGCCTCAACTGCCCTCTCATGTCAGCTGCCTCCTTGTCCCTCGATTTCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR CCA 90 bp | ACGAAATCGAGGGACAAGGAGGCAGCTGACATGAGAGGGCAGTTGAGGCACTTAATTCTAGCGGAGTCCTaGGGGCCTCTGCTGGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: TKSRDKEAADMRGQLRHLILAES*GPLLGL Trigger: AAGACCCAGCAGAGGCCCCCAGGACTCCGCTAGAAT...TAAGTGCCTCAACTGCCCTCTCATGTCAGCTGCCTCCTTGTCCCTCGATTTCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR CCA 90 bp | ACGAAATCGAGGGACAAGGAGGCAGCTGACATGAGAGGGCAGTTGAGGCACTTACATGTCCCACCATTGTaGCAGGGGCTGGGGATACAG | + |
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Preference number: 4 (lower is better) Translates to: TKSRDKEAADMRGQLRHLHVPPL*QGLGIQ Trigger: CTGTATCCCCAGCCCCTGCCACAATGGTGGGACATG...TAAGTGCCTCAACTGCCCTCTCATGTCAGCTGCCTCCTTGTCCCTCGATTTCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR GCA 90 bp | ACGAAATCGAGGGACAAGGAGGCAGCTGACATGAGAGGGCAGTTGAGGCACTTATCGGCACTGACTTTCTaGCTCCTCCCAACTCCTTCG | + |
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Preference number: 4 (lower is better) Translates to: TKSRDKEAADMRGQLRHLSALTF*LLPTPS Trigger: CGAAGGAGTTGGGAGGAGGCAGAAAGTCAGTGCCGA...TAAGTGCCTCAACTGCCCTCTCATGTCAGCTGCCTCCTTGTCCCTCGATTTCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR CCA 90 bp | CGAATAGCACAGTGTCCCCTAACGAAATCGAGGGACAAGGAGGCAGCTGACATGGCCTCTCGTGGGTTCTaGATGGGGTACCTCACAGTT | + |
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Preference number: 4 (lower is better) Translates to: RIAQCPLTKSRDKEAADMASRGF*MGYLTV Trigger: AACTGTGAGGTACCCCATCCAGAACCCACGAGAGGC...CATGTCAGCTGCCTCCTTGTCCCTCGATTTCGTTAGGGGACACTGTGCTATTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR CCA 90 bp | ACGAAATCGAGGGACAAGGAGGCAGCTGACATGAGAGGGCAGTTGAGGCACTTACTTCTGAGATGGGGATaGAGTAGATGGCCCCACGAG | + |
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Preference number: 4 (lower is better) Translates to: TKSRDKEAADMRGQLRHLLLRWG*SRWPHE Trigger: CTCGTGGGGCCATCTACTCCATCCCCATCTCAGAAG...TAAGTGCCTCAACTGCCCTCTCATGTCAGCTGCCTCCTTGTCCCTCGATTTCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR CCA 90 bp | ATGAGAGGGCAGTTGAGGCACTTAGGGACTTACCGGGTAAAACCTGAGGCCCTTCCCCATCTTCTGAGATaGGGATGGAGTAGATGGCCC | + |
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Preference number: 4 (lower is better) Translates to: MRGQLRHLGTYRVKPEALPHLLR*GWSRWP Trigger: GGGCCATCTACTCCATCCCCATCTCAGAAGATGGGG...AAGGGCCTCAGGTTTTACCCGGTAAGTCCCTAAGTGCCTCAACTGCCCTCTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR CCA 90 bp | ATGAGAGGGCAGTTGAGGCACTTAGGGACTTACCGGGTAAAACCTGAGGCCCTTTCACTCCACTGTCCCTaGTCATGCCACACCATGACC | + |
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Preference number: 4 (lower is better) Translates to: MRGQLRHLGTYRVKPEALSLHCP*SCHTMT Trigger: GGTCATGGTGTGGCATGACCAGGGACAGTGGAGTGA...AAGGGCCTCAGGTTTTACCCGGTAAGTCCCTAAGTGCCTCAACTGCCCTCTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR GCA 90 bp | ATGAGAGGGCAGTTGAGGCACTTAGGGACTTACCGGGTAAAACCTGAGGCCCTTGGACTCGGTAGGTGGTaGAATGGATTGGGTTTCCGA | + |
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Preference number: 4 (lower is better) Translates to: MRGQLRHLGTYRVKPEALGLGRW*NGLGFR Trigger: TCGGAAACCCAATCCATTGCACCACCTACCGAGTCC...AAGGGCCTCAGGTTTTACCCGGTAAGTCCCTAAGTGCCTCAACTGCCCTCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR CCA 90 bp | ACGAAATCGAGGGACAAGGAGGCAGCTGACATGAGAGGGCAGTTGAGGCACTTAGGAAGCCAGTCTGGTTaGGAAAGAGGAAGAGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: TKSRDKEAADMRGQLRHLGSQSG*ERGRGS Trigger: AGACCCTCTTCCTCTTTCCCAACCAGACTGGCTTCC...TAAGTGCCTCAACTGCCCTCTCATGTCAGCTGCCTCCTTGTCCCTCGATTTCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR CCA 90 bp | ATGAGAGGGCAGTTGAGGCACTTAGGGACTTACCGGGTAAAACCTGAGGCCCTTTTGAGCCCAATCCACTaGTACTCCCGGTATCGATCG | + |
