Pregenerated sensors for ATP6V0D1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000013160Ensembl transcript IDs: ENSMUST00000013304.8
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCAAACAATCCCAGGACAATGCTACACCTCACCAGGTCAGACAAGTaGGCCCTGGGCTTCACCACAGCACACAGACACACACACAGTGCA | + |
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Preference number: 1 (lower is better) Translates to: ANNPRTMLHLTRSDK*ALGFTTAHRHTHSA Trigger: TGCACTGTGTGTGTGTCTGTGTGCTGTGGTGAAGCCCAGGGCTCACTTGTCTGACCTGGTGAGGTGTAGCATTGTCCTGGGATTGTTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| 3UTR GCA 90 bp | TTTATTGTCTCAGAGGGGCAGAGCGGAGGGAGAAGGCTACAAAGCTaGTTTCCCAATACCCCAAGAATACATATTCTCTACTCTTCCCAC | + |
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Preference number: 1 (lower is better) Translates to: FIVSEGQSGGRRLQS*FPNTPRIHILYSSH Trigger: GTGGGAAGAGTAGAGAATATGTATTCTTGGGGTATTGGGAAAGCAGCTTTGTAGCCTTCTCCCTCCGCTCTGCCCCTCTGAGACAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| 3UTR-3UTR TCA 90 bp | AAGTTTCTTAGACATGTCAGTGGCTGTAAACATAGGGCTGGGGGCCTCTCTGCTACCAGGTCAGACAAGTaGGCCCTGGGCTTCACCACA | + |
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Preference number: 2 (lower is better) Translates to: KFLRHVSGCKHRAGGLSATRSDK*ALGFTT Trigger: TGTGGTGAAGCCCAGGGCTCACTTGTCTGACCTGGT...AGCAGAGAGGCCCCCAGCCCTATGTTTACAGCCACTGACATGTCTAAGAAACTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGACACTGTCCCAGGGGTCCTTAGGCTAAGGAGGGACATGAAAGTCATACAATCCCAGAAGGGGTCATaGAAGCTGGGCAAACAATCC | + |
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Preference number: 2 (lower is better) Translates to: MDTVPGVLRLRRDMKVIQSQKGS*KLGKQS Trigger: GGATTGTTTGCCCAGCTTCCATGACCCCTTCTGGGA...TTGTATGACTTTCATGTCCCTCCTTAGCCTAAGGACCCCTGGGACAGTGTCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| 3UTR TCA 72 bp | CCCAGGACAATGCTACACCTCACCAGGTCAGACAAGTaGGCCCTGGGCTTCACCACAGCACACAGACACACA | + |
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Preference number: 3 (lower is better) Translates to: PRTMLHLTRSDK*ALGFTTAHRHT Trigger: TGTGTGTCTGTGTGCTGTGGTGAAGCCCAGGGCTCACTTGTCTGACCTGGTGAGGTGTAGCATTGTCCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| 3UTR CCA 72 bp | GTGGCTGTAAACATAGGGCTGGGGGCCTCTCTGCTCTaGAGGGAATCTTGGTCCATTCTTGATCAGGGGAGA | + |
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Preference number: 3 (lower is better) Translates to: VAVNIGLGASLL*RESWSILDQGR Trigger: TCTCCCCTGATCAAGAATGGACCAAGATTCCCTCCAGAGCAGAGAGGCCCCCAGCCCTATGTTTACAGCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| 3UTR CCA 72 bp | AGGCCTAAGAGTAGTCCCAGAAGGGGTCATGGAAGCTaGGCAAACAATCCCAGGACAATGCTACACCTCACC | + |
