Pregenerated sensors for ATP1A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000007097Ensembl transcript IDs: ENSMUST00000085913.11, ENSMUST00000097464.4
Found 226 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTGTCTCCCATCCCCACCGACTCCTGCAGGAATGTTCACCATCTTaGTCCTCACCTCAGTGCACAGTGTCTCACCTTCTGCCCACCACA | + |
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Preference number: 1 (lower is better) Translates to: PVSHPHRLLQECSPS*SSPQCTVSHLLPTT Trigger: TGTGGTGGGCAGAAGGTGAGACACTGTGCACTGAGGTGAGGAGCAAGATGGTGAACATTCCTGCAGGAGTCGGTGGGGATGGGAGACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR CCA 90 bp | GCAAACCTGAGCCCCGGGAGCTTAGGTGAGCTGGTGTTGGAATCCTaGCCTATGTGGGTTGGTGACTATGTACAGAGGCCTCTGCCTGGT | + |
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Preference number: 1 (lower is better) Translates to: ANLSPGSLGELVLES*PMWVGDYVQRPLPG Trigger: ACCAGGCAGAGGCCTCTGTACATAGTCACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACCTAAGCTCCCGGGGCTCAGGTTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
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| 3UTR CCA 90 bp | GTTCCTGACTGGCCTTGGCTGGGAGACAGACCTAATCTCTCCGCCTaGCTTCCTTTTCTGGCCCCAGGCTCTTGTACTCACAGAAGGAGA | + |
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Preference number: 1 (lower is better) Translates to: VPDWPWLGDRPNLSA*LPFLAPGSCTHRRR Trigger: TCTCCTTCTGTGAGTACAAGAGCCTGGGGCCAGAAAAGGAAGCCAGGCGGAGAGATTAGGTCTGTCTCCCAGCCAAGGCCAGTCAGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR GCA 90 bp | CACCGACTCCTGCAGGAATGTTCACCATCTTGCTCCTCACCTCAGTaGACAGTGTCTCACCTTCTGCCCACCACATGCATGCTCTGCGAA | + |
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Preference number: 1 (lower is better) Translates to: HRLLQECSPSCSSPQ*TVSHLLPTTCMLCE Trigger: TTCGCAGAGCATGCATGTGGTGGGCAGAAGGTGAGACACTGTGCACTGAGGTGAGGAGCAAGATGGTGAACATTCCTGCAGGAGTCGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR GCA 90 bp | TGCTCCTCACCTCAGTGCACAGTGTCTCACCTTCTGCCCACCACATaGATGCTCTGCGAAAAGGTCTCAGATACCTACTCAGGGAGACCT | + |
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Preference number: 1 (lower is better) Translates to: CSSPQCTVSHLLPTT*MLCEKVSDTYSGRP Trigger: AGGTCTCCCTGAGTAGGTATCTGAGACCTTTTCGCAGAGCATGCATGTGGTGGGCAGAAGGTGAGACACTGTGCACTGAGGTGAGGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR GCA 90 bp | CCTCACCTCAGTGCACAGTGTCTCACCTTCTGCCCACCACATGCATaGTCTGCGAAAAGGTCTCAGATACCTACTCAGGGAGACCTCAAT | + |
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Preference number: 1 (lower is better) Translates to: PHLSAQCLTFCPPHA*SAKRSQIPTQGDLN Trigger: ATTGAGGTCTCCCTGAGTAGGTATCTGAGACCTTTTCGCAGAGCATGCATGTGGTGGGCAGAAGGTGAGACACTGTGCACTGAGGTGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR GCA 90 bp | GTTCACCATCTTGCTCCTCACCTCAGTGCACAGTGTCTCACCTTCTaGCCACCACATGCATGCTCTGCGAAAAGGTCTCAGATACCTACT | + |
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Preference number: 1 (lower is better) Translates to: VHHLAPHLSAQCLTF*PPHACSAKRSQIPT Trigger: AGTAGGTATCTGAGACCTTTTCGCAGAGCATGCATGTGGTGGGCAGAAGGTGAGACACTGTGCACTGAGGTGAGGAGCAAGATGGTGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR CCA 90 bp | ACTACAGTGAGAGTTGTAATAAAGGGGCCGGTACACGTCTTGGACTaGGGCAGGCTTTTCATGGTTAGGCTGAGACTTGAGAGTGGGTTG | + |
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Preference number: 1 (lower is better) Translates to: TTVRVVIKGPVHVLD*GRLFMVRLRLESGL Trigger: CAACCCACTCTCAAGTCTCAGCCTAACCATGAAAAGCCTGCCCCAGTCCAAGACGTGTACCGGCCCCTTTATTACAACTCTCACTGTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR GCA 90 bp | TCTGGAAAGCCAGGGATGTCCTGGAAACTTTTCTACACTGATTCCTaGCAATGGCCAAGAGAGCCTTTTCCAGGACTAACTAGGCAGTAC | + |
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Preference number: 1 (lower is better) Translates to: SGKPGMSWKLFYTDS*QWPREPFPGLTRQY Trigger: GTACTGCCTAGTTAGTCCTGGAAAAGGCTCTCTTGGCCATTGGCAGGAATCAGTGTAGAAAAGTTTCCAGGACATCCCTGGCTTTCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR CCA 90 bp | TTTACCTCATTCCCTAAAGATGGCGCTGGGTACAGTATACGCTATTaGTCAGCACTGACTTGGCTGTTGTGGCCCCAGAACAAAACCTCT | + |
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Preference number: 1 (lower is better) Translates to: FTSFPKDGAGYSIRY*SALTWLLWPQNKTS Trigger: AGAGGTTTTGTTCTGGGGCCACAACAGCCAAGTCAGTGCTGACCAATAGCGTATACTGTACCCAGCGCCATCTTTAGGGAATGAGGTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR GCA 90 bp | ATGTCTAAAGTGTCTGACAGTGTCATGAGCTACGCTGATTCTGCATaGTCTGGAAAGCCAGGGATGTCCTGGAAACTTTTCTACACTGAT | + |
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Preference number: 1 (lower is better) Translates to: MSKVSDSVMSYADSA*SGKPGMSWKLFYTD Trigger: ATCAGTGTAGAAAAGTTTCCAGGACATCCCTGGCTTTCCAGAGCATGCAGAATCAGCGTAGCTCATGACACTGTCAGACACTTTAGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR GCA 90 bp | CTTGTCTTGACCTTCATATTCCCACCTCAAGCCTTCCAGTTTCCTTaGTGTTTCTCAGTTGCTTGGCTCATTCATCTAGGTACATCTATG | + |
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Preference number: 1 (lower is better) Translates to: LVLTFIFPPQAFQFP*CFSVAWLIHLGTSM Trigger: CATAGATGTACCTAGATGAATGAGCCAAGCAACTGAGAAACAGCAAGGAAACTGGAAGGCTTGAGGTGGGAATATGAAGGTCAAGACAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR CCA 90 bp | CCAGAGCCTACCCCACCTACCTGGAGGCTGAAGATGACAAACCTGTaGTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT | + |
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Preference number: 1 (lower is better) Translates to: PEPTPPTWRLKMTNL*SFFPFFLSFFLSFF Trigger: AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAAGAAAGACCACAGGTTTGTCATCTTCAGCCTCCAGGTAGGTGGGGTAGGCTCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR TCA 90 bp | AATATGGTGTCCCATTTAGACTTCCAACTGAAGGCCACACATGACTaGAAAAGTTCAAGGTATTTATGGGTAAAGCAAAACTCCACTGTG | + |
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Preference number: 1 (lower is better) Translates to: NMVSHLDFQLKATHD*KSSRYLWVKQNSTV Trigger: CACAGTGGAGTTTTGCTTTACCCATAAATACCTTGAACTTTTTCAGTCATGTGTGGCCTTCAGTTGGAAGTCTAAATGGGACACCATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR-3UTR CCA 90 bp | TGGACCCTTAGCCACTCTTCCCTGTCTTGGACAAACCCTTATGGCTCCCGGTGGAGCCCAGCTCCCCTCTaGTTCCTGACTGGCCTTGGC | + |
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Preference number: 2 (lower is better) Translates to: WTLSHSSLSWTNPYGSRWSPAPL*FLTGLG Trigger: GCCAAGGCCAGTCAGGAACCAGAGGGGAGCTGGGCT...CCACCGGGAGCCATAAGGGTTTGTCCAAGACAGGGAAGAGTGGCTAAGGGTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR CAA 90 bp | CCCTGTCTCCCATCCCCACCGACTCCTGCAGGAATGTTCACCATCTaGCTCCTCACCTCAGTGCACAGTGTCTCACCTTCTGCCCACCAC | + |
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Preference number: 2 (lower is better) Translates to: PCLPSPPTPAGMFTI*LLTSVHSVSPSAHH Trigger: GTGGTGGGCAGAAGGTGAGACACTGTGCACTGAGGTGAGGAGCAAGATGGTGAACATTCCTGCAGGAGTCGGTGGGGATGGGAGACAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR-3UTR TCA 90 bp | CTTGGCTGGGAGACAGACCTAATCTCTCCGCCTGGCTTCCTTTTCTGGCCCCAGGGGATGGGAAGGATCTaGAGAGGTGATCTGTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: LGWETDLISPPGFLFWPQGMGRI*RGDLSQ Trigger: CTGGGACAGATCACCTCTTCAGATCCTTCCCATCCC...CTGGGGCCAGAAAAGGAAGCCAGGCGGAGAGATTAGGTCTGTCTCCCAGCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR-3UTR GCA 90 bp | CTTGGCTGGGAGACAGACCTAATCTCTCCGCCTGGCTTCCTTTTCTGGCCCCAGCTTAGTTCCCTCAGGTaGCTCCTTCTGACTCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: LGWETDLISPPGFLFWPQLSSLR*LLLTPQ Trigger: CTGGGGAGTCAGAAGGAGGCACCTGAGGGAACTAAG...CTGGGGCCAGAAAAGGAAGCCAGGCGGAGAGATTAGGTCTGTCTCCCAGCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR-3UTR TCA 90 bp | CTTGGCTGGGAGACAGACCTAATCTCTCCGCCTGGCTTCCTTTTCTGGCCCCAGGTCACTGACACTTGGTaGCCTGAGAGGCTTTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: LGWETDLISPPGFLFWPQVTDTW*PERLSS Trigger: TGAGGAAAGCCTCTCAGGTCACCAAGTGTCAGTGAC...CTGGGGCCAGAAAAGGAAGCCAGGCGGAGAGATTAGGTCTGTCTCCCAGCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR-3UTR CCA 90 bp | CTTGGCTGGGAGACAGACCTAATCTCTCCGCCTGGCTTCCTTTTCTGGCCCCAGGACCTGTGGAGCAGCTaGAGCAGTCTCCTCAAGTTT | + |
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Preference number: 2 (lower is better) Translates to: LGWETDLISPPGFLFWPQDLWSS*SSLLKF Trigger: AAACTTGAGGAGACTGCTCCAGCTGCTCCACAGGTC...CTGGGGCCAGAAAAGGAAGCCAGGCGGAGAGATTAGGTCTGTCTCCCAGCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR-3UTR CCA 90 bp | TGGACCCTTAGCCACTCTTCCCTGTCTTGGACAAACCCTTATGGCTCCCGGTGGCCTAATCTCTCCGCCTaGCTTCCTTTTCTGGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: WTLSHSSLSWTNPYGSRWPNLSA*LPFLAP Trigger: TGGGGCCAGAAAAGGAAGCCAGGCGGAGAGATTAGG...CCACCGGGAGCCATAAGGGTTTGTCCAAGACAGGGAAGAGTGGCTAAGGGTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR-3UTR GCA 90 bp | CTTGGCTGGGAGACAGACCTAATCTCTCCGCCTGGCTTCCTTTTCTGGCCCCAGGAATGGGAAGAGGAATaGAGCCAAGGGTCACTGACA | + |
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Preference number: 2 (lower is better) Translates to: LGWETDLISPPGFLFWPQEWEEE*SQGSLT Trigger: TGTCAGTGACCCTTGGCTGCATTCCTCTTCCCATTC...CTGGGGCCAGAAAAGGAAGCCAGGCGGAGAGATTAGGTCTGTCTCCCAGCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR-3UTR CCA 90 bp | CTTGGCTGGGAGACAGACCTAATCTCTCCGCCTGGCTTCCTTTTCTGGCCCCAGTGTAGCAGAGTGGGATaGGAAGGATCTGAAGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: LGWETDLISPPGFLFWPQCSRVG*EGSEEV Trigger: CACCTCTTCAGATCCTTCCCATCCCACTCTGCTACA...CTGGGGCCAGAAAAGGAAGCCAGGCGGAGAGATTAGGTCTGTCTCCCAGCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR-3UTR CCA 90 bp | TGGACCCTTAGCCACTCTTCCCTGTCTTGGACAAACCCTTATGGCTCCCGGTGGGTTCCTGACTGGCCTTaGCTGGGAGACAGACCTAAT | + |
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Preference number: 2 (lower is better) Translates to: WTLSHSSLSWTNPYGSRWVPDWP*LGDRPN Trigger: ATTAGGTCTGTCTCCCAGCCAAGGCCAGTCAGGAAC...CCACCGGGAGCCATAAGGGTTTGTCCAAGACAGGGAAGAGTGGCTAAGGGTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR CAA 90 bp | AGTTCCTTAGCAAACCTGAGCCCCGGGAGCTTAGGTGAGCTGGTGTaGGAATCCTGGCCTATGTGGGTTGGTGACTATGTACAGAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: SSLANLSPGSLGELV*ESWPMWVGDYVQRP Trigger: AGGCCTCTGTACATAGTCACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACCTAAGCTCCCGGGGCTCAGGTTTGCTAAGGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