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Preference number: 4 (lower is better) Translates to: MRGQLRHLGTYRVKPEALLSPIH*YSRYRS Trigger: CGATCGATACCGGGAGTACCAGTGGATTGGGCTCAA...AAGGGCCTCAGGTTTTACCCGGTAAGTCCCTAAGTGCCTCAACTGCCCTCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR CCA 90 bp | ATGAGAGGGCAGTTGAGGCACTTAGGGACTTACCGGGTAAAACCTGAGGCCCTTCCCAACTCCTTCGTGTaGAAAAGTGCTTGTAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: MRGQLRHLGTYRVKPEALPNSFV*KSACSR Trigger: CCTGCTACAAGCACTTTTCCACACGAAGGAGTTGGG...AAGGGCCTCAGGTTTTACCCGGTAAGTCCCTAAGTGCCTCAACTGCCCTCTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR TCA 90 bp | ACGAAATCGAGGGACAAGGAGGCAGCTGACATGAGAGGGCAGTTGAGGCACTTAGCTTTTCTGTCACTGTaGCAATGGCCTCAAGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TKSRDKEAADMRGQLRHLAFLSL*QWPQVH Trigger: ATGGACTTGAGGCCATTGTCACAGTGACAGAAAAGC...TAAGTGCCTCAACTGCCCTCTCATGTCAGCTGCCTCCTTGTCCCTCGATTTCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR GCA 90 bp | CGAATAGCACAGTGTCCCCTAACGAAATCGAGGGACAAGGAGGCAGCTGACATGACCTGGGAGAGTGAATaGTCTGTTTCTGAGCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: RIAQCPLTKSRDKEAADMTWESE*SVSEPV Trigger: TACTGGCTCAGAAACAGAGCATTCACTCTCCCAGGT...CATGTCAGCTGCCTCCTTGTCCCTCGATTTCGTTAGGGGACACTGTGCTATTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR GCA 90 bp | ATGAGAGGGCAGTTGAGGCACTTAGGGACTTACCGGGTAAAACCTGAGGCCCTTACACAAGCCCCATCTTaGAGGTGTAGGATAGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: MRGQLRHLGTYRVKPEALTQAPS*RCRIDG Trigger: ACCATCTATCCTACACCTGCAAGATGGGGCTTGTGT...AAGGGCCTCAGGTTTTACCCGGTAAGTCCCTAAGTGCCTCAACTGCCCTCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR CCA 90 bp | TCAGACAACTTTATTTCCACCTGGTTTTGCTGGTACTCCATCCTAAAAACTCTTTGCGGCGGCCGCAGGTaGTGGACGTGGCATGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SDNFISTWFCWYSILKTLCGGRR*WTWHGM Trigger: CATCCCATGCCACGTCCACCACCTGCGGCCGCCGCA...AAGAGTTTTTAGGATGGAGTACCAGCAAAACCAGGTGGAAATAAAGTTGTCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR TCA 90 bp | ACGAAATCGAGGGACAAGGAGGCAGCTGACATGAGAGGGCAGTTGAGGCACTTAGAGCCTCCAAGTCTTTaGATCTTTCTTCTTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TKSRDKEAADMRGQLRHLEPPSL*IFLLPP Trigger: TGGAGGAAGAAGAAAGATTCAAAGACTTGGAGGCTC...TAAGTGCCTCAACTGCCCTCTCATGTCAGCTGCCTCCTTGTCCCTCGATTTCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR CCA 90 bp | TCAGACAACTTTATTTCCACCTGGTTTTGCTGGTACTCCATCCTAAAAACTCTTCCTGGGGGCCTCTGCTaGGTCTTCTGGGGTGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SDNFISTWFCWYSILKTLPGGLC*VFWGGA Trigger: AGCTCCACCCCAGAAGACCCAGCAGAGGCCCCCAGG...AAGAGTTTTTAGGATGGAGTACCAGCAAAACCAGGTGGAAATAAAGTTGTCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR CCA 90 bp | TCAGACAACTTTATTTCCACCTGGTTTTGCTGGTACTCCATCCTAAAAACTCTTCCGCCCCCACAGCGTTaGCTGGGTGTGATGATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SDNFISTWFCWYSILKTLPPPQR*LGVMMG Trigger: TCCCATCATCACACCCAGCCAACGCTGTGGGGGCGG...AAGAGTTTTTAGGATGGAGTACCAGCAAAACCAGGTGGAAATAAAGTTGTCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR CCA 90 bp | TCAGACAACTTTATTTCCACCTGGTTTTGCTGGTACTCCATCCTAAAAACTCTTCGAGCGCAGGCTTCCTaGGCTCCAGCAAAGGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SDNFISTWFCWYSILKTLRAQAS*APAKEK Trigger: TTTCTCCTTTGCTGGAGCCCAGGAAGCCTGCGCTCG...AAGAGTTTTTAGGATGGAGTACCAGCAAAACCAGGTGGAAATAAAGTTGTCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR CCA 90 bp | TCAGACAACTTTATTTCCACCTGGTTTTGCTGGTACTCCATCCTAAAAACTCTTAGCGGTTCTGCTTGCTaGGGAAGCCAGTCTGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SDNFISTWFCWYSILKTLSGSAC*GSQSGW Trigger: CCAACCAGACTGGCTTCCCCAGCAAGCAGAACCGCT...AAGAGTTTTTAGGATGGAGTACCAGCAAAACCAGGTGGAAATAAAGTTGTCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR TCA 90 bp | TCAGACAACTTTATTTCCACCTGGTTTTGCTGGTACTCCATCCTAAAAACTCTTGGGCGACCAAATATTTaGGCCAGGGGTAGCTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SDNFISTWFCWYSILKTLGRPNI*ARGSCG Trigger: ACCACAGCTACCCCTGGCTCAAATATTTGGTCGCCC...AAGAGTTTTTAGGATGGAGTACCAGCAAAACCAGGTGGAAATAAAGTTGTCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
||
| CDS-3UTR CCA 90 bp | TCAGACAACTTTATTTCCACCTGGTTTTGCTGGTACTCCATCCTAAAAACTCTTCATTGTGGCAGGGGCTaGGGATACAGTCACCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: SDNFISTWFCWYSILKTLHCGRG*GYSHLM Trigger: CATCAGGTGACTGTATCCCCAGCCCCTGCCACAATG...AAGAGTTTTTAGGATGGAGTACCAGCAAAACCAGGTGGAAATAAAGTTGTCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS CCA 90 bp | CCCGGCGCGGCCCGGCGACTGTGCGGCGGCCGCAGGTGGTGGACGTaGCATGGGATGGCCAGGGCACCGCCCAGCACGCCCCGCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PGAARRLCGGRRWWT*HGMARAPPSTPRSC Trigger: GCAGCTGCGGGGCGTGCTGGGCGGTGCCCTGGCCATCCCATGCCACGTCCACCACCTGCGGCCGCCGCACAGTCGCCGGGCCGCGCCGGG 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090971.11 ENSMUST00000194193.2 |
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| CDS CCA 90 bp | CGCGGCCCGGCGACTGTGCGGCGGCCGCAGGTGGTGGACGTGGCATaGGATGGCCAGGGCACCGCCCAGCACGCCCCGCAGCTGCGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RGPATVRRPQVVDVA*DGQGTAQHAPQLRG Trigger: GCCACGCAGCTGCGGGGCGTGCTGGGCGGTGCCCTGGCCATCCCATGCCACGTCCACCACCTGCGGCCGCCGCACAGTCGCCGGGCCGCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090971.11 ENSMUST00000194193.2 |
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| CDS CCA 90 bp | GGAAAACCCGGCGCGGCCCGGCGACTGTGCGGCGGCCGCAGGTGGTaGACGTGGCATGGGATGGCCAGGGCACCGCCCAGCACGCCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: GKPGAARRLCGGRRW*TWHGMARAPPSTPR Trigger: GCGGGGCGTGCTGGGCGGTGCCCTGGCCATCCCATGCCACGTCCACCACCTGCGGCCGCCGCACAGTCGCCGGGCCGCGCCGGGTTTTCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090971.11 ENSMUST00000194193.2 |
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| CDS CCA 90 bp | CGGGGAAAACCCGGCGCGGCCCGGCGACTGTGCGGCGGCCGCAGGTaGTGGACGTGGCATGGGATGGCCAGGGCACCGCCCAGCACGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RGKPGAARRLCGGRR*WTWHGMARAPPSTP Trigger: GGGCGTGCTGGGCGGTGCCCTGGCCATCCCATGCCACGTCCACCACCTGCGGCCGCCGCACAGTCGCCGGGCCGCGCCGGGTTTTCCCCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090971.11 ENSMUST00000194193.2 |
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| CDS CCA 90 bp | CCCGGCGACTGTGCGGCGGCCGCAGGTGGTGGACGTGGCATGGGATaGCCAGGGCACCGCCCAGCACGCCCCGCAGCTGCGTGGCACCGA | + |
|
Preference number: 5 (lower is better) Translates to: PGDCAAAAGGGRGMG*PGHRPARPAAAWHR Trigger: TCGGTGCCACGCAGCTGCGGGGCGTGCTGGGCGGTGCCCTGGCCATCCCATGCCACGTCCACCACCTGCGGCCGCCGCACAGTCGCCGGG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090971.11 ENSMUST00000194193.2 |
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| CDS GCA 90 bp | ACGTGGCATGGGATGGCCAGGGCACCGCCCAGCACGCCCCGCAGCTaGGTGGCACCGATGCGCACGCGGAAGGCTCGATCCTCCGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TWHGMARAPPSTPRS*VAPMRTRKARSSEL Trigger: CAGCTCGGAGGATCGAGCCTTCCGCGTGCGCATCGGTGCCACGCAGCTGCGGGGCGTGCTGGGCGGTGCCCTGGCCATCCCATGCCACGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090971.11 ENSMUST00000194193.2 |
