Pregenerated sensors for ATP6V1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052459Ensembl transcript IDs: ENSMUST00000063661.13, ENSMUST00000114666.9, ENSMUST00000124102.8, ENSMUST00000137557.8, ENSMUST00000147025.2
Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAACCATGCCACCCTGGCCCCAAACTCCTACAGCAGTGGTTGTCCTaGGGCCGACTGCCTGCAGGCACTGCAGAGTGTCTGTGGTATTCT | + |
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Preference number: 1 (lower is better) Translates to: KPCHPGPKLLQQWLS*GRLPAGTAECLWYS Trigger: AGAATACCACAGACACTCTGCAGTGCCTGCAGGCAGTCGGCCCCAGGACAACCACTGCTGTAGGAGTTTGGGGCCAGGGTGGCATGGTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR TCA 90 bp | ATTACATCTGAAGTGTATACTGACAGCACTATCAGCTGGAGAGAGTaGACAGGGAGCTCGCTCGCCAAGCTCTCTGAAGCGAGCCTTATT | + |
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Preference number: 1 (lower is better) Translates to: ITSEVYTDSTISWRE*TGSSLAKLSEASLI Trigger: AATAAGGCTCGCTTCAGAGAGCTTGGCGAGCGAGCTCCCTGTTCACTCTCTCCAGCTGATAGTGCTGTCAGTATACACTTCAGATGTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR GCA 90 bp | CATCCACGGTATGGAGTTCTGGCCTTCCATTCCCAACAGAGTACATaGAGTAGTCCTGTTTACAGTTTACTGGAGATGAGGGAAGGGGTA | + |
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Preference number: 1 (lower is better) Translates to: HPRYGVLAFHSQQST*SSPVYSLLEMREGV Trigger: TACCCCTTCCCTCATCTCCAGTAAACTGTAAACAGGACTACTGCATGTACTCTGTTGGGAATGGAAGGCCAGAACTCCATACCGTGGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR CCA 90 bp | CAGACAGGTTTTGAAATCTTTCTCATCTCCGCTAGTCAGGGCTCCTaGATACGAAGCCACATTGGAAGCAAACCGATTAAGCAGCACCAC | + |
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Preference number: 1 (lower is better) Translates to: QTGFEIFLISASQGS*IRSHIGSKPIKQHH Trigger: GTGGTGCTGCTTAATCGGTTTGCTTCCAATGTGGCTTCGTATCCAGGAGCCCTGACTAGCGGAGATGAGAAAGATTTCAAAACCTGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR CCA 90 bp | GCTGAGTTGTTTCCTAAGTACCCATCCATCCACGGTATGGAGTTCTaGCCTTCCATTCCCAACAGAGTACATGCAGTAGTCCTGTTTACA | + |
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Preference number: 1 (lower is better) Translates to: AELFPKYPSIHGMEF*PSIPNRVHAVVLFT Trigger: TGTAAACAGGACTACTGCATGTACTCTGTTGGGAATGGAAGGCCAGAACTCCATACCGTGGATGGATGGGTACTTAGGAAACAACTCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR TCA 90 bp | GCACTGCAGAGTGTCTGTGGTATTCTAATCCCCATCCCACCACTCTaGGAAGCTTGTCTGACTAAGTCTGAGGAAAAGAATGGCTATGAT | + |
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Preference number: 1 (lower is better) Translates to: ALQSVCGILIPIPPL*EACLTKSEEKNGYD Trigger: ATCATAGCCATTCTTTTCCTCAGACTTAGTCAGACAAGCTTCTCAGAGTGGTGGGATGGGGATTAGAATACCACAGACACTCTGCAGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR TCA 90 bp | AGACTGCTATATTTTAACACATCCTTACTAAAGACGCACTATCAGTaGACAATCTCAAGTTCTACAGTGTGGGCAAAGGGAAAGTTACAG | + |
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Preference number: 1 (lower is better) Translates to: RLLYFNTSLLKTHYQ*TISSSTVWAKGKLQ Trigger: CTGTAACTTTCCCTTTGCCCACACTGTAGAACTTGAGATTGTTCACTGATAGTGCGTCTTTAGTAAGGATGTGTTAAAATATAGCAGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR GCA 90 bp | GTTCAGTCTTGCAAATGTCTGTTTGAAAAACAAATAGTTCCCAAGTaGCCCACAAAAATGGTCCTGATTGATACAAATAATTGGAACATT | + |
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Preference number: 1 (lower is better) Translates to: VQSCKCLFEKQIVPK*PTKMVLIDTNNWNI Trigger: AATGTTCCAATTATTTGTATCAATCAGGACCATTTTTGTGGGGCACTTGGGAACTATTTGTTTTTCAAACAGACATTTGCAAGACTGAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR-3UTR TCA 90 bp | GTGGTTGTCCTGGGGCCGACTGCCTGCAGGCACTGCAGAGTGTCTGTGGTATTCCCCATCCCACCACTCTaGGAAGCTTGTCTGACTAAG | + |
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Preference number: 2 (lower is better) Translates to: VVVLGPTACRHCRVSVVFPIPPL*EACLTK Trigger: CTTAGTCAGACAAGCTTCTCAGAGTGGTGGGATGGG...GAATACCACAGACACTCTGCAGTGCCTGCAGGCAGTCGGCCCCAGGACAACCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR-3UTR GCA 90 bp | AGGTTGCTGGTAGGTATAAGCAGACAGGTTTTGAAATCTTTCTCATCTCCGCTATGTCCTGGGGCCGACTaGCTGCAGGCACTGCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: RLLVGISRQVLKSFSSPLCPGAD*LQALQS Trigger: ACTCTGCAGTGCCTGCAGGCAGTCGGCCCCAGGACA...TAGCGGAGATGAGAAAGATTTCAAAACCTGTCTGCTTATACCTACCAGCAACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR-3UTR CCA 90 bp | GCAGGCACTGCAGAGTGTCTGTGGTATTCTAATCCCCATCCCACCACTCTGAGACGTATGAGCTTGCCGTaGAAGAGGGAAGAAATCACA | + |
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Preference number: 2 (lower is better) Translates to: AGTAECLWYSNPHPTTLRRMSLP*KREEIT Trigger: TGTGATTTCTTCCCTCTTCCACGGCAAGCTCATACG...TCTCAGAGTGGTGGGATGGGGATTAGAATACCACAGACACTCTGCAGTGCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR-3UTR TCA 90 bp | CGACTGCCTGCAGGCACTGCAGAGTGTCTGTGGTATTCTAATCCCCATCCCACCAAGTTACAAGTGGTCTaGCTACAAATGCTGAGTTGT | + |
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Preference number: 2 (lower is better) Translates to: RLPAGTAECLWYSNPHPTKLQVV*LQMLSC Trigger: ACAACTCAGCATTTGTAGTCAGACCACTTGTAACTT...GGTGGGATGGGGATTAGAATACCACAGACACTCTGCAGTGCCTGCAGGCAGTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR-3UTR CCA 90 bp | GTGGTTGTCCTGGGGCCGACTGCCTGCAGGCACTGCAGAGTGTCTGTGGTATTCGTATTTCCTGCAAAATaGTTACTCAACAAACCACTA | + |
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Preference number: 2 (lower is better) Translates to: VVVLGPTACRHCRVSVVFVFPAK*LLNKPL Trigger: TAGTGGTTTGTTGAGTAACCATTTTGCAGGAAATAC...GAATACCACAGACACTCTGCAGTGCCTGCAGGCAGTCGGCCCCAGGACAACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR-3UTR TCA 90 bp | ACAGTCTTAGAGCAAGGAAGAAAACACATCTCGAATCCAGGACAACAAAAACAAATCAGCTGGAGAGAGTaGACAGGGAGCTCGCTCGCC | + |
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Preference number: 2 (lower is better) Translates to: TVLEQGRKHISNPGQQKQISWRE*TGSSLA Trigger: GGCGAGCGAGCTCCCTGTTCACTCTCTCCAGCTGAT...TTGTTTTTGTTGTCCTGGATTCGAGATGTGTTTTCTTCCTTGCTCTAAGACTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR CAA 90 bp | TCTGATCACAAGCCTAGGTTGCTGGTAGGTATAAGCAGACAGGTTTaGAAATCTTTCTCATCTCCGCTAGTCAGGGCTCCTGGATACGAA | + |
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Preference number: 2 (lower is better) Translates to: SDHKPRLLVGISRQV*KSFSSPLVRAPGYE Trigger: TTCGTATCCAGGAGCCCTGACTAGCGGAGATGAGAAAGATTTCAAAACCTGTCTGCTTATACCTACCAGCAACCTAGGCTTGTGATCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR-3UTR GCA 90 bp | CCATATCTGTCAACAGTGTTCAATAATTGGAAGAATATCCTTCTTCAGCAGCAGACTGCCTGCAGGCACTaGAGAGTGTCTGTGGTATTC | + |
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Preference number: 2 (lower is better) Translates to: PYLSTVFNNWKNILLQQQTACRH*RVSVVF Trigger: GAATACCACAGACACTCTGCAGTGCCTGCAGGCAGT...CTGCTGCTGAAGAAGGATATTCTTCCAATTATTGAACACTGTTGACAGATATGG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR-3UTR CCA 90 bp | GCTTGTCTGACTAAGTCTGAGGAAAAGAATGGCTATGATGTGGATCACATTTTCCACGGTATGGAGTTCTaGCCTTCCATTCCCAACAGA | + |
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Preference number: 2 (lower is better) Translates to: ACLTKSEEKNGYDVDHIFHGMEF*PSIPNR Trigger: TCTGTTGGGAATGGAAGGCCAGAACTCCATACCGTG...GAAAATGTGATCCACATCATAGCCATTCTTTTCCTCAGACTTAGTCAGACAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR-3UTR CCA 90 bp | CCATATCTGTCAACAGTGTTCAATAATTGGAAGAATATCCTTCTTCAGCAGCAGAAAACCATGCCACCCTaGCCCCAAACTCCTACAGCA | + |
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Preference number: 2 (lower is better) Translates to: PYLSTVFNNWKNILLQQQKTMPP*PQTPTA Trigger: TGCTGTAGGAGTTTGGGGCCAGGGTGGCATGGTTTT...CTGCTGCTGAAGAAGGATATTCTTCCAATTATTGAACACTGTTGACAGATATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR-3UTR CCA 90 bp | ATTGGTAAACTTGCTGTTTTCAGAATGTCAACAGGCAAACAAACACGTGACACGACTGCAGAGTGTCTGTaGTATTCTAATCCCCATCCC | + |
