Pregenerated sensors for AZGP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037053Ensembl transcript IDs: ENSMUST00000035390.7, ENSMUST00000197571.2
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACTCAGTCTGTGGCATTCAAGTCTTCTGTGCCCATGCCTCTTCCTTaGATTCTTGCTGGCTGTTGTACAGTGGCCCATGGAAGACCTTGT | + |
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Preference number: 1 (lower is better) Translates to: TQSVAFKSSVPMPLP*ILAGCCTVAHGRPC Trigger: ACAAGGTCTTCCATGGGCCACTGTACAACAGCCAGCAAGAATCCAAGGAAGAGGCATGGGCACAGAAGACTTGAATGCCACAGACTGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035390.7 ENSMUST00000197571.2 |
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| 3UTR CCA 90 bp | GGCATTCAAGTCTTCTGTGCCCATGCCTCTTCCTTGGATTCTTGCTaGCTGTTGTACAGTGGCCCATGGAAGACCTTGTTGATGACATTG | + |
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Preference number: 1 (lower is better) Translates to: GIQVFCAHASSLDSC*LLYSGPWKTLLMTL Trigger: CAATGTCATCAACAAGGTCTTCCATGGGCCACTGTACAACAGCCAGCAAGAATCCAAGGAAGAGGCATGGGCACAGAAGACTTGAATGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035390.7 ENSMUST00000197571.2 |
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| 3UTR GCA 90 bp | TCTGACATTGAGAGTGAACTCAGTCTGTGGCATTCAAGTCTTCTGTaGCCATGCCTCTTCCTTGGATTCTTGCTGGCTGTTGTACAGTGG | + |
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Preference number: 1 (lower is better) Translates to: SDIESELSLWHSSLL*PCLFLGFLLAVVQW Trigger: CCACTGTACAACAGCCAGCAAGAATCCAAGGAAGAGGCATGGGCACAGAAGACTTGAATGCCACAGACTGAGTTCACTCTCAATGTCAGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035390.7 ENSMUST00000197571.2 |
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| 3UTR GCA 90 bp | CTATGTCCTGTGGGGAGACTTCCACCTCTGCCCAGGAGAGGTAAGTaGCATTTCCATTGGGAAAAACACCTCTTTCTGGTTCAAATGCTA | + |
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Preference number: 1 (lower is better) Translates to: LCPVGRLPPLPRRGK*HFHWEKHLFLVQML Trigger: TAGCATTTGAACCAGAAAGAGGTGTTTTTCCCAATGGAAATGGCACTTACCTCTCCTGGGCAGAGGTGGAAGTCTCCCCACAGGACATAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197571.2 |
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| 3UTR CCA 90 bp | GGGAGACTTCCACCTCTGCCCAGGAGAGGTAAGTGCCATTTCCATTaGGAAAAACACCTCTTTCTGGTTCAAATGCTAGCTTCTTGTTGG | + |
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Preference number: 1 (lower is better) Translates to: GRLPPLPRRGKCHFH*EKHLFLVQMLASCW Trigger: CCAACAAGAAGCTAGCATTTGAACCAGAAAGAGGTGTTTTTCCCAATGGAAATGGCACTTACCTCTCCTGGGCAGAGGTGGAAGTCTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197571.2 |
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| 3UTR CCA 90 bp | CATGCCTCTTCCTTGGATTCTTGCTGGCTGTTGTACAGTGGCCCATaGAAGACCTTGTTGATGACATTGACTTCTGAAGTTCACCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: HASSLDSCWLLYSGP*KTLLMTLTSEVHLS Trigger: AGAGAGGTGAACTTCAGAAGTCAATGTCATCAACAAGGTCTTCCATGGGCCACTGTACAACAGCCAGCAAGAATCCAAGGAAGAGGCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035390.7 ENSMUST00000197571.2 |
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| 3UTR GCA 90 bp | ATGATAAAATCAACTCACACTTCTCTAGCATCTCTGAGTTTAAAATaGCTTCCTTTCTGTGCTGTTCTAGGCATGAGGGCAATTGTGAGG | + |
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Preference number: 1 (lower is better) Translates to: MIKSTHTSLASLSLK*LPFCAVLGMRAIVR Trigger: CCTCACAATTGCCCTCATGCCTAGAACAGCACAGAAAGGAAGGCATTTTAAACTCAGAGATGCTAGAGAAGTGTGAGTTGATTTTATCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035390.7 ENSMUST00000197571.2 |