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Preference number: 3 (lower is better) Translates to: RPKSSPRRGHGS*ANNPRTMLHLT Trigger: GGTGAGGTGTAGCATTGTCCTGGGATTGTTTGCCCAGCTTCCATGACCCCTTCTGGGACTACTCTTAGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| 3UTR-3UTR CAA 90 bp | GCAGAGCGGAGGGAGAAGGCTACAAAGCTGCTTTCCCAATACCCCAAGAATACAAATCTTGGTCCATTCTaGATCAGGGGAGAGGTGCCT | + |
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Preference number: 3 (lower is better) Translates to: AERREKATKLLSQYPKNTNLGPF*IRGEVP Trigger: AGGCACCTCTCCCCTGATCAAGAATGGACCAAGATT...TGTATTCTTGGGGTATTGGGAAAGCAGCTTTGTAGCCTTCTCCCTCCGCTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| 3UTR TCA 72 bp | ATACATATTCTCTACTCTTCCCACAGGTTCTGGGGATaGCCTATGGACACTGTCCCAGGGGTCCTTAGGCTA | + |
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Preference number: 3 (lower is better) Translates to: IHILYSSHRFWG*PMDTVPGVLRL Trigger: TAGCCTAAGGACCCCTGGGACAGTGTCCATAGGTCATCCCCAGAACCTGTGGGAAGAGTAGAGAATATGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| 3UTR GCA 72 bp | TCAGAGGGGCAGAGCGGAGGGAGAAGGCTACAAAGCTaGTTTCCCAATACCCCAAGAATACATATTCTCTAC | + |
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Preference number: 3 (lower is better) Translates to: SEGQSGGRRLQS*FPNTPRIHILY Trigger: GTAGAGAATATGTATTCTTGGGGTATTGGGAAAGCAGCTTTGTAGCCTTCTCCCTCCGCTCTGCCCCTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS-3UTR TCA 90 bp | AGAGCGGAGGGAGAAGGCTACAAAGCTGCTTTCCCAATACCCCAAGAATACATAGGTAGTCCGCCTGGCTaGGCACCCCGGCCTTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: RAEGEGYKAAFPIPQEYIGSPPG*APRPSG Trigger: GCCTGAAGGCCGGGGTGCTCAGCCAGGCGGACTACC...TATGTATTCTTGGGGTATTGGGAAAGCAGCTTTGTAGCCTTCTCCCTCCGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS-3UTR GCA 90 bp | ACCTCACCAGGTCAGACAAGTGAGCCCTGGGCTTCACCACAGCACACAGACACAGATGGCGCTGGGCAATaGACTCAGCAATCCATACGA | + |
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Preference number: 4 (lower is better) Translates to: TSPGQTSEPWASPQHTDTDGAGQ*TQQSIR Trigger: TCGTATGGATTGCTGAGTGCATTGCCCAGCGCCATC...TGTGTCTGTGTGCTGTGGTGAAGCCCAGGGCTCACTTGTCTGACCTGGTGAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS-3UTR CCA 90 bp | CAATCCCAGGACAATGCTACACCTCACCAGGTCAGACAAGTGAGCCCTGGGCTTTGTAGTTGTCGATCTTaGCGCGATGGCGCTGGGCAA | + |
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Preference number: 4 (lower is better) Translates to: QSQDNATPHQVRQVSPGLCSCRS*RDGAGQ Trigger: TTGCCCAGCGCCATCGCGCCAAGATCGACAACTACA...AAGCCCAGGGCTCACTTGTCTGACCTGGTGAGGTGTAGCATTGTCCTGGGATTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS-3UTR GCA 90 bp | CTCTGCTCTGGAGGGAATCTTGGTCCATTCTTGATCAGGGGAGAGGTGCCTAACTTCACAGCCTCCATCTaGTCAAAGCTGCCTAGCGGA | + |
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Preference number: 4 (lower is better) Translates to: LCSGGNLGPFLIRGEVPNFTASI*SKLPSG Trigger: TCCGCTAGGCAGCTTTGAGCAGATGGAGGCTGTGAA...GTTAGGCACCTCTCCCCTGATCAAGAATGGACCAAGATTCCCTCCAGAGCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS-3UTR CCA 90 bp | CAGGACAATGCTACACCTCACCAGGTCAGACAAGTGAGCCCTGGGCTTCACCACGAGGTGACGCTTCATTaGCCAGGAAGTTGCCATAAT | + |