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Preference number: 2 (lower is better) Translates to: IGKLAVFRMSTGKQTRDTTAECL*YSNPHP Trigger: GGGATGGGGATTAGAATACCACAGACACTCTGCAGT...CGTGTCACGTGTTTGTTTGCCTGTTGACATTCTGAAAACAGCAAGTTTACCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR-3UTR TCA 90 bp | GCCAAGCTCTCTGAAGCGAGCCTTATTAAGCAAGTATGGGAATTATTATTTAAAGGAAGGAAGCTGCTGTaGCCAGATACCTTTGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: AKLSEASLIKQVWELLFKGRKLL*PDTFEK Trigger: CTTCTCAAAGGTATCTGGTCACAGCAGCTTCCTTCC...TTTAAATAATAATTCCCATACTTGCTTAATAAGGCTCGCTTCAGAGAGCTTGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR-3UTR TCA 90 bp | AGGTTGCTGGTAGGTATAAGCAGACAGGTTTTGAAATCTTTCTCATCTCCGCTAAAGTTACAAGTGGTCTaGCTACAAATGCTGAGTTGT | + |
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Preference number: 2 (lower is better) Translates to: RLLVGISRQVLKSFSSPLKLQVV*LQMLSC Trigger: ACAACTCAGCATTTGTAGTCAGACCACTTGTAACTT...TAGCGGAGATGAGAAAGATTTCAAAACCTGTCTGCTTATACCTACCAGCAACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR-3UTR TCA 90 bp | ATTGGTAAACTTGCTGTTTTCAGAATGTCAACAGGCAAACAAACACGTGACACGTCTGAGAAGCTTGTCTaGCTAAGTCTGAGGAAAAGA | + |
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Preference number: 2 (lower is better) Translates to: IGKLAVFRMSTGKQTRDTSEKLV*LSLRKR Trigger: TCTTTTCCTCAGACTTAGTCAGACAAGCTTCTCAGA...CGTGTCACGTGTTTGTTTGCCTGTTGACATTCTGAAAACAGCAAGTTTACCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR-3UTR GCA 90 bp | GCTTGTCTGACTAAGTCTGAGGAAAAGAATGGCTATGATGTGGATCACATTTTCTCCCAACAGAGTACATaGAGTAGTCCTGTTTACAGT | + |
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Preference number: 2 (lower is better) Translates to: ACLTKSEEKNGYDVDHIFSQQST*SSPVYS Trigger: ACTGTAAACAGGACTACTGCATGTACTCTGTTGGGA...GAAAATGTGATCCACATCATAGCCATTCTTTTCCTCAGACTTAGTCAGACAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR-3UTR CCA 90 bp | CAGAAAGTATTTTCTGCAATTGGTAAACTTGCTGTTTTCAGAATGTCAACAGGCCGTATGAGCTTGCCGTaGAAGAGGGAAGAAATCACA | + |
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Preference number: 2 (lower is better) Translates to: QKVFSAIGKLAVFRMSTGRMSLP*KREEIT Trigger: TGTGATTTCTTCCCTCTTCCACGGCAAGCTCATACG...GCCTGTTGACATTCTGAAAACAGCAAGTTTACCAATTGCAGAAAATACTTTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR-3UTR CCA 90 bp | ATTGGTAAACTTGCTGTTTTCAGAATGTCAACAGGCAAACAAACACGTGACACGCAAAGCTGCACAATATaGAAGCTAAGGGTTGGAGAT | + |
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Preference number: 2 (lower is better) Translates to: IGKLAVFRMSTGKQTRDTQSCTI*KLRVGD Trigger: ATCTCCAACCCTTAGCTTCCATATTGTGCAGCTTTG...CGTGTCACGTGTTTGTTTGCCTGTTGACATTCTGAAAACAGCAAGTTTACCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR-3UTR GCA 90 bp | CAGAAAGTATTTTCTGCAATTGGTAAACTTGCTGTTTTCAGAATGTCAACAGGCCAAATAGTTCCCAAGTaGCCCACAAAAATGGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: QKVFSAIGKLAVFRMSTGQIVPK*PTKMVL Trigger: CAGGACCATTTTTGTGGGGCACTTGGGAACTATTTG...GCCTGTTGACATTCTGAAAACAGCAAGTTTACCAATTGCAGAAAATACTTTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR-3UTR GCA 90 bp | GCCAAGCTCTCTGAAGCGAGCCTTATTAAGCAAGTATGGGAATTATTATTTAAATCCCAACAGAGTACATaGAGTAGTCCTGTTTACAGT | + |
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Preference number: 2 (lower is better) Translates to: AKLSEASLIKQVWELLFKSQQST*SSPVYS Trigger: ACTGTAAACAGGACTACTGCATGTACTCTGTTGGGA...TTTAAATAATAATTCCCATACTTGCTTAATAAGGCTCGCTTCAGAGAGCTTGGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR-3UTR CCA 90 bp | GCCAAGCTCTCTGAAGCGAGCCTTATTAAGCAAGTATGGGAATTATTATTTAAACAAAGCTGCACAATATaGAAGCTAAGGGTTGGAGAT | + |
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Preference number: 2 (lower is better) Translates to: AKLSEASLIKQVWELLFKQSCTI*KLRVGD Trigger: ATCTCCAACCCTTAGCTTCCATATTGTGCAGCTTTG...TTTAAATAATAATTCCCATACTTGCTTAATAAGGCTCGCTTCAGAGAGCTTGGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR-3UTR CCA 90 bp | CAGAAAGTATTTTCTGCAATTGGTAAACTTGCTGTTTTCAGAATGTCAACAGGCGTATTTCCTGCAAAATaGTTACTCAACAAACCACTA | + |
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Preference number: 2 (lower is better) Translates to: QKVFSAIGKLAVFRMSTGVFPAK*LLNKPL Trigger: TAGTGGTTTGTTGAGTAACCATTTTGCAGGAAATAC...GCCTGTTGACATTCTGAAAACAGCAAGTTTACCAATTGCAGAAAATACTTTCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR CCA 72 bp | AAACCATGCCACCCTGGCCCCAAACTCCTACAGCAGTaGTTGTCCTGGGGCCGACTGCCTGCAGGCACTGCA | + |
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Preference number: 3 (lower is better) Translates to: KPCHPGPKLLQQ*LSWGRLPAGTA Trigger: TGCAGTGCCTGCAGGCAGTCGGCCCCAGGACAACCACTGCTGTAGGAGTTTGGGGCCAGGGTGGCATGGTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR CCA 72 bp | TGGGGCCGACTGCCTGCAGGCACTGCAGAGTGTCTGTaGTATTCTAATCCCCATCCCACCACTCTGAGAAGC | + |
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Preference number: 3 (lower is better) Translates to: WGRLPAGTAECL*YSNPHPTTLRS Trigger: GCTTCTCAGAGTGGTGGGATGGGGATTAGAATACCACAGACACTCTGCAGTGCCTGCAGGCAGTCGGCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR TCA 72 bp | GAAGTGTATACTGACAGCACTATCAGCTGGAGAGAGTaGACAGGGAGCTCGCTCGCCAAGCTCTCTGAAGCG | + |
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Preference number: 3 (lower is better) Translates to: EVYTDSTISWRE*TGSSLAKLSEA Trigger: CGCTTCAGAGAGCTTGGCGAGCGAGCTCCCTGTTCACTCTCTCCAGCTGATAGTGCTGTCAGTATACACTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR-3UTR CAA 90 bp | GCAGGCACTGCAGAGTGTCTGTGGTATTCTAATCCCCATCCCACCACTCTGAGATATACACGTATGAGCTaGCCGTGGAAGAGGGAAGAA | + |
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Preference number: 3 (lower is better) Translates to: AGTAECLWYSNPHPTTLRYTRMS*PWKREE Trigger: TTCTTCCCTCTTCCACGGCAAGCTCATACGTGTATA...TCTCAGAGTGGTGGGATGGGGATTAGAATACCACAGACACTCTGCAGTGCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR-3UTR CAA 90 bp | GCAGGCACTGCAGAGTGTCTGTGGTATTCTAATCCCCATCCCACCACTCTGAGAACTACAAATGCTGAGTaGTTTCCTAAGTACCCATCC | + |
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Preference number: 3 (lower is better) Translates to: AGTAECLWYSNPHPTTLRTTNAE*FPKYPS Trigger: GGATGGGTACTTAGGAAACAACTCAGCATTTGTAGT...TCTCAGAGTGGTGGGATGGGGATTAGAATACCACAGACACTCTGCAGTGCCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR CCA 72 bp | TTTCCTAAGTACCCATCCATCCACGGTATGGAGTTCTaGCCTTCCATTCCCAACAGAGTACATGCAGTAGTC | + |
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Preference number: 3 (lower is better) Translates to: FPKYPSIHGMEF*PSIPNRVHAVV Trigger: GACTACTGCATGTACTCTGTTGGGAATGGAAGGCCAGAACTCCATACCGTGGATGGATGGGTACTTAGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR CCA 72 bp | CTGAGTTGTTTCCTAAGTACCCATCCATCCACGGTATaGAGTTCTGGCCTTCCATTCCCAACAGAGTACATG | + |
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Preference number: 3 (lower is better) Translates to: LSCFLSTHPSTV*SSGLPFPTEYM Trigger: CATGTACTCTGTTGGGAATGGAAGGCCAGAACTCCATACCGTGGATGGATGGGTACTTAGGAAACAACTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR TCA 72 bp | TGCTGTTTTCAGAATGTCAACAGGCAAACAAACACGTaGCACGTGTACCTTGTGAAAACCATGCCACCCTGG | + |
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Preference number: 3 (lower is better) Translates to: CCFQNVNRQTNT*HVYLVKTMPPW Trigger: CCAGGGTGGCATGGTTTTCACAAGGTACACGTGTCACGTGTTTGTTTGCCTGTTGACATTCTGAAAACAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR GCA 72 bp | TATGGAGTTCTGGCCTTCCATTCCCAACAGAGTACATaGAGTAGTCCTGTTTACAGTTTACTGGAGATGAGG | + |
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Preference number: 3 (lower is better) Translates to: YGVLAFHSQQST*SSPVYSLLEMR Trigger: CCTCATCTCCAGTAAACTGTAAACAGGACTACTGCATGTACTCTGTTGGGAATGGAAGGCCAGAACTCCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR CCA 72 bp | TTTGAAATCTTTCTCATCTCCGCTAGTCAGGGCTCCTaGATACGAAGCCACATTGGAAGCAAACCGATTAAG | + |