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| 3UTR CAA 90 bp | AACTCAGTCTGTGGCATTCAAGTCTTCTGTGCCCATGCCTCTTCCTaGGATTCTTGCTGGCTGTTGTACAGTGGCCCATGGAAGACCTTG | + |
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Preference number: 2 (lower is better) Translates to: NSVCGIQVFCAHASS*DSCWLLYSGPWKTL Trigger: CAAGGTCTTCCATGGGCCACTGTACAACAGCCAGCAAGAATCCAAGGAAGAGGCATGGGCACAGAAGACTTGAATGCCACAGACTGAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035390.7 ENSMUST00000197571.2 |
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| 3UTR-3UTR GCA 90 bp | GACTTCCACCTCTGCCCAGGAGAGGTAAGTGCCATTTCCATTGGGAAAAACACCATGCCTTCCTTTCTGTaGTGTTCTAGGCATGAGGGC | + |
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Preference number: 2 (lower is better) Translates to: DFHLCPGEVSAISIGKNTMPSFL*CSRHEG Trigger: GCCCTCATGCCTAGAACAGCACAGAAAGGAAGGCAT...GGTGTTTTTCCCAATGGAAATGGCACTTACCTCTCCTGGGCAGAGGTGGAAGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197571.2 |
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| 3UTR-3UTR GCA 90 bp | AGACTTCCACCTCTGCCCAGGAGAGGTAAGTGCCATTTCCATTGGGAAAAACACTCTTCCTTGGATTCTTaGTGGCTGTTGTACAGTGGC | + |
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Preference number: 2 (lower is better) Translates to: RLPPLPRRGKCHFHWEKHSSLDS*WLLYSG Trigger: GCCACTGTACAACAGCCAGCAAGAATCCAAGGAAGA...GTGTTTTTCCCAATGGAAATGGCACTTACCTCTCCTGGGCAGAGGTGGAAGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197571.2 |
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| 3UTR CAA 90 bp | TTGGATTCTTGCTGGCTGTTGTACAGTGGCCCATGGAAGACCTTGTaGATGACATTGACTTCTGAAGTTCACCTCTCTCATGTCAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: LDSCWLLYSGPWKTL*MTLTSEVHLSHVRQ Trigger: CTGCCTGACATGAGAGAGGTGAACTTCAGAAGTCAATGTCATCAACAAGGTCTTCCATGGGCCACTGTACAACAGCCAGCAAGAATCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035390.7 ENSMUST00000197571.2 |
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| 3UTR CAA 90 bp | TCCTTGGATTCTTGCTGGCTGTTGTACAGTGGCCCATGGAAGACCTaGTTGATGACATTGACTTCTGAAGTTCACCTCTCTCATGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: SLDSCWLLYSGPWKT*LMTLTSEVHLSHVR Trigger: CCTGACATGAGAGAGGTGAACTTCAGAAGTCAATGTCATCAACAAGGTCTTCCATGGGCCACTGTACAACAGCCAGCAAGAATCCAAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035390.7 ENSMUST00000197571.2 |
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| 3UTR-3UTR TCA 90 bp | AGACTTCCACCTCTGCCCAGGAGAGGTAAGTGCCATTTCCATTGGGAAAAACACACAAGGCAAGGCGATTaGTCTGACATTGAGAGTGAA | + |
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Preference number: 2 (lower is better) Translates to: RLPPLPRRGKCHFHWEKHTRQGD*SDIESE Trigger: TTCACTCTCAATGTCAGATCAATCGCCTTGCCTTGT...GTGTTTTTCCCAATGGAAATGGCACTTACCTCTCCTGGGCAGAGGTGGAAGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197571.2 |
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| 3UTR-3UTR CCA 90 bp | AGACTTCCACCTCTGCCCAGGAGAGGTAAGTGCCATTTCCATTGGGAAAAACACAGTGAACTCAGTCTGTaGCATTCAAGTCTTCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: RLPPLPRRGKCHFHWEKHSELSL*HSSLLC Trigger: GCACAGAAGACTTGAATGCCACAGACTGAGTTCACT...GTGTTTTTCCCAATGGAAATGGCACTTACCTCTCCTGGGCAGAGGTGGAAGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197571.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGGCCCATGGAAGACCTTGTTGATGACATTGACTTCTGAAGTTCACCTCTCTCTTCCCACTTTAGCTTaGTGTTTGCAGCTGCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: SGPWKTLLMTLTSEVHLSLPTLA*CLQLLG Trigger: ACCCAGCAGCTGCAAACACCAAGCTAAAGTGGGAAG...AGAGAGGTGAACTTCAGAAGTCAATGTCATCAACAAGGTCTTCCATGGGCCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197571.2 |
