Pregenerated sensors for AURKC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070837Ensembl transcript IDs: ENSMUST00000086248.7, ENSMUST00000086248.8, ENSMUST00000207660.2, ENSMUST00000207660.3, ENSMUST00000207711.2, ENSMUST00000208049.2, ENSMUST00000208518.2
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | ACATCACTTCATAAAAGAGAAAACAAGCGAACCACATaGACTAACAAACAGAGCCTGGAGACCTTCCTGAAG | + |
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Preference number: 3 (lower is better) Translates to: TSLHKRENKRTT*TNKQSLETFLK Trigger: CTTCAGGAAGGTCTCCAGGCTCTGTTTGTTAGTGCATGTGGTTCGCTTGTTTTCTCTTTTATGAAGTGATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086248.7 ENSMUST00000207660.2 ENSMUST00000207711.2 ENSMUST00000208049.2 |
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| CDS-3UTR GCA 90 bp | GGAGACCTTCCTGAAGAAATACATAGGGATAGAGATGGACAGGGCTCAGGAAGATCCCTGACCCAGGGGTaGTTCAGGACCTGGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: GDLPEEIHRDRDGQGSGRSLTQG*FRTWAR Trigger: CCTGGCCCAGGTCCTGAAGCACCCCTGGGTCAGGGA...TCTTCCTGAGCCCTGTCCATCTCTATCCCTATGTATTTCTTCAGGAAGGTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207711.2 ENSMUST00000208049.2 |
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| CDS-3UTR GCA 90 bp | GGAGACCTTCCTGAAGAAATACATAGGGATAGAGATGGACAGGGCTCAGGAAGAGCCCAAATTTCCCCCTaGCCAGAGGACGCCCGATTT | + |
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Preference number: 4 (lower is better) Translates to: GDLPEEIHRDRDGQGSGRAQISP*PEDARF Trigger: AAATCGGGCGTCCTCTGGGCAGGGGGAAATTTGGGC...TCTTCCTGAGCCCTGTCCATCTCTATCCCTATGTATTTCTTCAGGAAGGTCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207711.2 ENSMUST00000208049.2 |
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| CDS-3UTR TCA 90 bp | CCTGGAGACCTTCCTGAAGAAATACATAGGGATAGAGATGGACAGGGCTCAGGAAGGGCCACGATGAAATaGTTTTCCTTGAGCCGAGCC | + |
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Preference number: 4 (lower is better) Translates to: PGDLPEEIHRDRDGQGSGRATMK*FSLSRA Trigger: GGCTCGGCTCAAGGAAAATCATTTCATCGTGGCCCT...TCCTGAGCCCTGTCCATCTCTATCCCTATGTATTTCTTCAGGAAGGTCTCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207711.2 ENSMUST00000208049.2 |
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| CDS-3UTR GCA 90 bp | CCTGGAGACCTTCCTGAAGAAATACATAGGGATAGAGATGGACAGGGCTCAGGAATGTCTCACTGGAGGTaGTGCTCTCAAAGGGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: PGDLPEEIHRDRDGQGSGMSHWR*CSQRVA Trigger: AGCCACCCTTTGAGAGCAGCACCTCCAGTGAGACAT...TCCTGAGCCCTGTCCATCTCTATCCCTATGTATTTCTTCAGGAAGGTCTCCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207711.2 ENSMUST00000208049.2 |
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| CDS-3UTR TCA 90 bp | CCTGGAGACCTTCCTGAAGAAATACATAGGGATAGAGATGGACAGGGCTCAGGAACATTGTCTTTCTCCTaGGAGAGGGGGTATGCACAG | + |
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Preference number: 4 (lower is better) Translates to: PGDLPEEIHRDRDGQGSGTLSFS*ERGYAQ Trigger: CTGTGCATACCCCCTCTCTCAGGAGAAAGACAATGT...TCCTGAGCCCTGTCCATCTCTATCCCTATGTATTTCTTCAGGAAGGTCTCCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207711.2 ENSMUST00000208049.2 |
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| CDS-3UTR GCA 90 bp | GAGACCTTCCTGAAGAAATACATAGGGATAGAGATGGACAGGGCTCAGGAAGACCTGAGAGAGGGGGTATaGACAGACCACCCAAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: ETFLKKYIGIEMDRAQEDLREGV*TDHPKS Trigger: AGACTTTGGGTGGTCTGTGCATACCCCCTCTCTCAG...GTCTTCCTGAGCCCTGTCCATCTCTATCCCTATGTATTTCTTCAGGAAGGTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207711.2 ENSMUST00000208049.2 |