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| 3UTR-3UTR GCA 90 bp | CTTGGCTGGGAGACAGACCTAATCTCTCCGCCTGGCTTCCTTTTCTGGCCCCAGTTATTTACCCAAGGCTaGCATCTTAGTTCCCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: LGWETDLISPPGFLFWPQLFTQG*HLSSLR Trigger: CCTGAGGGAACTAAGATGGCAGCCTTGGGTAAATAA...CTGGGGCCAGAAAAGGAAGCCAGGCGGAGAGATTAGGTCTGTCTCCCAGCCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR-3UTR GCA 90 bp | TGGACCCTTAGCCACTCTTCCCTGTCTTGGACAAACCCTTATGGCTCCCGGTGGTTCTACACTGATTCCTaGCAATGGCCAAGAGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: WTLSHSSLSWTNPYGSRWFYTDS*QWPREP Trigger: AGGCTCTCTTGGCCATTGGCAGGAATCAGTGTAGAA...CCACCGGGAGCCATAAGGGTTTGTCCAAGACAGGGAAGAGTGGCTAAGGGTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR-3UTR CCA 90 bp | GTCATGAGCTACGCTGATTCTGCATGCTCTGGAAAGCCAGGGATGTCCTGGAAAGAGCACAGGGAGAAGTaGCAGCTAATGGGGCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: VMSYADSACSGKPGMSWKEHREK*QLMGLS Trigger: TGAGAGCCCCATTAGCTGCCACTTCTCCCTGTGCTC...TTTCCAGGACATCCCTGGCTTTCCAGAGCATGCAGAATCAGCGTAGCTCATGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR-3UTR CCA 90 bp | TGGACCCTTAGCCACTCTTCCCTGTCTTGGACAAACCCTTATGGCTCCCGGTGGGAAAATGTAGCAGAGTaGGATGGGAAGGATCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: WTLSHSSLSWTNPYGSRWENVAE*DGKDLK Trigger: CTTCAGATCCTTCCCATCCCACTCTGCTACATTTTC...CCACCGGGAGCCATAAGGGTTTGTCCAAGACAGGGAAGAGTGGCTAAGGGTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR-3UTR TCA 90 bp | CTGGAAAGCCAGGGATGTCCTGGAAACTTTTCTACACTGATTCCTGCCAATGGCACCTTCTGTGACTCCTaGGCCTTATGGACAGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: LESQGCPGNFSTLIPANGTFCDS*ALWTER Trigger: CCTCTCTGTCCATAAGGCTCAGGAGTCACAGAAGGT...GCCATTGGCAGGAATCAGTGTAGAAAAGTTTCCAGGACATCCCTGGCTTTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR-3UTR TCA 90 bp | GCTCTGCGAAAAGGTCTCAGATACCTACTCAGGGAGACCTCAATGATGTCTGCAAGGCAGTACCGGAAATaGCGTGGGTTCAGCAGATGT | + |
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Preference number: 2 (lower is better) Translates to: ALRKGLRYLLRETSMMSARQYRK*RGFSRC Trigger: ACATCTGCTGAACCCACGTCATTTCCGGTACTGCCT...TGCAGACATCATTGAGGTCTCCCTGAGTAGGTATCTGAGACCTTTTCGCAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR-3UTR CCA 90 bp | GCTCTGCGAAAAGGTCTCAGATACCTACTCAGGGAGACCTCAATGATGTCTGCACCTACCCCACCTACCTaGAGGCTGAAGATGACAAAC | + |
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Preference number: 2 (lower is better) Translates to: ALRKGLRYLLRETSMMSAPTPPT*RLKMTN Trigger: GTTTGTCATCTTCAGCCTCCAGGTAGGTGGGGTAGG...TGCAGACATCATTGAGGTCTCCCTGAGTAGGTATCTGAGACCTTTTCGCAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR CAA 90 bp | TCAAGGTATTTATGGGTAAAGCAAAACTCCACTGTGGTGAGACAGTaGCCCTTGGGAGGCCCGTGGCCCTGGCCTAATGCTTGTCTTTTT | + |
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Preference number: 2 (lower is better) Translates to: SRYLWVKQNSTVVRQ*PLGGPWPWPNACLF Trigger: AAAAAGACAAGCATTAGGCCAGGGCCACGGGCCTCCCAAGGGCAACTGTCTCACCACAGTGGAGTTTTGCTTTACCCATAAATACCTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR-3UTR TCA 90 bp | GCTCTGCGAAAAGGTCTCAGATACCTACTCAGGGAGACCTCAATGATGTCTGCAGCTCTCAGAACAGTGTaGGGCCACAGAGAACTTACT | + |
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Preference number: 2 (lower is better) Translates to: ALRKGLRYLLRETSMMSAALRTV*GHRELT Trigger: AGTAAGTTCTCTGTGGCCTCACACTGTTCTGAGAGC...TGCAGACATCATTGAGGTCTCCCTGAGTAGGTATCTGAGACCTTTTCGCAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR-3UTR CCA 90 bp | CCAGTACCACAGTCTGAGGGGAAGGCCAATGTTAAGTATAGAAATCAACCATGGGGAGGCCCGTGGCCCTaGCCTAATGCTTGTCTTTTT | + |
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Preference number: 2 (lower is better) Translates to: PVPQSEGKANVKYRNQPWGGPWP*PNACLF Trigger: AAAAAGACAAGCATTAGGCCAGGGCCACGGGCCTCC...CCATGGTTGATTTCTATACTTAACATTGGCCTTCCCCTCAGACTGTGGTACTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR-3UTR CCA 90 bp | GCTCTGCGAAAAGGTCTCAGATACCTACTCAGGGAGACCTCAATGATGTCTGCACACTCTTCCCTGTCTTaGACAAACCCTTATGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: ALRKGLRYLLRETSMMSAHSSLS*TNPYGS Trigger: GGAGCCATAAGGGTTTGTCCAAGACAGGGAAGAGTG...TGCAGACATCATTGAGGTCTCCCTGAGTAGGTATCTGAGACCTTTTCGCAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR-3UTR TCA 90 bp | GCTCTGCGAAAAGGTCTCAGATACCTACTCAGGGAGACCTCAATGATGTCTGCAGGGTGTCGATCTGTTTaGATAATACAGGTGAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: ALRKGLRYLLRETSMMSAGCRSV*IIQVRV Trigger: CACCCTCACCTGTATTATTCAAACAGATCGACACCC...TGCAGACATCATTGAGGTCTCCCTGAGTAGGTATCTGAGACCTTTTCGCAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR-3UTR CCA 90 bp | TGGACCCTTAGCCACTCTTCCCTGTCTTGGACAAACCCTTATGGCTCCCGGTGGTATAGAAATCAACCATaGGAGCAGTTTCTCTTGTCA | + |
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Preference number: 2 (lower is better) Translates to: WTLSHSSLSWTNPYGSRWYRNQP*EQFLLS Trigger: TGACAAGAGAAACTGCTCCCATGGTTGATTTCTATA...CCACCGGGAGCCATAAGGGTTTGTCCAAGACAGGGAAGAGTGGCTAAGGGTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR CAA 90 bp | TATTTATGGGTAAAGCAAAACTCCACTGTGGTGAGACAGTTGCCCTaGGGAGGCCCGTGGCCCTGGCCTAATGCTTGTCTTTTTCTTTTT | + |
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Preference number: 2 (lower is better) Translates to: YLWVKQNSTVVRQLP*GGPWPWPNACLFLF Trigger: AAAAAGAAAAAGACAAGCATTAGGCCAGGGCCACGGGCCTCCCAAGGGCAACTGTCTCACCACAGTGGAGTTTTGCTTTACCCATAAATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR-3UTR GCA 90 bp | CCAGTACCACAGTCTGAGGGGAAGGCCAATGTTAAGTATAGAAATCAACCATGGTACGCTGATTCTGCATaGTCTGGAAAGCCAGGGATG | + |
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Preference number: 2 (lower is better) Translates to: PVPQSEGKANVKYRNQPWYADSA*SGKPGM Trigger: CATCCCTGGCTTTCCAGAGCATGCAGAATCAGCGTA...CCATGGTTGATTTCTATACTTAACATTGGCCTTCCCCTCAGACTGTGGTACTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR-3UTR CCA 90 bp | GCTCTGCGAAAAGGTCTCAGATACCTACTCAGGGAGACCTCAATGATGTCTGCACTATCATGTGGTTGCTaGGAATTGAACTCAGGACCT | + |
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Preference number: 2 (lower is better) Translates to: ALRKGLRYLLRETSMMSALSCGC*ELNSGP Trigger: AGGTCCTGAGTTCAATTCCCAGCAACCACATGATAG...TGCAGACATCATTGAGGTCTCCCTGAGTAGGTATCTGAGACCTTTTCGCAGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR-3UTR CCA 90 bp | CCAGTACCACAGTCTGAGGGGAAGGCCAATGTTAAGTATAGAAATCAACCATGGGCTACTCTGACGAGATaGGAATTTGGTTTGCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: PVPQSEGKANVKYRNQPWATLTR*EFGLLV Trigger: CACCAGCAAACCAAATTCCCATCTCGTCAGAGTAGC...CCATGGTTGATTTCTATACTTAACATTGGCCTTCCCCTCAGACTGTGGTACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR-3UTR TCA 90 bp | ACTCTGAGACTAAGTATACCGCTCCTAACAATATTGTTTATGCTCTTCATTTACTCAGGTGCCTCCTTCTaGCTCCCCAGTCCCTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: TLRLSIPLLTILFMLFIYSGASF*LPSPSL Trigger: AAGGGAGGGACTGGGGAGTCAGAAGGAGGCACCTGA...GTAAATGAAGAGCATAAACAATATTGTTAGGAGCGGTATACTTAGTCTCAGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR-3UTR CCA 90 bp | GCTCTGCGAAAAGGTCTCAGATACCTACTCAGGGAGACCTCAATGATGTCTGCAAAGATGACAAACCTGTaGTCTTTCTTTCCTTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: ALRKGLRYLLRETSMMSAKMTNL*SFFPFF Trigger: AAAGAAAGGAAAGAAAGACCACAGGTTTGTCATCTT...TGCAGACATCATTGAGGTCTCCCTGAGTAGGTATCTGAGACCTTTTCGCAGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR-3UTR TCA 90 bp | ACTCTGAGACTAAGTATACCGCTCCTAACAATATTGTTTATGCTCTTCATTTACGGAAGCAGAAGGGAATaGGAGAGCACAGGGAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: TLRLSIPLLTILFMLFIYGSRRE*ESTGRS Trigger: ACTTCTCCCTGTGCTCTCTCATTCCCTTCTGCTTCC...GTAAATGAAGAGCATAAACAATATTGTTAGGAGCGGTATACTTAGTCTCAGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR-3UTR CCA 90 bp | ACTCTGAGACTAAGTATACCGCTCCTAACAATATTGTTTATGCTCTTCATTTACGAAGGGAGGCGAGAATaGGAAGAGGAATGCAGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: TLRLSIPLLTILFMLFIYEGRRE*EEECSQ Trigger: TTGGCTGCATTCCTCTTCCCATTCTCGCCTCCCTTC...GTAAATGAAGAGCATAAACAATATTGTTAGGAGCGGTATACTTAGTCTCAGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| 3UTR-3UTR TCA 90 bp | ACTCTGAGACTAAGTATACCGCTCCTAACAATATTGTTTATGCTCTTCATTTACAAGGATCTGAAGAGGTaGTCTGTCCCAGGGTTCACA | + |
|
Preference number: 2 (lower is better) Translates to: TLRLSIPLLTILFMLFIYKDLKR*SVPGFT Trigger: TGTGAACCCTGGGACAGATCACCTCTTCAGATCCTT...GTAAATGAAGAGCATAAACAATATTGTTAGGAGCGGTATACTTAGTCTCAGAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| 3UTR GCA 72 bp | GCCAGCGTCCCCCTGTCTCCCATCCCCACCGACTCCTaGAGGAATGTTCACCATCTTGCTCCTCACCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: ASVPLSPIPTDS*RNVHHLAPHLS Trigger: ACTGAGGTGAGGAGCAAGATGGTGAACATTCCTGCAGGAGTCGGTGGGGATGGGAGACAGGGGGACGCTGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| 3UTR CCA 72 bp | AGCCCAGCTCCCCTCTGGTTCCTGACTGGCCTTGGCTaGGAGACAGACCTAATCTCTCCGCCTGGCTTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: SPAPLWFLTGLG*ETDLISPPGFL Trigger: AAGGAAGCCAGGCGGAGAGATTAGGTCTGTCTCCCAGCCAAGGCCAGTCAGGAACCAGAGGGGAGCTGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| 3UTR CCA 72 bp | TGGCCTTGGCTGGGAGACAGACCTAATCTCTCCGCCTaGCTTCCTTTTCTGGCCCCAGGCTCTTGTACTCAC | + |
|
Preference number: 3 (lower is better) Translates to: WPWLGDRPNLSA*LPFLAPGSCTH Trigger: GTGAGTACAAGAGCCTGGGGCCAGAAAAGGAAGCCAGGCGGAGAGATTAGGTCTGTCTCCCAGCCAAGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| 3UTR CCA 72 bp | TGCCTGTCATGGACCCTTAGCCACTCTTCCCTGTCTTaGACAAACCCTTATGGCTCCCGGTGGGCCTGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: CLSWTLSHSSLS*TNPYGSRWAWL Trigger: TAGCCAGGCCCACCGGGAGCCATAAGGGTTTGTCCAAGACAGGGAAGAGTGGCTAAGGGTCCATGACAGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| 3UTR TCA 72 bp | AGACTCCGAGGGAGCAGCCGTCACCCTGACAACCTCTaGGACAAGCACCGTCACCATGACTACAGTGAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: RLRGSSRHPDNL*DKHRHHDYSES Trigger: ACTCTCACTGTAGTCATGGTGACGGTGCTTGTCTCAGAGGTTGTCAGGGTGACGGCTGCTCCCTCGGAGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| 3UTR CCA 72 bp | AGCCCCGGGAGCTTAGGTGAGCTGGTGTTGGAATCCTaGCCTATGTGGGTTGGTGACTATGTACAGAGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: SPGSLGELVLES*PMWVGDYVQRP Trigger: AGGCCTCTGTACATAGTCACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACCTAAGCTCCCGGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
||
| 3UTR-3UTR CAA 90 bp | GACAGTTCCTTAGCAAACCTGAGCCCCGGGAGCTTAGGTGAGCTGGTGTTGGAACCTGGCCTATGTGGGTaGGTGACTATGTACAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: DSSLANLSPGSLGELVLEPGLCG*VTMYRG Trigger: GCCTCTGTACATAGTCACCAACCCACATAGGCCAGG...TTCCAACACCAGCTCACCTAAGCTCCCGGGGCTCAGGTTTGCTAAGGAACTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