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Preference number: 4 (lower is better) Translates to: QDNATPHQVRQVSPGLHHEVTLH*PGSCHN Trigger: ATTATGGCAACTTCCTGGCCAATGAAGCGTCACCTC...GTGGTGAAGCCCAGGGCTCACTTGTCTGACCTGGTGAGGTGTAGCATTGTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS-3UTR CCA 90 bp | AGAGCGGAGGGAGAAGGCTACAAAGCTGCTTTCCCAATACCCCAAGAATACATAAGTGCGGGAAGAGCTTaGCACGGTCCTCCTTGGACA | + |
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Preference number: 4 (lower is better) Translates to: RAEGEGYKAAFPIPQEYISAGRA*HGPPWT Trigger: TGTCCAAGGAGGACCGTGCCAAGCTCTTCCCGCACT...TATGTATTCTTGGGGTATTGGGAAAGCAGCTTTGTAGCCTTCTCCCTCCGCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS-3UTR GCA 90 bp | GGGCCTCTCTGCTCTGGAGGGAATCTTGGTCCATTCTTGATCAGGGGAGAGGTGCATTGGCCAGGAAGTTaGCATAATCTGTACTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: GPLCSGGNLGPFLIRGEVHWPGS*HNLYSV Trigger: TACAGAGTACAGATTATGGCAACTTCCTGGCCAATG...CACCTCTCCCCTGATCAAGAATGGACCAAGATTCCCTCCAGAGCAGAGAGGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS-3UTR GCA 90 bp | ATGGACACTGTCCCAGGGGTCCTTAGGCTAAGGAGGGACATGAAAGTCATACAAATCTCATCAAGGTCCTaGTCTGAGATGCAGTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: MDTVPGVLRLRRDMKVIQISSRS*SEMQSW Trigger: CCAGGACTGCATCTCAGAGCAGGACCTTGATGAGAT...TTGTATGACTTTCATGTCCCTCCTTAGCCTAAGGACCCCTGGGACAGTGTCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS-3UTR CCA 90 bp | CATACAAGTTTCTTAGACATGTCAGTGGCTGTAAACATAGGGCTGGGGGCCTCTAAGCTGCCTAGCGGATaGCACTTGGGCACAAGTTCA | + |
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Preference number: 4 (lower is better) Translates to: HTSFLDMSVAVNIGLGASKLPSG*HLGTSS Trigger: TGAACTTGTGCCCAAGTGCCATCCGCTAGGCAGCTT...AGAGGCCCCCAGCCCTATGTTTACAGCCACTGACATGTCTAAGAAACTTGTATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS-3UTR CCA 90 bp | ATGGACACTGTCCCAGGGGTCCTTAGGCTAAGGAGGGACATGAAAGTCATACAATCAGCTATTGAACGCTaGTGCAGTGTGCCTGTGATT | + |
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Preference number: 4 (lower is better) Translates to: MDTVPGVLRLRRDMKVIQSAIER*CSVPVI Trigger: AATCACAGGCACACTGCACCAGCGTTCAATAGCTGA...TTGTATGACTTTCATGTCCCTCCTTAGCCTAAGGACCCCTGGGACAGTGTCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS-3UTR CCA 90 bp | CCAATACCCCAAGAATACATATTCTCTACTCTTCCCACAGGTTCTGGGGATGACACATGGCATCAGCTGTaGTCCCACCCAACAGAGTAC | + |
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Preference number: 4 (lower is better) Translates to: PIPQEYIFSTLPTGSGDDTWHQL*SHPTEY Trigger: GTACTCTGTTGGGTGGGACCACAGCTGATGCCATGT...GTCATCCCCAGAACCTGTGGGAAGAGTAGAGAATATGTATTCTTGGGGTATTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS-3UTR TCA 90 bp | CATACAAGTTTCTTAGACATGTCAGTGGCTGTAAACATAGGGCTGGGGGCCTCTATCAAGGTCCTGCTCTaGGATGCAGTCCTGGAAAAA | + |