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Preference number: 3 (lower is better) Translates to: FEIFLISASQGS*IRSHIGSKPIK Trigger: CTTAATCGGTTTGCTTCCAATGTGGCTTCGTATCCAGGAGCCCTGACTAGCGGAGATGAGAAAGATTTCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR TCA 72 bp | AGTGTCTGTGGTATTCTAATCCCCATCCCACCACTCTaGGAAGCTTGTCTGACTAAGTCTGAGGAAAAGAAT | + |
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Preference number: 3 (lower is better) Translates to: SVCGILIPIPPL*EACLTKSEEKN Trigger: ATTCTTTTCCTCAGACTTAGTCAGACAAGCTTCTCAGAGTGGTGGGATGGGGATTAGAATACCACAGACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR TCA 72 bp | TCAAGTTCTACAGTGTGGGCAAAGGGAAAGTTACAGTaGAAATCTGGGCATTGTTTCTGTAGCCTCTTCACA | + |
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Preference number: 3 (lower is better) Translates to: SSSTVWAKGKLQ*KSGHCFCSLFT Trigger: TGTGAAGAGGCTACAGAAACAATGCCCAGATTTTCACTGTAACTTTCCCTTTGCCCACACTGTAGAACTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR-3UTR CAA 90 bp | AGGTTGCTGGTAGGTATAAGCAGACAGGTTTTGAAATCTTTCTCATCTCCGCTAACTACAAATGCTGAGTaGTTTCCTAAGTACCCATCC | + |
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Preference number: 3 (lower is better) Translates to: RLLVGISRQVLKSFSSPLTTNAE*FPKYPS Trigger: GGATGGGTACTTAGGAAACAACTCAGCATTTGTAGT...TAGCGGAGATGAGAAAGATTTCAAAACCTGTCTGCTTATACCTACCAGCAACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR-3UTR CAA 90 bp | CAGAAAGTATTTTCTGCAATTGGTAAACTTGCTGTTTTCAGAATGTCAACAGGCTATACACGTATGAGCTaGCCGTGGAAGAGGGAAGAA | + |
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Preference number: 3 (lower is better) Translates to: QKVFSAIGKLAVFRMSTGYTRMS*PWKREE Trigger: TTCTTCCCTCTTCCACGGCAAGCTCATACGTGTATA...GCCTGTTGACATTCTGAAAACAGCAAGTTTACCAATTGCAGAAAATACTTTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR-3UTR CAA 90 bp | CCATATCTGTCAACAGTGTTCAATAATTGGAAGAATATCCTTCTTCAGCAGCAGTGTGACCAGATACCTTaGAGAAGCTTTCTGAGCATG | + |
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Preference number: 3 (lower is better) Translates to: PYLSTVFNNWKNILLQQQCDQIP*RSFLSM Trigger: CATGCTCAGAAAGCTTCTCAAAGGTATCTGGTCACA...CTGCTGCTGAAGAAGGATATTCTTCCAATTATTGAACACTGTTGACAGATATGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| 3UTR TCA 72 bp | ATGGTTACTCAACAAACCACTAAGTTACAAGTGGTCTaGCTACAAATGCTGAGTTGTTTCCTAAGTACCCAT | + |
|
Preference number: 3 (lower is better) Translates to: MVTQQTTKLQVV*LQMLSCFLSTH Trigger: ATGGGTACTTAGGAAACAACTCAGCATTTGTAGTCAGACCACTTGTAACTTAGTGGTTTGTTGAGTAACCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| 3UTR TCA 72 bp | TATTTTAACACATCCTTACTAAAGACGCACTATCAGTaGACAATCTCAAGTTCTACAGTGTGGGCAAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: YFNTSLLKTHYQ*TISSSTVWAKG Trigger: TCCCTTTGCCCACACTGTAGAACTTGAGATTGTTCACTGATAGTGCGTCTTTAGTAAGGATGTGTTAAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| 3UTR CCA 72 bp | TTGCATAATCCATATCTGTCAACAGTGTTCAATAATTaGAAGAATATCCTTCTTCAGCAGCAGTCCACTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LHNPYLSTVFNN*KNILLQQQSTV Trigger: CACAGTGGACTGCTGCTGAAGAAGGATATTCTTCCAATTATTGAACACTGTTGACAGATATGGATTATGCAA 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| 3UTR CCA 72 bp | AAACACATCTCGAATCCAGGACAACAAAAACAAACTTaGTCAAGTAGTTTCTTGGGATCATTCATTCTGATC | + |
|
Preference number: 3 (lower is better) Translates to: KHISNPGQQKQT*SSSFLGSFILI Trigger: GATCAGAATGAATGATCCCAAGAAACTACTTGACCAAGTTTGTTTTTGTTGTCCTGGATTCGAGATGTGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| 3UTR GCA 72 bp | TGCAAATGTCTGTTTGAAAAACAAATAGTTCCCAAGTaGCCCACAAAAATGGTCCTGATTGATACAAATAAT | + |
|
Preference number: 3 (lower is better) Translates to: CKCLFEKQIVPK*PTKMVLIDTNN Trigger: ATTATTTGTATCAATCAGGACCATTTTTGTGGGGCACTTGGGAACTATTTGTTTTTCAAACAGACATTTGCA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| 3UTR CAA 72 bp | CCATGCCACCCTGGCCCCAAACTCCTACAGCAGTGGTaGTCCTGGGGCCGACTGCCTGCAGGCACTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PCHPGPKLLQQW*SWGRLPAGTAE Trigger: CTCTGCAGTGCCTGCAGGCAGTCGGCCCCAGGACAACCACTGCTGTAGGAGTTTGGGGCCAGGGTGGCATGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR CCA 90 bp | CGACTGCCTGCAGGCACTGCAGAGTGTCTGTGGTATTCTAATCCCCATCCCACCTGTCACTCTGGGCAGTaGTCTCCACAGCTCGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: RLPAGTAECLWYSNPHPTCHSGQ*SPQLGG Trigger: CCCGCCGAGCTGTGGAGACCACTGCCCAGAGTGACA...GGTGGGATGGGGATTAGAATACCACAGACACTCTGCAGTGCCTGCAGGCAGTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR TCA 90 bp | GTGGTTGTCCTGGGGCCGACTGCCTGCAGGCACTGCAGAGTGTCTGTGGTATTCGCGCTGTCCTCTTCATaGTGGACTCTACTTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VVVLGPTACRHCRVSVVFALSSS*WTLLSH Trigger: ATGGGAAAGTAGAGTCCATCATGAAGAGGACAGCGC...GAATACCACAGACACTCTGCAGTGCCTGCAGGCAGTCGGCCCCAGGACAACCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR CCA 90 bp | GCAGGCACTGCAGAGTGTCTGTGGTATTCTAATCCCCATCCCACCACTCTGAGATCACCAGCTCGTACATaGCAGCGCCCGCCATGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: AGTAECLWYSNPHPTTLRSPART*QRPPCH Trigger: GTGACATGGCGGGCGCTGCCATGTACGAGCTGGTGA...TCTCAGAGTGGTGGGATGGGGATTAGAATACCACAGACACTCTGCAGTGCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR CCA 90 bp | CGACTGCCTGCAGGCACTGCAGAGTGTCTGTGGTATTCTAATCCCCATCCCACCCGCACAGGCCACACTTaGACCATGCTGAACTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RLPAGTAECLWYSNPHPTRTGHT*TMLNFS Trigger: GGAGAAGTTCAGCATGGTCCAAGTGTGGCCTGTGCG...GGTGGGATGGGGATTAGAATACCACAGACACTCTGCAGTGCCTGCAGGCAGTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR TCA 90 bp | CGACTGCCTGCAGGCACTGCAGAGTGTCTGTGGTATTCTAATCCCCATCCCACCGTGCATAGTCGGCCTTaGTCTTTGCCTCGCCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: RLPAGTAECLWYSNPHPTVHSRP*SLPRHL Trigger: AAGATGGCGAGGCAAAGATCAAGGCCGACTATGCAC...GGTGGGATGGGGATTAGAATACCACAGACACTCTGCAGTGCCTGCAGGCAGTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR GCA 90 bp | CGACTGCCTGCAGGCACTGCAGAGTGTCTGTGGTATTCTAATCCCCATCCCACCAGAGAGGTTTACCAGTaGGGAGTACGGGGTCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RLPAGTAECLWYSNPHPTREVYQ*GVRGLQ Trigger: TTGGAGACCCCGTACTCCGCACTGGTAAACCTCTCT...GGTGGGATGGGGATTAGAATACCACAGACACTCTGCAGTGCCTGCAGGCAGTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR GCA 90 bp | GTGGTTGTCCTGGGGCCGACTGCCTGCAGGCACTGCAGAGTGTCTGTGGTATTCCGAGACATTTCACTCTaGCTGCTCGCTCATAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VVVLGPTACRHCRVSVVFRDISL*LLAHRK Trigger: CTTTCTATGAGCGAGCAGGCAGAGTGAAATGTCTCG...GAATACCACAGACACTCTGCAGTGCCTGCAGGCAGTCGGCCCCAGGACAACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR CCA 90 bp | GTGGTTGTCCTGGGGCCGACTGCCTGCAGGCACTGCAGAGTGTCTGTGGTATTCGCTTCCTCTGTTACGTaGGGGCAACATGATTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VVVLGPTACRHCRVSVVFASSVT*GQHDFV Trigger: CACAAAATCATGTTGCCCCCACGTAACAGAGGAAGC...GAATACCACAGACACTCTGCAGTGCCTGCAGGCAGTCGGCCCCAGGACAACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR CCA 90 bp | GTGGTTGTCCTGGGGCCGACTGCCTGCAGGCACTGCAGAGTGTCTGTGGTATTCATCTTATTGTCACTCTaGGCAGTGGTCTCCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VVVLGPTACRHCRVSVVFILLSL*AVVSTA Trigger: AGCTGTGGAGACCACTGCCCAGAGTGACAATAAGAT...GAATACCACAGACACTCTGCAGTGCCTGCAGGCAGTCGGCCCCAGGACAACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR CCA 90 bp | AAGTACCCATCCATCCACGGTATGGAGTTCTGGCCTTCCATTCCCAACAGAGTATCACCAGCTCGTACATaGCAGCGCCCGCCATGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KYPSIHGMEFWPSIPNRVSPART*QRPPCH Trigger: GTGACATGGCGGGCGCTGCCATGTACGAGCTGGTGA...TACTCTGTTGGGAATGGAAGGCCAGAACTCCATACCGTGGATGGATGGGTACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR CCA 90 bp | GCAGGCACTGCAGAGTGTCTGTGGTATTCTAATCCCCATCCCACCACTCTGAGAACAGCCAAAGGCGCCTaGGATAGCAGTAGTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AGTAECLWYSNPHPTTLRTAKGA*DSSSSS Trigger: GGAGGAACTACTGCTATCCCAGGCGCCTTTGGCTGT...TCTCAGAGTGGTGGGATGGGGATTAGAATACCACAGACACTCTGCAGTGCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR TCA 90 bp | AGGTTGCTGGTAGGTATAAGCAGACAGGTTTTGAAATCTTTCTCATCTCCGCTACGGGCAGCTTCTCAGTaGCAGGCCGCACCTGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: RLLVGISRQVLKSFSSPLRAASQ*QAAPAA Trigger: TGCGGCAGGTGCGGCCTGTCACTGAGAAGCTGCCCG...TAGCGGAGATGAGAAAGATTTCAAAACCTGTCTGCTTATACCTACCAGCAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR TCA 90 bp | CGACTGCCTGCAGGCACTGCAGAGTGTCTGTGGTATTCTAATCCCCATCCCACCAAATGTCTCCACCAGTaGTATGACTACCAACCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: RLPAGTAECLWYSNPHPTKCLHQ*YDYQPV Trigger: TACGGGTTGGTAGTCATATCACTGGTGGAGACATTT...GGTGGGATGGGGATTAGAATACCACAGACACTCTGCAGTGCCTGCAGGCAGTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR TCA 90 bp | GGAAGGGGTAGTCACCTTACATACAAGTTTACAGTATGGATCATGTTACAATGTCGGGCAGCTTCTCAGTaGCAGGCCGCACCTGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: GRGSHLTYKFTVWIMLQCRAASQ*QAAPAA Trigger: TGCGGCAGGTGCGGCCTGTCACTGAGAAGCTGCCCG...ACATTGTAACATGATCCATACTGTAAACTTGTATGTAAGGTGACTACCCCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR GCA 90 bp | AGGTTGCTGGTAGGTATAAGCAGACAGGTTTTGAAATCTTTCTCATCTCCGCTACCAACCAGCTCGCTGTaGCCCACTCTCACCAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RLLVGISRQVLKSFSSPLPTSSL*PTLTSS Trigger: CGAGCTGGTGAGAGTGGGGCACAGCGAGCTGGTTGG...TAGCGGAGATGAGAAAGATTTCAAAACCTGTCTGCTTATACCTACCAGCAACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| 3UTR CAA 72 bp | TCTCCGCTAGTCAGGGCTCCTGGATACGAAGCCACATaGGAAGCAAACCGATTAAGCAGCACCACTAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: SPLVRAPGYEAT*EANRLSSTTNP Trigger: TGGATTAGTGGTGCTGCTTAATCGGTTTGCTTCCAATGTGGCTTCGTATCCAGGAGCCCTGACTAGCGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR CCA 90 bp | CGACTGCCTGCAGGCACTGCAGAGTGTCTGTGGTATTCTAATCCCCATCCCACCTACTTGGATAGAGACTaGGAAATCACAGTCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RLPAGTAECLWYSNPHPTYLDRD*EITVFP Trigger: TGGAAAGACTGTGATTTCCCAGTCTCTATCCAAGTA...GGTGGGATGGGGATTAGAATACCACAGACACTCTGCAGTGCCTGCAGGCAGTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR CCA 90 bp | GCAGGCACTGCAGAGTGTCTGTGGTATTCTAATCCCCATCCCACCACTCTGAGAAGAATGAAATCATGTTaGACAGCATCCCCACTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AGTAECLWYSNPHPTTLRRMKSC*TASPLS Trigger: AGACAGTGGGGATGCTGTCCAACATGATTTCATTCT...TCTCAGAGTGGTGGGATGGGGATTAGAATACCACAGACACTCTGCAGTGCCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR CCA 90 bp | CCATATCTGTCAACAGTGTTCAATAATTGGAAGAATATCCTTCTTCAGCAGCAGTGTCACTCTGGGCAGTaGTCTCCACAGCTCGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PYLSTVFNNWKNILLQQQCHSGQ*SPQLGG Trigger: CCCGCCGAGCTGTGGAGACCACTGCCCAGAGTGACA...CTGCTGCTGAAGAAGGATATTCTTCCAATTATTGAACACTGTTGACAGATATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR TCA 90 bp | AGGTTGCTGGTAGGTATAAGCAGACAGGTTTTGAAATCTTTCTCATCTCCGCTAAGTCGGCCATCATACTaGCGTGGTAGCCCATGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RLLVGISRQVLKSFSSPLSRPSY*RGSPCH Trigger: GTGACATGGGCTACCACGTCAGTATGATGGCCGACT...TAGCGGAGATGAGAAAGATTTCAAAACCTGTCTGCTTATACCTACCAGCAACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR TCA 90 bp | AAGTACCCATCCATCCACGGTATGGAGTTCTGGCCTTCCATTCCCAACAGAGTATTGCTACCTCCAGAGTaGTTTTATCCGTCTCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: KYPSIHGMEFWPSIPNRVLLPPE*FYPSLL Trigger: TAGCAGAGACGGATAAAATCACTCTGGAGGTAGCAA...TACTCTGTTGGGAATGGAAGGCCAGAACTCCATACCGTGGATGGATGGGTACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR GCA 90 bp | CAGAAAGTATTTTCTGCAATTGGTAAACTTGCTGTTTTCAGAATGTCAACAGGCCCAACCAGCTCGCTGTaGCCCACTCTCACCAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: QKVFSAIGKLAVFRMSTGPTSSL*PTLTSS Trigger: CGAGCTGGTGAGAGTGGGGCACAGCGAGCTGGTTGG...GCCTGTTGACATTCTGAAAACAGCAAGTTTACCAATTGCAGAAAATACTTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR GCA 90 bp | GCAGGCACTGCAGAGTGTCTGTGGTATTCTAATCCCCATCCCACCACTCTGAGAGGAGTGTACCCATTTTaGTGTAGGAAGTCATCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: AGTAECLWYSNPHPTTLRGVYPF*CRKSSL Trigger: TAAAGATGACTTCCTACAGCAAAATGGGTACACTCC...TCTCAGAGTGGTGGGATGGGGATTAGAATACCACAGACACTCTGCAGTGCCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR GCA 90 bp | GCAGGCACTGCAGAGTGTCTGTGGTATTCTAATCCCCATCCCACCACTCTGAGACTACGGAATGCATTCTaGATATCTTCAAGAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AGTAECLWYSNPHPTTLRLRNAF*ISSRSC Trigger: ACAGCTTCTTGAAGATATGCAGAATGCATTCCGTAG...TCTCAGAGTGGTGGGATGGGGATTAGAATACCACAGACACTCTGCAGTGCCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR CCA 90 bp | AGGTTGCTGGTAGGTATAAGCAGACAGGTTTTGAAATCTTTCTCATCTCCGCTAACAGCCAAAGGCGCCTaGGATAGCAGTAGTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RLLVGISRQVLKSFSSPLTAKGA*DSSSSS Trigger: GGAGGAACTACTGCTATCCCAGGCGCCTTTGGCTGT...TAGCGGAGATGAGAAAGATTTCAAAACCTGTCTGCTTATACCTACCAGCAACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR TCA 90 bp | AGGTTGCTGGTAGGTATAAGCAGACAGGTTTTGAAATCTTTCTCATCTCCGCTATGTAACCACAGGCCCTaGGACTCCATGCACATAACC | + |
|
Preference number: 4 (lower is better) Translates to: RLLVGISRQVLKSFSSPLCNHRP*DSMHIT Trigger: GGTTATGTGCATGGAGTCTCAGGGCCTGTGGTTACA...TAGCGGAGATGAGAAAGATTTCAAAACCTGTCTGCTTATACCTACCAGCAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR TCA 90 bp | GGAGATGAGAAATTCAGGAAAATATACACGTATGAGCTTGCCGTGGAAGAGGGAGCGCTGTCCTCTTCATaGTGGACTCTACTTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GDEKFRKIYTYELAVEEGALSSS*WTLLSH Trigger: ATGGGAAAGTAGAGTCCATCATGAAGAGGACAGCGC...TCCCTCTTCCACGGCAAGCTCATACGTGTATATTTTCCTGAATTTCTCATCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR GCA 90 bp | GGAGATGAGAAATTCAGGAAAATATACACGTATGAGCTTGCCGTGGAAGAGGGAGAGCTGCACGATTTCTaGCAGATCCTCTTCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GDEKFRKIYTYELAVEEGELHDF*QILFFL Trigger: CAGGAAGAAGAGGATCTGGCAGAAATCGTGCAGCTC...TCCCTCTTCCACGGCAAGCTCATACGTGTATATTTTCCTGAATTTCTCATCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR CCA 90 bp | AAGTACCCATCCATCCACGGTATGGAGTTCTGGCCTTCCATTCCCAACAGAGTAAAAATCACCACCAGGTaGAGAAACTGCTCCTACAAT | + |
|
Preference number: 4 (lower is better) Translates to: KYPSIHGMEFWPSIPNRVKITTR*RNCSYN Trigger: ATTGTAGGAGCAGTTTCTCCACCTGGTGGTGATTTT...TACTCTGTTGGGAATGGAAGGCCAGAACTCCATACCGTGGATGGATGGGTACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR CCA 90 bp | AAGTACCCATCCATCCACGGTATGGAGTTCTGGCCTTCCATTCCCAACAGAGTACACTGTCTTGTAGAATaGACAGAACCTGTCATAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KYPSIHGMEFWPSIPNRVHCLVE*TEPVIR Trigger: CCTTATGACAGGTTCTGTCCATTCTACAAGACAGTG...TACTCTGTTGGGAATGGAAGGCCAGAACTCCATACCGTGGATGGATGGGTACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| 3UTR CAA 72 bp | AAGCCTAGGTTGCTGGTAGGTATAAGCAGACAGGTTTaGAAATCTTTCTCATCTCCGCTAGTCAGGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KPRLLVGISRQV*KSFSSPLVRAP Trigger: AGGAGCCCTGACTAGCGGAGATGAGAAAGATTTCAAAACCTGTCTGCTTATACCTACCAGCAACCTAGGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR TCA 90 bp | AGTTTACTGGAGATGAGGGAAGGGGTAGTCACCTTACATACAAGTTTACAGTATCTGCTCCTACAATGCTaGCACTCCCTTCTCTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLLEMREGVVTLHTSLQYLLLQC*HSLLSQ Trigger: CTGAGAGAGAAGGGAGTGTCAGCATTGTAGGAGCAG...ATACTGTAAACTTGTATGTAAGGTGACTACCCCTTCCCTCATCTCCAGTAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR TCA 90 bp | GCTTGTCTGACTAAGTCTGAGGAAAAGAATGGCTATGATGTGGATCACATTTTCCTGCTCCTACAATGCTaGCACTCCCTTCTCTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ACLTKSEEKNGYDVDHIFLLLQC*HSLLSQ Trigger: CTGAGAGAGAAGGGAGTGTCAGCATTGTAGGAGCAG...GAAAATGTGATCCACATCATAGCCATTCTTTTCCTCAGACTTAGTCAGACAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR GCA 90 bp | GCTTGTCTGACTAAGTCTGAGGAAAAGAATGGCTATGATGTGGATCACATTTTCAGAGAGGTTTACCAGTaGGGAGTACGGGGTCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: ACLTKSEEKNGYDVDHIFREVYQ*GVRGLQ Trigger: TTGGAGACCCCGTACTCCGCACTGGTAAACCTCTCT...GAAAATGTGATCCACATCATAGCCATTCTTTTCCTCAGACTTAGTCAGACAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR GCA 90 bp | ACAGTCTTAGAGCAAGGAAGAAAACACATCTCGAATCCAGGACAACAAAAACAAGCCTTTCCCACGAGCTaGACGATTTCTGCCAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: TVLEQGRKHISNPGQQKQAFPTS*TISARS Trigger: GGATCTGGCAGAAATCGTGCAGCTCGTGGGAAAGGC...TTGTTTTTGTTGTCCTGGATTCGAGATGTGTTTTCTTCCTTGCTCTAAGACTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR CCA 90 bp | ACAGTCTTAGAGCAAGGAAGAAAACACATCTCGAATCCAGGACAACAAAAACAACGCACAGGCCACACTTaGACCATGCTGAACTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TVLEQGRKHISNPGQQKQRTGHT*TMLNFS Trigger: GGAGAAGTTCAGCATGGTCCAAGTGTGGCCTGTGCG...TTGTTTTTGTTGTCCTGGATTCGAGATGTGTTTTCTTCCTTGCTCTAAGACTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR TCA 90 bp | ACAGTCTTAGAGCAAGGAAGAAAACACATCTCGAATCCAGGACAACAAAAACAATGTAACCACAGGCCCTaGGACTCCATGCACATAACC | + |
