RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATG2A (Mus musculus)

Ensembl gene IDs: ENSMUSG00000024773

Ensembl transcript IDs: ENSMUST00000045351.13, ENSMUST00000145600.2

Found 598 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTaGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGGCCATCCT +
Preference number: 1 (lower is better)
Translates to: RAEAPKPGGPTLSAS*QQAGWAGILHSGHP
Trigger: AGGATGGCCACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
3UTR CCA 90 bp AAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTaGGCAGGTATCCTTCACAGTGGCCATCCTTTGAAGGACCTGGTG +
Preference number: 1 (lower is better)
Translates to: KPGGPTLSASWQQAG*AGILHSGHPLKDLV
Trigger: CACCAGGTCCTTCAAAGGATGGCCACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
3UTR CCA 90 bp GGGTCTCACAGGTACAGAGGACCTGGACGTGGCCTGGGCTGGCGGTaGGCAAGTTTATTCCACTTCATGCAGACACTGACCCACACGCTC +
Preference number: 1 (lower is better)
Translates to: GSHRYRGPGRGLGWR*ASLFHFMQTLTHTL
Trigger: GAGCGTGTGGGTCAGTGTCTGCATGAAGTGGAATAAACTTGCCCACCGCCAGCCCAGGCCACGTCCAGGTCCTCTGTACCTGTGAGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
3UTR CCA 90 bp GTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTaGCTGGACACGGTGAGCATGTTGGGACAGTGGGTGGATCTTGGG +
Preference number: 1 (lower is better)
Translates to: VTAIRKTGSWWHHCG*LDTVSMLGQWVDLG
Trigger: CCCAAGATCCACCCACTGTCCCAACATGCTCACCGTGTCCAGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
3UTR TCA 90 bp GGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGGCCATCCTTTaGAGGACCTGGTGGCCTAGCTGTGGGTCACAGCAATCAGGAAAA +
Preference number: 1 (lower is better)
Translates to: GNKQAGQVSFTVAIL*RTWWPSCGSQQSGK
Trigger: TTTTCCTGATTGCTGTGACCCACAGCTAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
3UTR TCA 90 bp GCCTGGGCTGGCGGTGGGCAAGTTTATTCCACTTCATGCAGACACTaGCCCACACGCTCAGAGATCTTAAAAATACACCGACCCACATGG +
Preference number: 1 (lower is better)
Translates to: AWAGGGQVYSTSCRH*PTRSEILKIHRPTW
Trigger: CCATGTGGGTCGGTGTATTTTTAAGATCTCTGAGCGTGTGGGTCAGTGTCTGCATGAAGTGGAATAAACTTGCCCACCGCCAGCCCAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
3UTR CAA 90 bp CAGGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTaGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGGCCATCC +
Preference number: 2 (lower is better)
Translates to: QGRGPKAGRPHSLGQ*ATSRLGRYPSQWPS
Trigger: GGATGGCCACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
3UTR-3UTR CCA 90 bp GGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGTGGCACCACTGTGGCTaGCTGGACACGGTGAGCATG +
Preference number: 2 (lower is better)
Translates to: GQRPQSREAPLSRPVGNKWHHCG*LDTVSM
Trigger: CATGCTCACCGTGTCCAGCCAGCCACAGTGGTGCCA...CTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
3UTR-3UTR CCA 90 bp GGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCTGGCACCACTGTGGCTaGCTGGACACGGTGAGCATG +
Preference number: 2 (lower is better)
Translates to: GRGPKAGRPHSLGQLATSWHHCG*LDTVSM
Trigger: CATGCTCACCGTGTCCAGCCAGCCACAGTGGTGCCA...GCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
3UTR-3UTR TCA 90 bp CACAGACAGGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGACAGTGGCCATCCTTTaGAGGACCTGGTGGCCTAGC +
Preference number: 2 (lower is better)
Translates to: HRQGRGPKAGRPHSLGQLTVAIL*RTWWPS
Trigger: GCTAGGCCACCAGGTCCTTCAAAGGATGGCCACTGT...CAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCCTGTCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
3UTR-3UTR CCA 90 bp GGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGAGCATGTTGGGACAGTaGGTGGATCTTGGGTGCCTG +
Preference number: 2 (lower is better)
Translates to: GQRPQSREAPLSRPVGNKSMLGQ*VDLGCL
Trigger: CAGGCACCCAAGATCCACCCACTGTCCCAACATGCT...CTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
3UTR-3UTR CCA 90 bp CCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGAAAACAGGGAGCTGGTaGCACCACTGTGGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: PLSRPVGNKQAGQVSFTVKTGSW*HHCGWL
Trigger: CAGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTT...CACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
3UTR-3UTR CCA 90 bp CGTGAGACACGGAGAGACACTTGGCTGAGTGGGGTCCATGGGTCCAAAAGCCTCAACAAGGCAGCAGTGTaGGCCCAGGTAGCAGGGAGA +
Preference number: 2 (lower is better)
Translates to: RETRRDTWLSGVHGSKSLNKAAV*AQVAGR
Trigger: TCTCCCTGCTACCTGGGCCCACACTGCTGCCTTGTT...GAGGCTTTTGGACCCATGGACCCCACTCAGCCAAGTGTCTCTCCGTGTCTCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
3UTR-3UTR CCA 90 bp CCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGAGCATGTTGGGACAGTaGGTGGATCTTGGGTGCCTG +
Preference number: 2 (lower is better)
Translates to: PLSRPVGNKQAGQVSFTVSMLGQ*VDLGCL
Trigger: CAGGCACCCAAGATCCACCCACTGTCCCAACATGCT...CACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
3UTR-3UTR CCA 90 bp CAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGGCCATCCTTTGAAAGGAAAACAGGGAGCTaGTGGCACCACTGTGGCTGG +
Preference number: 2 (lower is better)
Translates to: QLATSRLGRYPSQWPSFERKTGS*WHHCGW
Trigger: CCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCT...TTCAAAGGATGGCCACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
3UTR CCA 72 bp GCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTaGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGT +
Preference number: 3 (lower is better)
Translates to: APKPGGPTLSAS*QQAGWAGILHS
Trigger: ACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
3UTR CCA 72 bp ATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTaGCTGGACACGGTGAGCATGTTGGGACAGTGGGTG +
Preference number: 3 (lower is better)
Translates to: IRKTGSWWHHCG*LDTVSMLGQWV
Trigger: CACCCACTGTCCCAACATGCTCACCGTGTCCAGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
3UTR CCA 72 bp CTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTaGCACCACTGTGGCTGGCTGGACACGGTGAGCATG +
Preference number: 3 (lower is better)
Translates to: LWVTAIRKTGSW*HHCGWLDTVSM
Trigger: CATGCTCACCGTGTCCAGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
3UTR CCA 72 bp GGCCCCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTaGGCAGGTATCCTTCACAGTGGCCATCCTTTGAAG +
Preference number: 3 (lower is better)
Translates to: GPTLSASWQQAG*AGILHSGHPLK
Trigger: CTTCAAAGGATGGCCACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
3UTR-3UTR CAA 90 bp GTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTGACACGGTGAGCATGTaGGGACAGTGGGTGGATCTT +
Preference number: 3 (lower is better)
Translates to: VGHSNQENRELVAPLWLADTVSM*GQWVDL
Trigger: AAGATCCACCCACTGTCCCAACATGCTCACCGTGTC...AGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
3UTR-3UTR CAA 90 bp TGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTGGACACGGTGAGCATGTaGGGACAGTGGGTGGATCTT +
Preference number: 3 (lower is better)
Translates to: WVTAIRKTGSWWHHCGWLDTVSM*GQWVDL
Trigger: AAGATCCACCCACTGTCCCAACATGCTCACCGTGTC...CAGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
3UTR TCA 72 bp CAGGCTGGGCAGGTATCCTTCACAGTGGCCATCCTTTaGAGGACCTGGTGGCCTAGCTGTGGGTCACAGCAA +
Preference number: 3 (lower is better)
Translates to: QAGQVSFTVAIL*RTWWPSCGSQQ
Trigger: TTGCTGTGACCCACAGCTAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGAAGGATACCTGCCCAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
3UTR CCA 72 bp AGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTaGCTGGCTGGACACGGTGAGCATGTTGGGACAGTG +
Preference number: 3 (lower is better)
Translates to: SNQENRELVAPL*LAGHGEHVGTV
Trigger: CACTGTCCCAACATGCTCACCGTGTCCAGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp GGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGGGCGCAGGGTCGGGCTaGGGCTTCGGAGCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: GQRPQSREAPLSRPVGNKGAGSG*GFGARV
Trigger: CACTCTGGCTCCGAAGCCTCAGCCCGACCCTGCGCC...CTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp GGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGTCAGACTGCCCTTCCTaGGGGCTGCCGGGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: GQRPQSREAPLSRPVGNKSDCPS*GLPGRL
Trigger: CAGCCGGCCCGGCAGCCCCCAGGAAGGGCAGTCTGA...CTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp AAGTGCACAGACAGGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAAGGCAGGCGGCTGGTaGACGTCCACAGGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: KCTDRAEAPKPGGPTLSAKAGGW*TSTGGA