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Preference number: 4 (lower is better) Translates to: HTSFLDMSVAVNIGLGASIKVLL*DAVLEK Trigger: TTTTTCCAGGACTGCATCTCAGAGCAGGACCTTGAT...AGAGGCCCCCAGCCCTATGTTTACAGCCACTGACATGTCTAAGAAACTTGTATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS-3UTR CCA 90 bp | GGAGGGAGAAGGCTACAAAGCTGCTTTCCCAATACCCCAAGAATACATATTCTCGTGTGTCCACCAGAATaGCATTGTAGAGCTCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: GGRRLQSCFPNTPRIHILVCPPE*HCRALQ Trigger: CTGCAGAGCTCTACAATGCCATTCTGGTGGACACAC...GAGAATATGTATTCTTGGGGTATTGGGAAAGCAGCTTTGTAGCCTTCTCCCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS-3UTR GCA 90 bp | TTTCCCAATACCCCAAGAATACATATTCTCTACTCTTCCCACAGGTTCTGGGGAGGCATTGTAGAGCTCTaGAGGTGTCTGTGCGATGTT | + |
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Preference number: 4 (lower is better) Translates to: FPNTPRIHILYSSHRFWGGIVEL*RCLCDV Trigger: AACATCGCACAGACACCTGCAGAGCTCTACAATGCC...TCCCCAGAACCTGTGGGAAGAGTAGAGAATATGTATTCTTGGGGTATTGGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS-3UTR TCA 90 bp | GGAGAAGGCTACAAAGCTGCTTTCCCAATACCCCAAGAATACATATTCTCTACTAGCCATTGTCCACGTTaGAATAGAGCTCCGGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: GEGYKAAFPIPQEYIFSTSHCPR*NRAPGR Trigger: TCTTCCCGGAGCTCTATTTCAACGTGGACAATGGCT...AGTAGAGAATATGTATTCTTGGGGTATTGGGAAAGCAGCTTTGTAGCCTTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS-3UTR TCA 90 bp | TACAAAGCTGCTTTCCCAATACCCCAAGAATACATATTCTCTACTCTTCCCACAGGTGCAGTGTGCCTGTaGTTAGCAGGATCACGTTGT | + |
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Preference number: 4 (lower is better) Translates to: YKAAFPIPQEYIFSTLPTGAVCL*LAGSRC Trigger: ACAACGTGATCCTGCTAATCACAGGCACACTGCACC...TGTGGGAAGAGTAGAGAATATGTATTCTTGGGGTATTGGGAAAGCAGCTTTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS-3UTR GCA 90 bp | TTTCCCAATACCCCAAGAATACATATTCTCTACTCTTCCCACAGGTTCTGGGGATCCAGGATTGCTACCTaGACCCTCAAAAAGCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: FPNTPRIHILYSSHRFWGSRIAT*TLKKQF Trigger: AAACTGCTTTTTGAGGGTGCAGGTAGCAATCCTGGA...TCCCCAGAACCTGTGGGAAGAGTAGAGAATATGTATTCTTGGGGTATTGGGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS-3UTR TCA 90 bp | AGAAGGCTACAAAGCTGCTTTCCCAATACCCCAAGAATACATATTCTCTACTCTTGTAGCTATAAGTTATaGAGTCCAGGAAGCTGGCGA | + |
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Preference number: 4 (lower is better) Translates to: RRLQSCFPNTPRIHILYSCSYKL*SPGSWR Trigger: TCGCCAGCTTCCTGGACTTCATAACTTATAGCTACA...AGAGTAGAGAATATGTATTCTTGGGGTATTGGGAAAGCAGCTTTGTAGCCTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS-3UTR GCA 90 bp | AGAAGGCTACAAAGCTGCTTTCCCAATACCCCAAGAATACATATTCTCTACTCTTCTTGTCTCCAGGATTaGTACCTGCACCCTCAAAAA | + |