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| CDS GCA 90 bp | AAGGTCCACTTGACCCGGGGAAAACCCGGCGCGGCCCGGCGACTGTaGGGCGGCCGCAGGTGGTGGACGTGGCATGGGATGGCCAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: KVHLTRGKPGAARRL*GGRRWWTWHGMARA Trigger: TGCCCTGGCCATCCCATGCCACGTCCACCACCTGCGGCCGCCGCACAGTCGCCGGGCCGCGCCGGGTTTTCCCCGGGTCAAGTGGACCTT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090971.11 ENSMUST00000194193.2 |
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| CDS CCA 90 bp | GGCATGGGATGGCCAGGGCACCGCCCAGCACGCCCCGCAGCTGCGTaGCACCGATGCGCACGCGGAAGGCTCGATCCTCCGAGCTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GMGWPGHRPARPAAA*HRCARGRLDPPSCL Trigger: AAGACAGCTCGGAGGATCGAGCCTTCCGCGTGCGCATCGGTGCCACGCAGCTGCGGGGCGTGCTGGGCGGTGCCCTGGCCATCCCATGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090971.11 ENSMUST00000194193.2 |
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| CDS TCA 90 bp | GGTAGGCAGGCAGCGCCACGCGGAACCGGTAGGCTTCGTTTACCTTaGCGCGCAGCCCACGAGCCACCAGTACCTCTACCTCCCGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GRQAAPRGTGRLRLP*RAAHEPPVPLPPGP Trigger: GGGACCGGGAGGTAGAGGTACTGGTGGCTCGTGGGCTGCGCGTCAAGGTAAACGAAGCCTACCGGTTCCGCGTGGCGCTGCCTGCCTACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS CCA 90 bp | GGATACAGTCACCTGATGAGGGAGCCACAGCCACTCCACCGTGGCTaGCACTGTCGGTGGGCAGCACTGGCTGGGCCTGCACTGAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GYSHLMREPQPLHRG*HCRWAALAGPALRC Trigger: GCACCTCAGTGCAGGCCCAGCCAGTGCTGCCCACCGACAGTGCCAGCCACGGTGGAGTGGCTGTGGCTCCCTCATCAGGTGACTGTATCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS TCA 90 bp | ATGGAGCGCAGAGCACGGCCAGGCCTCCGGGGTACACAGGAAATCTaGGGGGCCTCCCAAAGCCCATTCTCCTGGCAGCGGATCAACGGC | + |
|
Preference number: 5 (lower is better) Translates to: MERRARPGLRGTQEI*GASQSPFSWQRING Trigger: GCCGTTGATCCGCTGCCAGGAGAATGGGCTTTGGGAGGCCCCTCAGATTTCCTGTGTACCCCGGAGGCCTGGCCGTGCTCTGCGCTCCAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS CCA 90 bp | ACAGCCACTCCACCGTGGCTGGCACTGTCGGTGGGCAGCACTGGCTaGGCCTGCACTGAGGTGCCTGCCAGGACAGTTCTTCCAGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: TATPPWLALSVGSTG*ACTEVPARTVLPDF Trigger: GAAGTCTGGAAGAACTGTCCTGGCAGGCACCTCAGTGCAGGCCCAGCCAGTGCTGCCCACCGACAGTGCCAGCCACGGTGGAGTGGCTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS TCA 90 bp | CGGAATCATTGGGCCGCAGTTCGCTCAATACTAGAGACACATCCGTaGGCGATGCGGGGTAGGCAGGCAGCGCCACGCGGAACCGGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: RNHWAAVRSILETHP*AMRGRQAAPRGTGR Trigger: CCTACCGGTTCCGCGTGGCGCTGCCTGCCTACCCCGCATCGCTCACGGATGTGTCTCTAGTATTGAGCGAACTGCGGCCCAATGATTCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS GCA 90 bp | ACTCCACCGTGGCTGGCACTGTCGGTGGGCAGCACTGGCTGGGCCTaGACTGAGGTGCCTGCCAGGACAGTTCTTCCAGACTTCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: TPPWLALSVGSTGWA*TEVPARTVLPDFSS Trigger: AGAAGAGAAGTCTGGAAGAACTGTCCTGGCAGGCACCTCAGTGCAGGCCCAGCCAGTGCTGCCCACCGACAGTGCCAGCCACGGTGGAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS GCA 90 bp | GGGCCTCCCAAAGCCCATTCTCCTGGCAGCGGATCAACGGCAGGTTaGGCTGAGCCAGCCCGTCTCGGCATCGATATCGAAGCACAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: GPPKAHSPGSGSTAG*AEPARLGIDIEAQY Trigger: ATACTGTGCTTCGATATCGATGCCGAGACGGGCTGGCTCAGCGCAACCTGCCGTTGATCCGCTGCCAGGAGAATGGGCTTTGGGAGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR CAA 90 bp | AAATCGAGGGACAAGGAGGCAGCTGACATGAGAGGGCAGTTGAGGCACTTAGGGGCCGCCCCCACAGCGTaGGCTGGGTGTGATGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: KSRDKEAADMRGQLRHLGAAPTA*AGCDDG Trigger: CCCATCATCACACCCAGCCAACGCTGTGGGGGCGGC...CCCTAAGTGCCTCAACTGCCCTCTCATGTCAGCTGCCTCCTTGTCCCTCGATTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS TCA 90 bp | TCCCAAAGCCCATTCTCCTGGCAGCGGATCAACGGCAGGTTGCGCTaGGCCAGCCCGTCTCGGCATCGATATCGAAGCACAGTATCCACC | + |