Trigger: GGCCCCACCTGTGGACGTGCACCAGCCGCCTGCCTT...GGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCCTGTCTGTGCACTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp GGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCGGCCAGGCCCACTGTTaGGCTCTGAGCGGAACTGGG +
Preference number: 4 (lower is better)
Translates to: GRGPKAGRPHSLGQLATSGQAHC*ALSGTG
Trigger: CCCAGTTCCGCTCAGAGCTCAACAGTGGGCCTGGCC...GCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp AAGTGCACAGACAGGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCTGTGTGTGGCGCAGATaGGCGCAGGGTCGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: KCTDRAEAPKPGGPTLSACVWRR*AQGRAE
Trigger: CTCAGCCCGACCCTGCGCCCATCTGCGCCACACACA...GGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCCTGTCTGTGCACTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp AGACAGGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAGCAGCTGTGTCACGATaGGCTCCCCGTCTCGAGGCG +
Preference number: 4 (lower is better)
Translates to: RQGRGPKAGRPHSLGQLAAAVSR*APRLEA
Trigger: CGCCTCGAGACGGGGAGCCCATCGTGACACAGCTGC...TGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCCTGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CACAGACAGGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCACAACCGAGTGCATaGGGCCCACGCCTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: HRQGRGPKAGRPHSLGQLAQPSA*GPRLPA
Trigger: TGCTGGGAGGCGTGGGCCCCATGCACTCGGTTGTGC...CAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCCTGTCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp CCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCCATGAGGCCCAACTCTaGGAGTCCGCAGCCCCTGGT +
Preference number: 4 (lower is better)
Translates to: PKAGRPHSLGQLATSRLGHEAQL*ESAAPG
Trigger: ACCAGGGGCTGCGGACTCTCAGAGTTGGGCCTCATG...GCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS-3UTR TCA 90 bp CCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCGCTGCAGCCCCCGAATaGGGCGCCCATCTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: PKAGRPHSLGQLATSRLGAAAPE*GAHLSC
Trigger: ACAGGAAAGATGGGCGCCTCATTCGGGGGCTGCAGC...GCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp CAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGTGGCTGTGGTGGGTCTaGCTGGGAGGGCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: QSREAPLSRPVGNKQAGQWLWWV*LGGQLL
Trigger: GAGGAGCTGCCCTCCCAGGCAGACCCACCACAGCCA...CTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp CCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCGAGGCTGGCTCAGTCTaGCCTCAGTGCTGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: PKAGRPHSLGQLATSRLGEAGSV*PQCCPS
Trigger: GGAAGGGCAGCACTGAGGGCAGACTGAGCCAGCCTC...GCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp AAGTGCACAGACAGGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCGCATGTTGGAGTGTGTaGGCCGTGGCAGCCGCTCAC +
Preference number: 4 (lower is better)
Translates to: KCTDRAEAPKPGGPTLSAACWSV*AVAAAH
Trigger: GTGAGCGGCTGCCACGGCGCACACACTCCAACATGC...GGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCCTGTCTGTGCACTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp AGACAGGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACACCCAGGAGCCCATaGCGGCAGCAGAGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: RQGRGPKAGRPHSLGQLATPRSP*RQQSLL
Trigger: CAAGAGGCTCTGCTGCCGGCATGGGCTCCTGGGTGT...TGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCCTGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp AGACAGGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAATCTTGCCACCCGAGTaGGGTGGGGTTGAGGGTCGG +
Preference number: 4 (lower is better)
Translates to: RQGRGPKAGRPHSLGQLAILPPE*GGVEGR
Trigger: CCGACCCTCAACCCCACCCCACTCGGGTGGCAAGAT...TGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCCTGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp AGACAGGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAGTACCACACGGCTGCTaGGCACTGGGAAGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: RQGRGPKAGRPHSLGQLAVPHGC*ALGSGQ
Trigger: CTGCCCACTTCCCAGTGCCCAGCAGCCGTGTGGTAC...TGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCCTGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGCCCTCCGACGCTGCTaGTGGGAGCCACATGCAGTG +
Preference number: 4 (lower is better)
Translates to: QSREAPLSRPVGNKQAGQALRRC*WEPHAV
Trigger: CACTGCATGTGGCTCCCACCAGCAGCGTCGGAGGGC...CTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp CCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCGGGCTGTGGTGGTTCTaGGGGTTCTGGCAACCCTTC +
Preference number: 4 (lower is better)
Translates to: PKAGRPHSLGQLATSRLGGLWWF*GFWQPF
Trigger: GAAGGGTTGCCAGAACCCTCAGAACCACCACAGCCC...GCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS-3UTR TCA 90 bp CCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCCCTCACAGAGCGCAGTaGTCCGACCCTTCAGCACTG +
Preference number: 4 (lower is better)
Translates to: PKAGRPHSLGQLATSRLGPHRAQ*SDPSAL
Trigger: CAGTGCTGAAGGGTCGGATCACTGCGCTCTGTGAGG...GCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp GGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCGTGGTCAGTGAGAAGTaGAGCCCAGGGGACAGCCAC +
Preference number: 4 (lower is better)
Translates to: GRGPKAGRPHSLGQLATSVVSEK*SPGDSH
Trigger: GTGGCTGTCCCCTGGGCTGCACTTCTCACTGACCAC...GCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS-3UTR GCA 90 bp AGACAGGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAGTGCAGCTGCCGATTTaGAGAGGTGGCTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: RQGRGPKAGRPHSLGQLAVQLPI*RGGCGG
Trigger: CCCACCACAGCCACCTCTGCAAATCGGCAGCTGCAC...TGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCCTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp AGACAGGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCACTTGTCGGCCAGGCCTaGAGGGTCTGCAAGGTTGAC +
Preference number: 4 (lower is better)
Translates to: RQGRGPKAGRPHSLGQLALVGQA*RVCKVD
Trigger: GTCAACCTTGCAGACCCTGCAGGCCTGGCCGACAAG...TGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCCTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp CACAGACAGGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGGCGAGGGCTCAGGTTaGTGTAGCTCACACGGACTC +
Preference number: 4 (lower is better)
Translates to: HRQGRGPKAGRPHSLGQLGEGSG*CSSHGL
Trigger: GAGTCCGTGTGAGCTACAGCAACCTGAGCCCTCGCC...CAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCCTGTCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp GGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCTCCAGGAGCTGGGAGTaGCAGCTCTGTTCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: GRGPKAGRPHSLGQLATSSRSWE*QLCSGG
Trigger: CCCACCTGAACAGAGCTGGCACTCCCAGCTCCTGGA...GCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp CAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGAGGCTGGCTCAGTCTaGCCTCAGTGCTGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: QSREAPLSRPVGNKQAGQEAGSV*PQCCPS
Trigger: GGAAGGGCAGCACTGAGGGCAGACTGAGCCAGCCTC...CTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp CAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGCATGTTGGAGTGTGTaGGCCGTGGCAGCCGCTCAC +
Preference number: 4 (lower is better)
Translates to: QSREAPLSRPVGNKQAGQACWSV*AVAAAH
Trigger: GTGAGCGGCTGCCACGGCGCACACACTCCAACATGC...CTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCCGGAGCCAGAGTGACTaGGGAAGCTCAGGATCTCCG +
Preference number: 4 (lower is better)
Translates to: PKAGRPHSLGQLATSRLGRSQSD*GSSGSP
Trigger: CGGAGATCCTGAGCTTCCCCAGTCACTCTGGCTCCG...GCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp AGACAGGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCACGGAGCCAGAGTGACTaGGGAAGCTCAGGATCTCCG +
Preference number: 4 (lower is better)
Translates to: RQGRGPKAGRPHSLGQLARSQSD*GSSGSP
Trigger: CGGAGATCCTGAGCTTCCCCAGTCACTCTGGCTCCG...TGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCCTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp GTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTTCAGCCCGCACAGCCTaGCCAGCCCAGGGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: VGHSNQENRELVAPLWLASARTA*PAQGSR
Trigger: CCGGGACCCCTGGGCTGGCCAGGCTGTGCGGGCTGA...AGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CACAGACAGGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGCCCACTGTGTGCCACTaGACTGGGGGTTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: HRQGRGPKAGRPHSLGQLPTVCH*TGGSGS
Trigger: TGACCCTGAACCCCCAGTCCAGTGGCACACAGTGGG...CAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCCTGTCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp GGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCCAGCAGCGCTGGATGTaGGAAGCAGGTCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: GRGPKAGRPHSLGQLATSQQRWM*EAGLQA