||
| 3UTR TCA 72 bp | GGAAGAGGAATGCAGCCAAGGGTCACTGACACTTGGTaGCCTGAGAGGCTTTCCTCATGGGTTAGCCGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: GRGMQPRVTDTW*PERLSSWVSRD Trigger: ATCCCGGCTAACCCATGAGGAAAGCCTCTCAGGTCACCAAGTGTCAGTGACCCTTGGCTGCATTCCTCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| 3UTR GCA 72 bp | CTTGCTCCTCACCTCAGTGCACAGTGTCTCACCTTCTaGCCACCACATGCATGCTCTGCGAAAAGGTCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LAPHLSAQCLTF*PPHACSAKRSQ Trigger: CTGAGACCTTTTCGCAGAGCATGCATGTGGTGGGCAGAAGGTGAGACACTGTGCACTGAGGTGAGGAGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| 3UTR-3UTR CAA 90 bp | TGGACCCTTAGCCACTCTTCCCTGTCTTGGACAAACCCTTATGGCTCCCGGTGGCGAGCTATCATGTGGTaGCTGGGAATTGAACTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: WTLSHSSLSWTNPYGSRWRAIMW*LGIELR Trigger: CCTGAGTTCAATTCCCAGCAACCACATGATAGCTCG...CCACCGGGAGCCATAAGGGTTTGTCCAAGACAGGGAAGAGTGGCTAAGGGTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| 3UTR GCA 72 bp | TTATTTACCCAAGGCTGCCATCTTAGTTCCCTCAGGTaGCTCCTTCTGACTCCCCAGTCCCTCCCTTCACCA | + |
|
Preference number: 3 (lower is better) Translates to: LFTQGCHLSSLR*LLLTPQSLPSP Trigger: TGGTGAAGGGAGGGACTGGGGAGTCAGAAGGAGGCACCTGAGGGAACTAAGATGGCAGCCTTGGGTAAATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| 3UTR GCA 72 bp | CTGCAGGAATGTTCACCATCTTGCTCCTCACCTCAGTaGACAGTGTCTCACCTTCTGCCCACCACATGCATG | + |
|
Preference number: 3 (lower is better) Translates to: LQECSPSCSSPQ*TVSHLLPTTCM Trigger: CATGCATGTGGTGGGCAGAAGGTGAGACACTGTGCACTGAGGTGAGGAGCAAGATGGTGAACATTCCTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| 3UTR CCA 72 bp | AGGCAGGACACAGAGCCAGAGCCTACCCCACCTACCTaGAGGCTGAAGATGACAAACCTGTGGTCTTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: RQDTEPEPTPPT*RLKMTNLWSFF Trigger: AAAGAAAGACCACAGGTTTGTCATCTTCAGCCTCCAGGTAGGTGGGGTAGGCTCTGGCTCTGTGTCCTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| 3UTR TCA 72 bp | GAGCCTTTTCCAGGACTAACTAGGCAGTACCGGAAATaGCGTGGGTTCAGCAGATGTGCAGGAAGCAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: EPFPGLTRQYRK*RGFSRCAGSRR Trigger: CCTTCTGCTTCCTGCACATCTGCTGAACCCACGTCATTTCCGGTACTGCCTAGTTAGTCCTGGAAAAGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| 3UTR GCA 72 bp | CCTCAGTGCACAGTGTCTCACCTTCTGCCCACCACATaGATGCTCTGCGAAAAGGTCTCAGATACCTACTCA | + |
|
Preference number: 3 (lower is better) Translates to: PQCTVSHLLPTT*MLCEKVSDTYS Trigger: TGAGTAGGTATCTGAGACCTTTTCGCAGAGCATGCATGTGGTGGGCAGAAGGTGAGACACTGTGCACTGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| 3UTR CCA 72 bp | TTCCCTAAAGATGGCGCTGGGTACAGTATACGCTATTaGTCAGCACTGACTTGGCTGTTGTGGCCCCAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: FPKDGAGYSIRY*SALTWLLWPQN Trigger: GTTCTGGGGCCACAACAGCCAAGTCAGTGCTGACCAATAGCGTATACTGTACCCAGCGCCATCTTTAGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| 3UTR-3UTR CAA 90 bp | TGGACCCTTAGCCACTCTTCCCTGTCTTGGACAAACCCTTATGGCTCCCGGTGGCTGTTTCTCAGTTGCTaGGCTCATTCATCTAGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: WTLSHSSLSWTNPYGSRWLFLSC*AHSSRY Trigger: GTACCTAGATGAATGAGCCAAGCAACTGAGAAACAG...CCACCGGGAGCCATAAGGGTTTGTCCAAGACAGGGAAGAGTGGCTAAGGGTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| 3UTR-3UTR CAA 90 bp | TGGACCCTTAGCCACTCTTCCCTGTCTTGGACAAACCCTTATGGCTCCCGGTGGCACAGAAGGAGAATTTaGTGTTTTCAAGGTGTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: WTLSHSSLSWTNPYGSRWHRRRI*CFQGVR Trigger: CCTCACACCTTGAAAACACAAAATTCTCCTTCTGTG...CCACCGGGAGCCATAAGGGTTTGTCCAAGACAGGGAAGAGTGGCTAAGGGTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| 3UTR-3UTR CAA 90 bp | GCTCTGCGAAAAGGTCTCAGATACCTACTCAGGGAGACCTCAATGATGTCTGCATCTGGCCCCAGGCTCTaGTACTCACAGAAGGAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: ALRKGLRYLLRETSMMSASGPRL*YSQKEN Trigger: ATTCTCCTTCTGTGAGTACAAGAGCCTGGGGCCAGA...TGCAGACATCATTGAGGTCTCCCTGAGTAGGTATCTGAGACCTTTTCGCAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| 3UTR TCA 72 bp | GGAGAAGTGGCAGCTAATGGGGCTCTCAGAACAGTGTaGGGCCACAGAGAACTTACTGTTCTAAAAAGGCGG | + |
|
Preference number: 3 (lower is better) Translates to: GEVAANGALRTV*GHRELTVLKRR Trigger: CCGCCTTTTTAGAACAGTAAGTTCTCTGTGGCCTCACACTGTTCTGAGAGCCCCATTAGCTGCCACTTCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| 3UTR GCA 72 bp | GCTGGAGCAGTCTCCTCAAGTTTATTTACCCAAGGCTaGCATCTTAGTTCCCTCAGGTGCCTCCTTCTGACT | + |
|
Preference number: 3 (lower is better) Translates to: AGAVSSSLFTQG*HLSSLRCLLLT Trigger: AGTCAGAAGGAGGCACCTGAGGGAACTAAGATGGCAGCCTTGGGTAAATAAACTTGAGGAGACTGCTCCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| 3UTR CCA 72 bp | GAGACAGACCTAATCTCTCCGCCTGGCTTCCTTTTCTaGCCCCAGGCTCTTGTACTCACAGAAGGAGAATTT | + |
|
Preference number: 3 (lower is better) Translates to: ETDLISPPGFLF*PQALVLTEGEF Trigger: AAATTCTCCTTCTGTGAGTACAAGAGCCTGGGGCCAGAAAAGGAAGCCAGGCGGAGAGATTAGGTCTGTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| 3UTR CCA 72 bp | AGAGTTGTAATAAAGGGGCCGGTACACGTCTTGGACTaGGGCAGGCTTTTCATGGTTAGGCTGAGACTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: RVVIKGPVHVLD*GRLFMVRLRLE Trigger: CTCAAGTCTCAGCCTAACCATGAAAAGCCTGCCCCAGTCCAAGACGTGTACCGGCCCCTTTATTACAACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| 3UTR-3UTR CAA 90 bp | GCCTTATGGACAGAGAGGACCATTACCCAAGGATCAATGGGTCACTGGGTGGCATGGGTGTCGATCTGTTaGAATAATACAGGTGAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: ALWTERTITQGSMGHWVAWVSIC*NNTGEG Trigger: ACCCTCACCTGTATTATTCAAACAGATCGACACCCA...TGCCACCCAGTGACCCATTGATCCTTGGGTAATGGTCCTCTCTGTCCATAAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| 3UTR GCA 72 bp | GTGTCTGACAGTGTCATGAGCTACGCTGATTCTGCATaGTCTGGAAAGCCAGGGATGTCCTGGAAACTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: VSDSVMSYADSA*SGKPGMSWKLF Trigger: GAAAAGTTTCCAGGACATCCCTGGCTTTCCAGAGCATGCAGAATCAGCGTAGCTCATGACACTGTCAGACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| 3UTR CCA 72 bp | GCTGGGTACAGTATACGCTATTGGTCAGCACTGACTTaGCTGTTGTGGCCCCAGAACAAAACCTCTATTCCA | + |
|
Preference number: 3 (lower is better) Translates to: AGYSIRYWSALT*LLWPQNKTSIP Trigger: TGGAATAGAGGTTTTGTTCTGGGGCCACAACAGCCAAGTCAGTGCTGACCAATAGCGTATACTGTACCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| 3UTR-3UTR CAA 90 bp | ACTCTGAGACTAAGTATACCGCTCCTAACAATATTGTTTATGCTCTTCATTTACGTGAGACAGTTGCCCTaGGGAGGCCCGTGGCCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: TLRLSIPLLTILFMLFIYVRQLP*GGPWPW Trigger: CCAGGGCCACGGGCCTCCCAAGGGCAACTGTCTCAC...GTAAATGAAGAGCATAAACAATATTGTTAGGAGCGGTATACTTAGTCTCAGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| 3UTR GCA 72 bp | TCTCAGATACCTACTCAGGGAGACCTCAATGATGTCTaGATTTTACCTCATTCCCTAAAGATGGCGCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: SQIPTQGDLNDV*ILPHSLKMALG Trigger: ACCCAGCGCCATCTTTAGGGAATGAGGTAAAATGCAGACATCATTGAGGTCTCCCTGAGTAGGTATCTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR TCA 72 bp | GAATTTCTCTCATGTCTAAAGTGTCTGACAGTGTCATaGGCTACGCTGATTCTGCATGCTCTGGAAAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: EFLSCLKCLTVS*ATLILHALESQ Trigger: CTGGCTTTCCAGAGCATGCAGAATCAGCGTAGCTCATGACACTGTCAGACACTTTAGACATGAGAGAAATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| 3UTR GCA 72 bp | ACCTTCATATTCCCACCTCAAGCCTTCCAGTTTCCTTaGTGTTTCTCAGTTGCTTGGCTCATTCATCTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: TFIFPPQAFQFP*CFSVAWLIHLG Trigger: ACCTAGATGAATGAGCCAAGCAACTGAGAAACAGCAAGGAAACTGGAAGGCTTGAGGTGGGAATATGAAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| 3UTR TCA 72 bp | GGGAATAAGGAAAGAAAACTCTATTCCATAGGAACCTaGAGCCAGCTTCCCGTCTCAAGGAAAGTGAACACT | + |
|
Preference number: 3 (lower is better) Translates to: GNKERKLYSIGT*SQLPVSRKVNT Trigger: AGTGTTCACTTTCCTTGAGACGGGAAGCTGGCTTCAGGTTCCTATGGAATAGAGTTTTCTTTCCTTATTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| 3UTR CCA 72 bp | AGGATATATAAATTTAACTTTCTCCCCTTTAGAGCATaGTCTGTGGCAGGATTACTTCCCTGCCGCTCGAGT | + |
|
Preference number: 3 (lower is better) Translates to: RIYKFNFLPFRA*SVAGLLPCRSS Trigger: ACTCGAGCGGCAGGGAAGTAATCCTGCCACAGACCATGCTCTAAAGGGGAGAAAGTTAAATTTATATATCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| 3UTR CCA 72 bp | ACCCCACCTACCTGGAGGCTGAAGATGACAAACCTGTaGTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: TPPTWRLKMTNL*SFFPFFLSFFL Trigger: AAGAAAGAAAGAAAGAAAGAAAGGAAAGAAAGACCACAGGTTTGTCATCTTCAGCCTCCAGGTAGGTGGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| 3UTR CCA 72 bp | CAAGCCTTCCAGTTTCCTTGCTGTTTCTCAGTTGCTTaGCTCATTCATCTAGGTACATCTATGCTATGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: QAFQFPCCFSVA*LIHLGTSMLWF Trigger: AAACCATAGCATAGATGTACCTAGATGAATGAGCCAAGCAACTGAGAAACAGCAAGGAAACTGGAAGGCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| 3UTR TCA 72 bp | GGTGTCCCATTTAGACTTCCAACTGAAGGCCACACATaGCTGAAAAAGTTCAAGGTATTTATGGGTAAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GVPFRLPTEGHT*LKKFKVFMGKA Trigger: TGCTTTACCCATAAATACCTTGAACTTTTTCAGTCATGTGTGGCCTTCAGTTGGAAGTCTAAATGGGACACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| 3UTR TCA 72 bp | TCCCATTTAGACTTCCAACTGAAGGCCACACATGACTaGAAAAGTTCAAGGTATTTATGGGTAAAGCAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: SHLDFQLKATHD*KSSRYLWVKQN Trigger: GTTTTGCTTTACCCATAAATACCTTGAACTTTTTCAGTCATGTGTGGCCTTCAGTTGGAAGTCTAAATGGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR GCA 90 bp | TGGGAAGAGGAATGCAGCCAAGGGTCACTGACACTTGGTGACCTGAGAGGCTTTCCGCGCTTCGGCACTTaGCCACGGCATCCGGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: WEEECSQGSLTLGDLRGFPRFGT*PRHPAR Trigger: CCGTGCCGGATGCCGTGGGCAAGTGCCGAAGCGCGG...AAAGCCTCTCAGGTCACCAAGTGTCAGTGACCCTTGGCTGCATTCCTCTTCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR CCA 90 bp | AGCCCCGGGAGCTTAGGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTGGCACACAGTCACGGTaGCCAACAGCCCTTCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SPGSLGELVLESWPMWVGGTQSR*PTALRA Trigger: TGCCCGAAGGGCTGTTGGCCACCGTGACTGTGTGCC...ACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACCTAAGCTCCCGGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
||
| CDS-3UTR GCA 90 bp | TTAGGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTGACTATGTACAGCCGCGCTTCGGCACTTaGCCACGGCATCCGGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: LGELVLESWPMWVGDYVQPRFGT*PRHPAR Trigger: CCGTGCCGGATGCCGTGGGCAAGTGCCGAAGCGCGG...CTGTACATAGTCACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACCTAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