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| 3UTR-3UTR GCA 90 bp | GCATCTCTGAGTTTAAAATGCCTTCCTTTCTGTGCTGTTCTAGGCATGAGGGCACATTCAAGTCTTCTGTaGCCATGCCTCTTCCTTGGA | + |
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Preference number: 2 (lower is better) Translates to: ASLSLKCLPFCAVLGMRAHSSLL*PCLFLG Trigger: TCCAAGGAAGAGGCATGGGCACAGAAGACTTGAATG...TGCCCTCATGCCTAGAACAGCACAGAAAGGAAGGCATTTTAAACTCAGAGATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035390.7 ENSMUST00000197571.2 |
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| 3UTR-3UTR GCA 90 bp | CTAGCATCTCTGAGTTTAAAATGCCTTCCTTTCTGTGCTGTTCTAGGCATGAGGTCTTCCTTGGATTCTTaGTGGCTGTTGTACAGTGGC | + |
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Preference number: 2 (lower is better) Translates to: LASLSLKCLPFCAVLGMRSSLDS*WLLYSG Trigger: GCCACTGTACAACAGCCAGCAAGAATCCAAGGAAGA...CCTCATGCCTAGAACAGCACAGAAAGGAAGGCATTTTAAACTCAGAGATGCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035390.7 ENSMUST00000197571.2 |
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| 3UTR-3UTR GCA 90 bp | AGTTTAAAATGCCTTCCTTTCTGTGCTGTTCTAGGCATGAGGGCAATTGTGAGGAGTCTTCTGTGCCCATaGCTCTTCCTTGGATTCTTG | + |
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Preference number: 2 (lower is better) Translates to: SLKCLPFCAVLGMRAIVRSLLCP*LFLGFL Trigger: CAAGAATCCAAGGAAGAGGCATGGGCACAGAAGACT...CCTCACAATTGCCCTCATGCCTAGAACAGCACAGAAAGGAAGGCATTTTAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035390.7 ENSMUST00000197571.2 |
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| 3UTR-3UTR TCA 90 bp | TTTAAAATGCCTTCCTTTCTGTGCTGTTCTAGGCATGAGGGCAATTGTGAGGGTACAAGGCAAGGCGATTaGTCTGACATTGAGAGTGAA | + |
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Preference number: 2 (lower is better) Translates to: FKMPSFLCCSRHEGNCEGTRQGD*SDIESE Trigger: TTCACTCTCAATGTCAGATCAATCGCCTTGCCTTGT...ACCCTCACAATTGCCCTCATGCCTAGAACAGCACAGAAAGGAAGGCATTTTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035390.7 ENSMUST00000197571.2 |
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| 3UTR-3UTR GCA 90 bp | CCATTTCCATTGGGAAAAACACCTCTTTCTGGTTCAAATGCTAGCTTCTTGTTGAGTCTTCTGTGCCCATaGCTCTTCCTTGGATTCTTG | + |
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Preference number: 2 (lower is better) Translates to: PFPLGKTPLSGSNASFLLSLLCP*LFLGFL Trigger: CAAGAATCCAAGGAAGAGGCATGGGCACAGAAGACT...CAACAAGAAGCTAGCATTTGAACCAGAAAGAGGTGTTTTTCCCAATGGAAATGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197571.2 |
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| 3UTR CCA 72 bp | GTGATCTATGAGGCAGAAGAAGGGGTCTATGTCCTGTaGGGAGACTTCCACCTCTGCCCAGGAGAGGTAAGT | + |
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Preference number: 3 (lower is better) Translates to: VIYEAEEGVYVL*GDFHLCPGEVS Trigger: ACTTACCTCTCCTGGGCAGAGGTGGAAGTCTCCCCACAGGACATAGACCCCTTCTTCTGCCTCATAGATCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197571.2 |
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| 3UTR GCA 72 bp | CAAGTCTTCTGTGCCCATGCCTCTTCCTTGGATTCTTaGTGGCTGTTGTACAGTGGCCCATGGAAGACCTTG | + |
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Preference number: 3 (lower is better) Translates to: QVFCAHASSLDS*WLLYSGPWKTL Trigger: CAAGGTCTTCCATGGGCCACTGTACAACAGCCAGCAAGAATCCAAGGAAGAGGCATGGGCACAGAAGACTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035390.7 ENSMUST00000197571.2 |