|
Preference number: 5 (lower is better) Translates to: SQSPFSWQRINGRLR*ASPSRHRYRSTVST Trigger: GGTGGATACTGTGCTTCGATATCGATGCCGAGACGGGCTGGCTCAGCGCAACCTGCCGTTGATCCGCTGCCAGGAGAATGGGCTTTGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS CCA 90 bp | CTTGGAGGCCCAGGAGAAGGTGAGGCACCCAGCTGTAGAACTGCCTaGGCTGGTGGGGACACCTGGGAGAGTGAATGCTCTGTTTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LGGPGEGEAPSCRTA*AGGDTWESECSVSE Trigger: CTCAGAAACAGAGCATTCACTCTCCCAGGTGTCCCCACCAGCCCAGGCAGTTCTACAGCTGGGTGCCTCACCTTCTCCTGGGCCTCCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS CCA 90 bp | AACCCTCCTTCTCCTCCAAGCATGTCCCACCATTGTGGCAGGGGCTaGGGATACAGTCACCTGATGAGGGAGCCACAGCCACTCCACCGT | + |
|
Preference number: 5 (lower is better) Translates to: NPPSPPSMSHHCGRG*GYSHLMREPQPLHR Trigger: ACGGTGGAGTGGCTGTGGCTCCCTCATCAGGTGACTGTATCCCCAGCCCCTGCCACAATGGTGGGACATGCTTGGAGGAGAAGGAGGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS CCA 90 bp | CTAGCGCTCGGCACTGACTTTCTGCCTCCTCCCAACTCCTTCGTGTaGAAAAGTGCTTGTAGCAGGCTCCCTGGAAGGCCTCCCAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LALGTDFLPPPNSFV*KSACSRLPGRPPSQ Trigger: CTGGCTGGGAGGCCTTCCAGGGAGCCTGCTACAAGCACTTTTCCACACGAAGGAGTTGGGAGGAGGCAGAAAGTCAGTGCCGAGCGCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS GCA 90 bp | CACCACGTTCCAGACAGTAGTCCCGAGCCTCCTCCCATGTCAGCTTaGTGGGAGGGGCGCCTAGGAACAGTTCTCCATTTAGGTCTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: HHVPDSSPEPPPMSA*WEGRLGTVLHLGLR Trigger: CCGAAGACCTAAATGGAGAACTGTTCCTAGGCGCCCCTCCCAGCAAGCTGACATGGGAGGAGGCTCGGGACTACTGTCTGGAACGTGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS TCA 90 bp | AGTTGCAGGGCACATCACTCCACTGTCCCTGGTCATGCCACACCATaGCCACACAGTTCTCCCCAGACAGGAAGTAGCTGTCAGGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SCRAHHSTVPGHATP*PHSSPQTGSSCQAA Trigger: GGCAGCCTGACAGCTACTTCCTGTCTGGGGAGAACTGTGTGGTCATGGTGTGGCATGACCAGGGACAGTGGAGTGATGTGCCCTGCAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR CAA 90 bp | ACGAAATCGAGGGACAAGGAGGCAGCTGACATGAGAGGGCAGTTGAGGCACTTAAAGAGGAAGAGGGTCTaGACTCCTGGCAGGCCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: TKSRDKEAADMRGQLRHLKRKRV*TPGRPP Trigger: GGGCGGCCTGCCAGGAGTCAAGACCCTCTTCCTCTT...TAAGTGCCTCAACTGCCCTCTCATGTCAGCTGCCTCCTTGTCCCTCGATTTCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS TCA 90 bp | CAGAGGAAGCAGAGGGATGGGCAGAGTCTCGGAAGCAGTAGACATTaGAGCGGTTCTGCTTGCTGGGGAAGCCAGTCTGGTTGGGAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: QRKQRDGQSLGSSRH*SGSACWGSQSGWER Trigger: TCTTTCCCAACCAGACTGGCTTCCCCAGCAAGCAGAACCGCTTCAATGTCTACTGCTTCCGAGACTCTGCCCATCCCTCTGCTTCCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR CAA 90 bp | ATGAGAGGGCAGTTGAGGCACTTAGGGACTTACCGGGTAAAACCTGAGGCCCTTACGACCCCTTTGACCTaGACCTCCACAGCATCACTG | + |
|