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Preference number: 4 (lower is better) Translates to: RRLQSCFPNTPRIHILYSSCLQD*YLHPQK Trigger: TTTTTGAGGGTGCAGGTAGCAATCCTGGAGACAAGA...AGAGTAGAGAATATGTATTCTTGGGGTATTGGGAAAGCAGCTTTGTAGCCTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS-3UTR TCA 90 bp | GGAGAAGGCTACAAAGCTGCTTTCCCAATACCCCAAGAATACATATTCTCTACTAATCAGCTACATTCTTaGCCTGTTCATAGTCATCAG | + |
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Preference number: 4 (lower is better) Translates to: GEGYKAAFPIPQEYIFSTNQLHS*PVHSHQ Trigger: CTGATGACTATGAACAGGTCAAGAATGTAGCTGATT...AGTAGAGAATATGTATTCTTGGGGTATTGGGAAAGCAGCTTTGTAGCCTTCTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS GCA 90 bp | CTGCAGGTGTCTGTGCGATGTTCACAGCCTCCATCTGCTCAAAGCTaGCTAGCGGATGGCACTTGGGCACAAGTTCAGCTATTGAACGCT | + |
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Preference number: 5 (lower is better) Translates to: LQVSVRCSQPPSAQS*LADGTWAQVQLLNA Trigger: AGCGTTCAATAGCTGAACTTGTGCCCAAGTGCCATCCGCTAGGCAGCTTTGAGCAGATGGAGGCTGTGAACATCGCACAGACACCTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS CCA 90 bp | TGTGCGATGTTCACAGCCTCCATCTGCTCAAAGCTGCCTAGCGGATaGCACTTGGGCACAAGTTCAGCTATTGAACGCTGGTGCAGTGTG | + |
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Preference number: 5 (lower is better) Translates to: CAMFTASICSKLPSG*HLGTSSAIERWCSV Trigger: CACACTGCACCAGCGTTCAATAGCTGAACTTGTGCCCAAGTGCCATCCGCTAGGCAGCTTTGAGCAGATGGAGGCTGTGAACATCGCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS-3UTR CAA 90 bp | GCGGAGGGAGAAGGCTACAAAGCTGCTTTCCCAATACCCCAAGAATACATATTCCAGTGCGGGAAGAGCTaGGCACGGTCCTCCTTGGAC | + |
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Preference number: 5 (lower is better) Translates to: AEGEGYKAAFPIPQEYIFQCGKS*ARSSLD Trigger: GTCCAAGGAGGACCGTGCCAAGCTCTTCCCGCACTG...GAATATGTATTCTTGGGGTATTGGGAAAGCAGCTTTGTAGCCTTCTCCCTCCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS-3UTR CAA 90 bp | GTAGTCCCAGAAGGGGTCATGGAAGCTGGGCAAACAATCCCAGGACAATGCTACGCACAAGTTCAGCTATaGAACGCTGGTGCAGTGTGC | + |
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Preference number: 5 (lower is better) Translates to: VVPEGVMEAGQTIPGQCYAQVQL*NAGAVC Trigger: GCACACTGCACCAGCGTTCAATAGCTGAACTTGTGC...GTAGCATTGTCCTGGGATTGTTTGCCCAGCTTCCATGACCCCTTCTGGGACTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS-3UTR CAA 90 bp | ATCCCAGGACAATGCTACACCTCACCAGGTCAGACAAGTGAGCCCTGGGCTTCAGTCTTGTCTCCAGGATaGCTACCTGCACCCTCAAAA | + |
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Preference number: 5 (lower is better) Translates to: IPGQCYTSPGQTSEPWASVLSPG*LPAPSK Trigger: TTTTGAGGGTGCAGGTAGCAATCCTGGAGACAAGAC...TGAAGCCCAGGGCTCACTTGTCTGACCTGGTGAGGTGTAGCATTGTCCTGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS CCA 90 bp | CTGCCTAGCGGATGGCACTTGGGCACAAGTTCAGCTATTGAACGCTaGTGCAGTGTGCCTGTGATTAGCAGGATCACGTTGTCAATCATG | + |