Trigger: AGCCTGCAGACCTGCTTCCCACATCCAGCGCTGCTG...GCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CACAGACAGGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGTCTGGGGCAGGTGTCTaGGGGACACCTGATGCCATC +
Preference number: 4 (lower is better)
Translates to: HRQGRGPKAGRPHSLGQLSGAGV*GTPDAI
Trigger: GATGGCATCAGGTGTCCCCCAGACACCTGCCCCAGA...CAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCCTGTCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp AGACAGGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAGCCTGGAGCTTCCGGTaGGTTGCTGGCTGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: RQGRGPKAGRPHSLGQLAAWSFR*VAGCLC
Trigger: ACAGAGACAGCCAGCAACCCACCGGAAGCTCCAGGC...TGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCCTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
3UTR CAA 72 bp GGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTaGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAG +
Preference number: 4 (lower is better)
Translates to: GPKAGRPHSLGQ*ATSRLGRYPSQ
Trigger: CTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp GGACGTGGCCTGGGCTGGCGGTGGGCAAGTTTATTCCACTTCATGCAGACACTGGGCGCAGGGTCGGGCTaGGGCTTCGGAGCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: GRGLGWRWASLFHFMQTLGAGSG*GFGARV
Trigger: CACTCTGGCTCCGAAGCCTCAGCCCGACCCTGCGCC...CAGTGTCTGCATGAAGTGGAATAAACTTGCCCACCGCCAGCCCAGGCCACGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS-3UTR TCA 90 bp CCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCCTGACTTGCACATCTTaGACCCCGAAGAGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: PKAGRPHSLGQLATSRLGLTCTS*TPKSQA
Trigger: CGCCTGGCTCTTCGGGGTTCAAGATGTGCAAGTCAG...GCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp GGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCTGACTTGCACATCTTaGACCCCGAAGAGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: GQRPQSREAPLSRPVGNKLTCTS*TPKSQA
Trigger: CGCCTGGCTCTTCGGGGTTCAAGATGTGCAAGTCAG...CTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp CAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTGGACACGGTGAGCATAAGGCAGGCGGCTGGTaGACGTCCACAGGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: QENRELVAPLWLAGHGEHKAGGW*TSTGGA
Trigger: GGCCCCACCTGTGGACGTGCACCAGCCGCCTGCCTT...ATGCTCACCGTGTCCAGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp GGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCAGACCCCACTCAGCTaGAGCAGCTTGTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GQRPQSREAPLSRPVGNKQTPLS*SSLCRK
Trigger: CTTCCTGCACAAGCTGCTGCAGCTGAGTGGGGTCTG...CTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp CCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGCTCCCAGGACAGCTaGACGGCTGTGCCAGTTAAC +
Preference number: 4 (lower is better)
Translates to: PKAGRPHSLGQLATSRLGSSQDS*TAVPVN
Trigger: GTTAACTGGCACAGCCGTGCAGCTGTCCTGGGAGCT...GCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp CACAGACAGGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGTGTGGGAAGCAGGTCTaGAGGCTCCCACATGAGCAG +
Preference number: 4 (lower is better)
Translates to: HRQGRGPKAGRPHSLGQLCGKQV*RLPHEQ
Trigger: CTGCTCATGTGGGAGCCTGCAGACCTGCTTCCCACA...CAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCCTGTCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp GGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCTGTGGGAAGCAGGTCTaGAGGCTCCCACATGAGCAG +
Preference number: 4 (lower is better)
Translates to: GRGPKAGRPHSLGQLATSCGKQV*RLPHEQ
Trigger: CTGCTCATGTGGGAGCCTGCAGACCTGCTTCCCACA...GCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp GGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCATGATGGGGCCTGGATaGAGCTGTGTCACGATGGGC +
Preference number: 4 (lower is better)
Translates to: GRGPKAGRPHSLGQLATSMMGPG*SCVTMG
Trigger: GCCCATCGTGACACAGCTGCATCCAGGCCCCATCAT...GCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp TGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTGGAGGCAGCCCCACGCTaGAGCCCCCGAATGAGGCGC +
Preference number: 4 (lower is better)
Translates to: WVTAIRKTGSWWHHCGWLEAAPR*SPRMRR
Trigger: GCGCCTCATTCGGGGGCTGCAGCGTGGGGCTGCCTC...CAGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp TCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGGCCAGTGCACGTCCACAGGTaGGGCCTGGCTGGGGTCCCG +
Preference number: 4 (lower is better)
Translates to: SLGQLATSRLGRYPSQWPVHVHR*GLAGVP
Trigger: CGGGACCCCAGCCAGGCCCCACCTGTGGACGTGCAC...TGGCCACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGGTGCACGTCCACAGGTaGGGCCTGGCTGGGGTCCCG +
Preference number: 4 (lower is better)
Translates to: PLSRPVGNKQAGQVSFTVVHVHR*GLAGVP
Trigger: CGGGACCCCAGCCAGGCCCCACCTGTGGACGTGCAC...CACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGGCCCTCTGGAAGCGTaGCCTGAGATGGGAGAAGTC +
Preference number: 4 (lower is better)
Translates to: QSREAPLSRPVGNKQAGQGPLEA*PEMGEV
Trigger: GACTTCTCCCATCTCAGGCCACGCTTCCAGAGGGCC...CTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp AGCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTTCAGCCCGCACAGCCTaGCCAGCCCAGGGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: SCGSQQSGKQGAGGTTVASARTA*PAQGSR
Trigger: CCGGGACCCCTGGGCTGGCCAGGCTGTGCGGGCTGA...AGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGCGTACATGGTCCGCTTaGAGGAGAAGGGCGAGGGCT +
Preference number: 4 (lower is better)
Translates to: QSREAPLSRPVGNKQAGQRTWSA*RRRARA
Trigger: AGCCCTCGCCCTTCTCCTCCAAGCGGACCATGTACG...CTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGCAGCAGCGCTGGATGTaGGAAGCAGGTCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: QSREAPLSRPVGNKQAGQQQRWM*EAGLQA
Trigger: AGCCTGCAGACCTGCTTCCCACATCCAGCGCTGCTG...CTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp AAGTGCACAGACAGGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCCCTCTGATGGGTAGATaGTTGGAGCCAGCTGAGCGG +
Preference number: 4 (lower is better)
Translates to: KCTDRAEAPKPGGPTLSAPLMGR*LEPAER
Trigger: CCGCTCAGCTGGCTCCAACCATCTACCCATCAGAGG...GGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCCTGTCTGTGCACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp AGACAGGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCACCTCTGATGGGTAGATaGTTGGAGCCAGCTGAGCGG +
Preference number: 4 (lower is better)
Translates to: RQGRGPKAGRPHSLGQLAPLMGR*LEPAER
Trigger: CCGCTCAGCTGGCTCCAACCATCTACCCATCAGAGG...TGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCCTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp GCACCACTGTGGCTGGCTGGACACGGTGAGCATGTTGGGACAGTGGGTGGATCTCTGGGCACTGGGAAGTaGGCAGGAGCGCGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: APLWLAGHGEHVGTVGGSLGTGK*AGARSR
Trigger: CCTGCTGCGCGCTCCTGCCCACTTCCCAGTGCCCAG...AGATCCACCCACTGTCCCAACATGCTCACCGTGTCCAGCCAGCCACAGTGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp AGCTGGTGGCACCACTGTGGCTGGCTGGACACGGTGAGCATGTTGGGACAGTGGGCCCTCCGACGCTGCTaGTGGGAGCCACATGCAGTG +
Preference number: 4 (lower is better)
Translates to: SWWHHCGWLDTVSMLGQWALRRC*WEPHAV
Trigger: CACTGCATGTGGCTCCCACCAGCAGCGTCGGAGGGC...CCACTGTCCCAACATGCTCACCGTGTCCAGCCAGCCACAGTGGTGCCACCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp GGCCTAGCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTCAGACTGCCCTTCCTaGGGGCTGCCGGGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: GLAVGHSNQENRELVAPLSDCPS*GLPGRL
Trigger: CAGCCGGCCCGGCAGCCCCCAGGAAGGGCAGTCTGA...CAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGCTAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCCTTCCGGTGGGTTGCTaGCTGTCTCTGTGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: PKAGRPHSLGQLATSRLGLPVGC*LSLCPQ
Trigger: CTGAGGACACAGAGACAGCCAGCAACCCACCGGAAG...GCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp GGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCTTCCGGTGGGTTGCTaGCTGTCTCTGTGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: GQRPQSREAPLSRPVGNKLPVGC*LSLCPQ
Trigger: CTGAGGACACAGAGACAGCCAGCAACCCACCGGAAG...CTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp AAGTGCACAGACAGGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCTGGTCAGAGGAGCTGTaGCTACTGCCTGGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: KCTDRAEAPKPGGPTLSAWSEEL*LLPGAS