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| 3UTR CCA 72 bp | GCCATAGGCCAGGCATTTGAATATTCTGTTTCCTCCTaGGATCACACGGCTGGTGATTGTCACAGTGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: AIGQAFEYSVSS*DHTAGDCHSGR Trigger: CCTCCCACTGTGACAATCACCAGCCGTGTGATCCCAGGAGGAAACAGAATATTCAAATGCCTGGCCTATGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197571.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGGTGAGATCGACTGTAGTTCAGGTACCTCTTCAGCATTTCAGGACACTCCTGGCCCATGGAAGACCTaGTTGATGACATTGACTTCT | + |
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Preference number: 3 (lower is better) Translates to: PGEIDCSSGTSSAFQDTPGPWKT*LMTLTS Trigger: AGAAGTCAATGTCATCAACAAGGTCTTCCATGGGCC...AGGAGTGTCCTGAAATGCTGAAGAGGTACCTGAACTACAGTCGATCTCACCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197571.2 |
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| 3UTR TCA 72 bp | TGGCCCATGGAAGACCTTGTTGATGACATTGACTTCTaGAGTTCACCTCTCTCATGTCAGGCAGAGAGGGTA | + |
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Preference number: 3 (lower is better) Translates to: WPMEDLVDDIDF*SSPLSCQAERV Trigger: TACCCTCTCTGCCTGACATGAGAGAGGTGAACTTCAGAAGTCAATGTCATCAACAAGGTCTTCCATGGGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035390.7 ENSMUST00000197571.2 |
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| 3UTR CCA 72 bp | CCACCTCTGCCCAGGAGAGGTAAGTGCCATTTCCATTaGGAAAAACACCTCTTTCTGGTTCAAATGCTAGCT | + |
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Preference number: 3 (lower is better) Translates to: PPLPRRGKCHFH*EKHLFLVQMLA Trigger: AGCTAGCATTTGAACCAGAAAGAGGTGTTTTTCCCAATGGAAATGGCACTTACCTCTCCTGGGCAGAGGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197571.2 |
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| 3UTR-3UTR CAA 90 bp | ATCTCTGAGTTTAAAATGCCTTCCTTTCTGTGCTGTTCTAGGCATGAGGGCAATGATTCTTGCTGGCTGTaGTACAGTGGCCCATGGAAG | + |
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Preference number: 3 (lower is better) Translates to: ISEFKMPSFLCCSRHEGNDSCWL*YSGPWK Trigger: CTTCCATGGGCCACTGTACAACAGCCAGCAAGAATC...ATTGCCCTCATGCCTAGAACAGCACAGAAAGGAAGGCATTTTAAACTCAGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035390.7 ENSMUST00000197571.2 |
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| 3UTR-3UTR CAA 90 bp | AGTGGCCCATGGAAGACCTTGTTGATGACATTGACTTCTGAAGTTCACCTCTCTCATCCTTTACTTTTCTaGTCCTATCCCACTGCACCG | + |
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Preference number: 3 (lower is better) Translates to: SGPWKTLLMTLTSEVHLSHPLLF*SYPTAP Trigger: CGGTGCAGTGGGATAGGACAAGAAAAGTAAAGGATG...AGAGAGGTGAACTTCAGAAGTCAATGTCATCAACAAGGTCTTCCATGGGCCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197571.2 |
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| 3UTR TCA 72 bp | CTGTGCTGTTCTAGGCATGAGGGCAATTGTGAGGGTTaGCAGATTAATCAAGGAGGAGGTTTACAAGGCAAG | + |
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Preference number: 3 (lower is better) Translates to: LCCSRHEGNCEG*QINQGGGLQGK Trigger: CTTGCCTTGTAAACCTCCTCCTTGATTAATCTGTCAACCCTCACAATTGCCCTCATGCCTAGAACAGCACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035390.7 ENSMUST00000197571.2 |
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| 3UTR-3UTR CAA 90 bp | ATCTCTGAGTTTAAAATGCCTTCCTTTCTGTGCTGTTCTAGGCATGAGGGCAATCTCTTCCTTGGATTCTaGCTGGCTGTTGTACAGTGG | + |
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Preference number: 3 (lower is better) Translates to: ISEFKMPSFLCCSRHEGNLFLGF*LAVVQW Trigger: CCACTGTACAACAGCCAGCAAGAATCCAAGGAAGAG...ATTGCCCTCATGCCTAGAACAGCACAGAAAGGAAGGCATTTTAAACTCAGAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035390.7 ENSMUST00000197571.2 |