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Preference number: 5 (lower is better) Translates to: LPSGWHLGTSSAIER*CSVPVISRITLSIM Trigger: CATGATTGACAACGTGATCCTGCTAATCACAGGCACACTGCACCAGCGTTCAATAGCTGAACTTGTGCCCAAGTGCCATCCGCTAGGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS-3UTR CAA 90 bp | GGGCCTCTCTGCTCTGGAGGGAATCTTGGTCCATTCTTGATCAGGGGAGAGGTGACTACCATCTTCTCCTaGAGCTTGTCATCGATGACT | + |
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Preference number: 5 (lower is better) Translates to: GPLCSGGNLGPFLIRGEVTTIFS*SLSSMT Trigger: AGTCATCGATGACAAGCTCAAGGAGAAGATGGTAGT...CACCTCTCCCCTGATCAAGAATGGACCAAGATTCCCTCCAGAGCAGAGAGGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS-3UTR CAA 90 bp | TCTCTACTCTTCCCACAGGTTCTGGGGATGACCTATGGACACTGTCCCAGGGGTTTCAGGAAGGCCAGCTaGTTTAGCTTCACCTCATGT | + |
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Preference number: 5 (lower is better) Translates to: SLLFPQVLGMTYGHCPRGFRKAS*FSFTSC Trigger: ACATGAGGTGAAGCTAAACAAGCTGGCCTTCCTGAA...ACCCCTGGGACAGTGTCCATAGGTCATCCCCAGAACCTGTGGGAAGAGTAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS-3UTR CAA 90 bp | CTCTGCTCTGGAGGGAATCTTGGTCCATTCTTGATCAGGGGAGAGGTGCCTAACTCTGTGCCGAAAGAGTaGATGGTGATGATGAAAGCG | + |
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Preference number: 5 (lower is better) Translates to: LCSGGNLGPFLIRGEVPNSVPKE*MVMMKA Trigger: CGCTTTCATCATCACCATCAACTCTTTCGGCACAGA...GTTAGGCACCTCTCCCCTGATCAAGAATGGACCAAGATTCCCTCCAGAGCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS TCA 90 bp | CCTCAAAAAGCAGTTTGTATTCCGGGTAGTAATCAGCTACATTCTTaGCCTGTTCATAGTCATCAGCCCGCGCCAGCTGAGCCAAGCCCT | + |
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Preference number: 5 (lower is better) Translates to: PQKAVCIPGSNQLHS*PVHSHQPAPAEPSP Trigger: AGGGCTTGGCTCAGCTGGCGCGGGCTGATGACTATGAACAGGTCAAGAATGTAGCTGATTACTACCCGGAATACAAACTGCTTTTTGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS-3UTR CAA 90 bp | GGAGAAGGCTACAAAGCTGCTTTCCCAATACCCCAAGAATACATATTCTCTACTTTGGCACGGTCCTCCTaGGACAGCTCTGTGCCGAAA | + |
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Preference number: 5 (lower is better) Translates to: GEGYKAAFPIPQEYIFSTLARSS*DSSVPK Trigger: TTTCGGCACAGAGCTGTCCAAGGAGGACCGTGCCAA...AGTAGAGAATATGTATTCTTGGGGTATTGGGAAAGCAGCTTTGTAGCCTTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS-3UTR CAA 90 bp | AGAGCGGAGGGAGAAGGCTACAAAGCTGCTTTCCCAATACCCCAAGAATACATAATCTTCTCCTTGAGCTaGTCATCGATGACTGACACC | + |