||
| CDS-3UTR GCA 90 bp | TGGACCCTTAGCCACTCTTCCCTGTCTTGGACAAACCCTTATGGCTCCCGGTGGCCCGTCACCAGTCACTaGCACAATGGCTCCCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: WTLSHSSLSWTNPYGSRWPVTSH*HNGSLP Trigger: AGGCAGGGAGCCATTGTGGCAGTGACTGGTGACGGG...CCACCGGGAGCCATAAGGGTTTGTCCAAGACAGGGAAGAGTGGCTAAGGGTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR GCA 90 bp | GAAGGATCTGAAGAGGTGATCTGTCCCAGGGTTCACAGCGGGACCTGTGGAGCACTGTCCCCAGGTCGATaGAGAGGATGGTCACAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: EGSEEVICPRVHSGTCGALSPGR*RGWSQC Trigger: GCACTGTGACCATCCTCTGCATCGACCTGGGGACAG...TGCTCCACAGGTCCCGCTGTGAACCCTGGGACAGATCACCTCTTCAGATCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR CCA 90 bp | AGCCCCGGGAGCTTAGGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTCAATCACAATGCCCCTaGCAGTGCCTTCCACGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SPGSLGELVLESWPMWVGQSQCP*QCLPRS Trigger: ACTGCGTGGAAGGCACTGCCAGGGGCATTGTGATTG...ACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACCTAAGCTCCCGGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
||
| CDS-3UTR TCA 90 bp | GACAGTTCCTTAGCAAACCTGAGCCCCGGGAGCTTAGGTGAGCTGGTGTTGGAAGAAGGCAGGTTCAGCTaGCAGAAGCCCAGCACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: DSSLANLSPGSLGELVLEEGRFS*QKPSTR Trigger: ACGAGTGCTGGGCTTCTGTCAGCTGAACCTGCCTTC...TTCCAACACCAGCTCACCTAAGCTCCCGGGGCTCAGGTTTGCTAAGGAACTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
||
| CDS-3UTR TCA 90 bp | GACAGTTCCTTAGCAAACCTGAGCCCCGGGAGCTTAGGTGAGCTGGTGTTGGAACATGTCCTTCAGGTCTaGGCCGTGCACTACACACGC | + |
|
Preference number: 4 (lower is better) Translates to: DSSLANLSPGSLGELVLEHVLQV*AVHYTR Trigger: GCGTGTGTAGTGCACGGCTCAGACCTGAAGGACATG...TTCCAACACCAGCTCACCTAAGCTCCCGGGGCTCAGGTTTGCTAAGGAACTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
||
| CDS-3UTR GCA 90 bp | TGGAATCCTGGCCTATGTGGGTTGGTGACTATGTACAGAGGCCTCTGCCTGGTAAGCATCGGTCCAGGATaGGCTCTGGGGCGCCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: WNPGLCGLVTMYRGLCLVSIGPG*ALGRLS Trigger: TGAAAGGCGCCCCAGAGCGCATCCTGGACCGATGCT...TACCAGGCAGAGGCCTCTGTACATAGTCACCAACCCACATAGGCCAGGATTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
||
| CDS-3UTR GCA 90 bp | GAAGGATCTGAAGAGGTGATCTGTCCCAGGGTTCACAGCGGGACCTGTGGAGCAAGAGGATGGTCACAGTaGCCAGTGGAAGGGGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: EGSEEVICPRVHSGTCGARGWSQ*PVEGGC Trigger: ACATCCCCCTTCCACTGGGCACTGTGACCATCCTCT...TGCTCCACAGGTCCCGCTGTGAACCCTGGGACAGATCACCTCTTCAGATCCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR GCA 90 bp | GACAGTTCCTTAGCAAACCTGAGCCCCGGGAGCTTAGGTGAGCTGGTGTTGGAACTGTCCCCAGGTCGATaGAGAGGATGGTCACAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: DSSLANLSPGSLGELVLELSPGR*RGWSQC Trigger: GCACTGTGACCATCCTCTGCATCGACCTGGGGACAG...TTCCAACACCAGCTCACCTAAGCTCCCGGGGCTCAGGTTTGCTAAGGAACTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
||
| CDS-3UTR GCA 90 bp | GCCTTATGGACAGAGAGGACCATTACCCAAGGATCAATGGGTCACTGGGTGGCAGGAGGGCAACCCCCATaGCCGGGCAGTAAGACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ALWTERTITQGSMGHWVAGGQPP*PGSKTE Trigger: TTCTGTCTTACTGCCCGGGCATGGGGGTTGCCCTCC...TGCCACCCAGTGACCCATTGATCCTTGGGTAATGGTCCTCTCTGTCCATAAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR CCA 90 bp | CTTGGCTGGGAGACAGACCTAATCTCTCCGCCTGGCTTCCTTTTCTGGCCCCAGTCCAAGGACAGCTTGTaGTCATCCATGGCAACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LGWETDLISPPGFLFWPQSKDSL*SSMATS Trigger: GGAGGTTGCCATGGATGACCACAAGCTGTCCTTGGA...CTGGGGCCAGAAAAGGAAGCCAGGCGGAGAGATTAGGTCTGTCTCCCAGCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| CDS-3UTR CCA 90 bp | GGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTGACTATGTACAGAGGGGCCAGAGGCAAGAGTaGCTATGCGGCCCATCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GELVLESWPMWVGDYVQRGQRQE*LCGPSL Trigger: CAGTGATGGGCCGCATAGCCACTCTTGCCTCTGGCC...CCTCTGTACATAGTCACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
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| CDS-3UTR CCA 90 bp | AGCCCCGGGAGCTTAGGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTTTCATCACCAGCACATaGCTCTGGGGACTGTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPGSLGELVLESWPMWVGFITST*LWGLSS Trigger: GGAAGACAGTCCCCAGAGCCATGTGCTGGTGATGAA...ACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACCTAAGCTCCCGGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
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| CDS-3UTR CCA 90 bp | GACAGTTCCTTAGCAAACCTGAGCCCCGGGAGCTTAGGTGAGCTGGTGTTGGAATGCCCTGTACCAGGATaGTGGAGCATCGGTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DSSLANLSPGSLGELVLECPVPG*WSIGPG Trigger: TCCTGGACCGATGCTCCACCATCCTGGTACAGGGCA...TTCCAACACCAGCTCACCTAAGCTCCCGGGGCTCAGGTTTGCTAAGGAACTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
||
| CDS-3UTR TCA 90 bp | GCCTTATGGACAGAGAGGACCATTACCCAAGGATCAATGGGTCACTGGGTGGCAGAAGGCAGGTTCAGCTaGCAGAAGCCCAGCACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: ALWTERTITQGSMGHWVAEGRFS*QKPSTR Trigger: ACGAGTGCTGGGCTTCTGTCAGCTGAACCTGCCTTC...TGCCACCCAGTGACCCATTGATCCTTGGGTAATGGTCCTCTCTGTCCATAAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR CCA 90 bp | GCCTTATGGACAGAGAGGACCATTACCCAAGGATCAATGGGTCACTGGGTGGCACCCCATTTTCCGCAGTaGTGGCAGCAGGCGAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: ALWTERTITQGSMGHWVAPHFPQ*WQQAST Trigger: AGTACTCGCCTGCTGCCACCACTGCGGAAAATGGGG...TGCCACCCAGTGACCCATTGATCCTTGGGTAATGGTCCTCTCTGTCCATAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR CCA 90 bp | GGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTGACTATGTACAGAGGCCCCATTTTCCGCAGTaGTGGCAGCAGGCGAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: GELVLESWPMWVGDYVQRPHFPQ*WQQAST Trigger: AGTACTCGCCTGCTGCCACCACTGCGGAAAATGGGG...CCTCTGTACATAGTCACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
||
| CDS-3UTR CCA 90 bp | AGCCCCGGGAGCTTAGGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTGCTTGTGGTCATCCATaGCAACCTCCTTCTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SPGSLGELVLESWPMWVGACGHP*QPPSSA Trigger: AGCTGAAGAAGGAGGTTGCCATGGATGACCACAAGC...ACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACCTAAGCTCCCGGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
||
| CDS-3UTR CCA 90 bp | CTTGGCTGGGAGACAGACCTAATCTCTCCGCCTGGCTTCCTTTTCTGGCCCCAGAATGCTCGATCTCCATaGCTATGGGTGTCTGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGWETDLISPPGFLFWPQNARSP*LWVSVP Trigger: TGGGACAGACACCCATAGCCATGGAGATCGAGCATT...CTGGGGCCAGAAAAGGAAGCCAGGCGGAGAGATTAGGTCTGTCTCCCAGCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR CCA 90 bp | CTTGGCTGGGAGACAGACCTAATCTCTCCGCCTGGCTTCCTTTTCTGGCCCCAGACCCCTGTGATCAGCTaGATGAAATGCTCGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LGWETDLISPPGFLFWPQTPVIS*MKCSIS Trigger: GGAGATCGAGCATTTCATCCAGCTGATCACAGGGGT...CTGGGGCCAGAAAAGGAAGCCAGGCGGAGAGATTAGGTCTGTCTCCCAGCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR CCA 90 bp | GCCTTATGGACAGAGAGGACCATTACCCAAGGATCAATGGGTCACTGGGTGGCAACCAGCACATGGCTCTaGGGACTGTCTTCCCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: ALWTERTITQGSMGHWVATSTWL*GLSSLS Trigger: CGAGAGGGAAGACAGTCCCCAGAGCCATGTGCTGGT...TGCCACCCAGTGACCCATTGATCCTTGGGTAATGGTCCTCTCTGTCCATAAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR CCA 90 bp | AGCCCCGGGAGCTTAGGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTAAGACAATCTCCGTGTaGTCCCTGAGGATCTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: SPGSLGELVLESWPMWVGKTISV*SLRISS Trigger: GGATGAGATCCTCAGGGACCACACGGAGATTGTCTT...ACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACCTAAGCTCCCGGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
||
| 3UTR CAA 72 bp | GTAAAGCAAAACTCCACTGTGGTGAGACAGTTGCCCTaGGGAGGCCCGTGGCCCTGGCCTAATGCTTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VKQNSTVVRQLP*GGPWPWPNACL Trigger: AAGACAAGCATTAGGCCAGGGCCACGGGCCTCCCAAGGGCAACTGTCTCACCACAGTGGAGTTTTGCTTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| 3UTR CAA 72 bp | TTATGGGTAAAGCAAAACTCCACTGTGGTGAGACAGTaGCCCTTGGGAGGCCCGTGGCCCTGGCCTAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: LWVKQNSTVVRQ*PLGGPWPWPNA Trigger: AGCATTAGGCCAGGGCCACGGGCCTCCCAAGGGCAACTGTCTCACCACAGTGGAGTTTTGCTTTACCCATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| 3UTR CAA 72 bp | CCATCCCCACCGACTCCTGCAGGAATGTTCACCATCTaGCTCCTCACCTCAGTGCACAGTGTCTCACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PSPPTPAGMFTI*LLTSVHSVSPS Trigger: AGAAGGTGAGACACTGTGCACTGAGGTGAGGAGCAAGATGGTGAACATTCCTGCAGGAGTCGGTGGGGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| 3UTR CAA 72 bp | GCAAACCTGAGCCCCGGGAGCTTAGGTGAGCTGGTGTaGGAATCCTGGCCTATGTGGGTTGGTGACTATGTA | + |
|
Preference number: 4 (lower is better) Translates to: ANLSPGSLGELV*ESWPMWVGDYV Trigger: TACATAGTCACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACCTAAGCTCCCGGGGCTCAGGTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
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| CDS-3UTR TCA 90 bp | GGGAGCTTAGGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTGACTATTTTCTCCCTCTCGGATaGCCAGAGCTTGCTGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GSLGELVLESWPMWVGDYFLPLG*PELAEA Trigger: TGCCTCAGCAAGCTCTGGTCATCCGAGAGGGAGAAA...ATAGTCACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACCTAAGCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
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| CDS-3UTR TCA 90 bp | TGGGAAGAGGAATGCAGCCAAGGGTCACTGACACTTGGTGACCTGAGAGGCTTTTTAGCTGTGATGGGGTaGTCCCCGGTCACCATGATC | + |
|
Preference number: 4 (lower is better) Translates to: WEEECSQGSLTLGDLRGFLAVMG*SPVTMI Trigger: GATCATGGTGACCGGGGATCACCCCATCACAGCTAA...AAAGCCTCTCAGGTCACCAAGTGTCAGTGACCCTTGGCTGCATTCCTCTTCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR TCA 90 bp | GGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTGACTATGTACAGAGGTTAGCTGTGATGGGGTaGTCCCCGGTCACCATGATC | + |
|
Preference number: 4 (lower is better) Translates to: GELVLESWPMWVGDYVQRLAVMG*SPVTMI Trigger: GATCATGGTGACCGGGGATCACCCCATCACAGCTAA...CCTCTGTACATAGTCACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