Trigger: GGAAGCTCCAGGCAGTAGCCACAGCTCCTCTGACCA...GGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCCTGTCTGTGCACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp GGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGAAGGCCATGTTGCTGTaGACAGAGGAGCCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: GQRPQSREAPLSRPVGNKKAMLL*TEEPRS
Trigger: AGACCTGGGCTCCTCTGTTCACAGCAACATGGCCTT...CTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp CCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGGACAGTTCTGAGTaGCAATGGCAGGCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: PKAGRPHSLGQLATSRLGRDSSE*QWQAVE
Trigger: CTCCACTGCCTGCCATTGTCACTCAGAACTGTCCCT...GCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp CCACATGGCATCTATCCCCCACCTCCCCGTGAGACACGGAGAGACACTTGGCTGGGCCAGGCCCACTGTTaGGCTCTGAGCGGAACTGGG +
Preference number: 4 (lower is better)
Translates to: PHGIYPPPPRETRRDTWLGQAHC*ALSGTG
Trigger: CCCAGTTCCGCTCAGAGCTCAACAGTGGGCCTGGCC...CAGCCAAGTGTCTCTCCGTGTCTCACGGGGAGGTGGGGGATAGATGCCATGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp CCACATGGCATCTATCCCCCACCTCCCCGTGAGACACGGAGAGACACTTGGCTGAAGTGGGCCACCCGATaGCTGGGCCAGCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: PHGIYPPPPRETRRDTWLKWATR*LGQLLQ
Trigger: CTGCAGGAGCTGGCCCAGTCATCGGGTGGCCCACTT...CAGCCAAGTGTCTCTCCGTGTCTCACGGGGAGGTGGGGGATAGATGCCATGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp CTGGCTGGACACGGTGAGCATGTTGGGACAGTGGGTGGATCTTGGGTGCCTGCAGAGACGGGAGAGGCCTaGGGAAGTGGGCCACCCGAT +
Preference number: 4 (lower is better)
Translates to: LAGHGEHVGTVGGSWVPAETGEA*GSGPPD
Trigger: ATCGGGTGGCCCACTTCCTCAGGCCTCTCCCGTCTC...TGCAGGCACCCAAGATCCACCCACTGTCCCAACATGCTCACCGTGTCCAGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp CAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTGGACACGGTGAGCATAGAGGAGCGGGAAGGTaGGACCCTGGGGCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: QENRELVAPLWLAGHGEHRGAGR*DPGACE
Trigger: CTCACAGGCCCCAGGGTCTCACCTTCCCGCTCCTCT...ATGCTCACCGTGTCCAGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp GGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCCTAGCTCTTGAACAATaGGCACCTGGCGCGACAGTG +
Preference number: 4 (lower is better)
Translates to: GRGPKAGRPHSLGQLATSLALEQ*APGATV
Trigger: CACTGTCGCGCCAGGTGCTCATTGTTCAAGAGCTAG...GCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp AGCTGGTGGCACCACTGTGGCTGGCTGGACACGGTGAGCATGTTGGGACAGTGGAGCTGCAGCAGCTTGTaGAGGAAGGCAGGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: SWWHHCGWLDTVSMLGQWSCSSL*RKAGGW
Trigger: CCAGCCGCCTGCCTTCCTGCACAAGCTGCTGCAGCT...CCACTGTCCCAACATGCTCACCGTGTCCAGCCAGCCACAGTGGTGCCACCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp AAGTGCACAGACAGGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCGGGGTCAAAAGCAGGTaGAGGGATCCCAGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: KCTDRAEAPKPGGPTLSAGVKSR*RDPSCP
Trigger: AGGACAACTGGGATCCCTGCACCTGCTTTTGACCCC...GGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCCTGTCTGTGCACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp CAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGATGATGGGGCCTGGATaGAGCTGTGTCACGATGGGC +
Preference number: 4 (lower is better)
Translates to: QSREAPLSRPVGNKQAGQMMGPG*SCVTMG
Trigger: GCCCATCGTGACACAGCTGCATCCAGGCCCCATCAT...CTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp CACAGACAGGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGCTGGTGGGAGCCACATaGAGTGCCTTGATGGTAAGC +
Preference number: 4 (lower is better)
Translates to: HRQGRGPKAGRPHSLGQLLVGAT*SALMVS
Trigger: GCTTACCATCAAGGCACTGCATGTGGCTCCCACCAG...CAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCCTGTCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp CTGGCTGGACACGGTGAGCATGTTGGGACAGTGGGTGGATCTTGGGTGCCTGCAAGCTGCACAACCGAGTaGATGGGGCCCACGCCTCCC +
Preference number: 4 (lower is better)
Translates to: LAGHGEHVGTVGGSWVPASCTTE*MGPTPP
Trigger: GGGAGGCGTGGGCCCCATGCACTCGGTTGTGCAGCT...TGCAGGCACCCAAGATCCACCCACTGTCCCAACATGCTCACCGTGTCCAGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp GCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGCAGGTGGGGCCTGGCTaGGGTCCCGCACTGCTTCGT +
Preference number: 4 (lower is better)
Translates to: AVGHSNQENRELVAPLWLQVGPG*GPALLR
Trigger: ACGAAGCAGTGCGGGACCCCAGCCAGGCCCCACCTG...CAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp TGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCCAGGTGGGGCCTGGCTaGGGTCCCGCACTGCTTCGT +
Preference number: 4 (lower is better)
Translates to: CGSQQSGKQGAGGTTVAGQVGPG*GPALLR
Trigger: ACGAAGCAGTGCGGGACCCCAGCCAGGCCCCACCTG...GCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CGTGAGACACGGAGAGACACTTGGCTGAGTGGGGTCCATGGGTCCAAAAGCCTCTCCACAGGTGGGGCCTaGCTGGGGTCCCGCACTGCT +
Preference number: 4 (lower is better)
Translates to: RETRRDTWLSGVHGSKSLSTGGA*LGSRTA
Trigger: AGCAGTGCGGGACCCCAGCCAGGCCCCACCTGTGGA...GAGGCTTTTGGACCCATGGACCCCACTCAGCCAAGTGTCTCTCCGTGTCTCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp AAGTGCACAGACAGGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCCTGATACCTCCAACTTaGGGCCTGGAAAGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: KCTDRAEAPKPGGPTLSALIPPT*GLERPR
Trigger: ACGAGGCCTTTCCAGGCCCCAAGTTGGAGGTATCAG...GGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCCTGTCTGTGCACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp GGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCGTCCTCAGCACCCAGTaGACGGCTCTTGTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: GRGPKAGRPHSLGQLATSVLSTQ*TALVQL
Trigger: AAGCTGAACAAGAGCCGTCCACTGGGTGCTGAGGAC...GCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CACAGACAGGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGCCCGCCTGCAGCTGCTaGTTCAGATCTTGCTCAATG +
Preference number: 4 (lower is better)
Translates to: HRQGRGPKAGRPHSLGQLPACSC*FRSCSM
Trigger: CATTGAGCAAGATCTGAACCAGCAGCTGCAGGCGGG...CAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCCTGTCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp AGCTGGTGGCACCACTGTGGCTGGCTGGACACGGTGAGCATGTTGGGACAGTGGGCTCTGTGGCAGCCCTaGGCCATAGGCACTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SWWHHCGWLDTVSMLGQWALWQP*AIGTPA
Trigger: TGCTGGAGTGCCTATGGCCCAGGGCTGCCACAGAGC...CCACTGTCCCAACATGCTCACCGTGTCCAGCCAGCCACAGTGGTGCCACCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CCTCCCCGTGAGACACGGAGAGACACTTGGCTGAGTGGGGTCCATGGGTCCAAATGTGTGTGGCGCAGATaGGCGCAGGGTCGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PPRETRRDTWLSGVHGSKCVWRR*AQGRAE
Trigger: CTCAGCCCGACCCTGCGCCCATCTGCGCCACACACA...TTTGGACCCATGGACCCCACTCAGCCAAGTGTCTCTCCGTGTCTCACGGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CTGGCTGGACACGGTGAGCATGTTGGGACAGTGGGTGGATCTTGGGTGCCTGCAAGCGTAGCCTCAGGGTaGCCCGGGGTGCTGAGAGAC +
Preference number: 4 (lower is better)
Translates to: LAGHGEHVGTVGGSWVPASVASG*PGVLRD
Trigger: GTCTCTCAGCACCCCGGGCCACCCTGAGGCTACGCT...TGCAGGCACCCAAGATCCACCCACTGTCCCAACATGCTCACCGTGTCCAGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CCTCCCCGTGAGACACGGAGAGACACTTGGCTGAGTGGGGTCCATGGGTCCAAACAGCTGCAGACAGCATaGGGGGACCCTGGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: PPRETRRDTWLSGVHGSKQLQTA*GDPGPC
Trigger: GCAAGGGCCAGGGTCCCCCCATGCTGTCTGCAGCTG...TTTGGACCCATGGACCCCACTCAGCCAAGTGTCTCTCCGTGTCTCACGGGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp GGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCGTGCACCACGTTGTTaGAGCAGCGCAGCTCAAACA +
Preference number: 4 (lower is better)
Translates to: GQRPQSREAPLSRPVGNKRAPRC*SSAAQT
Trigger: TGTTTGAGCTGCGCTGCTCCAACAACGTGGTGCACG...CTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp AAGTGCACAGACAGGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCCCCACTCCGTTCACCTaGGAACAGATAGACGGAGAC +
Preference number: 4 (lower is better)
Translates to: KCTDRAEAPKPGGPTLSAPTPFT*EQIDGD
Trigger: GTCTCCGTCTATCTGTTCCCAGGTGAACGGAGTGGG...GGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCCTGTCTGTGCACTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp TCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGGCCACGCTCGTCCAGCTCCTaGCCCAGGCCCCCAGCTATG +
Preference number: 4 (lower is better)
Translates to: SLGQLATSRLGRYPSQWPRSSSS*PRPPAM
Trigger: CATAGCTGGGGGCCTGGGCCAGGAGCTGGACGAGCG...TGGCCACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTGGACACGGTGAGCATCACCTGGCGCGACAGTaGTCGCTCGTCCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: QENRELVAPLWLAGHGEHHLARQ*SLVQLL