Preference number: 5 (lower is better) Translates to: MRGQLRHLGTYRVKPEALTTPLT*TSTASL Trigger: CAGTGATGCTGTGGAGGTCAAGGTCAAAGGGGTCGT...AAGGGCCTCAGGTTTTACCCGGTAAGTCCCTAAGTGCCTCAACTGCCCTCTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR CAA 90 bp | ACGAAATCGAGGGACAAGGAGGCAGCTGACATGAGAGGGCAGTTGAGGCACTTAAGGAAGACGACCCCTTaGACCTTGACCTCCACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TKSRDKEAADMRGQLRHLRKTTP*TLTSTA Trigger: TGCTGTGGAGGTCAAGGTCAAAGGGGTCGTCTTCCT...TAAGTGCCTCAACTGCCCTCTCATGTCAGCTGCCTCCTTGTCCCTCGATTTCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR CAA 90 bp | TCAGACAACTTTATTTCCACCTGGTTTTGCTGGTACTCCATCCTAAAAACTCTTGCGGTCCACGGACCCTaGGAGGCCCAGGAGAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SDNFISTWFCWYSILKTLAVHGP*EAQEKV Trigger: CACCTTCTCCTGGGCCTCCAAGGGTCCGTGGACCGC...AAGAGTTTTTAGGATGGAGTACCAGCAAAACCAGGTGGAAATAAAGTTGTCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR CAA 90 bp | TCAGACAACTTTATTTCCACCTGGTTTTGCTGGTACTCCATCCTAAAAACTCTTTCCTCCCATGTCAGCTaGCTGGGAGGGGCGCCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: SDNFISTWFCWYSILKTLSSHVS*LGGAPR Trigger: CCTAGGCGCCCCTCCCAGCAAGCTGACATGGGAGGA...AAGAGTTTTTAGGATGGAGTACCAGCAAAACCAGGTGGAAATAAAGTTGTCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR CAA 90 bp | CGAATAGCACAGTGTCCCCTAACGAAATCGAGGGACAAGGAGGCAGCTGACATGAGAGCCTCCAAGTCTTaGAATCTTTCTTCTTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RIAQCPLTKSRDKEAADMRASKS*NLSSSS Trigger: GGAGGAAGAAGAAAGATTCAAAGACTTGGAGGCTCT...CATGTCAGCTGCCTCCTTGTCCCTCGATTTCGTTAGGGGACACTGTGCTATTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR CAA 90 bp | TCAGACAACTTTATTTCCACCTGGTTTTGCTGGTACTCCATCCTAAAAACTCTTTTGAAGCGGTTCTGCTaGCTGGGGAAGCCAGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SDNFISTWFCWYSILKTLLKRFC*LGKPVW Trigger: CCAGACTGGCTTCCCCAGCAAGCAGAACCGCTTCAA...AAGAGTTTTTAGGATGGAGTACCAGCAAAACCAGGTGGAAATAAAGTTGTCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS-3UTR CAA 90 bp | TCAGACAACTTTATTTCCACCTGGTTTTGCTGGTACTCCATCCTAAAAACTCTTTCCCGGTATCGATCGTaGACAAAGTCTTGCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SDNFISTWFCWYSILKTLSRYRS*TKSCSS Trigger: TGAGGAGCAAGACTTTGTCAACGATCGATACCGGGA...AAGAGTTTTTAGGATGGAGTACCAGCAAAACCAGGTGGAAATAAAGTTGTCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
||
| CDS CCA 72 bp | GGCGCGGCCCGGCGACTGTGCGGCGGCCGCAGGTGGTaGACGTGGCATGGGATGGCCAGGGCACCGCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GAARRLCGGRRW*TWHGMARAPPS Trigger: GCTGGGCGGTGCCCTGGCCATCCCATGCCACGTCCACCACCTGCGGCCGCCGCACAGTCGCCGGGCCGCGCC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090971.11 ENSMUST00000194193.2 |
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| CDS CCA 72 bp | GCCCGGCGACTGTGCGGCGGCCGCAGGTGGTGGACGTaGCATGGGATGGCCAGGGCACCGCCCAGCACGCCC | + |
|
Preference number: 6 (lower is better) Translates to: ARRLCGGRRWWT*HGMARAPPSTP Trigger: GGGCGTGCTGGGCGGTGCCCTGGCCATCCCATGCCACGTCCACCACCTGCGGCCGCCGCACAGTCGCCGGGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090971.11 ENSMUST00000194193.2 |
||
| CDS CCA 72 bp | TGTGCGGCGGCCGCAGGTGGTGGACGTGGCATGGGATaGCCAGGGCACCGCCCAGCACGCCCCGCAGCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: CAAAAGGGRGMG*PGHRPARPAAA Trigger: CGCAGCTGCGGGGCGTGCTGGGCGGTGCCCTGGCCATCCCATGCCACGTCCACCACCTGCGGCCGCCGCACA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090971.11 ENSMUST00000194193.2 |
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| CDS GCA 72 bp | GGGATGGCCAGGGCACCGCCCAGCACGCCCCGCAGCTaGGTGGCACCGATGCGCACGCGGAAGGCTCGATCC | + |
|
Preference number: 6 (lower is better) Translates to: GMARAPPSTPRS*VAPMRTRKARS Trigger: GGATCGAGCCTTCCGCGTGCGCATCGGTGCCACGCAGCTGCGGGGCGTGCTGGGCGGTGCCCTGGCCATCCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090971.11 ENSMUST00000194193.2 |
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| CDS CCA 72 bp | TGGCCAGGGCACCGCCCAGCACGCCCCGCAGCTGCGTaGCACCGATGCGCACGCGGAAGGCTCGATCCTCCG | + |