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| CDS-3UTR GCA 90 bp | AGCTTAGGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTGACTATGTACCCGTCACCAGTCACTaGCACAATGGCTCCCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLGELVLESWPMWVGDYVPVTSH*HNGSLP Trigger: AGGCAGGGAGCCATTGTGGCAGTGACTGGTGACGGG...TACATAGTCACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACCTAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
||
| CDS-3UTR GCA 90 bp | GCCTTATGGACAGAGAGGACCATTACCCAAGGATCAATGGGTCACTGGGTGGCAATCATGTCAGCCGCCTaGTTAGAGACATCGGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ALWTERTITQGSMGHWVAIMSAA*LETSEP Trigger: CGGCTCCGATGTCTCTAAGCAGGCGGCTGACATGAT...TGCCACCCAGTGACCCATTGATCCTTGGGTAATGGTCCTCTCTGTCCATAAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR GCA 90 bp | TGGAATCCTGGCCTATGTGGGTTGGTGACTATGTACAGAGGCCTCTGCCTGGTAATCATGTCAGCCGCCTaGTTAGAGACATCGGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: WNPGLCGLVTMYRGLCLVIMSAA*LETSEP Trigger: CGGCTCCGATGTCTCTAAGCAGGCGGCTGACATGAT...TACCAGGCAGAGGCCTCTGTACATAGTCACCAACCCACATAGGCCAGGATTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
||
| CDS-3UTR GCA 90 bp | GGGAGCTTAGGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTGACTATAGAGGATGGTCACAGTaGCCAGTGGAAGGGGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: GSLGELVLESWPMWVGDYRGWSQ*PVEGGC Trigger: ACATCCCCCTTCCACTGGGCACTGTGACCATCCTCT...ATAGTCACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACCTAAGCTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
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| CDS-3UTR CCA 90 bp | GCTCTGCGAAAAGGTCTCAGATACCTACTCAGGGAGACCTCAATGATGTCTGCAGGCCAGAGGCAAGAGTaGCTATGCGGCCCATCACTG | + |
|
Preference number: 4 (lower is better) Translates to: ALRKGLRYLLRETSMMSAGQRQE*LCGPSL Trigger: CAGTGATGGGCCGCATAGCCACTCTTGCCTCTGGCC...TGCAGACATCATTGAGGTCTCCCTGAGTAGGTATCTGAGACCTTTTCGCAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| CDS-3UTR CCA 90 bp | GTCATGAGCTACGCTGATTCTGCATGCTCTGGAAAGCCAGGGATGTCCTGGAAAAAAGTGGCCCCAGACTaGTCCTCTGTGGTGTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VMSYADSACSGKPGMSWKKVAPD*SSVVSA Trigger: GGCTGACACCACAGAGGACCAGTCTGGGGCCACTTT...TTTCCAGGACATCCCTGGCTTTCCAGAGCATGCAGAATCAGCGTAGCTCATGAC 54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| CDS-3UTR CCA 90 bp | TGGAATCCTGGCCTATGTGGGTTGGTGACTATGTACAGAGGCCTCTGCCTGGTAGGTCACAGTGCCCAGTaGAAGGGGGATGTTGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: WNPGLCGLVTMYRGLCLVGHSAQ*KGDVGN Trigger: ATTGCCAACATCCCCCTTCCACTGGGCACTGTGACC...TACCAGGCAGAGGCCTCTGTACATAGTCACCAACCCACATAGGCCAGGATTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
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| CDS-3UTR CCA 90 bp | GGGAGCTTAGGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTGACTATACCAGCTTGTCTGTCTaGGAGTTTCGTGGCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GSLGELVLESWPMWVGDYTSLSV*EFRGCL Trigger: GAGGCAGCCACGAAACTCCCAGACAGACAAGCTGGT...ATAGTCACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACCTAAGCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
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| CDS-3UTR TCA 90 bp | GTCATGAGCTACGCTGATTCTGCATGCTCTGGAAAGCCAGGGATGTCCTGGAAAAGCTGTAGCCCAGGATaGGGGACAGAACGAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VMSYADSACSGKPGMSWKSCSPG*GTERRR Trigger: CCTTCTTCGTTCTGTCCCTCATCCTGGGCTACAGCT...TTTCCAGGACATCCCTGGCTTTCCAGAGCATGCAGAATCAGCGTAGCTCATGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| CDS-3UTR GCA 90 bp | GAAGGATCTGAAGAGGTGATCTGTCCCAGGGTTCACAGCGGGACCTGTGGAGCAGGATCTTGTTCTTCATaGCCTGCTGGAACACTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: EGSEEVICPRVHSGTCGAGSCSS*PAGTLS Trigger: ACTCAGTGTTCCAGCAGGGCATGAAGAACAAGATCC...TGCTCCACAGGTCCCGCTGTGAACCCTGGGACAGATCACCTCTTCAGATCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| CDS-3UTR CCA 90 bp | GTCATGAGCTACGCTGATTCTGCATGCTCTGGAAAGCCAGGGATGTCCTGGAAACAATCACAATGCCCCTaGCAGTGCCTTCCACGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VMSYADSACSGKPGMSWKQSQCP*QCLPRS Trigger: ACTGCGTGGAAGGCACTGCCAGGGGCATTGTGATTG...TTTCCAGGACATCCCTGGCTTTCCAGAGCATGCAGAATCAGCGTAGCTCATGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| CDS-3UTR CCA 90 bp | CCAGTACCACAGTCTGAGGGGAAGGCCAATGTTAAGTATAGAAATCAACCATGGGGCACACAGTCACGGTaGCCAACAGCCCTTCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PVPQSEGKANVKYRNQPWGTQSR*PTALRA Trigger: TGCCCGAAGGGCTGTTGGCCACCGTGACTGTGTGCC...CCATGGTTGATTTCTATACTTAACATTGGCCTTCCCCTCAGACTGTGGTACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| CDS-3UTR CCA 90 bp | AGCTTAGGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTGACTATGTAAAAGTGGCCCCAGACTaGTCCTCTGTGGTGTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLGELVLESWPMWVGDYVKVAPD*SSVVSA Trigger: GGCTGACACCACAGAGGACCAGTCTGGGGCCACTTT...TACATAGTCACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACCTAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
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| CDS-3UTR CCA 90 bp | GCCTTATGGACAGAGAGGACCATTACCCAAGGATCAATGGGTCACTGGGTGGCAACCGTTTGTCAAAAGTaGCCCCAGACTGGTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALWTERTITQGSMGHWVATVCQK*PQTGPL Trigger: CAGAGGACCAGTCTGGGGCCACTTTTGACAAACGGT...TGCCACCCAGTGACCCATTGATCCTTGGGTAATGGTCCTCTCTGTCCATAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| CDS-3UTR CCA 90 bp | TGGAATCCTGGCCTATGTGGGTTGGTGACTATGTACAGAGGCCTCTGCCTGGTAACCGTTTGTCAAAAGTaGCCCCAGACTGGTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WNPGLCGLVTMYRGLCLVTVCQK*PQTGPL Trigger: CAGAGGACCAGTCTGGGGCCACTTTTGACAAACGGT...TACCAGGCAGAGGCCTCTGTACATAGTCACCAACCCACATAGGCCAGGATTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
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| CDS-3UTR CCA 90 bp | TGGGAAGAGGAATGCAGCCAAGGGTCACTGACACTTGGTGACCTGAGAGGCTTTACAGGGCTGTCCATGTaGGGGACCGTTTGTCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: WEEECSQGSLTLGDLRGFTGLSM*GTVCQK Trigger: CTTTTGACAAACGGTCCCCCACATGGACAGCCCTGT...AAAGCCTCTCAGGTCACCAAGTGTCAGTGACCCTTGGCTGCATTCCTCTTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| CDS-3UTR CCA 90 bp | AGCTTAGGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTGACTATGTAACCAGCACATGGCTCTaGGGACTGTCTTCCCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SLGELVLESWPMWVGDYVTSTWL*GLSSLS Trigger: CGAGAGGGAAGACAGTCCCCAGAGCCATGTGCTGGT...TACATAGTCACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACCTAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
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| CDS-3UTR CCA 90 bp | GTCATGAGCTACGCTGATTCTGCATGCTCTGGAAAGCCAGGGATGTCCTGGAAAAAGCCACCCAGAGCCTaGATCATGCCAATCTGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: VMSYADSACSGKPGMSWKKPPRA*IMPICP Trigger: CGGACAGATTGGCATGATCCAGGCTCTGGGTGGCTT...TTTCCAGGACATCCCTGGCTTTCCAGAGCATGCAGAATCAGCGTAGCTCATGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR TCA 90 bp | TGGAATCCTGGCCTATGTGGGTTGGTGACTATGTACAGAGGCCTCTGCCTGGTAATGACCAGAGCTTGCTaGGGCACCATGTTCTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WNPGLCGLVTMYRGLCLVMTRAC*GTMFLK Trigger: CTTCAAGAACATGGTGCCTCAGCAAGCTCTGGTCAT...TACCAGGCAGAGGCCTCTGTACATAGTCACCAACCCACATAGGCCAGGATTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
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| CDS-3UTR TCA 90 bp | GCCTTATGGACAGAGAGGACCATTACCCAAGGATCAATGGGTCACTGGGTGGCACCACCTCCTCTGCATTaGTCTGCATCTTTTCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALWTERTITQGSMGHWVAPPPLH*SASFLP Trigger: AGGGAGAAAAGATGCAGATCAATGCAGAGGAGGTGG...TGCCACCCAGTGACCCATTGATCCTTGGGTAATGGTCCTCTCTGTCCATAAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR TCA 90 bp | TTAGGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTGACTATGTACAGAGCTGTAGCCCAGGATaGGGGACAGAACGAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LGELVLESWPMWVGDYVQSCSPG*GTERRR Trigger: CCTTCTTCGTTCTGTCCCTCATCCTGGGCTACAGCT...CTGTACATAGTCACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
||
| CDS-3UTR TCA 90 bp | AGCCCCGGGAGCTTAGGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTCATCTGTATCAAATTTaGAGCCCCGAGGAAACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SPGSLGELVLESWPMWVGHLYQI*SPEETF Trigger: GAAAGTTTCCTCGGGGCTTCAAATTTGATACAGATG...ACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACCTAAGCTCCCGGGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
||
| CDS-3UTR TCA 90 bp | TGGGAAGAGGAATGCAGCCAAGGGTCACTGACACTTGGTGACCTGAGAGGCTTTGACTCACAGGAATGTTaGGCCTGGCTGCAATGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: WEEECSQGSLTLGDLRGFDSQEC*AWLQCL Trigger: AAGACATTGCAGCCAGGCTCAACATTCCTGTGAGTC...AAAGCCTCTCAGGTCACCAAGTGTCAGTGACCCTTGGCTGCATTCCTCTTCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR GCA 90 bp | GTCATGAGCTACGCTGATTCTGCATGCTCTGGAAAGCCAGGGATGTCCTGGAAAAGTTTTTGCGAGCCATaGGCTTGGCTGTCAGCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VMSYADSACSGKPGMSWKSFCEP*AWLSAS Trigger: TGACGCTGACAGCCAAGCGCATGGCTCGCAAAAACT...TTTCCAGGACATCCCTGGCTTTCCAGAGCATGCAGAATCAGCGTAGCTCATGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR CCA 90 bp | TGGAATCCTGGCCTATGTGGGTTGGTGACTATGTACAGAGGCCTCTGCCTGGTAACCCCTGTGATCAGCTaGATGAAATGCTCGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WNPGLCGLVTMYRGLCLVTPVIS*MKCSIS Trigger: GGAGATCGAGCATTTCATCCAGCTGATCACAGGGGT...TACCAGGCAGAGGCCTCTGTACATAGTCACCAACCCACATAGGCCAGGATTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
||
| CDS-3UTR CCA 90 bp | GTCATGAGCTACGCTGATTCTGCATGCTCTGGAAAGCCAGGGATGTCCTGGAAATTCATCACCAGCACATaGCTCTGGGGACTGTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VMSYADSACSGKPGMSWKFITST*LWGLSS Trigger: GGAAGACAGTCCCCAGAGCCATGTGCTGGTGATGAA...TTTCCAGGACATCCCTGGCTTTCCAGAGCATGCAGAATCAGCGTAGCTCATGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR CCA 90 bp | CTGGAAAGCCAGGGATGTCCTGGAAACTTTTCTACACTGATTCCTGCCAATGGCACCAGCTTGTCTGTCTaGGAGTTTCGTGGCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LESQGCPGNFSTLIPANGTSLSV*EFRGCL Trigger: GAGGCAGCCACGAAACTCCCAGACAGACAAGCTGGT...GCCATTGGCAGGAATCAGTGTAGAAAAGTTTCCAGGACATCCCTGGCTTTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR CCA 90 bp | TTAGGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTGACTATGTACAGAAGCCACCCAGAGCCTaGATCATGCCAATCTGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LGELVLESWPMWVGDYVQKPPRA*IMPICP Trigger: CGGACAGATTGGCATGATCCAGGCTCTGGGTGGCTT...CTGTACATAGTCACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
||