Trigger: CAGGAGCTGGACGAGCGACCACTGTCGCGCCAGGTG...ATGCTCACCGTGTCCAGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCCGCCACTTGAGAGCATaGTCCTTGTGCGCATCTGGA +
Preference number: 4 (lower is better)
Translates to: PKAGRPHSLGQLATSRLGRHLRA*SLCASG
Trigger: TCCAGATGCGCACAAGGACCATGCTCTCAAGTGGCG...GCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp CCTCCCCGTGAGACACGGAGAGACACTTGGCTGAGTGGGGTCCATGGGTCCAAAGGTGGCCCGGGGTGCTaGGAGACGAAACACTGTCTG +
Preference number: 4 (lower is better)
Translates to: PPRETRRDTWLSGVHGSKGGPGC*ETKHCL
Trigger: CAGACAGTGTTTCGTCTCTCAGCACCCCGGGCCACC...TTTGGACCCATGGACCCCACTCAGCCAAGTGTCTCTCCGTGTCTCACGGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp AGCTGGTGGCACCACTGTGGCTGGCTGGACACGGTGAGCATGTTGGGACAGTGGCCCACTGTTGAGCTCTaGGCGGAACTGGGGCTCACT +
Preference number: 4 (lower is better)
Translates to: SWWHHCGWLDTVSMLGQWPTVEL*AELGLT
Trigger: AGTGAGCCCCAGTTCCGCTCAGAGCTCAACAGTGGG...CCACTGTCCCAACATGCTCACCGTGTCCAGCCAGCCACAGTGGTGCCACCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp CAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGTGTGGGCACTGGGCATaGTCACATCCAGAGTACAGC +
Preference number: 4 (lower is better)
Translates to: QSREAPLSRPVGNKQAGQCGHWA*SHPEYS
Trigger: GCTGTACTCTGGATGTGATCATGCCCAGTGCCCACA...CTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp GGCCTAGCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGCCAGCTCCCCGTGAGTaGCATCCAGCCGCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: GLAVGHSNQENRELVAPLPAPRE*HPAASL
Trigger: CAGGGAAGCGGCTGGATGTCACTCACGGGGAGCTGG...CAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGCTAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp GGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGTCCTTGACATTCTTGTaGGGGTCCAGGTGGATACGG +
Preference number: 4 (lower is better)
Translates to: GQRPQSREAPLSRPVGNKSLTFL*GSRWIR
Trigger: CCGTATCCACCTGGACCCTCACAAGAATGTCAAGGA...CTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp CCACATGGCATCTATCCCCCACCTCCCCGTGAGACACGGAGAGACACTTGGCTGGGTACTGGAGCAGGTTaGCCAGCAGGGCGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: PHGIYPPPPRETRRDTWLGTGAG*PAGRRS
Trigger: ACTCCTGCGCCCTGCTGGTCAACCTGCTCCAGTACC...CAGCCAAGTGTCTCTCCGTGTCTCACGGGGAGGTGGGGGATAGATGCCATGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp CCTTCACAGTGGCCATCCTTTGAAGGACCTGGTGGCCTAGCTGTGGGTCACAGCAAGTGGGCCACCCGATaGCTGGGCCAGCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: PSQWPSFEGPGGLAVGHSKWATR*LGQLLQ
Trigger: CTGCAGGAGCTGGCCCAGTCATCGGGTGGCCCACTT...GCTGTGACCCACAGCTAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp GGCCTGGGCTGGCGGTGGGCAAGTTTATTCCACTTCATGCAGACACTGACCCACGAGACGGGAGAGGCCTaGGGAAGTGGGCCACCCGAT +
Preference number: 4 (lower is better)
Translates to: GLGWRWASLFHFMQTLTHETGEA*GSGPPD
Trigger: ATCGGGTGGCCCACTTCCTCAGGCCTCTCCCGTCTC...GTGGGTCAGTGTCTGCATGAAGTGGAATAAACTTGCCCACCGCCAGCCCAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS-3UTR TCA 90 bp GGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCTTAGAACCCAAGGTATaGGAAGAGGCCCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: GRGPKAGRPHSLGQLATSLEPKV*EEAPGG
Trigger: TCCTCCTGGGGCCTCTTCTCATACCTTGGGTTCTAA...GCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp TGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTGAGAGGAGCGGGAAGGTaGGACCCTGGGGCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: WVTAIRKTGSWWHHCGWLRGAGR*DPGACE
Trigger: CTCACAGGCCCCAGGGTCTCACCTTCCCGCTCCTCT...CAGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp CAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGCTAGCTCTTGAACAATaGGCACCTGGCGCGACAGTG +
Preference number: 4 (lower is better)
Translates to: QSREAPLSRPVGNKQAGQLALEQ*APGATV
Trigger: CACTGTCGCGCCAGGTGCTCATTGTTCAAGAGCTAG...CTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp CCTTCACAGTGGCCATCCTTTGAAGGACCTGGTGGCCTAGCTGTGGGTCACAGCTGGCTGTGGTGGGTCTaGCTGGGAGGGCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: PSQWPSFEGPGGLAVGHSWLWWV*LGGQLL
Trigger: GAGGAGCTGCCCTCCCAGGCAGACCCACCACAGCCA...GCTGTGACCCACAGCTAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp TGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCAGCTCCAGTCGCAGCTaGTCAGCCCGCACAGCCTGG +
Preference number: 4 (lower is better)
Translates to: CGSQQSGKQGAGGTTVAGSSSRS*SARTAW
Trigger: CCAGGCTGTGCGGGCTGAGCAGCTGCGACTGGAGCT...GCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp TCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGGCCAAGCTCCAGTCGCAGCTaGTCAGCCCGCACAGCCTGG +
Preference number: 4 (lower is better)
Translates to: SLGQLATSRLGRYPSQWPSSSRS*SARTAW
Trigger: CCAGGCTGTGCGGGCTGAGCAGCTGCGACTGGAGCT...TGGCCACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp CCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCCAGGGGCGTCAAGGATaGAGAACTCATCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: PKAGRPHSLGQLATSRLGQGRQG*RTHHCP
Trigger: TGGACAGTGATGAGTTCTGCATCCTTGACGCCCCTG...GCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp TCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGGCCACGCGCAGCAGGTCAGTaGTTCCCAGGGGCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: SLGQLATSRLGRYPSQWPRAAGQ*FPGAGR
Trigger: TCTCCCAGCCCCTGGGAAGCACTGACCTGCTGCGCG...TGGCCACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp CCACATGGCATCTATCCCCCACCTCCCCGTGAGACACGGAGAGACACTTGGCTGTCTGTGTCCTCAGACTaGCCTTCCTGGGGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: PHGIYPPPPRETRRDTWLSVSSD*PSWGLP
Trigger: CGGCAGCCCCCAGGAAGGGCAGTCTGAGGACACAGA...CAGCCAAGTGTCTCTCCGTGTCTCACGGGGAGGTGGGGGATAGATGCCATGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp TCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGGCCAAGCTGCACAACCGAGTaGATGGGGCCCACGCCTCCC +
Preference number: 4 (lower is better)
Translates to: SLGQLATSRLGRYPSQWPSCTTE*MGPTPP
Trigger: GGGAGGCGTGGGCCCCATGCACTCGGTTGTGCAGCT...TGGCCACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp TCACAGTGGCCATCCTTTGAAGGACCTGGTGGCCTAGCTGTGGGTCACAGCAATGAGGCAGCCCCACGCTaGAGCCCCCGAATGAGGCGC +
Preference number: 4 (lower is better)
Translates to: SQWPSFEGPGGLAVGHSNEAAPR*SPRMRR
Trigger: GCGCCTCATTCGGGGGCTGCAGCGTGGGGCTGCCTC...ATTGCTGTGACCCACAGCTAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp AGACAGGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAAGAGCATGGTCCTTGTaGGCATCTGGAAGGATCTGG +
Preference number: 4 (lower is better)
Translates to: RQGRGPKAGRPHSLGQLARAWSL*ASGRIW
Trigger: CCAGATCCTTCCAGATGCGCACAAGGACCATGCTCT...TGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGCCAGCTGCAAGCTTGTaGTCATGCATGAGGCCCAAC +
Preference number: 4 (lower is better)
Translates to: QSREAPLSRPVGNKQAGQPAASL*SCMRPN
Trigger: GTTGGGCCTCATGCATGACCACAAGCTTGCAGCTGG...CTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS-3UTR CCA 90 bp CCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGAGGAAGGCAGGCGGCTaGTGCACGTCCACAGGTGGG +
Preference number: 4 (lower is better)
Translates to: PLSRPVGNKQAGQVSFTVRKAGG*CTSTGG
Trigger: CCCACCTGTGGACGTGCACCAGCCGCCTGCCTTCCT...CACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp GCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGAGGAAGGCAGGCGGCTaGTGCACGTCCACAGGTGGG +
Preference number: 4 (lower is better)
Translates to: AVGHSNQENRELVAPLWLRKAGG*CTSTGG
Trigger: CCCACCTGTGGACGTGCACCAGCCGCCTGCCTTCCT...CAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGCAGAGGTGGCTGTGGTaGGTCTGCCTGGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: PLSRPVGNKQAGQVSFTVQRWLW*VCLGGQ
Trigger: CTGCCCTCCCAGGCAGACCCACCACAGCCACCTCTG...CACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CTGGCTGGACACGGTGAGCATGTTGGGACAGTGGGTGGATCTTGGGTGCCTGCATTGCAGAGGTGGCTGTaGTGGGTCTGCCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: LAGHGEHVGTVGGSWVPALQRWL*WVCLGG
Trigger: CCCTCCCAGGCAGACCCACCACAGCCACCTCTGCAA...TGCAGGCACCCAAGATCCACCCACTGTCCCAACATGCTCACCGTGTCCAGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp AGCTGGTGGCACCACTGTGGCTGGCTGGACACGGTGAGCATGTTGGGACAGTGGGCCGATTTGCAGAGGTaGCTGTGGTGGGTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: SWWHHCGWLDTVSMLGQWADLQR*LWWVCL
Trigger: CAGGCAGACCCACCACAGCCACCTCTGCAAATCGGC...CCACTGTCCCAACATGCTCACCGTGTCCAGCCAGCCACAGTGGTGCCACCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGCTGATACCTCCAACTTaGGGCCTGGAAAGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: QSREAPLSRPVGNKQAGQLIPPT*GLERPR