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| 3UTR CCA 72 bp | TCCTTGGATTCTTGCTGGCTGTTGTACAGTGGCCCATaGAAGACCTTGTTGATGACATTGACTTCTGAAGTT | + |
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Preference number: 3 (lower is better) Translates to: SLDSCWLLYSGP*KTLLMTLTSEV Trigger: AACTTCAGAAGTCAATGTCATCAACAAGGTCTTCCATGGGCCACTGTACAACAGCCAGCAAGAATCCAAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035390.7 ENSMUST00000197571.2 |
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| 3UTR-3UTR CAA 90 bp | ATCTCTGAGTTTAAAATGCCTTCCTTTCTGTGCTGTTCTAGGCATGAGGGCAATGGCCCATGGAAGACCTaGTTGATGACATTGACTTCT | + |
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Preference number: 3 (lower is better) Translates to: ISEFKMPSFLCCSRHEGNGPWKT*LMTLTS Trigger: AGAAGTCAATGTCATCAACAAGGTCTTCCATGGGCC...ATTGCCCTCATGCCTAGAACAGCACAGAAAGGAAGGCATTTTAAACTCAGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035390.7 ENSMUST00000197571.2 |
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| 3UTR-3UTR CAA 90 bp | AGTTTAAAATGCCTTCCTTTCTGTGCTGTTCTAGGCATGAGGGCAATTGTGAGGCCATGGAAGACCTTGTaGATGACATTGACTTCTGAA | + |
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Preference number: 3 (lower is better) Translates to: SLKCLPFCAVLGMRAIVRPWKTL*MTLTSE Trigger: TTCAGAAGTCAATGTCATCAACAAGGTCTTCCATGG...CCTCACAATTGCCCTCATGCCTAGAACAGCACAGAAAGGAAGGCATTTTAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035390.7 ENSMUST00000197571.2 |
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| 3UTR-3UTR CAA 90 bp | GGTAAGTGCCATTTCCATTGGGAAAAACACCTCTTTCTGGTTCAAATGCTAGCTCCATGGAAGACCTTGTaGATGACATTGACTTCTGAA | + |
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Preference number: 3 (lower is better) Translates to: GKCHFHWEKHLFLVQMLAPWKTL*MTLTSE Trigger: TTCAGAAGTCAATGTCATCAACAAGGTCTTCCATGG...AGCTAGCATTTGAACCAGAAAGAGGTGTTTTTCCCAATGGAAATGGCACTTACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197571.2 |
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| 3UTR CAA 72 bp | CGTAGACCTTTTCTGCTTCCCACTTTAGCTTGGTGTTaGCAGCTGCTGGGTCTAAGGGGATCCAAGCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: RRPFLLPTLAWC*QLLGLRGSKLG Trigger: TCCCAGCTTGGATCCCCTTAGACCCAGCAGCTGCAAACACCAAGCTAAAGTGGGAAGCAGAAAAGGTCTACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197571.2 |
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| CDS-3UTR CCA 90 bp | GGTTTACAAGGCAAGGCGATTGATCTGACATTGAGAGTGAACTCAGTCTGTGGCTCCATTCCTTCCACCTaGCTCCAAGGTCCCACAGGC | + |
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Preference number: 4 (lower is better) Translates to: GLQGKAIDLTLRVNSVCGSIPST*LQGPTG Trigger: GCCTGTGGGACCTTGGAGCCAGGTGGAAGGAATGGA...GCCACAGACTGAGTTCACTCTCAATGTCAGATCAATCGCCTTGCCTTGTAAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035390.7 ENSMUST00000197571.2 |
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| 3UTR CAA 72 bp | TCAAGTCTTCTGTGCCCATGCCTCTTCCTTGGATTCTaGCTGGCTGTTGTACAGTGGCCCATGGAAGACCTT | + |
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Preference number: 4 (lower is better) Translates to: SSLLCPCLFLGF*LAVVQWPMEDL Trigger: AAGGTCTTCCATGGGCCACTGTACAACAGCCAGCAAGAATCCAAGGAAGAGGCATGGGCACAGAAGACTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035390.7 ENSMUST00000197571.2 |
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| CDS-3UTR TCA 90 bp | TCTCTCATGTCAGGCAGAGAGGGTAACTTACTGAGGCTGAGCTACAACATTGTTGCTGTTGCAGTCTCCTaGAAGACTGCAGGACCCAGA | + |