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Preference number: 6 (lower is better) Translates to: WPGHRPARPAAA*HRCARGRLDPP Trigger: CGGAGGATCGAGCCTTCCGCGTGCGCATCGGTGCCACGCAGCTGCGGGGCGTGCTGGGCGGTGCCCTGGCCA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090971.11 ENSMUST00000194193.2 |
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| CDS GCA 72 bp | TTGACCCGGGGAAAACCCGGCGCGGCCCGGCGACTGTaGGGCGGCCGCAGGTGGTGGACGTGGCATGGGATG | + |
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Preference number: 6 (lower is better) Translates to: LTRGKPGAARRL*GGRRWWTWHGM Trigger: CATCCCATGCCACGTCCACCACCTGCGGCCGCCGCACAGTCGCCGGGCCGCGCCGGGTTTTCCCCGGGTCAA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090971.11 ENSMUST00000194193.2 |
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| CDS CCA 72 bp | CACCTGATGAGGGAGCCACAGCCACTCCACCGTGGCTaGCACTGTCGGTGGGCAGCACTGGCTGGGCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: HLMREPQPLHRG*HCRWAALAGPA Trigger: TGCAGGCCCAGCCAGTGCTGCCCACCGACAGTGCCAGCCACGGTGGAGTGGCTGTGGCTCCCTCATCAGGTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS CCA 72 bp | AGCCGCCGAGGTAGGCAGCATAGAGCTGCTCCGGGGTaGCGATTCGGGCTCCTATGCGAGCGCAGGCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: SRRGRQHRAAPG*RFGLLCERRLP Trigger: AGGAAGCCTGCGCTCGCATAGGAGCCCGAATCGCCACCCCGGAGCAGCTCTATGCTGCCTACCTCGGCGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS TCA 72 bp | AGAGCACGGCCAGGCCTCCGGGGTACACAGGAAATCTaGGGGGCCTCCCAAAGCCCATTCTCCTGGCAGCGG | + |
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Preference number: 6 (lower is better) Translates to: RARPGLRGTQEI*GASQSPFSWQR Trigger: CCGCTGCCAGGAGAATGGGCTTTGGGAGGCCCCTCAGATTTCCTGTGTACCCCGGAGGCCTGGCCGTGCTCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS TCA 72 bp | GCAGCGCCACGCGGAACCGGTAGGCTTCGTTTACCTTaGCGCGCAGCCCACGAGCCACCAGTACCTCTACCT | + |
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Preference number: 6 (lower is better) Translates to: AAPRGTGRLRLP*RAAHEPPVPLP Trigger: AGGTAGAGGTACTGGTGGCTCGTGGGCTGCGCGTCAAGGTAAACGAAGCCTACCGGTTCCGCGTGGCGCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS TCA 72 bp | GGAAGCCAGTCTGGTTGGGAAAGAGGAAGAGGGTCTTaGCTCCTGGCAGGCCGCCCCCACAGCGTTGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: GSQSGWERGRGS*LLAGRPHSVGW Trigger: CCAGCCAACGCTGTGGGGGCGGCCTGCCAGGAGTCAAGACCCTCTTCCTCTTTCCCAACCAGACTGGCTTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS GCA 72 bp | CATAGAGCTGCTCCGGGGTGGCGATTCGGGCTCCTATaGGAGCGCAGGCTTCCTGGGCTCCAGCAAAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: HRAAPGWRFGLL*ERRLPGLQQRR Trigger: TCTCCTTTGCTGGAGCCCAGGAAGCCTGCGCTCGCATAGGAGCCCGAATCGCCACCCCGGAGCAGCTCTATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS CCA 72 bp | AGTCTGGTTGGGAAAGAGGAAGAGGGTCTTGACTCCTaGCAGGCCGCCCCCACAGCGTTGGCTGGGTGTGAT | + |
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Preference number: 6 (lower is better) Translates to: SLVGKEEEGLDS*QAAPTALAGCD Trigger: ATCACACCCAGCCAACGCTGTGGGGGCGGCCTGCCAGGAGTCAAGACCCTCTTCCTCTTTCCCAACCAGACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS CCA 72 bp | CCATCCATGTCTCCAGAGCAGGCCTCTCGTGGGTTCTaGATGGGGTACCTCACAGTTTGGTCGGACAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: PSMSPEQASRGF*MGYLTVWSDSQ Trigger: CTGGCTGTCCGACCAAACTGTGAGGTACCCCATCCAGAACCCACGAGAGGCCTGCTCTGGAGACATGGATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS CCA 72 bp | CATCTGTCCAGGCCACCATTCCAGGCTGCGTACAGCTaGCCTGTGCTAGCGATCTGTGCACCACGTTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: HLSRPPFQAAYS*PVLAICAPRSR Trigger: TCTGGAACGTGGTGCACAGATCGCTAGCACAGGCCAGCTGTACGCAGCCTGGAATGGTGGCCTGGACAGATG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS CCA 72 bp | GTGCAATGGATTGGGTTTCCGATTCTAGCGGAGTCCTaGGGGCCTCTGCTGGGTCTTCTGGGGTGGAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: VQWIGFPILAES*GPLLGLLGWSF Trigger: GAAGCTCCACCCCAGAAGACCCAGCAGAGGCCCCCAGGACTCCGCTAGAATCGGAAACCCAATCCATTGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS GCA 72 bp | CCAGACAGTAGTCCCGAGCCTCCTCCCATGTCAGCTTaGTGGGAGGGGCGCCTAGGAACAGTTCTCCATTTA | + |