|
Preference number: 4 (lower is better) Translates to: TVLEQGRKHISNPGQQKQCNHRP*DSMHIT Trigger: GGTTATGTGCATGGAGTCTCAGGGCCTGTGGTTACA...TTGTTTTTGTTGTCCTGGATTCGAGATGTGTTTTCTTCCTTGCTCTAAGACTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR TCA 90 bp | GCCAAGCTCTCTGAAGCGAGCCTTATTAAGCAAGTATGGGAATTATTATTTAAAAGTCGGCCATCATACTaGCGTGGTAGCCCATGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: AKLSEASLIKQVWELLFKSRPSY*RGSPCH Trigger: GTGACATGGGCTACCACGTCAGTATGATGGCCGACT...TTTAAATAATAATTCCCATACTTGCTTAATAAGGCTCGCTTCAGAGAGCTTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR TCA 90 bp | ACAGTCTTAGAGCAAGGAAGAAAACACATCTCGAATCCAGGACAACAAAAACAAGTGCATAGTCGGCCTTaGTCTTTGCCTCGCCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: TVLEQGRKHISNPGQQKQVHSRP*SLPRHL Trigger: AAGATGGCGAGGCAAAGATCAAGGCCGACTATGCAC...TTGTTTTTGTTGTCCTGGATTCGAGATGTGTTTTCTTCCTTGCTCTAAGACTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR GCA 90 bp | ATTGGTAAACTTGCTGTTTTCAGAATGTCAACAGGCAAACAAACACGTGACACGGAGCTGCACGATTTCTaGCAGATCCTCTTCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: IGKLAVFRMSTGKQTRDTELHDF*QILFFL Trigger: CAGGAAGAAGAGGATCTGGCAGAAATCGTGCAGCTC...CGTGTCACGTGTTTGTTTGCCTGTTGACATTCTGAAAACAGCAAGTTTACCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR GCA 90 bp | GCCAAGCTCTCTGAAGCGAGCCTTATTAAGCAAGTATGGGAATTATTATTTAAAGCCTTTCCCACGAGCTaGACGATTTCTGCCAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: AKLSEASLIKQVWELLFKAFPTS*TISARS Trigger: GGATCTGGCAGAAATCGTGCAGCTCGTGGGAAAGGC...TTTAAATAATAATTCCCATACTTGCTTAATAAGGCTCGCTTCAGAGAGCTTGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR CCA 90 bp | AGGTTGCTGGTAGGTATAAGCAGACAGGTTTTGAAATCTTTCTCATCTCCGCTACATACACCTGAATGGTaGCCATGTCACCTTCCAATC | + |
|
Preference number: 4 (lower is better) Translates to: RLLVGISRQVLKSFSSPLHTPEW*PCHLPI Trigger: GATTGGAAGGTGACATGGCCACCATTCAGGTGTATG...TAGCGGAGATGAGAAAGATTTCAAAACCTGTCTGCTTATACCTACCAGCAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR TCA 90 bp | GGAAGGGGTAGTCACCTTACATACAAGTTTACAGTATGGATCATGTTACAATGTTTTGGGTCTGACTGCTaGTATCCGACAGAGGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GRGSHLTYKFTVWIMLQCFGSDC*YPTEVS Trigger: AGAGACCTCTGTCGGATATCAGCAGTCAGACCCAAA...ACATTGTAACATGATCCATACTGTAAACTTGTATGTAAGGTGACTACCCCTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR TCA 90 bp | ATTGGTAAACTTGCTGTTTTCAGAATGTCAACAGGCAAACAAACACGTGACACGACACTTGGACCATGCTaGACTTCTCCTTCACACCTT | + |
|
Preference number: 4 (lower is better) Translates to: IGKLAVFRMSTGKQTRDTTLGPC*TSPSHL Trigger: AAGGTGTGAAGGAGAAGTTCAGCATGGTCCAAGTGT...CGTGTCACGTGTTTGTTTGCCTGTTGACATTCTGAAAACAGCAAGTTTACCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR TCA 90 bp | AGTTTACTGGAGATGAGGGAAGGGGTAGTCACCTTACATACAAGTTTACAGTATCCAGCGTTGCAGAAGTaGCTGGATCAGAAAAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: SLLEMREGVVTLHTSLQYPALQK*LDQKNH Trigger: GTGATTTTTCTGATCCAGTCACTTCTGCAACGCTGG...ATACTGTAAACTTGTATGTAAGGTGACTACCCCTTCCCTCATCTCCAGTAAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR TCA 90 bp | AGGTTGCTGGTAGGTATAAGCAGACAGGTTTTGAAATCTTTCTCATCTCCGCTATTGCTACCTCCAGAGTaGTTTTATCCGTCTCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: RLLVGISRQVLKSFSSPLLLPPE*FYPSLL Trigger: TAGCAGAGACGGATAAAATCACTCTGGAGGTAGCAA...TAGCGGAGATGAGAAAGATTTCAAAACCTGTCTGCTTATACCTACCAGCAACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR CCA 90 bp | GGAGATGAGAAATTCAGGAAAATATACACGTATGAGCTTGCCGTGGAAGAGGGAAAAATCACCACCAGGTaGAGAAACTGCTCCTACAAT | + |
|
Preference number: 4 (lower is better) Translates to: GDEKFRKIYTYELAVEEGKITTR*RNCSYN Trigger: ATTGTAGGAGCAGTTTCTCCACCTGGTGGTGATTTT...TCCCTCTTCCACGGCAAGCTCATACGTGTATATTTTCCTGAATTTCTCATCTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR TCA 90 bp | GGAAGGGGTAGTCACCTTACATACAAGTTTACAGTATGGATCATGTTACAATGTGTTTCTTCATACACCTaGATGGTGGCCATGTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: GRGSHLTYKFTVWIMLQCVSSYT*MVAMSP Trigger: AGGTGACATGGCCACCATTCAGGTGTATGAAGAAAC...ACATTGTAACATGATCCATACTGTAAACTTGTATGTAAGGTGACTACCCCTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR TCA 90 bp | ACAGTCTTAGAGCAAGGAAGAAAACACATCTCGAATCCAGGACAACAAAAACAAACACTTGGACCATGCTaGACTTCTCCTTCACACCTT | + |
|
Preference number: 4 (lower is better) Translates to: TVLEQGRKHISNPGQQKQTLGPC*TSPSHL Trigger: AAGGTGTGAAGGAGAAGTTCAGCATGGTCCAAGTGT...TTGTTTTTGTTGTCCTGGATTCGAGATGTGTTTTCTTCCTTGCTCTAAGACTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR TCA 90 bp | ATTGGTAAACTTGCTGTTTTCAGAATGTCAACAGGCAAACAAACACGTGACACGGAGGAACAAACTCCGTaGAGTGCTTGTCATAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: IGKLAVFRMSTGKQTRDTEEQTP*SACHST Trigger: AGTACTATGACAAGCACTTCACGGAGTTTGTTCCTC...CGTGTCACGTGTTTGTTTGCCTGTTGACATTCTGAAAACAGCAAGTTTACCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR GCA 90 bp | CCATATCTGTCAACAGTGTTCAATAATTGGAAGAATATCCTTCTTCAGCAGCAGCAGAGGGGAAGTGCTTaGGCTGAGCTAACTTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: PYLSTVFNNWKNILLQQQQRGSA*AELTSY Trigger: ATAAGAAGTTAGCTCAGCGCAAGCACTTCCCCTCTG...CTGCTGCTGAAGAAGGATATTCTTCCAATTATTGAACACTGTTGACAGATATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR GCA 90 bp | ATTGGTAAACTTGCTGTTTTCAGAATGTCAACAGGCAAACAAACACGTGACACGAGATCCTCTTCTTCCTaGAGGATCTCCTTAGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: IGKLAVFRMSTGKQTRDTRSSSS*RISLAL Trigger: CAAAGCTAAGGAGATCCTGCAGGAAGAAGAGGATCT...CGTGTCACGTGTTTGTTTGCCTGTTGACATTCTGAAAACAGCAAGTTTACCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR CCA 90 bp | ACAGTCTTAGAGCAAGGAAGAAAACACATCTCGAATCCAGGACAACAAAAACAACATACACCTGAATGGTaGCCATGTCACCTTCCAATC | + |
|
Preference number: 4 (lower is better) Translates to: TVLEQGRKHISNPGQQKQHTPEW*PCHLPI Trigger: GATTGGAAGGTGACATGGCCACCATTCAGGTGTATG...TTGTTTTTGTTGTCCTGGATTCGAGATGTGTTTTCTTCCTTGCTCTAAGACTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR CCA 90 bp | GCTTGTCTGACTAAGTCTGAGGAAAAGAATGGCTATGATGTGGATCACATTTTCCGTTGCAGAAGTGACTaGATCAGAAAAATCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: ACLTKSEEKNGYDVDHIFRCRSD*IRKITT Trigger: GGTGGTGATTTTTCTGATCCAGTCACTTCTGCAACG...GAAAATGTGATCCACATCATAGCCATTCTTTTCCTCAGACTTAGTCAGACAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR CCA 90 bp | ACAGTCTTAGAGCAAGGAAGAAAACACATCTCGAATCCAGGACAACAAAAACAAATCTTATTGTCACTCTaGGCAGTGGTCTCCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TVLEQGRKHISNPGQQKQILLSL*AVVSTA Trigger: AGCTGTGGAGACCACTGCCCAGAGTGACAATAAGAT...TTGTTTTTGTTGTCCTGGATTCGAGATGTGTTTTCTTCCTTGCTCTAAGACTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR TCA 90 bp | CAGAAAGTATTTTCTGCAATTGGTAAACTTGCTGTTTTCAGAATGTCAACAGGCGTTTCTTCATACACCTaGATGGTGGCCATGTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: QKVFSAIGKLAVFRMSTGVSSYT*MVAMSP Trigger: AGGTGACATGGCCACCATTCAGGTGTATGAAGAAAC...GCCTGTTGACATTCTGAAAACAGCAAGTTTACCAATTGCAGAAAATACTTTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR TCA 90 bp | GGAAGGGGTAGTCACCTTACATACAAGTTTACAGTATGGATCATGTTACAATGTAAATGTCTCCACCAGTaGTATGACTACCAACCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: GRGSHLTYKFTVWIMLQCKCLHQ*YDYQPV Trigger: TACGGGTTGGTAGTCATATCACTGGTGGAGACATTT...ACATTGTAACATGATCCATACTGTAAACTTGTATGTAAGGTGACTACCCCTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR TCA 90 bp | CAGAAAGTATTTTCTGCAATTGGTAAACTTGCTGTTTTCAGAATGTCAACAGGCCCAGCGTTGCAGAAGTaGCTGGATCAGAAAAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: QKVFSAIGKLAVFRMSTGPALQK*LDQKNH Trigger: GTGATTTTTCTGATCCAGTCACTTCTGCAACGCTGG...GCCTGTTGACATTCTGAAAACAGCAAGTTTACCAATTGCAGAAAATACTTTCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR TCA 90 bp | CCATATCTGTCAACAGTGTTCAATAATTGGAAGAATATCCTTCTTCAGCAGCAGGAGGAACAAACTCCGTaGAGTGCTTGTCATAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: PYLSTVFNNWKNILLQQQEEQTP*SACHST Trigger: AGTACTATGACAAGCACTTCACGGAGTTTGTTCCTC...CTGCTGCTGAAGAAGGATATTCTTCCAATTATTGAACACTGTTGACAGATATGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR TCA 90 bp | GCTTGTCTGACTAAGTCTGAGGAAAAGAATGGCTATGATGTGGATCACATTTTCGGCCATGTCATAGAATaGAATCATGTTGGACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ACLTKSEEKNGYDVDHIFGHVIE*NHVGQH Trigger: ATGCTGTCCAACATGATTTCATTCTATGACATGGCC...GAAAATGTGATCCACATCATAGCCATTCTTTTCCTCAGACTTAGTCAGACAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR GCA 90 bp | CCATATCTGTCAACAGTGTTCAATAATTGGAAGAATATCCTTCTTCAGCAGCAGAACAATACCCAGCGTTaGAGAAGTGACTGGATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PYLSTVFNNWKNILLQQQNNTQR*RSDWIR Trigger: TCTGATCCAGTCACTTCTGCAACGCTGGGTATTGTT...CTGCTGCTGAAGAAGGATATTCTTCCAATTATTGAACACTGTTGACAGATATGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR GCA 90 bp | GGAAGGGGTAGTCACCTTACATACAAGTTTACAGTATGGATCATGTTACAATGTAACAATACCCAGCGTTaGAGAAGTGACTGGATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GRGSHLTYKFTVWIMLQCNNTQR*RSDWIR Trigger: TCTGATCCAGTCACTTCTGCAACGCTGGGTATTGTT...ACATTGTAACATGATCCATACTGTAAACTTGTATGTAAGGTGACTACCCCTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR GCA 90 bp | CAGAAAGTATTTTCTGCAATTGGTAAACTTGCTGTTTTCAGAATGTCAACAGGCCAGAGGGGAAGTGCTTaGGCTGAGCTAACTTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: QKVFSAIGKLAVFRMSTGQRGSA*AELTSY Trigger: ATAAGAAGTTAGCTCAGCGCAAGCACTTCCCCTCTG...GCCTGTTGACATTCTGAAAACAGCAAGTTTACCAATTGCAGAAAATACTTTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR GCA 90 bp | GGAAGGGGTAGTCACCTTACATACAAGTTTACAGTATGGATCATGTTACAATGTAGATCCTCTTCTTCCTaGAGGATCTCCTTAGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GRGSHLTYKFTVWIMLQCRSSSS*RISLAL Trigger: CAAAGCTAAGGAGATCCTGCAGGAAGAAGAGGATCT...ACATTGTAACATGATCCATACTGTAAACTTGTATGTAAGGTGACTACCCCTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR CCA 90 bp | GCCAAGCTCTCTGAAGCGAGCCTTATTAAGCAAGTATGGGAATTATTATTTAAACTTCATACACCTGAATaGTGGCCATGTCACCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AKLSEASLIKQVWELLFKLHTPE*WPCHLP Trigger: TGGAAGGTGACATGGCCACCATTCAGGTGTATGAAG...TTTAAATAATAATTCCCATACTTGCTTAATAAGGCTCGCTTCAGAGAGCTTGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR CCA 90 bp | GCCAAGCTCTCTGAAGCGAGCCTTATTAAGCAAGTATGGGAATTATTATTTAAAGCTTCCTCTGTTACGTaGGGGCAACATGATTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AKLSEASLIKQVWELLFKASSVT*GQHDFV Trigger: CACAAAATCATGTTGCCCCCACGTAACAGAGGAAGC...TTTAAATAATAATTCCCATACTTGCTTAATAAGGCTCGCTTCAGAGAGCTTGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR CCA 90 bp | ATTGGTAAACTTGCTGTTTTCAGAATGTCAACAGGCAAACAAACACGTGACACGAGAATGAAATCATGTTaGACAGCATCCCCACTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IGKLAVFRMSTGKQTRDTRMKSC*TASPLS Trigger: AGACAGTGGGGATGCTGTCCAACATGATTTCATTCT...CGTGTCACGTGTTTGTTTGCCTGTTGACATTCTGAAAACAGCAAGTTTACCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR GCA 90 bp | CCATATCTGTCAACAGTGTTCAATAATTGGAAGAATATCCTTCTTCAGCAGCAGATCTTCAAGAAGCTGTaGATAGTCGGCCTTGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: PYLSTVFNNWKNILLQQQIFKKL*IVGLDL Trigger: AAGATCAAGGCCGACTATGCACAGCTTCTTGAAGAT...CTGCTGCTGAAGAAGGATATTCTTCCAATTATTGAACACTGTTGACAGATATGG 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR CCA 90 bp | ACAGTCTTAGAGCAAGGAAGAAAACACATCTCGAATCCAGGACAACAAAAACAACACTGTCTTGTAGAATaGACAGAACCTGTCATAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TVLEQGRKHISNPGQQKQHCLVE*TEPVIR Trigger: CCTTATGACAGGTTCTGTCCATTCTACAAGACAGTG...TTGTTTTTGTTGTCCTGGATTCGAGATGTGTTTTCTTCCTTGCTCTAAGACTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| 3UTR CAA 72 bp | TTAAGCAGCACCACTAATCCACCTCCCAACAAGCCATaGCATAATCCATATCTGTCAACAGTGTTCAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: LSSTTNPPPNKP*HNPYLSTVFNN Trigger: ATTATTGAACACTGTTGACAGATATGGATTATGCAATGGCTTGTTGGGAGGTGGATTAGTGGTGCTGCTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| 3UTR CAA 72 bp | TTTCTTGGGATCATTCATTCTGATCACAAGCCTAGGTaGCTGGTAGGTATAAGCAGACAGGTTTTGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: FLGIIHSDHKPR*LVGISRQVLKS Trigger: AGATTTCAAAACCTGTCTGCTTATACCTACCAGCAACCTAGGCTTGTGATCAGAATGAATGATCCCAAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR TCA 90 bp | GCCAAGCTCTCTGAAGCGAGCCTTATTAAGCAAGTATGGGAATTATTATTTAAAGGCCATGTCATAGAATaGAATCATGTTGGACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AKLSEASLIKQVWELLFKGHVIE*NHVGQH Trigger: ATGCTGTCCAACATGATTTCATTCTATGACATGGCC...TTTAAATAATAATTCCCATACTTGCTTAATAAGGCTCGCTTCAGAGAGCTTGGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR GCA 90 bp | GGAAGGGGTAGTCACCTTACATACAAGTTTACAGTATGGATCATGTTACAATGTGGAGTGTACCCATTTTaGTGTAGGAAGTCATCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: GRGSHLTYKFTVWIMLQCGVYPF*CRKSSL Trigger: TAAAGATGACTTCCTACAGCAAAATGGGTACACTCC...ACATTGTAACATGATCCATACTGTAAACTTGTATGTAAGGTGACTACCCCTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR GCA 90 bp | ACAGTCTTAGAGCAAGGAAGAAAACACATCTCGAATCCAGGACAACAAAAACAACTACGGAATGCATTCTaGATATCTTCAAGAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TVLEQGRKHISNPGQQKQLRNAF*ISSRSC Trigger: ACAGCTTCTTGAAGATATGCAGAATGCATTCCGTAG...TTGTTTTTGTTGTCCTGGATTCGAGATGTGTTTTCTTCCTTGCTCTAAGACTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR CCA 90 bp | CAGAAAGTATTTTCTGCAATTGGTAAACTTGCTGTTTTCAGAATGTCAACAGGCTACTTGGATAGAGACTaGGAAATCACAGTCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QKVFSAIGKLAVFRMSTGYLDRD*EITVFP Trigger: TGGAAAGACTGTGATTTCCCAGTCTCTATCCAAGTA...GCCTGTTGACATTCTGAAAACAGCAAGTTTACCAATTGCAGAAAATACTTTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS TCA 90 bp | CACGGGAAAAGGGCATCGAGGACTCTCTGGCCAGTAAGCAAGGGGTaGTTGGCGGGCAGCTTCTCAGTGACAGGCCGCACCTGCCGCACA | + |
|
Preference number: 5 (lower is better) Translates to: HGKRASRTLWPVSKG*LAGSFSVTGRTCRT Trigger: TGTGCGGCAGGTGCGGCCTGTCACTGAGAAGCTGCCCGCCAATCACCCCTTGCTTACTGGCCAGAGAGTCCTCGATGCCCTTTTCCCGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS GCA 90 bp | GCCATGTCACCTTCCAATCGAATAATTTCTCCAACCAGCTCGCTGTaGCCCACTCTCACCAGCTCGTACATGGCAGCGCCCGCCATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: AMSPSNRIISPTSSL*PTLTSSYMAAPAMS Trigger: TGACATGGCGGGCGCTGCCATGTACGAGCTGGTGAGAGTGGGGCACAGCGAGCTGGTTGGAGAAATTATTCGATTGGAAGGTGACATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 ENSMUST00000124102.8 ENSMUST00000137557.8 ENSMUST00000147025.2 |
||
| CDS-3UTR CAA 90 bp | GTGGTTGTCCTGGGGCCGACTGCCTGCAGGCACTGCAGAGTGTCTGTGGTATTCCCAACCCGTAGGTTTTaGCTGGGTATAAACTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VVVLGPTACRHCRVSVVFPTRRF*LGINSH Trigger: ATGGGAGTTTATACCCAGCAAAAACCTACGGGTTGG...GAATACCACAGACACTCTGCAGTGCCTGCAGGCAGTCGGCCCCAGGACAACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR CAA 90 bp | CGACTGCCTGCAGGCACTGCAGAGTGTCTGTGGTATTCTAATCCCCATCCCACCTCCTCATCTCGGATTTaGGGTAGCTTGGAGAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: RLPAGTAECLWYSNPHPTSSSRI*GSLEKS Trigger: GGATTTCTCCAAGCTACCCAAAATCCGAGATGAGGA...GGTGGGATGGGGATTAGAATACCACAGACACTCTGCAGTGCCTGCAGGCAGTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS TCA 90 bp | ACTCTGGGCAGTGGTCTCCACAGCTCGGCGGGCCATGTCATAGAATaGAATCATGTTGGACAGCATCCCCACTGTCTTGTAGAATGGACA | + |
|