| CDS-3UTR TCA 90 bp | AGCTTAGGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTGACTATGTACCTCATCTTCCTCACTaGGCCACAGGACAGCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SLGELVLESWPMWVGDYVPHLPH*ATGQLN Trigger: ATTGAGCTGTCCTGTGGCTCAGTGAGGAAGATGAGG...TACATAGTCACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACCTAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
||
| CDS-3UTR TCA 90 bp | GAAGGATCTGAAGAGGTGATCTGTCCCAGGGTTCACAGCGGGACCTGTGGAGCACATCTGTATCAAATTTaGAGCCCCGAGGAAACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EGSEEVICPRVHSGTCGAHLYQI*SPEETF Trigger: GAAAGTTTCCTCGGGGCTTCAAATTTGATACAGATG...TGCTCCACAGGTCCCGCTGTGAACCCTGGGACAGATCACCTCTTCAGATCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR TCA 90 bp | CCAGTACCACAGTCTGAGGGGAAGGCCAATGTTAAGTATAGAAATCAACCATGGCATGTCCTTCAGGTCTaGGCCGTGCACTACACACGC | + |
|
Preference number: 4 (lower is better) Translates to: PVPQSEGKANVKYRNQPWHVLQV*AVHYTR Trigger: GCGTGTGTAGTGCACGGCTCAGACCTGAAGGACATG...CCATGGTTGATTTCTATACTTAACATTGGCCTTCCCCTCAGACTGTGGTACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR GCA 90 bp | GGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTGACTATGTACAGAGGTCCTCTGCATTGATCTaGATCTTTTCTCCCTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GELVLESWPMWVGDYVQRSSALI*IFSPSR Trigger: CCGAGAGGGAGAAAAGATGCAGATCAATGCAGAGGA...CCTCTGTACATAGTCACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
||
| CDS-3UTR GCA 90 bp | GCCTTATGGACAGAGAGGACCATTACCCAAGGATCAATGGGTCACTGGGTGGCACACCACCACCTCCTCTaGATTGATCTGCATCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALWTERTITQGSMGHWVAHHHLL*IDLHLF Trigger: GAAAAGATGCAGATCAATGCAGAGGAGGTGGTGGTG...TGCCACCCAGTGACCCATTGATCCTTGGGTAATGGTCCTCTCTGTCCATAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR GCA 90 bp | GGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTGACTATGTACAGAGGCACCACCACCTCCTCTaGATTGATCTGCATCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GELVLESWPMWVGDYVQRHHHLL*IDLHLF Trigger: GAAAAGATGCAGATCAATGCAGAGGAGGTGGTGGTG...CCTCTGTACATAGTCACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
||
| CDS-3UTR GCA 90 bp | AGCTTAGGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTGACTATGTAAGTTTTTGCGAGCCATaGGCTTGGCTGTCAGCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLGELVLESWPMWVGDYVSFCEP*AWLSAS Trigger: TGACGCTGACAGCCAAGCGCATGGCTCGCAAAAACT...TACATAGTCACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACCTAAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
||
| CDS-3UTR GCA 90 bp | TTAGGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTGACTATGTACAGCCAGAGCCTGGATCATaGCAATCTGTCCGTAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGELVLESWPMWVGDYVQPEPGS*QSVRKP Trigger: TGGCTTACGGACAGATTGGCATGATCCAGGCTCTGG...CTGTACATAGTCACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
||
| CDS-3UTR GCA 90 bp | TGGGAAGAGGAATGCAGCCAAGGGTCACTGACACTTGGTGACCTGAGAGGCTTTTTGTTCTTCATGCCCTaGTGGAACACTGAGTTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: WEEECSQGSLTLGDLRGFLFFMP*WNTELR Trigger: TCGCAACTCAGTGTTCCAGCAGGGCATGAAGAACAA...AAAGCCTCTCAGGTCACCAAGTGTCAGTGACCCTTGGCTGCATTCCTCTTCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR CCA 90 bp | GTCATGAGCTACGCTGATTCTGCATGCTCTGGAAAGCCAGGGATGTCCTGGAAAGCTTGTGGTCATCCATaGCAACCTCCTTCTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VMSYADSACSGKPGMSWKACGHP*QPPSSA Trigger: AGCTGAAGAAGGAGGTTGCCATGGATGACCACAAGC...TTTCCAGGACATCCCTGGCTTTCCAGAGCATGCAGAATCAGCGTAGCTCATGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR CCA 90 bp | AGCTTAGGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTGACTATGTAACAGGGCTGTCCATGTaGGGGACCGTTTGTCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLGELVLESWPMWVGDYVTGLSM*GTVCQK Trigger: CTTTTGACAAACGGTCCCCCACATGGACAGCCCTGT...TACATAGTCACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACCTAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
||
| 3UTR CAA 72 bp | CGCTGGGTACAGTATACGCTATTGGTCAGCACTGACTaGGCTGTTGTGGCCCCAGAACAAAACCTCTATTCC | + |
|
Preference number: 4 (lower is better) Translates to: RWVQYTLLVSTD*AVVAPEQNLYS Trigger: GGAATAGAGGTTTTGTTCTGGGGCCACAACAGCCAAGTCAGTGCTGACCAATAGCGTATACTGTACCCAGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR TCA 90 bp | AGCTTAGGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTGACTATGTAGACTCACAGGAATGTTaGGCCTGGCTGCAATGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLGELVLESWPMWVGDYVDSQEC*AWLQCL Trigger: AAGACATTGCAGCCAGGCTCAACATTCCTGTGAGTC...TACATAGTCACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACCTAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
||
| CDS-3UTR GCA 90 bp | GGGAGCTTAGGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTGACTATATCAGCTGGATGAAATaGTCGATCTCCATGGCTATG | + |
|
Preference number: 4 (lower is better) Translates to: GSLGELVLESWPMWVGDYISWMK*SISMAM Trigger: CATAGCCATGGAGATCGAGCATTTCATCCAGCTGAT...ATAGTCACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACCTAAGCTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
||
| CDS-3UTR GCA 90 bp | AGCTTAGGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTGACTATGTAGTTGAAGGGGATTTCTaGCACCTTAGGGTTCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLGELVLESWPMWVGDYVVEGDF*HLRVPV Trigger: GACAGGAACCCTAAGGTGGCAGAAATCCCCTTCAAC...TACATAGTCACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACCTAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
||
| CDS-3UTR CCA 90 bp | TTAGGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTGACTATGTACAGAATGCTCGATCTCCATaGCTATGGGTGTCTGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGELVLESWPMWVGDYVQNARSP*LWVSVP Trigger: TGGGACAGACACCCATAGCCATGGAGATCGAGCATT...CTGTACATAGTCACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
||
| CDS-3UTR CCA 90 bp | TGGGAAGAGGAATGCAGCCAAGGGTCACTGACACTTGGTGACCTGAGAGGCTTTAACAGAGCTTCTCTGTaGGAAAGTTCAGCTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: WEEECSQGSLTLGDLRGFNRASL*ESSAHL Trigger: CAGATGAGCTGAACTTTCCCACAGAGAAGCTCTGTT...AAAGCCTCTCAGGTCACCAAGTGTCAGTGACCCTTGGCTGCATTCCTCTTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR CCA 90 bp | GGGAGCTTAGGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTGACTATAACAGAGCTTCTCTGTaGGAAAGTTCAGCTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSLGELVLESWPMWVGDYNRASL*ESSAHL Trigger: CAGATGAGCTGAACTTTCCCACAGAGAAGCTCTGTT...ATAGTCACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACCTAAGCTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
||
| CDS-3UTR CCA 90 bp | TTAGGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTGACTATGTACAGTGTCTGGGAGTTTCGTaGCTGCCTCTTCATGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: LGELVLESWPMWVGDYVQCLGVS*LPLHDV Trigger: GACATCATGAAGAGGCAGCCACGAAACTCCCAGACA...CTGTACATAGTCACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
||
| CDS-3UTR TCA 90 bp | CTGGAAAGCCAGGGATGTCCTGGAAACTTTTCTACACTGATTCCTGCCAATGGCATTTGTTGGTGGAGTTaGAGGGGATTTCTGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: LESQGCPGNFSTLIPANGICWWS*RGFLPP Trigger: AGGTGGCAGAAATCCCCTTCAACTCCACCAACAAAT...GCCATTGGCAGGAATCAGTGTAGAAAAGTTTCCAGGACATCCCTGGCTTTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR TCA 90 bp | TTAGGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTGACTATGTACAGATTTGTTGGTGGAGTTaGAGGGGATTTCTGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: LGELVLESWPMWVGDYVQICWWS*RGFLPP Trigger: AGGTGGCAGAAATCCCCTTCAACTCCACCAACAAAT...CTGTACATAGTCACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
||
| CDS-3UTR TCA 90 bp | CTGGAAAGCCAGGGATGTCCTGGAAACTTTTCTACACTGATTCCTGCCAATGGCTCTCTGGGATTGACTTaGCTCACAGGAATGTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LESQGCPGNFSTLIPANGSLGLT*LTGMLS Trigger: GCTCAACATTCCTGTGAGTCAAGTCAATCCCAGAGA...GCCATTGGCAGGAATCAGTGTAGAAAAGTTTCCAGGACATCCCTGGCTTTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR TCA 90 bp | AGCTTAGGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTGACTATGTATCTCTGGGATTGACTTaGCTCACAGGAATGTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLGELVLESWPMWVGDYVSLGLT*LTGMLS Trigger: GCTCAACATTCCTGTGAGTCAAGTCAATCCCAGAGA...TACATAGTCACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACCTAAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
||
| CDS-3UTR GCA 90 bp | GCTCTGCGAAAAGGTCTCAGATACCTACTCAGGGAGACCTCAATGATGTCTGCATCCTCTGCATTGATCTaGATCTTTTCTCCCTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: ALRKGLRYLLRETSMMSASSALI*IFSPSR Trigger: CCGAGAGGGAGAAAAGATGCAGATCAATGCAGAGGA...TGCAGACATCATTGAGGTCTCCCTGAGTAGGTATCTGAGACCTTTTCGCAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR CCA 90 bp | GTCATGAGCTACGCTGATTCTGCATGCTCTGGAAAGCCAGGGATGTCCTGGAAATTAGACAGATCCACTTaGTATTTTCGGCCCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VMSYADSACSGKPGMSWKLDRST*YFRPSS Trigger: TGAGCTGGGCCGAAAATACCAAGTGGATCTGTCTAA...TTTCCAGGACATCCCTGGCTTTCCAGAGCATGCAGAATCAGCGTAGCTCATGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR GCA 90 bp | CCAGTACCACAGTCTGAGGGGAAGGCCAATGTTAAGTATAGAAATCAACCATGGGTTGAAGGGGATTTCTaGCACCTTAGGGTTCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PVPQSEGKANVKYRNQPWVEGDF*HLRVPV Trigger: GACAGGAACCCTAAGGTGGCAGAAATCCCCTTCAAC...CCATGGTTGATTTCTATACTTAACATTGGCCTTCCCCTCAGACTGTGGTACTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR GCA 90 bp | TCAACTGATGAGCCATCTTTTCAGCTCCCTAATTCTTGTCTTGACCTTCATATTAGCATCGGTCCAGGATaGGCTCTGGGGCGCCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: STDEPSFQLPNSCLDLHISIGPG*ALGRLS Trigger: TGAAAGGCGCCCCAGAGCGCATCCTGGACCGATGCT...AATATGAAGGTCAAGACAAGAATTAGGGAGCTGAAAAGATGGCTCATCAGTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR CCA 90 bp | AGCTTAGGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTGACTATGTATTAGACAGATCCACTTaGTATTTTCGGCCCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLGELVLESWPMWVGDYVLDRST*YFRPSS Trigger: TGAGCTGGGCCGAAAATACCAAGTGGATCTGTCTAA...TACATAGTCACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACCTAAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
||