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Preference number: 6 (lower is better) Translates to: PDSSPEPPPMSA*WEGRLGTVLHL Trigger: TAAATGGAGAACTGTTCCTAGGCGCCCCTCCCAGCAAGCTGACATGGGAGGAGGCTCGGGACTACTGTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS TCA 72 bp | CAGAGGGATGGGCAGAGTCTCGGAAGCAGTAGACATTaGAGCGGTTCTGCTTGCTGGGGAAGCCAGTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: QRDGQSLGSSRH*SGSACWGSQSG Trigger: ACCAGACTGGCTTCCCCAGCAAGCAGAACCGCTTCAATGTCTACTGCTTCCGAGACTCTGCCCATCCCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS GCA 72 bp | GCTGTGGTGGAGGCCCACAGGACACAAGCCCCATCTTaGAGGTGTAGGATAGATGGTAGTTGCAGGGCACAT | + |
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Preference number: 6 (lower is better) Translates to: AVVEAHRTQAPS*RCRIDGSCRAH Trigger: ATGTGCCCTGCAACTACCATCTATCCTACACCTGCAAGATGGGGCTTGTGTCCTGTGGGCCTCCACCACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS CCA 72 bp | GGCACTGACTTTCTGCCTCCTCCCAACTCCTTCGTGTaGAAAAGTGCTTGTAGCAGGCTCCCTGGAAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: GTDFLPPPNSFV*KSACSRLPGRP Trigger: AGGCCTTCCAGGGAGCCTGCTACAAGCACTTTTCCACACGAAGGAGTTGGGAGGAGGCAGAAAGTCAGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS TCA 72 bp | GCACATCACTCCACTGTCCCTGGTCATGCCACACCATaGCCACACAGTTCTCCCCAGACAGGAAGTAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: AHHSTVPGHATP*PHSSPQTGSSC Trigger: ACAGCTACTTCCTGTCTGGGGAGAACTGTGTGGTCATGGTGTGGCATGACCAGGGACAGTGGAGTGATGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS GCA 72 bp | CAAGCCCCATCTTGCAGGTGTAGGATAGATGGTAGTTaGAGGGCACATCACTCCACTGTCCCTGGTCATGCC | + |
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Preference number: 6 (lower is better) Translates to: QAPSCRCRIDGS*RAHHSTVPGHA Trigger: GGCATGACCAGGGACAGTGGAGTGATGTGCCCTGCAACTACCATCTATCCTACACCTGCAAGATGGGGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS CAA 72 bp | CCACTGGTACTCCCGGTATCGATCGTTGACAAAGTCTaGCTCCTCAGGGGTGCAGATGCTGGTCAGATGAGC | + |
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Preference number: 6 (lower is better) Translates to: PLVLPVSIVDKV*LLRGADAGQMS Trigger: GCTCATCTGACCAGCATCTGCACCCCTGAGGAGCAAGACTTTGTCAACGATCGATACCGGGAGTACCAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS CAA 72 bp | TTGAGCCCAATCCACTGGTACTCCCGGTATCGATCGTaGACAAAGTCTTGCTCCTCAGGGGTGCAGATGCTG | + |
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Preference number: 6 (lower is better) Translates to: LSPIHWYSRYRS*TKSCSSGVQML Trigger: CAGCATCTGCACCCCTGAGGAGCAAGACTTTGTCAACGATCGATACCGGGAGTACCAGTGGATTGGGCTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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| CDS TCA 72 bp | TCTTTCTTCTTCCTCCAGGGCTACGCCTTCCTCTTCTaGGGACTCGGTAGGTGGTGCAATGGATTGGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: SFFFLQGYAFLF*GLGRWCNGLGF Trigger: GAAACCCAATCCATTGCACCACCTACCGAGTCCTCAGAAGAGGAAGGCGTAGCCCTGGAGGAAGAAGAAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090971.11 |
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