Trigger: ACGAGGCCTTTCCAGGCCCCAAGTTGGAGGTATCAG...CTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp GGCCTAGCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGGACAATGGCAGGCAGTaGAGCGCCGGGACCGGCTCT +
Preference number: 4 (lower is better)
Translates to: GLAVGHSNQENRELVAPLDNGRQ*SAGTGS
Trigger: AGAGCCGGTCCCGGCGCTCCACTGCCTGCCATTGTC...CAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGCTAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CCTTCACAGTGGCCATCCTTTGAAGGACCTGGTGGCCTAGCTGTGGGTCACAGCGACAATGGCAGGCAGTaGAGCGCCGGGACCGGCTCT +
Preference number: 4 (lower is better)
Translates to: PSQWPSFEGPGGLAVGHSDNGRQ*SAGTGS
Trigger: AGAGCCGGTCCCGGCGCTCCACTGCCTGCCATTGTC...GCTGTGACCCACAGCTAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGAGCTCCACATCAGATTaGAAGTCGGCCAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: QSREAPLSRPVGNKQAGQSSTSD*KSARSR
Trigger: CCTGGACCTGGCCGACTTCCAATCTGATGTGGAGCT...CTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp GGCCTAGCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGAGCGTAGCCTCAGGGTaGCCCGGGGTGCTGAGAGAC +
Preference number: 4 (lower is better)
Translates to: GLAVGHSNQENRELVAPLSVASG*PGVLRD
Trigger: GTCTCTCAGCACCCCGGGCCACCCTGAGGCTACGCT...CAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGCTAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCTGGCCTCAGTGCTCCTaGGATTCAGAGCTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: PKAGRPHSLGQLATSRLGWPQCS*DSELWR
Trigger: TCTCCAAAGCTCTGAATCCCAGGAGCACTGAGGCCA...GCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp GGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGGCCAGTGTCCGGCTCTaGAATGTCCTCATCTCTTCA +
Preference number: 4 (lower is better)
Translates to: GQRPQSREAPLSRPVGNKASVRL*NVLISS
Trigger: TGAAGAGATGAGGACATTCCAGAGCCGGACACTGGC...CTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CCTCCCCGTGAGACACGGAGAGACACTTGGCTGAGTGGGGTCCATGGGTCCAAAGCCGAGCAGCAGCGCTaGATGTGGGAAGCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: PPRETRRDTWLSGVHGSKAEQQR*MWEAGL
Trigger: CAGACCTGCTTCCCACATCCAGCGCTGCTGCTCGGC...TTTGGACCCATGGACCCCACTCAGCCAAGTGTCTCTCCGTGTCTCACGGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp GCACCACTGTGGCTGGCTGGACACGGTGAGCATGTTGGGACAGTGGGTGGATCTACGACGGGAAGGTTCTaGGGCAGGTGTCTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: APLWLAGHGEHVGTVGGSTTGRF*GRCLGD
Trigger: GTCCCCCAGACACCTGCCCCAGAACCTTCCCGTCGT...AGATCCACCCACTGTCCCAACATGCTCACCGTGTCCAGCCAGCCACAGTGGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CACAGACAGGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCACTGTCACCAGTGTaGAGAAGGTACTCTGGGACT +
Preference number: 4 (lower is better)
Translates to: HRQGRGPKAGRPHSLGQLALSPV*RRYSGT
Trigger: AGTCCCAGAGTACCTTCTCCACACTGGTGACAGTGC...CAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCCTGTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp AGACAGGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCATCAGTCAGGTCTCGTTaGTTGATGAGGGCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: RQGRGPKAGRPHSLGQLASVRSR*LMRAVS
Trigger: GGAGACAGCCCTCATCAACCAACGAGACCTGACTGA...TGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp GCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGGAGGCAAAGGGGCCTaGGCCCCACTCCGTTCACCT +
Preference number: 4 (lower is better)
Translates to: AVGHSNQENRELVAPLWLGGKGA*APLRSP
Trigger: AGGTGAACGGAGTGGGGCCCAGGCCCCTTTGCCTCC...CAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp GTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTGGAGGCAAAGGGGCCTaGGCCCCACTCCGTTCACCT +
Preference number: 4 (lower is better)
Translates to: VGHSNQENRELVAPLWLAGGKGA*APLRSP
Trigger: AGGTGAACGGAGTGGGGCCCAGGCCCCTTTGCCTCC...AGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGCACGATGATGGGGCCTaGATGCAGCTGTGTCACGAT +
Preference number: 4 (lower is better)
Translates to: QSREAPLSRPVGNKQAGQHDDGA*MQLCHD
Trigger: ATCGTGACACAGCTGCATCCAGGCCCCATCATCGTG...CTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp TGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTGCACCTGGCGCGACAGTaGTCGCTCGTCCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: WVTAIRKTGSWWHHCGWLHLARQ*SLVQLL
Trigger: CAGGAGCTGGACGAGCGACCACTGTCGCGCCAGGTG...CAGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp GCACCACTGTGGCTGGCTGGACACGGTGAGCATGTTGGGACAGTGGGTGGATCTCTCCGACGCTGCTGGTaGGAGCCACATGCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: APLWLAGHGEHVGTVGGSLRRCW*EPHAVP
Trigger: AGGCACTGCATGTGGCTCCCACCAGCAGCGTCGGAG...AGATCCACCCACTGTCCCAACATGCTCACCGTGTCCAGCCAGCCACAGTGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CCTTCACAGTGGCCATCCTTTGAAGGACCTGGTGGCCTAGCTGTGGGTCACAGCGCACAACCGAGTGCATaGGGCCCACGCCTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: PSQWPSFEGPGGLAVGHSAQPSA*GPRLPA
Trigger: TGCTGGGAGGCGTGGGCCCCATGCACTCGGTTGTGC...GCTGTGACCCACAGCTAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp AAGTGCACAGACAGGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCGAAAGCTGTACCTTCTaGCCAGCGATCTCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: KCTDRAEAPKPGGPTLSAESCTF*PAISVG
Trigger: CCCTACAGAGATCGCTGGCCAGAAGGTACAGCTTTC...GGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCCTGTCTGTGCACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp TGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTCTGGAAGCGTGGCCTaGGATGGGAGAAGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: CGSQQSGKQGAGGTTVAGSGSVA*DGRSPG
Trigger: CCCGGGACTTCTCCCATCTCAGGCCACGCTTCCAGA...GCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp GCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGTCTGGAAGCGTGGCCTaGGATGGGAGAAGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: AVGHSNQENRELVAPLWLSGSVA*DGRSPG
Trigger: CCCGGGACTTCTCCCATCTCAGGCCACGCTTCCAGA...CAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp TCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGGCCAGGTGGCCCGGGGTGCTaGGAGACGAAACACTGTCTG +
Preference number: 4 (lower is better)
Translates to: SLGQLATSRLGRYPSQWPGGPGC*ETKHCL
Trigger: CAGACAGTGTTTCGTCTCTCAGCACCCCGGGCCACC...TGGCCACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp AGCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTCCAGCTCCCCGTGAGTaGCATCCAGCCGCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: SCGSQQSGKQGAGGTTVAPAPRE*HPAASL
Trigger: CAGGGAAGCGGCTGGATGTCACTCACGGGGAGCTGG...AGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp CGTGAGACACGGAGAGACACTTGGCTGAGTGGGGTCCATGGGTCCAAAAGCCTCGCTGCAGCCCCCGAATaGGGCGCCCATCTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: RETRRDTWLSGVHGSKSLAAAPE*GAHLSC
Trigger: ACAGGAAAGATGGGCGCCTCATTCGGGGGCTGCAGC...GAGGCTTTTGGACCCATGGACCCCACTCAGCCAAGTGTCTCTCCGTGTCTCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp GGCCTAGCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGCCCGCAGGGCAACGCTaGCCTTGTACAGATCCAGGC +
Preference number: 4 (lower is better)
Translates to: GLAVGHSNQENRELVAPLPAGQR*PCTDPG
Trigger: GCCTGGATCTGTACAAGGGCAGCGTTGCCCTGCGGG...CAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGCTAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS-3UTR GCA 90 bp CCTCCCCGTGAGACACGGAGAGACACTTGGCTGAGTGGGGTCCATGGGTCCAAACTTGTCGGCCAGGCCTaGAGGGTCTGCAAGGTTGAC +
Preference number: 4 (lower is better)
Translates to: PPRETRRDTWLSGVHGSKLVGQA*RVCKVD
Trigger: GTCAACCTTGCAGACCCTGCAGGCCTGGCCGACAAG...TTTGGACCCATGGACCCCACTCAGCCAAGTGTCTCTCCGTGTCTCACGGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp AGGCTGGGCAGGTATCCTTCACAGTGGCCATCCTTTGAAGGACCTGGTGGCCTACGCGCAGCAGGTCAGTaGTTCCCAGGGGCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: RLGRYPSQWPSFEGPGGLRAAGQ*FPGAGR
Trigger: TCTCCCAGCCCCTGGGAAGCACTGACCTGCTGCGCG...TAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGAAGGATACCTGCCCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp CACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTGGACACACACCCAGGAGCCCATaGCGGCAGCAGAGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: HSNQENRELVAPLWLAGHTPRSP*RQQSLL
Trigger: CAAGAGGCTCTGCTGCCGGCATGGGCTCCTGGGTGT...GTGTCCAGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp AGGCTGGGCAGGTATCCTTCACAGTGGCCATCCTTTGAAGGACCTGGTGGCCTACAGAGGTGGCTGTGGTaGGTCTGCCTGGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: RLGRYPSQWPSFEGPGGLQRWLW*VCLGGQ