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Preference number: 4 (lower is better) Translates to: SLMSGREGNLLRLSYNIVAVAVS*KTAGPR Trigger: TCTGGGTCCTGCAGTCTTTCAGGAGACTGCAACAGC...AACAATGTTGTAGCTCAGCCTCAGTAAGTTACCCTCTCTGCCTGACATGAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197571.2 |
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| CDS-3UTR CCA 90 bp | CTAGCATCTCTGAGTTTAAAATGCCTTCCTTTCTGTGCTGTTCTAGGCATGAGGTCCATTCCTTCCACCTaGCTCCAAGGTCCCACAGGC | + |
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Preference number: 4 (lower is better) Translates to: LASLSLKCLPFCAVLGMRSIPST*LQGPTG Trigger: GCCTGTGGGACCTTGGAGCCAGGTGGAAGGAATGGA...CCTCATGCCTAGAACAGCACAGAAAGGAAGGCATTTTAAACTCAGAGATGCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035390.7 ENSMUST00000197571.2 |
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| CDS-3UTR TCA 90 bp | AGCATCTCTGAGTTTAAAATGCCTTCCTTTCTGTGCTGTTCTAGGCATGAGGGCAGAAGGCCTGGTCATTaGGAAATGCAGTGGCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: SISEFKMPSFLCCSRHEGRRPGH*EMQWLE Trigger: TTCAAGCCACTGCATTTCTCAATGACCAGGCCTTCT...GCCCTCATGCCTAGAACAGCACAGAAAGGAAGGCATTTTAAACTCAGAGATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035390.7 |
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| CDS-3UTR TCA 90 bp | GGTTTACAAGGCAAGGCGATTGATCTGACATTGAGAGTGAACTCAGTCTGTGGCCATAGGCCAGGCATTTaGATATTCTGTTTCCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: GLQGKAIDLTLRVNSVCGHRPGI*IFCFLL Trigger: CAGGAGGAAACAGAATATTCAAATGCCTGGCCTATG...GCCACAGACTGAGTTCACTCTCAATGTCAGATCAATCGCCTTGCCTTGTAAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035390.7 |
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| CDS-3UTR GCA 90 bp | GGTTTACAAGGCAAGGCGATTGATCTGACATTGAGAGTGAACTCAGTCTGTGGCTTGGCCTTGTTCCAGTaGAGACTAATTCTTTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: GLQGKAIDLTLRVNSVCGLALFQ*RLILCG Trigger: CCCACAAAGAATTAGTCTGCACTGGAACAAGGCCAA...GCCACAGACTGAGTTCACTCTCAATGTCAGATCAATCGCCTTGCCTTGTAAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035390.7 |
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| CDS-3UTR CCA 90 bp | CTAGCATCTCTGAGTTTAAAATGCCTTCCTTTCTGTGCTGTTCTAGGCATGAGGCTTCCCACTTTAGCTTaGTGTTTGCAGCTGCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: LASLSLKCLPFCAVLGMRLPTLA*CLQLLG Trigger: ACCCAGCAGCTGCAAACACCAAGCTAAAGTGGGAAG...CCTCATGCCTAGAACAGCACAGAAAGGAAGGCATTTTAAACTCAGAGATGCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035390.7 |
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| 3UTR CAA 72 bp | TGCTGGCTGTTGTACAGTGGCCCATGGAAGACCTTGTaGATGACATTGACTTCTGAAGTTCACCTCTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: CWLLYSGPWKTL*MTLTSEVHLSH Trigger: ATGAGAGAGGTGAACTTCAGAAGTCAATGTCATCAACAAGGTCTTCCATGGGCCACTGTACAACAGCCAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035390.7 ENSMUST00000197571.2 |
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| CDS-3UTR GCA 90 bp | AGTTTAAAATGCCTTCCTTTCTGTGCTGTTCTAGGCATGAGGGCAATTGTGAGGCCCAGGAGAGGTAAGTaGCATTTCCATTGGGAAAAA | + |
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Preference number: 4 (lower is better) Translates to: SLKCLPFCAVLGMRAIVRPRRGK*HFHWEK Trigger: TTTTTCCCAATGGAAATGGCACTTACCTCTCCTGGG...CCTCACAATTGCCCTCATGCCTAGAACAGCACAGAAAGGAAGGCATTTTAAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035390.7 |