| CDS-3UTR CCA 90 bp | CCAGTACCACAGTCTGAGGGGAAGGCCAATGTTAAGTATAGAAATCAACCATGGAAGACAATCTCCGTGTaGTCCCTGAGGATCTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: PVPQSEGKANVKYRNQPWKTISV*SLRISS Trigger: GGATGAGATCCTCAGGGACCACACGGAGATTGTCTT...CCATGGTTGATTTCTATACTTAACATTGGCCTTCCCCTCAGACTGTGGTACTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| 3UTR CAA 72 bp | GACCTTCATATTCCCACCTCAAGCCTTCCAGTTTCCTaGCTGTTTCTCAGTTGCTTGGCTCATTCATCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: DLHIPTSSLPVS*LFLSCLAHSSR Trigger: CCTAGATGAATGAGCCAAGCAACTGAGAAACAGCAAGGAAACTGGAAGGCTTGAGGTGGGAATATGAAGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| 3UTR CAA 72 bp | GGATCCTATTATAGATGGTTGCGAGCTATCATGTGGTaGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GSYYRWLRAIMW*LGIELRTSGRA Trigger: TGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGATAGCTCGCAACCATCTATAATAGGATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR CCA 90 bp | ACTCTGAGACTAAGTATACCGCTCCTAACAATATTGTTTATGCTCTTCATTTACTGCCCTGTACCAGGATaGTGGAGCATCGGTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TLRLSIPLLTILFMLFIYCPVPG*WSIGPG Trigger: TCCTGGACCGATGCTCCACCATCCTGGTACAGGGCA...GTAAATGAAGAGCATAAACAATATTGTTAGGAGCGGTATACTTAGTCTCAGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR TCA 90 bp | ACTCTGAGACTAAGTATACCGCTCCTAACAATATTGTTTATGCTCTTCATTTACTTTCTCCCTCTCGGATaGCCAGAGCTTGCTGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TLRLSIPLLTILFMLFIYFLPLG*PELAEA Trigger: TGCCTCAGCAAGCTCTGGTCATCCGAGAGGGAGAAA...GTAAATGAAGAGCATAAACAATATTGTTAGGAGCGGTATACTTAGTCTCAGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR CCA 90 bp | ACTCTGAGACTAAGTATACCGCTCCTAACAATATTGTTTATGCTCTTCATTTACGGTCACAGTGCCCAGTaGAAGGGGGATGTTGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: TLRLSIPLLTILFMLFIYGHSAQ*KGDVGN Trigger: ATTGCCAACATCCCCCTTCCACTGGGCACTGTGACC...GTAAATGAAGAGCATAAACAATATTGTTAGGAGCGGTATACTTAGTCTCAGAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR CCA 90 bp | TCAACTGATGAGCCATCTTTTCAGCTCCCTAATTCTTGTCTTGACCTTCATATTTGTCTGGGAGTTTCGTaGCTGCCTCTTCATGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: STDEPSFQLPNSCLDLHICLGVS*LPLHDV Trigger: GACATCATGAAGAGGCAGCCACGAAACTCCCAGACA...AATATGAAGGTCAAGACAAGAATTAGGGAGCTGAAAAGATGGCTCATCAGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR TCA 90 bp | ACTCTGAGACTAAGTATACCGCTCCTAACAATATTGTTTATGCTCTTCATTTACCCTCATCTTCCTCACTaGGCCACAGGACAGCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: TLRLSIPLLTILFMLFIYPHLPH*ATGQLN Trigger: ATTGAGCTGTCCTGTGGCTCAGTGAGGAAGATGAGG...GTAAATGAAGAGCATAAACAATATTGTTAGGAGCGGTATACTTAGTCTCAGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR GCA 90 bp | ACTCTGAGACTAAGTATACCGCTCCTAACAATATTGTTTATGCTCTTCATTTACCCAGAGCCTGGATCATaGCAATCTGTCCGTAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TLRLSIPLLTILFMLFIYPEPGS*QSVRKP Trigger: TGGCTTACGGACAGATTGGCATGATCCAGGCTCTGG...GTAAATGAAGAGCATAAACAATATTGTTAGGAGCGGTATACTTAGTCTCAGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR TCA 90 bp | ACTCTGAGACTAAGTATACCGCTCCTAACAATATTGTTTATGCTCTTCATTTACATGACCAGAGCTTGCTaGGGCACCATGTTCTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TLRLSIPLLTILFMLFIYMTRAC*GTMFLK Trigger: CTTCAAGAACATGGTGCCTCAGCAAGCTCTGGTCAT...GTAAATGAAGAGCATAAACAATATTGTTAGGAGCGGTATACTTAGTCTCAGAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR GCA 90 bp | TCAACTGATGAGCCATCTTTTCAGCTCCCTAATTCTTGTCTTGACCTTCATATTATCAGCTGGATGAAATaGTCGATCTCCATGGCTATG | + |
|
Preference number: 4 (lower is better) Translates to: STDEPSFQLPNSCLDLHIISWMK*SISMAM Trigger: CATAGCCATGGAGATCGAGCATTTCATCCAGCTGAT...AATATGAAGGTCAAGACAAGAATTAGGGAGCTGAAAAGATGGCTCATCAGTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR GCA 90 bp | ACTCTGAGACTAAGTATACCGCTCCTAACAATATTGTTTATGCTCTTCATTTACAGAAGAAACAGATATTaGGCGTCTCCAAGGGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLRLSIPLLTILFMLFIYRRNRY*ASPRGS Trigger: AGAACCCCTTGGAGACGCGCAATATCTGTTTCTTCT...GTAAATGAAGAGCATAAACAATATTGTTAGGAGCGGTATACTTAGTCTCAGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| 3UTR CAA 72 bp | CCAGATGACTTTATTGATTGTGCGGGAGGTAAACTTTaGTTCAAAGTCAATGATCTCAAATTAATCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PDDFIDCAGGKL*FKVNDLKLIRP Trigger: GGGCCTGATTAATTTGAGATCATTGACTTTGAACAAAAGTTTACCTCCCGCACAATCAATAAAGTCATCTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| 3UTR CAA 72 bp | CATACTCTGAGACTAAGTATACCGCTCCTAACAATATaGTTTATGCTCTTCATTTACCGACCAGATGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: HTLRLSIPLLTI*FMLFIYRPDDF Trigger: AAAGTCATCTGGTCGGTAAATGAAGAGCATAAACAATATTGTTAGGAGCGGTATACTTAGTCTCAGAGTATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
||
| CDS-3UTR CAA 90 bp | AGCCCCGGGAGCTTAGGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTCCCGCGCTTCGGCACTaGCCCACGGCATCCGGCACG | + |
|
Preference number: 5 (lower is better) Translates to: SPGSLGELVLESWPMWVGPALRH*PTASGT Trigger: CGTGCCGGATGCCGTGGGCAAGTGCCGAAGCGCGGG...ACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACCTAAGCTCCCGGGGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
||
| CDS-3UTR CAA 90 bp | TGGAATCCTGGCCTATGTGGGTTGGTGACTATGTACAGAGGCCTCTGCCTGGTATTGCGAGCCATGCGCTaGGCTGTCAGCGTCAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: WNPGLCGLVTMYRGLCLVLRAMR*AVSVRH Trigger: GTGCCTGACGCTGACAGCCAAGCGCATGGCTCGCAA...TACCAGGCAGAGGCCTCTGTACATAGTCACCAACCCACATAGGCCAGGATTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
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| CDS-3UTR CAA 90 bp | CTTGGCTGGGAGACAGACCTAATCTCTCCGCCTGGCTTCCTTTTCTGGCCCCAGCTCGTAGGTCCACTCTaGTCCATAGCTGTCCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LGWETDLISPPGFLFWPQLVGPL*SIAVLQ Trigger: CTGGAGGACAGCTATGGACAAGAGTGGACCTACGAG...CTGGGGCCAGAAAAGGAAGCCAGGCGGAGAGATTAGGTCTGTCTCCCAGCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| CDS-3UTR CAA 90 bp | GAAGGATCTGAAGAGGTGATCTGTCCCAGGGTTCACAGCGGGACCTGTGGAGCAGAGTTGCGACGGGTCTaGCAGATGATGAGGTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: EGSEEVICPRVHSGTCGAELRRV*QMMRSA Trigger: GGCTGACCTCATCATCTGCAAGACCCGTCGCAACTC...TGCTCCACAGGTCCCGCTGTGAACCCTGGGACAGATCACCTCTTCAGATCCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| CDS-3UTR CAA 90 bp | GGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTGACTATGTACAGAGGGTCACCATGATCACCTaGATGCCCGCGCTTCGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: GELVLESWPMWVGDYVQRVTMIT*MPALRH Trigger: GTGCCGAAGCGCGGGCATCAAGGTGATCATGGTGAC...CCTCTGTACATAGTCACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
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| CDS-3UTR CAA 90 bp | AGCCCCGGGAGCTTAGGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTCTTAGACAGATCCACTaGGTATTTTCGGCCCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SPGSLGELVLESWPMWVGLRQIH*VFSAQL Trigger: GAGCTGGGCCGAAAATACCAAGTGGATCTGTCTAAG...ACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACCTAAGCTCCCGGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
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| CDS-3UTR CAA 90 bp | AGCCCCGGGAGCTTAGGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTGAGAAGAAACAGATATaGCGCGTCTCCAAGGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SPGSLGELVLESWPMWVGEKKQI*RVSKGF Trigger: GAACCCCTTGGAGACGCGCAATATCTGTTTCTTCTC...ACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACCTAAGCTCCCGGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
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| CDS-3UTR CAA 90 bp | CTGGAAAGCCAGGGATGTCCTGGAAACTTTTCTACACTGATTCCTGCCAATGGCTTGCGAGCCATGCGCTaGGCTGTCAGCGTCAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LESQGCPGNFSTLIPANGLRAMR*AVSVRH Trigger: GTGCCTGACGCTGACAGCCAAGCGCATGGCTCGCAA...GCCATTGGCAGGAATCAGTGTAGAAAAGTTTCCAGGACATCCCTGGCTTTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| CDS-3UTR CAA 90 bp | TGGAATCCTGGCCTATGTGGGTTGGTGACTATGTACAGAGGCCTCTGCCTGGTAGAGTTGCGACGGGTCTaGCAGATGATGAGGTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: WNPGLCGLVTMYRGLCLVELRRV*QMMRSA Trigger: GGCTGACCTCATCATCTGCAAGACCCGTCGCAACTC...TACCAGGCAGAGGCCTCTGTACATAGTCACCAACCCACATAGGCCAGGATTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
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| CDS-3UTR CAA 90 bp | GACAGTTCCTTAGCAAACCTGAGCCCCGGGAGCTTAGGTGAGCTGGTGTTGGAATCATCCAAGGACAGCTaGTGGTCATCCATGGCAACC | + |
|
Preference number: 5 (lower is better) Translates to: DSSLANLSPGSLGELVLESSKDS*WSSMAT Trigger: GGTTGCCATGGATGACCACAAGCTGTCCTTGGATGA...TTCCAACACCAGCTCACCTAAGCTCCCGGGGCTCAGGTTTGCTAAGGAACTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
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| CDS-3UTR CAA 90 bp | GAAGGATCTGAAGAGGTGATCTGTCCCAGGGTTCACAGCGGGACCTGTGGAGCAGAGAAGAAACAGATATaGCGCGTCTCCAAGGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: EGSEEVICPRVHSGTCGAEKKQI*RVSKGF Trigger: GAACCCCTTGGAGACGCGCAATATCTGTTTCTTCTC...TGCTCCACAGGTCCCGCTGTGAACCCTGGGACAGATCACCTCTTCAGATCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| CDS-3UTR CAA 90 bp | AGCCCCGGGAGCTTAGGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTGTGCCTTCCACGCAGTaGGTAGAGAAGAAACAGATA | + |
|
Preference number: 5 (lower is better) Translates to: SPGSLGELVLESWPMWVGVPSTQ*VEKKQI Trigger: TATCTGTTTCTTCTCTACCAACTGCGTGGAAGGCAC...ACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACCTAAGCTCCCGGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
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| CDS-3UTR CAA 90 bp | GGGAGCTTAGGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTGACTATTCAAGAGGGATCTCCTaGCCCTGTACCAGGATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GSLGELVLESWPMWVGDYSRGIS*PCTRMV Trigger: CACCATCCTGGTACAGGGCAAGGAGATCCCTCTTGA...ATAGTCACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACCTAAGCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
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| CDS-3UTR CAA 90 bp | CTGGAAAGCCAGGGATGTCCTGGAAACTTTTCTACACTGATTCCTGCCAATGGCGTCACCATGATCACCTaGATGCCCGCGCTTCGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LESQGCPGNFSTLIPANGVTMIT*MPALRH Trigger: GTGCCGAAGCGCGGGCATCAAGGTGATCATGGTGAC...GCCATTGGCAGGAATCAGTGTAGAAAAGTTTCCAGGACATCCCTGGCTTTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| CDS-3UTR CAA 90 bp | GACAGTTCCTTAGCAAACCTGAGCCCCGGGAGCTTAGGTGAGCTGGTGTTGGAATGCACTACACACGCCTaGGCTTCTCTGGGATTGACT | + |
|
Preference number: 5 (lower is better) Translates to: DSSLANLSPGSLGELVLECTTHA*ASLGLT Trigger: AGTCAATCCCAGAGAAGCCAAGGCGTGTGTAGTGCA...TTCCAACACCAGCTCACCTAAGCTCCCGGGGCTCAGGTTTGCTAAGGAACTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