Trigger: CTGCCCTCCCAGGCAGACCCACCACAGCCACCTCTG...TAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGAAGGATACCTGCCCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CCTTCACAGTGGCCATCCTTTGAAGGACCTGGTGGCCTAGCTGTGGGTCACAGCTTGCAGAGGTGGCTGTaGTGGGTCTGCCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: PSQWPSFEGPGGLAVGHSLQRWL*WVCLGG
Trigger: CCCTCCCAGGCAGACCCACCACAGCCACCTCTGCAA...GCTGTGACCCACAGCTAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp GGCCTAGCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGATCTTGCCACCCGAGTaGGGTGGGGTTGAGGGTCGG +
Preference number: 4 (lower is better)
Translates to: GLAVGHSNQENRELVAPLILPPE*GGVEGR
Trigger: CCGACCCTCAACCCCACCCCACTCGGGTGGCAAGAT...CAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGCTAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CCTCCCCGTGAGACACGGAGAGACACTTGGCTGAGTGGGGTCCATGGGTCCAAAGGCCCTCTGGAAGCGTaGCCTGAGATGGGAGAAGTC +
Preference number: 4 (lower is better)
Translates to: PPRETRRDTWLSGVHGSKGPLEA*PEMGEV
Trigger: GACTTCTCCCATCTCAGGCCACGCTTCCAGAGGGCC...TTTGGACCCATGGACCCCACTCAGCCAAGTGTCTCTCCGTGTCTCACGGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTGGACACGGTGAGCATTGTACTCTGGCTCTGTaGCAGCCCTGGGCCATAGGC +
Preference number: 4 (lower is better)
Translates to: QENRELVAPLWLAGHGEHCTLAL*QPWAIG
Trigger: GCCTATGGCCCAGGGCTGCCACAGAGCCAGAGTACA...ATGCTCACCGTGTCCAGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTGGACACGGTGAGCATGATCTCCGTGTACTCTaGCTCTGTGGCAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: QENRELVAPLWLAGHGEHDLRVL*LCGSPG
Trigger: CCCAGGGCTGCCACAGAGCCAGAGTACACGGAGATC...ATGCTCACCGTGTCCAGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp GGCCTGGGCTGGCGGTGGGCAAGTTTATTCCACTTCATGCAGACACTGACCCACGCCGAGCAGCAGCGCTaGATGTGGGAAGCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: GLGWRWASLFHFMQTLTHAEQQR*MWEAGL
Trigger: CAGACCTGCTTCCCACATCCAGCGCTGCTGCTCGGC...GTGGGTCAGTGTCTGCATGAAGTGGAATAAACTTGCCCACCGCCAGCCCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS-3UTR CCA 90 bp GGCCTAGCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGACGACGGGAAGGTTCTaGGGCAGGTGTCTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: GLAVGHSNQENRELVAPLTTGRF*GRCLGD
Trigger: GTCCCCCAGACACCTGCCCCAGAACCTTCCCGTCGT...CAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGCTAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp AAGTGCACAGACAGGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCCTCGATGGTAGAGTTTaGCCTTTTCAGCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: KCTDRAEAPKPGGPTLSALDGRV*PFQLPG
Trigger: GCCTGGAAGCTGAAAAGGCCAAACTCTACCATCGAG...GGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCCTGTCTGTGCACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CACAGACAGGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGCTCGATGGTAGAGTTTaGCCTTTTCAGCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: HRQGRGPKAGRPHSLGQLLDGRV*PFQLPG
Trigger: GCCTGGAAGCTGAAAAGGCCAAACTCTACCATCGAG...CAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCCTGTCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp AGCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGCAGCTGTGTCACGATaGGCTCCCCGTCTCGAGGCG +
Preference number: 4 (lower is better)
Translates to: SCGSQQSGKQGAGGTTVAAAVSR*APRLEA
Trigger: CGCCTCGAGACGGGGAGCCCATCGTGACACAGCTGC...AGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp TCACAGTGGCCATCCTTTGAAGGACCTGGTGGCCTAGCTGTGGGTCACAGCAATCGCTCGTCCAGCTCCTaGCCCAGGCCCCCAGCTATG +
Preference number: 4 (lower is better)
Translates to: SQWPSFEGPGGLAVGHSNRSSSS*PRPPAM
Trigger: CATAGCTGGGGGCCTGGGCCAGGAGCTGGACGAGCG...ATTGCTGTGACCCACAGCTAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp TGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCCTCCGACGCTGCTGGTaGGAGCCACATGCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: CGSQQSGKQGAGGTTVAGLRRCW*EPHAVP
Trigger: AGGCACTGCATGTGGCTCCCACCAGCAGCGTCGGAG...GCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp CCTCCCCGTGAGACACGGAGAGACACTTGGCTGAGTGGGGTCCATGGGTCCAAAGGTCATCTTCACCAGTaGGTCAGGGCGTGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: PPRETRRDTWLSGVHGSKGHLHQ*VRACGV
Trigger: GACACCACACGCCCTGACTCACTGGTGAAGATGACC...TTTGGACCCATGGACCCCACTCAGCCAAGTGTCTCTCCGTGTCTCACGGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp CCTTCACAGTGGCCATCCTTTGAAGGACCTGGTGGCCTAGCTGTGGGTCACAGCGCTTCGGAGCCAGAGTaGCTGGGGAAGCTCAGGATC +
Preference number: 4 (lower is better)
Translates to: PSQWPSFEGPGGLAVGHSASEPE*LGKLRI
Trigger: GATCCTGAGCTTCCCCAGTCACTCTGGCTCCGAAGC...GCTGTGACCCACAGCTAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp GTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTGCTTCGGAGCCAGAGTaGCTGGGGAAGCTCAGGATC +
Preference number: 4 (lower is better)
Translates to: VGHSNQENRELVAPLWLAASEPE*LGKLRI
Trigger: GATCCTGAGCTTCCCCAGTCACTCTGGCTCCGAAGC...AGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp TGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTGCCCACTGTTGAGCTCTaGGCGGAACTGGGGCTCACT +
Preference number: 4 (lower is better)
Translates to: WVTAIRKTGSWWHHCGWLPTVEL*AELGLT
Trigger: AGTGAGCCCCAGTTCCGCTCAGAGCTCAACAGTGGG...CAGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp AAGTGCACAGACAGGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAATCCGAGTCTAGCTTaGAGGCTGACTTGCACATCT +
Preference number: 4 (lower is better)
Translates to: KCTDRAEAPKPGGPTLSANPSLA*RLTCTS
Trigger: AGATGTGCAAGTCAGCCTTCAAGCTAGACTCGGATT...GGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCCTGTCTGTGCACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp CCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGCCTCACAGAGCGCAGTaGTCCGACCCTTCAGCACTG +
Preference number: 4 (lower is better)
Translates to: PLSRPVGNKQAGQVSFTVPHRAQ*SDPSAL
Trigger: CAGTGCTGAAGGGTCGGATCACTGCGCTCTGTGAGG...CACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp AGGCTGGGCAGGTATCCTTCACAGTGGCCATCCTTTGAAGGACCTGGTGGCCTAGGTACTGGAGCAGGTTaGCCAGCAGGGCGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: RLGRYPSQWPSFEGPGGLGTGAG*PAGRRS
Trigger: ACTCCTGCGCCCTGCTGGTCAACCTGCTCCAGTACC...TAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGAAGGATACCTGCCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp CCTTCACAGTGGCCATCCTTTGAAGGACCTGGTGGCCTAGCTGTGGGTCACAGCGCTGGGGTCCCGCACTaGTTCGTCACAGTACTCCAG +
Preference number: 4 (lower is better)
Translates to: PSQWPSFEGPGGLAVGHSAGVPH*FVTVLQ
Trigger: CTGGAGTACTGTGACGAAGCAGTGCGGGACCCCAGC...GCTGTGACCCACAGCTAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS-3UTR GCA 90 bp AGGCTGGGCAGGTATCCTTCACAGTGGCCATCCTTTGAAGGACCTGGTGGCCTAAGCTGCAGCAGCTTGTaGAGGAAGGCAGGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: RLGRYPSQWPSFEGPGGLSCSSL*RKAGGW
Trigger: CCAGCCGCCTGCCTTCCTGCACAAGCTGCTGCAGCT...TAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGAAGGATACCTGCCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp TGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTGGTGCAGCTGCCGATTTaGAGAGGTGGCTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: WVTAIRKTGSWWHHCGWLVQLPI*RGGCGG
Trigger: CCCACCACAGCCACCTCTGCAAATCGGCAGCTGCAC...CAGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp GCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGCGTACCCCGTGCAGCTaGCGATTTGCAGAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: AVGHSNQENRELVAPLWLRTPCS*RFAEVA
Trigger: AGCCACCTCTGCAAATCGGCAGCTGCACGGGGTACG...CAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp CCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCTGCTGGTTCAGATCTTaGTCAATGAGCCACAAGTCC +
Preference number: 4 (lower is better)
Translates to: PKAGRPHSLGQLATSRLGCWFRS*SMSHKS
Trigger: GGACTTGTGGCTCATTGAGCAAGATCTGAACCAGCA...GCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp CACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTGGACACGGCGAGGGCTCAGGTTaGTGTAGCTCACACGGACTC +
Preference number: 4 (lower is better)
Translates to: HSNQENRELVAPLWLAGHGEGSG*CSSHGL
Trigger: GAGTCCGTGTGAGCTACAGCAACCTGAGCCCTCGCC...GTGTCCAGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp CACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTGGACACTCCAGGAGCTGGGAGTaGCAGCTCTGTTCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: HSNQENRELVAPLWLAGHSRSWE*QLCSGG
Trigger: CCCACCTGAACAGAGCTGGCACTCCCAGCTCCTGGA...GTGTCCAGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp TGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCCCTGTCAGTCCCTTCTaGTCATGGCCCCTGGATGCC +