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| CDS-3UTR CCA 90 bp | AGTTTAAAATGCCTTCCTTTCTGTGCTGTTCTAGGCATGAGGGCAATTGTGAGGCAGACTAATTCTTTGTaGGTAGAAGCCATAGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: SLKCLPFCAVLGMRAIVRQTNSL*VEAIGQ Trigger: CTGGCCTATGGCTTCTACCCACAAAGAATTAGTCTG...CCTCACAATTGCCCTCATGCCTAGAACAGCACAGAAAGGAAGGCATTTTAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035390.7 |
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| CDS-3UTR GCA 90 bp | GATAAAATCAACTCACACTTCTCTAGCATCTCTGAGTTTAAAATGCCTTCCTTTCTGCCTTCCCGCTGTTaGAGTCTCCTGAAAGACTGC | + |
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Preference number: 4 (lower is better) Translates to: DKINSHFSSISEFKMPSFLPSRC*SLLKDC Trigger: GCAGTCTTTCAGGAGACTGCAACAGCGGGAAGGCAG...AAAGGAAGGCATTTTAAACTCAGAGATGCTAGAGAAGTGTGAGTTGATTTTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197571.2 |
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| CDS-3UTR GCA 90 bp | GATAAAATCAACTCACACTTCTCTAGCATCTCTGAGTTTAAAATGCCTTCCTTTCTGCCTTCCCGCTGTTaGTGTTGTAGTGGAAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: DKINSHFSSISEFKMPSFLPSRC*CCSGRR Trigger: CCTTCTTCCACTACAACAGCAACAGCGGGAAGGCAG...AAAGGAAGGCATTTTAAACTCAGAGATGCTAGAGAAGTGTGAGTTGATTTTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035390.7 |
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| CDS-3UTR CCA 90 bp | TTTAAAATGCCTTCCTTTCTGTGCTGTTCTAGGCATGAGGGCAATTGTGAGGGTAAGTGCCATTTCCATTaGGAAAAACACCTCTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: FKMPSFLCCSRHEGNCEGKCHFH*EKHLFL Trigger: CAGAAAGAGGTGTTTTTCCCAATGGAAATGGCACTT...ACCCTCACAATTGCCCTCATGCCTAGAACAGCACAGAAAGGAAGGCATTTTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035390.7 |
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| CDS-3UTR TCA 90 bp | GATAAAATCAACTCACACTTCTCTAGCATCTCTGAGTTTAAAATGCCTTCCTTTCCTTGTAATAGTCCATaGTGTCTTTCAGGGTCACAA | + |
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Preference number: 4 (lower is better) Translates to: DKINSHFSSISEFKMPSFPCNSP*CLSGSQ Trigger: TTGTGACCCTGAAAGACATCATGGACTATTACAAGG...AAAGGAAGGCATTTTAAACTCAGAGATGCTAGAGAAGTGTGAGTTGATTTTATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035390.7 |
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| CDS-3UTR CAA 90 bp | TGGCTGTTGTACAGTGGCCCATGGAAGACCTTGTTGATGACATTGACTTCTGAACTGCACCGAGAGAGATaGGGAAAACCCCCTGTGATC | + |
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Preference number: 5 (lower is better) Translates to: WLLYSGPWKTLLMTLTSELHRER*GKPPVI Trigger: GATCACAGGGGGTTTTCCCAATCTCTCTCGGTGCAG...TTCAGAAGTCAATGTCATCAACAAGGTCTTCCATGGGCCACTGTACAACAGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035390.7 |
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| CDS-3UTR CAA 90 bp | AAATGCCTTCCTTTCTGTGCTGTTCTAGGCATGAGGGCAATTGTGAGGGTTGACACTTTAGCTTGGTGTTaGCAGCTGCTGGGTCTAAGG | + |
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Preference number: 5 (lower is better) Translates to: KCLPFCAVLGMRAIVRVDTLAWC*QLLGLR Trigger: CCTTAGACCCAGCAGCTGCAAACACCAAGCTAAAGT...GTCAACCCTCACAATTGCCCTCATGCCTAGAACAGCACAGAAAGGAAGGCATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035390.7 |
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| CDS-3UTR CAA 90 bp | TGGCATTCAAGTCTTCTGTGCCCATGCCTCTTCCTTGGATTCTTGCTGGCTGTTCATCCTTTACTTTTCTaGTCCTATCCCACTGCACCG | + |
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Preference number: 5 (lower is better) Translates to: WHSSLLCPCLFLGFLLAVHPLLF*SYPTAP Trigger: CGGTGCAGTGGGATAGGACAAGAAAAGTAAAGGATG...AACAGCCAGCAAGAATCCAAGGAAGAGGCATGGGCACAGAAGACTTGAATGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035390.7 |