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| CDS-3UTR GCA 90 bp | ACATCACTTCATAAAAGAGAAAACAAGCGAACCACATGCACTAACAAACAGAGCTCCCTGACCCAGGGGTaGTTCAGGACCTGGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: TSLHKRENKRTTCTNKQSSLTQG*FRTWAR Trigger: CCTGGCCCAGGTCCTGAAGCACCCCTGGGTCAGGGA...GCTCTGTTTGTTAGTGCATGTGGTTCGCTTGTTTTCTCTTTTATGAAGTGATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000207711.2 ENSMUST00000208049.2 |
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| CDS-3UTR GCA 90 bp | ATAAAAGAGAAAACAAGCGAACCACATGCACTAACAAACAGAGCCTGGAGACCTGCCCAAATTTCCCCCTaGCCAGAGGACGCCCGATTT | + |
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Preference number: 4 (lower is better) Translates to: IKEKTSEPHALTNRAWRPAQISP*PEDARF Trigger: AAATCGGGCGTCCTCTGGGCAGGGGGAAATTTGGGC...AGGTCTCCAGGCTCTGTTTGTTAGTGCATGTGGTTCGCTTGTTTTCTCTTTTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000207711.2 ENSMUST00000208049.2 |
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| CDS-3UTR TCA 90 bp | AAAAGAGAAAACAAGCGAACCACATGCACTAACAAACAGAGCCTGGAGACCTTCTCTTCACCTCACCATTaGGGCCCAGCAGGAGATTCT | + |
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Preference number: 4 (lower is better) Translates to: KRENKRTTCTNKQSLETFSSPHH*GPAGDS Trigger: AGAATCTCCTGCTGGGCCTCAATGGTGAGGTGAAGA...GAAGGTCTCCAGGCTCTGTTTGTTAGTGCATGTGGTTCGCTTGTTTTCTCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207711.2 ENSMUST00000208049.2 |
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| CDS-3UTR GCA 90 bp | AAAAGAGAAAACAAGCGAACCACATGCACTAACAAACAGAGCCTGGAGACCTTCATGTCTCACTGGAGGTaGTGCTCTCAAAGGGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: KRENKRTTCTNKQSLETFMSHWR*CSQRVA Trigger: AGCCACCCTTTGAGAGCAGCACCTCCAGTGAGACAT...GAAGGTCTCCAGGCTCTGTTTGTTAGTGCATGTGGTTCGCTTGTTTTCTCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207711.2 ENSMUST00000208049.2 |
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| CDS-3UTR TCA 90 bp | ATAAAAGAGAAAACAAGCGAACCACATGCACTAACAAACAGAGCCTGGAGACCTAGGGCCACGATGAAATaGTTTTCCTTGAGCCGAGCC | + |
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Preference number: 4 (lower is better) Translates to: IKEKTSEPHALTNRAWRPRATMK*FSLSRA Trigger: GGCTCGGCTCAAGGAAAATCATTTCATCGTGGCCCT...AGGTCTCCAGGCTCTGTTTGTTAGTGCATGTGGTTCGCTTGTTTTCTCTTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000207711.2 ENSMUST00000208049.2 |
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| CDS-3UTR GCA 90 bp | ATAAAAGAGAAAACAAGCGAACCACATGCACTAACAAACAGAGCCTGGAGACCTCTGAGAGAGGGGGTATaGACAGACCACCCAAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: IKEKTSEPHALTNRAWRPLREGV*TDHPKS Trigger: AGACTTTGGGTGGTCTGTGCATACCCCCTCTCTCAG...AGGTCTCCAGGCTCTGTTTGTTAGTGCATGTGGTTCGCTTGTTTTCTCTTTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000207711.2 ENSMUST00000208049.2 |
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| CDS-3UTR TCA 90 bp | TCACTTCATAAAAGAGAAAACAAGCGAACCACATGCACTAACAAACAGAGCCTGTCTTCACCTCACCATTaGGGCCCAGCAGGAGATTCT | + |
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Preference number: 4 (lower is better) Translates to: SLHKRENKRTTCTNKQSLSSPHH*GPAGDS Trigger: AGAATCTCCTGCTGGGCCTCAATGGTGAGGTGAAGA...CAGGCTCTGTTTGTTAGTGCATGTGGTTCGCTTGTTTTCTCTTTTATGAAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207711.2 ENSMUST00000208049.2 |
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| CDS-3UTR GCA 90 bp | ATAAAAGAGAAAACAAGCGAACCACATGCACTAACAAACAGAGCCTGGAGACCTAGCAGAGCACCCCAATaGACCACAGATCAACCATCT | + |
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Preference number: 4 (lower is better) Translates to: IKEKTSEPHALTNRAWRPSRAPQ*TTDQPS Trigger: AGATGGTTGATCTGTGGTGCATTGGGGTGCTCTGCT...AGGTCTCCAGGCTCTGTTTGTTAGTGCATGTGGTTCGCTTGTTTTCTCTTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000207711.2 ENSMUST00000208049.2 |
