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Pregenerated sensors for ATP1B3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000032412

Ensembl transcript IDs: ENSMUST00000034983.7

Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTGGCAATTACACACAAAGAAGACAGGGCCCCCACTCTGCATGTTTaGGGTCGGGAGCTCACTGGTCCCTGTCTGGCGACCGTACATGGG +
Preference number: 1 (lower is better)
Translates to: LAITHKEDRAPTLHV*GRELTGPCLATVHG
Trigger: CCCATGTACGGTCGCCAGACAGGGACCAGTGAGCTCCCGACCCCAAACATGCAGAGTGGGGGCCCTGTCTTCTTTGTGTGTAATTGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034983.7
3UTR CAA 90 bp TTTGGCAATTACACACAAAGAAGACAGGGCCCCCACTCTGCATGTTaGGGGTCGGGAGCTCACTGGTCCCTGTCTGGCGACCGTACATGG +
Preference number: 2 (lower is better)
Translates to: FGNYTQRRQGPHSAC*GSGAHWSLSGDRTW
Trigger: CCATGTACGGTCGCCAGACAGGGACCAGTGAGCTCCCGACCCCAAACATGCAGAGTGGGGGCCCTGTCTTCTTTGTGTGTAATTGCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034983.7
3UTR-3UTR TCA 90 bp AAGAAACAGTCTGGAGCATACGGACAGGCACCACTCACACATGCGCAGAAGCAGTCTGGAAGCATGTTATaGTGTCACCCAAGTGTGTAC +
Preference number: 2 (lower is better)
Translates to: KKQSGAYGQAPLTHAQKQSGSML*CHPSVY
Trigger: GTACACACTTGGGTGACATCATAACATGCTTCCAGA...CTGCTTCTGCGCATGTGTGAGTGGTGCCTGTCCGTATGCTCCAGACTGTTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034983.7
3UTR-3UTR CCA 90 bp ACAGGCACCACTCACACATGCGCAGAAGCAGAGTCTACTTTCAGATCCACTTTAAAAGTCACTCGATGTTaGCAAGGTACCATTGTATCC +
Preference number: 2 (lower is better)
Translates to: TGTTHTCAEAESTFRSTLKVTRC*QGTIVS
Trigger: GGATACAATGGTACCTTGCCAACATCGAGTGACTTT...TAAAGTGGATCTGAAAGTAGACTCTGCTTCTGCGCATGTGTGAGTGGTGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034983.7
3UTR CCA 72 bp ACACACAAAGAAGACAGGGCCCCCACTCTGCATGTTTaGGGTCGGGAGCTCACTGGTCCCTGTCTGGCGACC +
Preference number: 3 (lower is better)
Translates to: THKEDRAPTLHV*GRELTGPCLAT
Trigger: GGTCGCCAGACAGGGACCAGTGAGCTCCCGACCCCAAACATGCAGAGTGGGGGCCCTGTCTTCTTTGTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034983.7
3UTR GCA 72 bp ACAGTCTGGAGCATACGGACAGGCACCACTCACACATaGGCAGAAGCAGAGTCTACTTTCAGATCCACTTTA +
Preference number: 3 (lower is better)
Translates to: TVWSIRTGTTHT*AEAESTFRSTL
Trigger: TAAAGTGGATCTGAAAGTAGACTCTGCTTCTGCGCATGTGTGAGTGGTGCCTGTCCGTATGCTCCAGACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034983.7
3UTR CCA 72 bp ACAACAGAAAGTTTGTCCTCTCAGCAAAATCAGATATaGTCTAGTTCACCTTGTAAGAAACAGTCTGGAGCA +
Preference number: 3 (lower is better)
Translates to: TTESLSSQQNQI*SSSPCKKQSGA
Trigger: TGCTCCAGACTGTTTCTTACAAGGTGAACTAGACCATATCTGATTTTGCTGAGAGGACAAACTTTCTGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034983.7
3UTR CAA 72 bp TACACACAAAGAAGACAGGGCCCCCACTCTGCATGTTaGGGGTCGGGAGCTCACTGGTCCCTGTCTGGCGAC +
Preference number: 4 (lower is better)
Translates to: YTQRRQGPHSAC*GSGAHWSLSGD
Trigger: GTCGCCAGACAGGGACCAGTGAGCTCCCGACCCCAAACATGCAGAGTGGGGGCCCTGTCTTCTTTGTGTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034983.7
CDS-3UTR CCA 90 bp CAGATATGGTCTAGTTCACCTTGTAAGAAACAGTCTGGAGCATACGGACAGGCATCGGCCAGGCTCTGGTaGAAGGATTTCTTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: QIWSSSPCKKQSGAYGQASARLW*KDFFSV