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| CDS-3UTR CAA 90 bp | GGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTGACTATGTACAGAGGCTCGTAGGTCCACTCTaGTCCATAGCTGTCCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GELVLESWPMWVGDYVQRLVGPL*SIAVLQ Trigger: CTGGAGGACAGCTATGGACAAGAGTGGACCTACGAG...CCTCTGTACATAGTCACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
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| CDS-3UTR CAA 90 bp | GCCTTATGGACAGAGAGGACCATTACCCAAGGATCAATGGGTCACTGGGTGGCATCGGATGACCAGAGCTaGCTGAGGCACCATGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: ALWTERTITQGSMGHWVASDDQS*LRHHVL Trigger: AAGAACATGGTGCCTCAGCAAGCTCTGGTCATCCGA...TGCCACCCAGTGACCCATTGATCCTTGGGTAATGGTCCTCTCTGTCCATAAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| CDS-3UTR CAA 90 bp | GCCTTATGGACAGAGAGGACCATTACCCAAGGATCAATGGGTCACTGGGTGGCACACGGAGATGTTCTCTaGTCCAGCCTTGAAGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: ALWTERTITQGSMGHWVAHGDVL*SSLEDS Trigger: GCTGTCTTCAAGGCTGGACAAGAGAACATCTCCGTG...TGCCACCCAGTGACCCATTGATCCTTGGGTAATGGTCCTCTCTGTCCATAAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| CDS-3UTR CAA 90 bp | GGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTGACTATGTACAGAGGCACGGAGATGTTCTCTaGTCCAGCCTTGAAGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: GELVLESWPMWVGDYVQRHGDVL*SSLEDS Trigger: GCTGTCTTCAAGGCTGGACAAGAGAACATCTCCGTG...CCTCTGTACATAGTCACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
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| CDS-3UTR CAA 90 bp | TCAACTGATGAGCCATCTTTTCAGCTCCCTAATTCTTGTCTTGACCTTCATATTCCCGCGCTTCGGCACTaGCCCACGGCATCCGGCACG | + |
|
Preference number: 5 (lower is better) Translates to: STDEPSFQLPNSCLDLHIPALRH*PTASGT Trigger: CGTGCCGGATGCCGTGGGCAAGTGCCGAAGCGCGGG...AATATGAAGGTCAAGACAAGAATTAGGGAGCTGAAAAGATGGCTCATCAGTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| CDS-3UTR CAA 90 bp | GTCATGAGCTACGCTGATTCTGCATGCTCTGGAAAGCCAGGGATGTCCTGGAAATGCACTACACACGCCTaGGCTTCTCTGGGATTGACT | + |
|
Preference number: 5 (lower is better) Translates to: VMSYADSACSGKPGMSWKCTTHA*ASLGLT Trigger: AGTCAATCCCAGAGAAGCCAAGGCGTGTGTAGTGCA...TTTCCAGGACATCCCTGGCTTTCCAGAGCATGCAGAATCAGCGTAGCTCATGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| CDS-3UTR CAA 90 bp | GCCTTATGGACAGAGAGGACCATTACCCAAGGATCAATGGGTCACTGGGTGGCAGTGCCTTCCACGCAGTaGGTAGAGAAGAAACAGATA | + |
|
Preference number: 5 (lower is better) Translates to: ALWTERTITQGSMGHWVAVPSTQ*VEKKQI Trigger: TATCTGTTTCTTCTCTACCAACTGCGTGGAAGGCAC...TGCCACCCAGTGACCCATTGATCCTTGGGTAATGGTCCTCTCTGTCCATAAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| CDS-3UTR CAA 90 bp | GAAGGATCTGAAGAGGTGATCTGTCCCAGGGTTCACAGCGGGACCTGTGGAGCAGTTTTGAAAAGCATCTaGCATCTCCTTGTCAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: EGSEEVICPRVHSGTCGAVLKSI*HLLVKR Trigger: CCTCTTGACAAGGAGATGCAAGATGCTTTTCAAAAC...TGCTCCACAGGTCCCGCTGTGAACCCTGGGACAGATCACCTCTTCAGATCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| CDS-3UTR CAA 90 bp | GACAGTTCCTTAGCAAACCTGAGCCCCGGGAGCTTAGGTGAGCTGGTGTTGGAACTCCATGTAGGCGTTTaGAAAAGCATCTTGCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: DSSLANLSPGSLGELVLELHVGV*KSILHL Trigger: GAGATGCAAGATGCTTTTCAAAACGCCTACATGGAG...TTCCAACACCAGCTCACCTAAGCTCCCGGGGCTCAGGTTTGCTAAGGAACTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
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| CDS-3UTR CAA 90 bp | GCCTTATGGACAGAGAGGACCATTACCCAAGGATCAATGGGTCACTGGGTGGCACCAAAAATCAGGATCTaGTTCTTCATGCCCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ALWTERTITQGSMGHWVAPKIRI*FFMPCW Trigger: CCAGCAGGGCATGAAGAACAAGATCCTGATTTTTGG...TGCCACCCAGTGACCCATTGATCCTTGGGTAATGGTCCTCTCTGTCCATAAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| CDS-3UTR CAA 90 bp | CTGGAAAGCCAGGGATGTCCTGGAAACTTTTCTACACTGATTCCTGCCAATGGCGATGAGTTATCCACCTaGCAACCGTGGGAAGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: LESQGCPGNFSTLIPANGDELST*QPWEEM Trigger: CATCTCTTCCCACGGTTGCAAGGTGGATAACTCATC...GCCATTGGCAGGAATCAGTGTAGAAAAGTTTCCAGGACATCCCTGGCTTTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| CDS-3UTR CAA 90 bp | AGCTTAGGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTGACTATGTAGATGAGTTATCCACCTaGCAACCGTGGGAAGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: SLGELVLESWPMWVGDYVDELST*QPWEEM Trigger: CATCTCTTCCCACGGTTGCAAGGTGGATAACTCATC...TACATAGTCACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACCTAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
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| CDS-3UTR CAA 90 bp | CCAGTACCACAGTCTGAGGGGAAGGCCAATGTTAAGTATAGAAATCAACCATGGTCAAGAGGGATCTCCTaGCCCTGTACCAGGATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PVPQSEGKANVKYRNQPWSRGIS*PCTRMV Trigger: CACCATCCTGGTACAGGGCAAGGAGATCCCTCTTGA...CCATGGTTGATTTCTATACTTAACATTGGCCTTCCCCTCAGACTGTGGTACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| CDS-3UTR CAA 90 bp | GCCTTATGGACAGAGAGGACCATTACCCAAGGATCAATGGGTCACTGGGTGGCATTCTCTGGGATTGACTaGACTCACAGGAATGTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: ALWTERTITQGSMGHWVAFSGID*THRNVE Trigger: CTCAACATTCCTGTGAGTCAAGTCAATCCCAGAGAA...TGCCACCCAGTGACCCATTGATCCTTGGGTAATGGTCCTCTCTGTCCATAAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| CDS-3UTR CAA 90 bp | GGGAGCTTAGGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTGACTATGTTTTGAAAAGCATCTaGCATCTCCTTGTCAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GSLGELVLESWPMWVGDYVLKSI*HLLVKR Trigger: CCTCTTGACAAGGAGATGCAAGATGCTTTTCAAAAC...ATAGTCACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACCTAAGCTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
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| CDS-3UTR CAA 90 bp | AGCTTAGGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTGACTATGTATTCTCTGGGATTGACTaGACTCACAGGAATGTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SLGELVLESWPMWVGDYVFSGID*THRNVE Trigger: CTCAACATTCCTGTGAGTCAAGTCAATCCCAGAGAA...TACATAGTCACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACCTAAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
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| CDS TCA 90 bp | AACAGAGCTTCTCTGTGGGAAAGTTCAGCTCATCTGTATCAAATTTaGAGCCCCGAGGAAACTTTCCAGAAGGCAGGTTCAGCTGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: NRASLWESSAHLYQI*SPEETFQKAGSADR Trigger: TCTGTCAGCTGAACCTGCCTTCTGGAAAGTTTCCTCGGGGCTTCAAATTTGATACAGATGAGCTGAACTTTCCCACAGAGAAGCTCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085913.11 ENSMUST00000097464.4 |
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| CDS-3UTR CAA 90 bp | CTGGAAAGCCAGGGATGTCCTGGAAACTTTTCTACACTGATTCCTGCCAATGGCTCATCTGTATCAAATTaGAAGCCCCGAGGAAACTTT | + |
|
Preference number: 5 (lower is better) Translates to: LESQGCPGNFSTLIPANGSSVSN*KPRGNF Trigger: AAAGTTTCCTCGGGGCTTCAAATTTGATACAGATGA...GCCATTGGCAGGAATCAGTGTAGAAAAGTTTCCAGGACATCCCTGGCTTTCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| CDS-3UTR CAA 90 bp | TTAGGTGAGCTGGTGTTGGAATCCTGGCCTATGTGGGTTGGTGACTATGTACAGTCATCTGTATCAAATTaGAAGCCCCGAGGAAACTTT | + |
|
Preference number: 5 (lower is better) Translates to: LGELVLESWPMWVGDYVQSSVSN*KPRGNF Trigger: AAAGTTTCCTCGGGGCTTCAAATTTGATACAGATGA...CTGTACATAGTCACCAACCCACATAGGCCAGGATTCCAACACCAGCTCACCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097464.4 |
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| CDS-3UTR CAA 90 bp | ACTCTGAGACTAAGTATACCGCTCCTAACAATATTGTTTATGCTCTTCATTTACTCATCCAAGGACAGCTaGTGGTCATCCATGGCAACC | + |
|
Preference number: 5 (lower is better) Translates to: TLRLSIPLLTILFMLFIYSSKDS*WSSMAT Trigger: GGTTGCCATGGATGACCACAAGCTGTCCTTGGATGA...GTAAATGAAGAGCATAAACAATATTGTTAGGAGCGGTATACTTAGTCTCAGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| CDS-3UTR CAA 90 bp | ACTCTGAGACTAAGTATACCGCTCCTAACAATATTGTTTATGCTCTTCATTTACCTTAGACAGATCCACTaGGTATTTTCGGCCCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TLRLSIPLLTILFMLFIYLRQIH*VFSAQL Trigger: GAGCTGGGCCGAAAATACCAAGTGGATCTGTCTAAG...GTAAATGAAGAGCATAAACAATATTGTTAGGAGCGGTATACTTAGTCTCAGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| CDS-3UTR CAA 90 bp | TCAACTGATGAGCCATCTTTTCAGCTCCCTAATTCTTGTCTTGACCTTCATATTCTCCATGTAGGCGTTTaGAAAAGCATCTTGCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: STDEPSFQLPNSCLDLHILHVGV*KSILHL Trigger: GAGATGCAAGATGCTTTTCAAAACGCCTACATGGAG...AATATGAAGGTCAAGACAAGAATTAGGGAGCTGAAAAGATGGCTCATCAGTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085913.11 |
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| CDS CAA 72 bp | AGCTCGCTGATTGGTGAGGCCCTTAGACAGATCCACTaGGTATTTTCGGCCCAGCTCATCCAAGGACAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: SSLIGEALRQIH*VFSAQLIQGQL Trigger: AAGCTGTCCTTGGATGAGCTGGGCCGAAAATACCAAGTGGATCTGTCTAAGGGCCTCACCAATCAGCGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085913.11 ENSMUST00000097464.4 |
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| CDS CAA 72 bp | ACTTGGTATTTTCGGCCCAGCTCATCCAAGGACAGCTaGTGGTCATCCATGGCAACCTCCTTCTTCAGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: TWYFRPSSSKDS*WSSMATSFFSS Trigger: TGAGCTGAAGAAGGAGGTTGCCATGGATGACCACAAGCTGTCCTTGGATGAGCTGGGCCGAAAATACCAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085913.11 ENSMUST00000097464.4 |
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| CDS CAA 72 bp | ACAGCCGCTAGCACGATACCTAGATATAAATTATCGTaGGATGGTTCGTCCTCCATAGCGGCCAGGATACCA | + |
|
Preference number: 6 (lower is better) Translates to: TAASTIPRYKLS*DGSSSIAARIP Trigger: TGGTATCCTGGCCGCTATGGAGGACGAACCATCCAACGATAATTTATATCTAGGTATCGTGCTAGCGGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085913.11 ENSMUST00000097464.4 |
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| CDS TCA 72 bp | TCTCTGTGGGAAAGTTCAGCTCATCTGTATCAAATTTaGAGCCCCGAGGAAACTTTCCAGAAGGCAGGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SLWESSAHLYQI*SPEETFQKAGS Trigger: TGAACCTGCCTTCTGGAAAGTTTCCTCGGGGCTTCAAATTTGATACAGATGAGCTGAACTTTCCCACAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085913.11 ENSMUST00000097464.4 |
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| CDS CAA 72 bp | TTCTCTGTGGGAAAGTTCAGCTCATCTGTATCAAATTaGAAGCCCCGAGGAAACTTTCCAGAAGGCAGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: FSVGKFSSSVSN*KPRGNFPEGRF Trigger: GAACCTGCCTTCTGGAAAGTTTCCTCGGGGCTTCAAATTTGATACAGATGAGCTGAACTTTCCCACAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085913.11 ENSMUST00000097464.4 |
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