Preference number: 5 (lower is better) Translates to: TLGSGLHSSAGHVIE*NHVGQHPHCLVEWT Trigger: TGTCCATTCTACAAGACAGTGGGGATGCTGTCCAACATGATTTCATTCTATGACATGGCCCGCCGAGCTGTGGAGACCACTGCCCAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR CAA 90 bp | GCAGGCACTGCAGAGTGTCTGTGGTATTCTAATCCCCATCCCACCACTCTGAGATCCTCATCTCGGATTTaGGGTAGCTTGGAGAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: AGTAECLWYSNPHPTTLRSSSRI*GSLEKS Trigger: GGATTTCTCCAAGCTACCCAAAATCCGAGATGAGGA...TCTCAGAGTGGTGGGATGGGGATTAGAATACCACAGACACTCTGCAGTGCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
||
| CDS-3UTR CAA 90 bp | GTGGTTGTCCTGGGGCCGACTGCCTGCAGGCACTGCAGAGTGTCTGTGGTATTCAACATGATTTTGTGTTaGATGAGGGAGTTCTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: VVVLGPTACRHCRVSVVFNMILC*MREFSL Trigger: CAATGAGAACTCCCTCATCAAACACAAAATCATGTT...GAATACCACAGACACTCTGCAGTGCCTGCAGGCAGTCGGCCCCAGGACAACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| CDS CCA 90 bp | TGGTCTCCACAGCTCGGCGGGCCATGTCATAGAATGAAATCATGTTaGACAGCATCCCCACTGTCTTGTAGAATGGACAGAACCTGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: WSPQLGGPCHRMKSC*TASPLSCRMDRTCH Trigger: ATGACAGGTTCTGTCCATTCTACAAGACAGTGGGGATGCTGTCCAACATGATTTCATTCTATGACATGGCCCGCCGAGCTGTGGAGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| CDS TCA 90 bp | TATCCAAGCCCCAGAACACCTGAACAATACCCAGCGTTGCAGAAGTaGCTGGATCAGAAAAATCACCACCAGGTGGAGAAACTGCTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: YPSPRTPEQYPALQK*LDQKNHHQVEKLLL Trigger: TAGGAGCAGTTTCTCCACCTGGTGGTGATTTTTCTGATCCAGTCACTTCTGCAACGCTGGGTATTGTTCAGGTGTTCTGGGGCTTGGATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| CDS CCA 90 bp | ATAATTCCCAGGCGGCGCGATGTAAGTCACGCTTCCTCTGTTACGTaGGGGCAACATGATTTTGTGTTTGATGAGGGAGTTCTCATTGAC | + |
|
Preference number: 5 (lower is better) Translates to: IIPRRRDVSHASSVT*GQHDFVFDEGVLID Trigger: GTCAATGAGAACTCCCTCATCAAACACAAAATCATGTTGCCCCCACGTAACAGAGGAAGCGTGACTTACATCGCGCCGCCTGGGAATTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 ENSMUST00000124102.8 ENSMUST00000137557.8 |
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| CDS GCA 90 bp | GTCTTCAAGGCTACGGAATGCATTCTGCATATCTTCAAGAAGCTGTaGATAGTCGGCCTTGATCTTTGCCTCGCCATCTTTCACTGGATC | + |
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Preference number: 5 (lower is better) Translates to: VFKATECILHIFKKL*IVGLDLCLAIFHWI Trigger: GATCCAGTGAAAGATGGCGAGGCAAAGATCAAGGCCGACTATGCACAGCTTCTTGAAGATATGCAGAATGCATTCCGTAGCCTTGAAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| CDS TCA 90 bp | AGTACGGGGTCTCCAACAGAGACACCAGAAGTTTCTTCATACACCTaGATGGTGGCCATGTCACCTTCCAATCGAATAATTTCTCCAACC | + |
|
Preference number: 5 (lower is better) Translates to: STGSPTETPEVSSYT*MVAMSPSNRIISPT Trigger: GGTTGGAGAAATTATTCGATTGGAAGGTGACATGGCCACCATTCAGGTGTATGAAGAAACTTCTGGTGTCTCTGTTGGAGACCCCGTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 ENSMUST00000124102.8 ENSMUST00000137557.8 |
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| CDS-3UTR CAA 90 bp | AGGTTGCTGGTAGGTATAAGCAGACAGGTTTTGAAATCTTTCTCATCTCCGCTAGGGGGCAACATGATTTaGTGTTTGATGAGGGAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RLLVGISRQVLKSFSSPLGGNMI*CLMREF Trigger: GAACTCCCTCATCAAACACAAAATCATGTTGCCCCC...TAGCGGAGATGAGAAAGATTTCAAAACCTGTCTGCTTATACCTACCAGCAACCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| CDS-3UTR CAA 90 bp | GCTTGTCTGACTAAGTCTGAGGAAAAGAATGGCTATGATGTGGATCACATTTTCGACCATGTGATCTTATaGTCACTCTGGGCAGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ACLTKSEEKNGYDVDHIFDHVIL*SLWAVV Trigger: GACCACTGCCCAGAGTGACAATAAGATCACATGGTC...GAAAATGTGATCCACATCATAGCCATTCTTTTCCTCAGACTTAGTCAGACAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| CDS-3UTR CAA 90 bp | ATTGGTAAACTTGCTGTTTTCAGAATGTCAACAGGCAAACAAACACGTGACACGGGGGATGTAGATACTTaGGGTCTGACTGCTGATATC | + |
|
Preference number: 5 (lower is better) Translates to: IGKLAVFRMSTGKQTRDTGDVDT*GLTADI Trigger: GATATCAGCAGTCAGACCCAAAGTATCTACATCCCC...CGTGTCACGTGTTTGTTTGCCTGTTGACATTCTGAAAACAGCAAGTTTACCAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| CDS-3UTR CAA 90 bp | GCTTGTCTGACTAAGTCTGAGGAAAAGAATGGCTATGATGTGGATCACATTTTCCCAACCCGTAGGTTTTaGCTGGGTATAAACTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: ACLTKSEEKNGYDVDHIFPTRRF*LGINSH Trigger: ATGGGAGTTTATACCCAGCAAAAACCTACGGGTTGG...GAAAATGTGATCCACATCATAGCCATTCTTTTCCTCAGACTTAGTCAGACAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| CDS-3UTR CAA 90 bp | AGGTTGCTGGTAGGTATAAGCAGACAGGTTTTGAAATCTTTCTCATCTCCGCTATCACTGTTGGAGTACTaGGATAGAGACTGGGAAATC | + |
|
Preference number: 5 (lower is better) Translates to: RLLVGISRQVLKSFSSPLSLLEY*DRDWEI Trigger: GATTTCCCAGTCTCTATCCAAGTACTCCAACAGTGA...TAGCGGAGATGAGAAAGATTTCAAAACCTGTCTGCTTATACCTACCAGCAACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| CDS-3UTR CAA 90 bp | ACAGTCTTAGAGCAAGGAAGAAAACACATCTCGAATCCAGGACAACAAAAACAAGACCATGTGATCTTATaGTCACTCTGGGCAGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: TVLEQGRKHISNPGQQKQDHVIL*SLWAVV Trigger: GACCACTGCCCAGAGTGACAATAAGATCACATGGTC...TTGTTTTTGTTGTCCTGGATTCGAGATGTGTTTTCTTCCTTGCTCTAAGACTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| CDS-3UTR CAA 90 bp | GGAAGGGGTAGTCACCTTACATACAAGTTTACAGTATGGATCATGTTACAATGTGGGGGCAACATGATTTaGTGTTTGATGAGGGAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GRGSHLTYKFTVWIMLQCGGNMI*CLMREF Trigger: GAACTCCCTCATCAAACACAAAATCATGTTGCCCCC...ACATTGTAACATGATCCATACTGTAAACTTGTATGTAAGGTGACTACCCCTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| CDS-3UTR CAA 90 bp | AGTTTACTGGAGATGAGGGAAGGGGTAGTCACCTTACATACAAGTTTACAGTATTCACTGTTGGAGTACTaGGATAGAGACTGGGAAATC | + |
|
Preference number: 5 (lower is better) Translates to: SLLEMREGVVTLHTSLQYSLLEY*DRDWEI Trigger: GATTTCCCAGTCTCTATCCAAGTACTCCAACAGTGA...ATACTGTAAACTTGTATGTAAGGTGACTACCCCTTCCCTCATCTCCAGTAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| CDS-3UTR CAA 90 bp | GCTTGTCTGACTAAGTCTGAGGAAAAGAATGGCTATGATGTGGATCACATTTTCATGATGACGTCACTGTaGGAGTACTTGGATAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: ACLTKSEEKNGYDVDHIFMMTSL*EYLDRD Trigger: GTCTCTATCCAAGTACTCCAACAGTGACGTCATCAT...GAAAATGTGATCCACATCATAGCCATTCTTTTCCTCAGACTTAGTCAGACAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| CDS-3UTR CAA 90 bp | GCCAAGCTCTCTGAAGCGAGCCTTATTAAGCAAGTATGGGAATTATTATTTAAAGGGGATGTAGATACTTaGGGTCTGACTGCTGATATC | + |
|
Preference number: 5 (lower is better) Translates to: AKLSEASLIKQVWELLFKGDVDT*GLTADI Trigger: GATATCAGCAGTCAGACCCAAAGTATCTACATCCCC...TTTAAATAATAATTCCCATACTTGCTTAATAAGGCTCGCTTCAGAGAGCTTGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| CDS-3UTR CAA 90 bp | GGAAGGGGTAGTCACCTTACATACAAGTTTACAGTATGGATCATGTTACAATGTATGATGACGTCACTGTaGGAGTACTTGGATAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GRGSHLTYKFTVWIMLQCMMTSL*EYLDRD Trigger: GTCTCTATCCAAGTACTCCAACAGTGACGTCATCAT...ACATTGTAACATGATCCATACTGTAAACTTGTATGTAAGGTGACTACCCCTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| CDS-3UTR CAA 90 bp | ACAGTCTTAGAGCAAGGAAGAAAACACATCTCGAATCCAGGACAACAAAAACAAGGTATAAACTCCCATTaGATATCTCTGCTGAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TVLEQGRKHISNPGQQKQGINSH*ISLLRA Trigger: TGCTCTCAGCAGAGATATCAAATGGGAGTTTATACC...TTGTTTTTGTTGTCCTGGATTCGAGATGTGTTTTCTTCCTTGCTCTAAGACTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| CDS TCA 72 bp | AGGGCATCGAGGACTCTCTGGCCAGTAAGCAAGGGGTaGTTGGCGGGCAGCTTCTCAGTGACAGGCCGCACC | + |
|
Preference number: 6 (lower is better) Translates to: RASRTLWPVSKG*LAGSFSVTGRT Trigger: GGTGCGGCCTGTCACTGAGAAGCTGCCCGCCAATCACCCCTTGCTTACTGGCCAGAGAGTCCTCGATGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 ENSMUST00000137557.8 |
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| CDS GCA 72 bp | TCCCGGGACCCAGCTCGACCGAGAGAGGTTTACCAGTaGGGAGTACGGGGTCTCCAACAGAGACACCAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SRDPARPREVYQ*GVRGLQQRHQK Trigger: CTTCTGGTGTCTCTGTTGGAGACCCCGTACTCCGCACTGGTAAACCTCTCTCGGTCGAGCTGGGTCCCGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 ENSMUST00000124102.8 ENSMUST00000137557.8 |