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| CDS-3UTR TCA 90 bp | CATCACTTCATAAAAGAGAAAACAAGCGAACCACATGCACTAACAAACAGAGCCGGCTTGATGTCCCTGTaGATCACCTTCTTCTCATGG | + |
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Preference number: 4 (lower is better) Translates to: HHFIKEKTSEPHALTNRAGLMSL*ITFFSW Trigger: CCATGAGAAGAAGGTGATTCACAGGGACATCAAGCC...GGCTCTGTTTGTTAGTGCATGTGGTTCGCTTGTTTTCTCTTTTATGAAGTGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207711.2 ENSMUST00000208049.2 |
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| CDS-3UTR TCA 90 bp | ATAAAAGAGAAAACAAGCGAACCACATGCACTAACAAACAGAGCCTGGAGACCTAGACCACCCAAAGTCTaGGATCTTCACCTCACCATT | + |
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Preference number: 4 (lower is better) Translates to: IKEKTSEPHALTNRAWRPRPPKV*DLHLTI Trigger: AATGGTGAGGTGAAGATCTCAGACTTTGGGTGGTCT...AGGTCTCCAGGCTCTGTTTGTTAGTGCATGTGGTTCGCTTGTTTTCTCTTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207711.2 ENSMUST00000208049.2 |
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| CDS-3UTR TCA 90 bp | CATCACTTCATAAAAGAGAAAACAAGCGAACCACATGCACTAACAAACAGAGCCACATTGTCTTTCTCCTaGGAGAGGGGGTATGCACAG | + |
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Preference number: 4 (lower is better) Translates to: HHFIKEKTSEPHALTNRATLSFS*ERGYAQ Trigger: CTGTGCATACCCCCTCTCTCAGGAGAAAGACAATGT...GGCTCTGTTTGTTAGTGCATGTGGTTCGCTTGTTTTCTCTTTTATGAAGTGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000207711.2 ENSMUST00000208049.2 |
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| CDS-3UTR TCA 90 bp | CATCACTTCATAAAAGAGAAAACAAGCGAACCACATGCACTAACAAACAGAGCCGTAGGTCAGGGCATCTaGCAACTCCTGTATTATCGT | + |
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Preference number: 4 (lower is better) Translates to: HHFIKEKTSEPHALTNRAVGQGI*QLLYYR Trigger: ACGATAATACAGGAGTTGTCAGATGCCCTGACCTAC...GGCTCTGTTTGTTAGTGCATGTGGTTCGCTTGTTTTCTCTTTTATGAAGTGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207711.2 ENSMUST00000208049.2 |
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| CDS-3UTR TCA 90 bp | TCACTTCATAAAAGAGAAAACAAGCGAACCACATGCACTAACAAACAGAGCCTGAGACCACCCAAAGTCTaGGATCTTCACCTCACCATT | + |
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Preference number: 4 (lower is better) Translates to: SLHKRENKRTTCTNKQSLRPPKV*DLHLTI Trigger: AATGGTGAGGTGAAGATCTCAGACTTTGGGTGGTCT...CAGGCTCTGTTTGTTAGTGCATGTGGTTCGCTTGTTTTCTCTTTTATGAAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207711.2 ENSMUST00000208049.2 |
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| CDS-3UTR TCA 90 bp | ACATCACTTCATAAAAGAGAAAACAAGCGAACCACATGCACTAACAAACAGAGCGTAGGTCAGGGCATCTaGCAACTCCTGTATTATCGT | + |
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Preference number: 4 (lower is better) Translates to: TSLHKRENKRTTCTNKQSVGQGI*QLLYYR Trigger: ACGATAATACAGGAGTTGTCAGATGCCCTGACCTAC...GCTCTGTTTGTTAGTGCATGTGGTTCGCTTGTTTTCTCTTTTATGAAGTGATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207711.2 ENSMUST00000208049.2 |
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| CDS CCA 90 bp | TCCTGGGCTCCTGCAGGTACTGATGAAGGAAACTTAAAATCCACCTaGCGGATGCGTCTGTATGTCTCACTGGAGGTGCTGCTCTCAAAG | + |
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Preference number: 5 (lower is better) Translates to: SWAPAGTDEGNLKST*RMRLYVSLEVLLSK Trigger: CTTTGAGAGCAGCACCTCCAGTGAGACATACAGACGCATCCGCCAGGTGGATTTTAAGTTTCCTTCATCAGTACCTGCAGGAGCCCAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086248.8 ENSMUST00000207660.3 ENSMUST00000207711.2 ENSMUST00000208049.2 |