Trigger: GACTGAGAAGAAATCCTTCCACCAGAGCCTGGCCGA...TGCCTGTCCGTATGCTCCAGACTGTTTCTTACAAGGTGAACTAGACCATATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034983.7
CDS-3UTR GCA 90 bp TACGGACAGGCACCACTCACACATGCGCAGAAGCAGAGTCTACTTTCAGATCCAATAAGTTGCTATAGTTaGGTTTTCTTCCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: YGQAPLTHAQKQSLLSDPISCYS*VFFLWQ
Trigger: TTGCCAAAGGAAGAAAACGCAACTATAGCAACTTAT...TGGATCTGAAAGTAGACTCTGCTTCTGCGCATGTGTGAGTGGTGCCTGTCCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034983.7
3UTR CAA 72 bp TCATCCCTGTGTCTAAGATACCCGAATGTGGAAGACTaGATTCCAACACTCAAAGTCAGCCCAATAGTATTT +
Preference number: 4 (lower is better)
Translates to: SSLCLRYPNVED*IPTLKVSPIVF
Trigger: AAATACTATTGGGCTGACTTTGAGTGTTGGAATCAAGTCTTCCACATTCGGGTATCTTAGACACAGGGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034983.7
CDS GCA 90 bp AGTCACACCACTACATTCTTCAAGCAAGGAGACTGGAAACTGACATaGCCTATAGTCAGGACCATGCTGAATAAAAGGCGCTCCATCAGG +
Preference number: 5 (lower is better)
Translates to: SHTTTFFKQGDWKLT*PIVRTMLNKRRSIR
Trigger: CCTGATGGAGCGCCTTTTATTCAGCATGGTCCTGACTATAGGGCATGTCAGTTTCCAGTCTCCTTGCTTGAAGAATGTAGTGGTGTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034983.7
CDS-3UTR CAA 90 bp CAGATATGGTCTAGTTCACCTTGTAAGAAACAGTCTGGAGCATACGGACAGGCAACACGTCCCAAGAACTaGTCACGCTCATTCTTGTTT +
Preference number: 5 (lower is better)
Translates to: QIWSSSPCKKQSGAYGQATRPKN*SRSFLF
Trigger: AAACAAGAATGAGCGTGACAAGTTCTTGGGACGTGT...TGCCTGTCCGTATGCTCCAGACTGTTTCTTACAAGGTGAACTAGACCATATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034983.7
CDS-3UTR CAA 90 bp AGGCACCACTCACACATGCGCAGAAGCAGAGTCTACTTTCAGATCCACTTTATTTTGCGTTTTCTTCCTTaGGCAAACACGATATTTGTG +
Preference number: 5 (lower is better)
Translates to: RHHSHMRRSRVYFQIHFILRFLP*ANTIFV
Trigger: CACAAATATCGTGTTTGCCAAAGGAAGAAAACGCAA...AATAAAGTGGATCTGAAAGTAGACTCTGCTTCTGCGCATGTGTGAGTGGTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034983.7
CDS CCA 90 bp AAAATTAGCATCAGTCACACCACTACATTCTTCAAGCAAGGAGACTaGAAACTGACATGCCCTATAGTCAGGACCATGCTGAATAAAAGG +
Preference number: 5 (lower is better)
Translates to: KISISHTTTFFKQGD*KLTCPIVRTMLNKR
Trigger: CCTTTTATTCAGCATGGTCCTGACTATAGGGCATGTCAGTTTCCAGTCTCCTTGCTTGAAGAATGTAGTGGTGTGACTGATGCTAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034983.7
CDS CCA 72 bp ATCAGTCACACCACTACATTCTTCAAGCAAGGAGACTaGAAACTGACATGCCCTATAGTCAGGACCATGCTG +
Preference number: 6 (lower is better)
Translates to: ISHTTTFFKQGD*KLTCPIVRTML
Trigger: CAGCATGGTCCTGACTATAGGGCATGTCAGTTTCCAGTCTCCTTGCTTGAAGAATGTAGTGGTGTGACTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034983.7
CDS CCA 72 bp TGGTCTCGATATTTCGGAACTTCATCATTCAGAGTCTaGAGCATGGCCCACATTGTGAATGTGAAGAGTGCA +
Preference number: 6 (lower is better)
Translates to: WSRYFGTSSFRV*SMAHIVNVKSA
Trigger: TGCACTCTTCACATTCACAATGTGGGCCATGCTCCAGACTCTGAATGATGAAGTTCCGAAATATCGAGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034983.7
CDS TCA 72 bp CAACCAACTTTTTGTAAGTCTGTGGCTCAGACATGCTaGATGTATATTCCAAGGCAGTCTGCGGTTTGGGAA +
Preference number: 6 (lower is better)
Translates to: QPTFCKSVAQTC*MYIPRQSAVWE
Trigger: TTCCCAAACCGCAGACTGCCTTGGAATATACATTCAGCATGTCTGAGCCACAGACTTACAAAAAGTTGGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034983.7