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Preference number: 5 (lower is better) Translates to: RAEGEGYKAAFPIPQEYIIFSLS*SSMTDT Trigger: GGTGTCAGTCATCGATGACAAGCTCAAGGAGAAGAT...TATGTATTCTTGGGGTATTGGGAAAGCAGCTTTGTAGCCTTCTCCCTCCGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS-3UTR CAA 90 bp | TACAAAGCTGCTTTCCCAATACCCCAAGAATACATATTCTCTACTCTTCCCACACGGTCCTCCAGGGTCTaGTCTCCAGGATTGCTACCT | + |
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Preference number: 5 (lower is better) Translates to: YKAAFPIPQEYIFSTLPTRSSRV*SPGLLP Trigger: AGGTAGCAATCCTGGAGACAAGACCCTGGAGGACCG...TGTGGGAAGAGTAGAGAATATGTATTCTTGGGGTATTGGGAAAGCAGCTTTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS CAA 72 bp | CGGCCACAGTGCGGGAAGAGCTTGGCACGGTCCTCCTaGGACAGCTCTGTGCCGAAAGAGTTGATGGTGATG | + |
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Preference number: 6 (lower is better) Translates to: RPQCGKSLARSS*DSSVPKELMVM Trigger: CATCACCATCAACTCTTTCGGCACAGAGCTGTCCAAGGAGGACCGTGCCAAGCTCTTCCCGCACTGTGGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS GCA 72 bp | TCTGCAGGTGTCTGTGCGATGTTCACAGCCTCCATCTaGTCAAAGCTGCCTAGCGGATGGCACTTGGGCACA | + |
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Preference number: 6 (lower is better) Translates to: SAGVCAMFTASI*SKLPSGWHLGT Trigger: TGTGCCCAAGTGCCATCCGCTAGGCAGCTTTGAGCAGATGGAGGCTGTGAACATCGCACAGACACCTGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS CCA 72 bp | CCTCCATCTGCTCAAAGCTGCCTAGCGGATGGCACTTaGGCACAAGTTCAGCTATTGAACGCTGGTGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: PPSAQSCLADGT*AQVQLLNAGAV Trigger: CACTGCACCAGCGTTCAATAGCTGAACTTGTGCCCAAGTGCCATCCGCTAGGCAGCTTTGAGCAGATGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS CAA 72 bp | GCCTCCATCTGCTCAAAGCTGCCTAGCGGATGGCACTaGGGCACAAGTTCAGCTATTGAACGCTGGTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: ASICSKLPSGWH*GTSSAIERWCS Trigger: ACTGCACCAGCGTTCAATAGCTGAACTTGTGCCCAAGTGCCATCCGCTAGGCAGCTTTGAGCAGATGGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS CAA 90 bp | ATGTTCACAGCCTCCATCTGCTCAAAGCTGCCTAGCGGATGGCACTaGGGCACAAGTTCAGCTATTGAACGCTGGTGCAGTGTGCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: MFTASICSKLPSGWH*GTSSAIERWCSVPV Trigger: CACAGGCACACTGCACCAGCGTTCAATAGCTGAACTTGTGCCCAAGTGCCATCCGCTAGGCAGCTTTGAGCAGATGGAGGCTGTGAACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS CAA 90 bp | AAGAGCTTGGCACGGTCCTCCTTGGACAGCTCTGTGCCGAAAGAGTaGATGGTGATGATGAAAGCGCGGCGGTCTGCTTCAAACTCTAGG | + |
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Preference number: 6 (lower is better) Translates to: KSLARSSLDSSVPKE*MVMMKARRSASNSR Trigger: CCTAGAGTTTGAAGCAGACCGCCGCGCTTTCATCATCACCATCAACTCTTTCGGCACAGAGCTGTCCAAGGAGGACCGTGCCAAGCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS GCA 72 bp | TCTGTGCGATGTTCACAGCCTCCATCTGCTCAAAGCTaGCTAGCGGATGGCACTTGGGCACAAGTTCAGCTA | + |