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| CDS CCA 90 bp | TCTCATGGCAGTAGGTCAGGGCATCTGACAACTCCTGTATTATCGTaGCTGTACGCTGCTGGTCCAACTTCTGATGTCTCTGAAGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: SHGSRSGHLTTPVLS*LYAAGPTSDVSEAP Trigger: AGGAGCTTCAGAGACATCAGAAGTTGGACCAGCAGCGTACAGCCACGATAATACAGGAGTTGTCAGATGCCCTGACCTACTGCCATGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086248.8 ENSMUST00000207711.2 ENSMUST00000208049.2 ENSMUST00000208518.2 |
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| CDS-3UTR CAA 90 bp | GGAGACCTTCCTGAAGAAATACATAGGGATAGAGATGGACAGGGCTCAGGAAGACACTTCCCTGCGAAGTaGGTGCTCCAATCCCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: GDLPEEIHRDRDGQGSGRHFPAK*VLQSLL Trigger: AAGGAGGGATTGGAGCACCAACTTCGCAGGGAAGTG...TCTTCCTGAGCCCTGTCCATCTCTATCCCTATGTATTTCTTCAGGAAGGTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207711.2 ENSMUST00000208049.2 |
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| CDS-3UTR CAA 90 bp | TTCATAAAAGAGAAAACAAGCGAACCACATGCACTAACAAACAGAGCCTGGAGACACTTCCCTGCGAAGTaGGTGCTCCAATCCCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: FIKEKTSEPHALTNRAWRHFPAK*VLQSLL Trigger: AAGGAGGGATTGGAGCACCAACTTCGCAGGGAAGTG...TCTCCAGGCTCTGTTTGTTAGTGCATGTGGTTCGCTTGTTTTCTCTTTTATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207711.2 ENSMUST00000208049.2 |
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| CDS-3UTR CAA 90 bp | ATAAAAGAGAAAACAAGCGAACCACATGCACTAACAAACAGAGCCTGGAGACCTATCTTCACCTCACCATaGAGGCCCAGCAGGAGATTC | + |
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Preference number: 5 (lower is better) Translates to: IKEKTSEPHALTNRAWRPIFTSP*RPSRRF Trigger: GAATCTCCTGCTGGGCCTCAATGGTGAGGTGAAGAT...AGGTCTCCAGGCTCTGTTTGTTAGTGCATGTGGTTCGCTTGTTTTCTCTTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207711.2 ENSMUST00000208049.2 |
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| CDS-3UTR CAA 90 bp | CATCACTTCATAAAAGAGAAAACAAGCGAACCACATGCACTAACAAACAGAGCCATCTTCACCTCACCATaGAGGCCCAGCAGGAGATTC | + |
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Preference number: 5 (lower is better) Translates to: HHFIKEKTSEPHALTNRAIFTSP*RPSRRF Trigger: GAATCTCCTGCTGGGCCTCAATGGTGAGGTGAAGAT...GGCTCTGTTTGTTAGTGCATGTGGTTCGCTTGTTTTCTCTTTTATGAAGTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207711.2 ENSMUST00000208049.2 |
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| CDS-3UTR CAA 90 bp | ACATCACTTCATAAAAGAGAAAACAAGCGAACCACATGCACTAACAAACAGAGCTGGTACCTAAGAAGCTaGGAGATCAAGTCCTGGGCT | + |
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Preference number: 5 (lower is better) Translates to: TSLHKRENKRTTCTNKQSWYLRS*EIKSWA Trigger: AGCCCAGGACTTGATCTCCAAGCTTCTTAGGTACCA...GCTCTGTTTGTTAGTGCATGTGGTTCGCTTGTTTTCTCTTTTATGAAGTGATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207711.2 ENSMUST00000208049.2 |
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| CDS CCA 72 bp | AGTAGGTCAGGGCATCTGACAACTCCTGTATTATCGTaGCTGTACGCTGCTGGTCCAACTTCTGATGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: SRSGHLTTPVLS*LYAAGPTSDVS Trigger: AGAGACATCAGAAGTTGGACCAGCAGCGTACAGCCACGATAATACAGGAGTTGTCAGATGCCCTGACCTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086248.8 ENSMUST00000207711.2 ENSMUST00000208049.2 ENSMUST00000208518.2 |
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| CDS CCA 72 bp | GAAGGATGGTACCTAAGAAGCTTGGAGATCAAGTCCTaGGCTCCTGCAGGTACTGATGAAGGAAACTTAAAA | + |
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Preference number: 6 (lower is better) Translates to: EGWYLRSLEIKS*APAGTDEGNLK Trigger: TTTTAAGTTTCCTTCATCAGTACCTGCAGGAGCCCAGGACTTGATCTCCAAGCTTCTTAGGTACCATCCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086248.8 ENSMUST00000207660.3 ENSMUST00000207711.2 ENSMUST00000208049.2 |
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