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| CDS CAA 90 bp | GGGCAGCTTCTCAGTGACAGGCCGCACCTGCCGCACAGGCCACACTaGGACCATGCTGAACTTCTCCTTCACACCTTCAAACTCAAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: GQLLSDRPHLPHRPH*DHAELLLHTFKLKL Trigger: GAGCTTGAGTTTGAAGGTGTGAAGGAGAAGTTCAGCATGGTCCAAGTGTGGCCTGTGCGGCAGGTGCGGCCTGTCACTGAGAAGCTGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 ENSMUST00000137557.8 |
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| CDS CAA 72 bp | GAGGCCTCTCTCGCAGCCACAGGCATGTTGGAGGTGTaGGCTACCAGCGCTGTCCTCTTCATGATGGACTCT | + |
|
Preference number: 6 (lower is better) Translates to: EASLAATGMLEV*ATSAVLFMMDS Trigger: AGAGTCCATCATGAAGAGGACAGCGCTGGTAGCCAACACCTCCAACATGCCTGTGGCTGCGAGAGAGGCCTC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| CDS TCA 72 bp | GCCGCACCTGCCGCACAGGCCACACTTGGACCATGCTaGACTTCTCCTTCACACCTTCAAACTCAAGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: AAPAAQATLGPC*TSPSHLQTQAP Trigger: TGGAGCTTGAGTTTGAAGGTGTGAAGGAGAAGTTCAGCATGGTCCAAGTGTGGCCTGTGCGGCAGGTGCGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 ENSMUST00000137557.8 |
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| CDS GCA 72 bp | CCTTCCAATCGAATAATTTCTCCAACCAGCTCGCTGTaGCCCACTCTCACCAGCTCGTACATGGCAGCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: PSNRIISPTSSL*PTLTSSYMAAP Trigger: GGGCGCTGCCATGTACGAGCTGGTGAGAGTGGGGCACAGCGAGCTGGTTGGAGAAATTATTCGATTGGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 ENSMUST00000124102.8 ENSMUST00000137557.8 ENSMUST00000147025.2 |
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| CDS CAA 72 bp | CTCAGTGACAGGCCGCACCTGCCGCACAGGCCACACTaGGACCATGCTGAACTTCTCCTTCACACCTTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: LSDRPHLPHRPH*DHAELLLHTFK Trigger: TTTGAAGGTGTGAAGGAGAAGTTCAGCATGGTCCAAGTGTGGCCTGTGCGGCAGGTGCGGCCTGTCACTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 ENSMUST00000137557.8 |
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| CDS CAA 72 bp | CCCATGTGCTCCCGGATAATGGACCATGTGATCTTATaGTCACTCTGGGCAGTGGTCTCCACAGCTCGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: PMCSRIMDHVIL*SLWAVVSTARR Trigger: CCGCCGAGCTGTGGAGACCACTGCCCAGAGTGACAATAAGATCACATGGTCCATTATCCGGGAGCACATGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| CDS CAA 90 bp | AGAATCTCCCCCATGTGCTCCCGGATAATGGACCATGTGATCTTATaGTCACTCTGGGCAGTGGTCTCCACAGCTCGGCGGGCCATGTCA | + |
|
Preference number: 6 (lower is better) Translates to: RISPMCSRIMDHVIL*SLWAVVSTARRAMS Trigger: TGACATGGCCCGCCGAGCTGTGGAGACCACTGCCCAGAGTGACAATAAGATCACATGGTCCATTATCCGGGAGCACATGGGGGAGATTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| CDS CCA 72 bp | TCCCGGATAATGGACCATGTGATCTTATTGTCACTCTaGGCAGTGGTCTCCACAGCTCGGCGGGCCATGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SRIMDHVILLSL*AVVSTARRAMS Trigger: TGACATGGCCCGCCGAGCTGTGGAGACCACTGCCCAGAGTGACAATAAGATCACATGGTCCATTATCCGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| CDS GCA 72 bp | TTATCCGTCTCTGCTAAAGAGGCCTTTCCCACGAGCTaGACGATTTCTGCCAGATCCTCTTCTTCCTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LSVSAKEAFPTS*TISARSSSSCR Trigger: CCTGCAGGAAGAAGAGGATCTGGCAGAAATCGTGCAGCTCGTGGGAAAGGCCTCTTTAGCAGAGACGGATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| CDS TCA 72 bp | AGTGGTCTCCACAGCTCGGCGGGCCATGTCATAGAATaGAATCATGTTGGACAGCATCCCCACTGTCTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: SGLHSSAGHVIE*NHVGQHPHCLV Trigger: TACAAGACAGTGGGGATGCTGTCCAACATGATTTCATTCTATGACATGGCCCGCCGAGCTGTGGAGACCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| CDS CCA 72 bp | AGGCGGCGCGATGTAAGTCACGCTTCCTCTGTTACGTaGGGGCAACATGATTTTGTGTTTGATGAGGGAGTT | + |
|
Preference number: 6 (lower is better) Translates to: RRRDVSHASSVT*GQHDFVFDEGV Trigger: AACTCCCTCATCAAACACAAAATCATGTTGCCCCCACGTAACAGAGGAAGCGTGACTTACATCGCGCCGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 ENSMUST00000124102.8 ENSMUST00000137557.8 |
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| CDS CCA 72 bp | CAGCTCGGCGGGCCATGTCATAGAATGAAATCATGTTaGACAGCATCCCCACTGTCTTGTAGAATGGACAGA | + |
|
Preference number: 6 (lower is better) Translates to: QLGGPCHRMKSC*TASPLSCRMDR Trigger: TCTGTCCATTCTACAAGACAGTGGGGATGCTGTCCAACATGATTTCATTCTATGACATGGCCCGCCGAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| CDS CAA 72 bp | AGCAGACACATTGACTCCTCTGGGGATGTAGATACTTaGGGTCTGACTGCTGATATCCGACAGAGGTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SRHIDSSGDVDT*GLTADIRQRSL Trigger: CAGAGACCTCTGTCGGATATCAGCAGTCAGACCCAAAGTATCTACATCCCCAGAGGAGTCAATGTGTCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 ENSMUST00000124102.8 ENSMUST00000137557.8 |
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| CDS CAA 90 bp | TCTGCTGAGAGCAGACACATTGACTCCTCTGGGGATGTAGATACTTaGGGTCTGACTGCTGATATCCGACAGAGGTCTCTGTATACCATC | + |
|
Preference number: 6 (lower is better) Translates to: SAESRHIDSSGDVDT*GLTADIRQRSLYTI Trigger: GATGGTATACAGAGACCTCTGTCGGATATCAGCAGTCAGACCCAAAGTATCTACATCCCCAGAGGAGTCAATGTGTCTGCTCTCAGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 ENSMUST00000124102.8 ENSMUST00000137557.8 |
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| CDS TCA 72 bp | CCCAGAACACCTGAACAATACCCAGCGTTGCAGAAGTaGCTGGATCAGAAAAATCACCACCAGGTGGAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: PRTPEQYPALQK*LDQKNHHQVEK Trigger: TTTCTCCACCTGGTGGTGATTTTTCTGATCCAGTCACTTCTGCAACGCTGGGTATTGTTCAGGTGTTCTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| CDS CCA 72 bp | ATGATGACGTCACTGTTGGAGTACTTGGATAGAGACTaGGAAATCACAGTCTTTCCACAGCCAAAGGCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: MMTSLLEYLDRD*EITVFPQPKAP Trigger: AGGCGCCTTTGGCTGTGGAAAGACTGTGATTTCCCAGTCTCTATCCAAGTACTCCAACAGTGACGTCATCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| CDS GCA 72 bp | GCTACGGAATGCATTCTGCATATCTTCAAGAAGCTGTaGATAGTCGGCCTTGATCTTTGCCTCGCCATCTTT | + |
|
Preference number: 6 (lower is better) Translates to: ATECILHIFKKL*IVGLDLCLAIF Trigger: AAAGATGGCGAGGCAAAGATCAAGGCCGACTATGCACAGCTTCTTGAAGATATGCAGAATGCATTCCGTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 |
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| CDS CAA 72 bp | GTCACGCTTCCTCTGTTACGTGGGGGCAACATGATTTaGTGTTTGATGAGGGAGTTCTCATTGACAATCCCA | + |
|
Preference number: 6 (lower is better) Translates to: VTLPLLRGGNMI*CLMREFSLTIP Trigger: TGGGATTGTCAATGAGAACTCCCTCATCAAACACAAAATCATGTTGCCCCCACGTAACAGAGGAAGCGTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 ENSMUST00000124102.8 ENSMUST00000137557.8 |
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| CDS TCA 72 bp | CTCCTCTGGGGATGTAGATACTTTGGGTCTGACTGCTaGTATCCGACAGAGGTCTCTGTATACCATCAAAAA | + |
|
Preference number: 6 (lower is better) Translates to: LLWGCRYFGSDC*YPTEVSVYHQK Trigger: TTTTTGATGGTATACAGAGACCTCTGTCGGATATCAGCAGTCAGACCCAAAGTATCTACATCCCCAGAGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 ENSMUST00000124102.8 ENSMUST00000137557.8 |
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| CDS CAA 72 bp | CCAACCCGTAGGTTTTTGCTGGGTATAAACTCCCATTaGATATCTCTGCTGAGAGCAGACACATTGACTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PTRRFLLGINSH*ISLLRADTLTP Trigger: AGGAGTCAATGTGTCTGCTCTCAGCAGAGATATCAAATGGGAGTTTATACCCAGCAAAAACCTACGGGTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 ENSMUST00000124102.8 ENSMUST00000137557.8 |
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| CDS TCA 72 bp | TCTCCAACAGAGACACCAGAAGTTTCTTCATACACCTaGATGGTGGCCATGTCACCTTCCAATCGAATAATT | + |
|
Preference number: 6 (lower is better) Translates to: SPTETPEVSSYT*MVAMSPSNRII Trigger: AATTATTCGATTGGAAGGTGACATGGCCACCATTCAGGTGTATGAAGAAACTTCTGGTGTCTCTGTTGGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063661.13 ENSMUST00000114666.9 ENSMUST00000124102.8 ENSMUST00000137557.8 ENSMUST00000147025.2 |
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