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Preference number: 6 (lower is better) Translates to: SVRCSQPPSAQS*LADGTWAQVQL Trigger: TAGCTGAACTTGTGCCCAAGTGCCATCCGCTAGGCAGCTTTGAGCAGATGGAGGCTGTGAACATCGCACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS GCA 72 bp | TGTAGTTGTCGATCTTGGCGCGATGGCGCTGGGCAATaGACTCAGCAATCCATACGATGTTGCGACATTCCT | + |
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Preference number: 6 (lower is better) Translates to: CSCRSWRDGAGQ*TQQSIRCCDIP Trigger: AGGAATGTCGCAACATCGTATGGATTGCTGAGTGCATTGCCCAGCGCCATCGCGCCAAGATCGACAACTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS CAA 90 bp | TGGTTTCTCATGTGGCGGAACTCTACTACCATCTTCTCCTTGAGCTaGTCATCGATGACTGACACCGTCAGAGGTGACGCTTCATTGGCC | + |
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Preference number: 6 (lower is better) Translates to: WFLMWRNSTTIFSLS*SSMTDTVRGDASLA Trigger: GGCCAATGAAGCGTCACCTCTGACGGTGTCAGTCATCGATGACAAGCTCAAGGAGAAGATGGTAGTAGAGTTCCGCCACATGAGAAACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS CAA 72 bp | ATGTGGCGGAACTCTACTACCATCTTCTCCTTGAGCTaGTCATCGATGACTGACACCGTCAGAGGTGACGCT | + |
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Preference number: 6 (lower is better) Translates to: MWRNSTTIFSLS*SSMTDTVRGDA Trigger: AGCGTCACCTCTGACGGTGTCAGTCATCGATGACAAGCTCAAGGAGAAGATGGTAGTAGAGTTCCGCCACAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS TCA 72 bp | GCAGTTTGTATTCCGGGTAGTAATCAGCTACATTCTTaGCCTGTTCATAGTCATCAGCCCGCGCCAGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: AVCIPGSNQLHS*PVHSHQPAPAE Trigger: CTCAGCTGGCGCGGGCTGATGACTATGAACAGGTCAAGAATGTAGCTGATTACTACCCGGAATACAAACTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS GCA 72 bp | ACACCGTCAGAGGTGACGCTTCATTGGCCAGGAAGTTaGCATAATCTGTACTCTGTAGGTGCAGCTTCAAGT | + |
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Preference number: 6 (lower is better) Translates to: TPSEVTLHWPGS*HNLYSVGAASS Trigger: ACTTGAAGCTGCACCTACAGAGTACAGATTATGGCAACTTCCTGGCCAATGAAGCGTCACCTCTGACGGTGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS CAA 72 bp | TTTCTCATGTGGCGGAACTCTACTACCATCTTCTCCTaGAGCTTGTCATCGATGACTGACACCGTCAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: FLMWRNSTTIFS*SLSSMTDTVRG Trigger: ACCTCTGACGGTGTCAGTCATCGATGACAAGCTCAAGGAGAAGATGGTAGTAGAGTTCCGCCACATGAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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| CDS TCA 72 bp | CAAGTTCAGCTATTGAACGCTGGTGCAGTGTGCCTGTaGTTAGCAGGATCACGTTGTCAATCATGTAGCTAT | + |
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Preference number: 6 (lower is better) Translates to: QVQLLNAGAVCL*LAGSRCQSCSY Trigger: ATAGCTACATGATTGACAACGTGATCCTGCTAATCACAGGCACACTGCACCAGCGTTCAATAGCTGAACTTG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013304.8 |
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