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| CDS-3UTR CAA 90 bp | GCATCTCTGAGTTTAAAATGCCTTCCTTTCTGTGCTGTTCTAGGCATGAGGGCAAATGCTAGCTTCTTGTaGGCCTTGTTCCAGTGCAGA | + |
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Preference number: 5 (lower is better) Translates to: ASLSLKCLPFCAVLGMRANASFL*ALFQCR Trigger: TCTGCACTGGAACAAGGCCAACAAGAAGCTAGCATT...TGCCCTCATGCCTAGAACAGCACAGAAAGGAAGGCATTTTAAACTCAGAGATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035390.7 |
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| CDS-3UTR CAA 90 bp | TTCTGTGCTGTTCTAGGCATGAGGGCAATTGTGAGGGTTGACAGATTAATCAAGGAGAAATGCAGTGGCTaGAAACCTCGGAAAACCTTT | + |
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Preference number: 5 (lower is better) Translates to: FCAVLGMRAIVRVDRLIKEKCSG*KPRKTF Trigger: AAAGGTTTTCCGAGGTTTCAAGCCACTGCATTTCTC...CTTGATTAATCTGTCAACCCTCACAATTGCCCTCATGCCTAGAACAGCACAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035390.7 |
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| CDS-3UTR CAA 90 bp | ATGATAAAATCAACTCACACTTCTCTAGCATCTCTGAGTTTAAAATGCCTTCCTGTGCAGACTAATTCTTaGTGGGTAGAAGCCATAGGC | + |
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Preference number: 5 (lower is better) Translates to: MIKSTHTSLASLSLKCLPVQTNS*WVEAIG Trigger: GCCTATGGCTTCTACCCACAAAGAATTAGTCTGCAC...AGGAAGGCATTTTAAACTCAGAGATGCTAGAGAAGTGTGAGTTGATTTTATCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035390.7 |
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| CDS CAA 72 bp | TGGCTCCAAGGTCCCACAGGCTCTGCCTTCCCGCTGTaGCAGTCTCCTGAAAGACTGCAGGACCCAGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: WLQGPTGSAFPL*QSPERLQDPEG Trigger: TCCTTCTGGGTCCTGCAGTCTTTCAGGAGACTGCAACAGCGGGAAGGCAGAGCCTGTGGGACCTTGGAGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197571.2 |
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| CDS TCA 72 bp | TGGAAGAAGGCCTGGTCATTGAGAAATGCAGTGGCTTaGAACCTCGGAAAACCTTTGCTGGGTCTGGACAAC | + |
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Preference number: 6 (lower is better) Translates to: WKKAWSLRNAVA*NLGKPLLGLDN Trigger: GTTGTCCAGACCCAGCAAAGGTTTTCCGAGGTTTCAAGCCACTGCATTTCTCAATGACCAGGCCTTCTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035390.7 |
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| CDS CCA 72 bp | GAAATGCAGTGGCTTGAAACCTCGGAAAACCTTTGCTaGGTCTGGACAACCCGGTGTAGAGAAAGGTCAGAT | + |
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Preference number: 6 (lower is better) Translates to: EMQWLETSENLC*VWTTRCRERSD Trigger: ATCTGACCTTTCTCTACACCGGGTTGTCCAGACCCAGCAAAGGTTTTCCGAGGTTTCAAGCCACTGCATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035390.7 |
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| CDS CAA 72 bp | GTGGAAGAAGGCCTGGTCATTGAGAAATGCAGTGGCTaGAAACCTCGGAAAACCTTTGCTGGGTCTGGACAA | + |
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Preference number: 6 (lower is better) Translates to: VEEGLVIEKCSG*KPRKTFAGSGQ Trigger: TTGTCCAGACCCAGCAAAGGTTTTCCGAGGTTTCAAGCCACTGCATTTCTCAATGACCAGGCCTTCTTCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035390.7 |
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| CDS CCA 72 bp | CAGTGGCTTGAAACCTCGGAAAACCTTTGCTGGGTCTaGACAACCCGGTGTAGAGAAAGGTCAGATAATAAG | + |
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Preference number: 6 (lower is better) Translates to: QWLETSENLCWV*TTRCRERSDNK Trigger: CTTATTATCTGACCTTTCTCTACACCGGGTTGTCCAGACCCAGCAAAGGTTTTCCGAGGTTTCAAGCCACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035390.7 |
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