Preference number: 4 (lower is better)
Translates to: CGSQQSGKQGAGGTTVAGPVSPF*SWPLDA
Trigger: GGCATCCAGGGGCCATGAGCAGAAGGGACTGACAGG...GCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp GGCCTAGCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGCCTGTCAGTCCCTTCTaGTCATGGCCCCTGGATGCC +
Preference number: 4 (lower is better)
Translates to: GLAVGHSNQENRELVAPLPVSPF*SWPLDA
Trigger: GGCATCCAGGGGCCATGAGCAGAAGGGACTGACAGG...CAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGCTAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp GCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGTGTGGTGGGTCTGCCTaGGAGGGCAGCTCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: AVGHSNQENRELVAPLWLCGGSA*EGSSSK
Trigger: CTTTGAGGAGCTGCCCTCCCAGGCAGACCCACCACA...CAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTGGACACTGTGGTGGGTCTGCCTaGGAGGGCAGCTCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: HSNQENRELVAPLWLAGHCGGSA*EGSSSK
Trigger: CTTTGAGGAGCTGCCCTCCCAGGCAGACCCACCACA...GTGTCCAGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CGTGAGACACGGAGAGACACTTGGCTGAGTGGGGTCCATGGGTCCAAAAGCCTCGCCGATTTGCAGAGGTaGCTGTGGTGGGTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: RETRRDTWLSGVHGSKSLADLQR*LWWVCL
Trigger: CAGGCAGACCCACCACAGCCACCTCTGCAAATCGGC...GAGGCTTTTGGACCCATGGACCCCACTCAGCCAAGTGTCTCTCCGTGTCTCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTGGACACTGTACTCTGGCTCTGTaGCAGCCCTGGGCCATAGGC +
Preference number: 4 (lower is better)
Translates to: HSNQENRELVAPLWLAGHCTLAL*QPWAIG
Trigger: GCCTATGGCCCAGGGCTGCCACAGAGCCAGAGTACA...GTGTCCAGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp TGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCGATCTCCGTGTACTCTaGCTCTGTGGCAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: CGSQQSGKQGAGGTTVAGDLRVL*LCGSPG
Trigger: CCCAGGGCTGCCACAGAGCCAGAGTACACGGAGATC...GCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp GGACGTGGCCTGGGCTGGCGGTGGGCAAGTTTATTCCACTTCATGCAGACACTGCGAATGGTCTGTGTGTaGCGCAGATGGGCGCAGGGT +
Preference number: 4 (lower is better)
Translates to: GRGLGWRWASLFHFMQTLRMVCV*RRWAQG
Trigger: ACCCTGCGCCCATCTGCGCCACACACAGACCATTCG...CAGTGTCTGCATGAAGTGGAATAAACTTGCCCACCGCCAGCCCAGGCCACGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS-3UTR CCA 90 bp GGCCTAGCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGCGAATGGTCTGTGTGTaGCGCAGATGGGCGCAGGGT +
Preference number: 4 (lower is better)
Translates to: GLAVGHSNQENRELVAPLRMVCV*RRWAQG
Trigger: ACCCTGCGCCCATCTGCGCCACACACAGACCATTCG...CAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGCTAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CGTGAGACACGGAGAGACACTTGGCTGAGTGGGGTCCATGGGTCCAAAAGCCTCCCCACTGTGTGCCACTaGACTGGGGGTTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: RETRRDTWLSGVHGSKSLPTVCH*TGGSGS
Trigger: TGACCCTGAACCCCCAGTCCAGTGGCACACAGTGGG...GAGGCTTTTGGACCCATGGACCCCACTCAGCCAAGTGTCTCTCCGTGTCTCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CGTGAGACACGGAGAGACACTTGGCTGAGTGGGGTCCATGGGTCCAAAAGCCTCCGTACATGGTCCGCTTaGAGGAGAAGGGCGAGGGCT +
Preference number: 4 (lower is better)
Translates to: RETRRDTWLSGVHGSKSLRTWSA*RRRARA
Trigger: AGCCCTCGCCCTTCTCCTCCAAGCGGACCATGTACG...GAGGCTTTTGGACCCATGGACCCCACTCAGCCAAGTGTCTCTCCGTGTCTCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp GCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGTCTGGGGCAGGTGTCTaGGGGACACCTGATGCCATC +
Preference number: 4 (lower is better)
Translates to: AVGHSNQENRELVAPLWLSGAGV*GTPDAI
Trigger: GATGGCATCAGGTGTCCCCCAGACACCTGCCCCAGA...CAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CGTGAGACACGGAGAGACACTTGGCTGAGTGGGGTCCATGGGTCCAAAAGCCTCGAAGTAGCCAAGCCCTaGTTGGCCACGGTACTGGGC +
Preference number: 4 (lower is better)
Translates to: RETRRDTWLSGVHGSKSLEVAKP*LATVLG
Trigger: GCCCAGTACCGTGGCCAACCAGGGCTTGGCTACTTC...GAGGCTTTTGGACCCATGGACCCCACTCAGCCAAGTGTCTCTCCGTGTCTCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGGCCATCCTTTGAACTGGGCACTGGGAAGTaGGCAGGAGCGCGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QLATSRLGRYPSQWPSFELGTGK*AGARSR
Trigger: CCTGCTGCGCGCTCCTGCCCACTTCCCAGTGCCCAG...TTCAAAGGATGGCCACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp AGGCTGGGCAGGTATCCTTCACAGTGGCCATCCTTTGAAGGACCTGGTGGCCTAGTACCACACGGCTGCTaGGCACTGGGAAGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: RLGRYPSQWPSFEGPGGLVPHGC*ALGSGQ
Trigger: CTGCCCACTTCCCAGTGCCCAGCAGCCGTGTGGTAC...TAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGAAGGATACCTGCCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp TCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGGCCAGCCTGGAGCTTCCGGTaGGTTGCTGGCTGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: SLGQLATSRLGRYPSQWPAWSFR*VAGCLC
Trigger: ACAGAGACAGCCAGCAACCCACCGGAAGCTCCAGGC...TGGCCACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTGGACACGGTGAGCATTGGTCAGAGGAGCTGTaGCTACTGCCTGGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: QENRELVAPLWLAGHGEHWSEEL*LLPGAS
Trigger: GGAAGCTCCAGGCAGTAGCCACAGCTCCTCTGACCA...ATGCTCACCGTGTCCAGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp TGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTGAGCAGGCCGGGCAGCTaGTTCTTACGGATGTCCTGC +
Preference number: 4 (lower is better)
Translates to: WVTAIRKTGSWWHHCGWLSRPGS*FLRMSC
Trigger: GCAGGACATCCGTAAGAACCAGCTGCCCGGCCTGCT...CAGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp GCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGTCTCAGCTGTAGCCTaGATGGCCTGGACCAGCCTG +
Preference number: 4 (lower is better)
Translates to: AVGHSNQENRELVAPLWLVSAVA*MAWTSL
Trigger: CAGGCTGGTCCAGGCCATCCAGGCTACAGCTGAGAC...CAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp CGTGAGACACGGAGAGACACTTGGCTGAGTGGGGTCCATGGGTCCAAAAGCCTCGACCAGGTTTCCAGGTaGATATCCCGCAGGGCAACG +
Preference number: 4 (lower is better)
Translates to: RETRRDTWLSGVHGSKSLDQVSR*ISRRAT
Trigger: CGTTGCCCTGCGGGATATTCACCTGGAAACCTGGTC...GAGGCTTTTGGACCCATGGACCCCACTCAGCCAAGTGTCTCTCCGTGTCTCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS-3UTR TCA 90 bp CAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTGGACACGGTGAGCATGGTAAGCTGAAGGCCTaGCACACACACAGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: QENRELVAPLWLAGHGEHGKLKA*HTHSAV
Trigger: CACTGCACTGTGTGTGTGTCAGGCCTTCAGCTTACC...ATGCTCACCGTGTCCAGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS-3UTR TCA 90 bp GGACGTGGCCTGGGCTGGCGGTGGGCAAGTTTATTCCACTTCATGCAGACACTGTCCCGAAGGCACTCTTaGGCCAGCTGCAAGCTTGTG +
Preference number: 4 (lower is better)
Translates to: GRGLGWRWASLFHFMQTLSRRHS*ASCKLV
Trigger: CACAAGCTTGCAGCTGGCTCAAGAGTGCCTTCGGGA...CAGTGTCTGCATGAAGTGGAATAAACTTGCCCACCGCCAGCCCAGGCCACGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS-3UTR TCA 90 bp GCACCACTGTGGCTGGCTGGACACGGTGAGCATGTTGGGACAGTGGGTGGATCTATGTCACACTGCTTGTaGGGCCGGCCATGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: APLWLAGHGEHVGTVGGSMSHCL*GRPWRR
Trigger: TCTTCTCCATGGCCGGCCTCACAAGCAGTGTGACAT...AGATCCACCCACTGTCCCAACATGCTCACCGTGTCCAGCCAGCCACAGTGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp CAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTGGACACGGTGAGCATAAGGCCATGTTGCTGTaGACAGAGGAGCCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: QENRELVAPLWLAGHGEHKAMLL*TEEPRS
Trigger: AGACCTGGGCTCCTCTGTTCACAGCAACATGGCCTT...ATGCTCACCGTGTCCAGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp CCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGGGTCATCTTCACCAGTaGGTCAGGGCGTGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: PLSRPVGNKQAGQVSFTVGHLHQ*VRACGV
Trigger: GACACCACACGCCCTGACTCACTGGTGAAGATGACC...CACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp GCACCACTGTGGCTGGCTGGACACGGTGAGCATGTTGGGACAGTGGGTGGATCTGTCCAGGGACAGTTCTaGGTGACAATGGCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: APLWLAGHGEHVGTVGGSVQGQF*VTMAGS
Trigger: ACTGCCTGCCATTGTCACTCAGAACTGTCCCTGGAC...AGATCCACCCACTGTCCCAACATGCTCACCGTGTCCAGCCAGCCACAGTGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp CCACATGGCATCTATCCCCCACCTCCCCGTGAGACACGGAGAGACACTTGGCTGAGGTGGACGTGTCCATaGCAATGTTGCTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: PHGIYPPPPRETRRDTWLRWTCP*QCCWRG
Trigger: CCCTCTCCAGCAACATTGTCATGGACACGTCCACCT...CAGCCAAGTGTCTCTCCGTGTCTCACGGGGAGGTGGGGGATAGATGCCATGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp CCTCCCCGTGAGACACGGAGAGACACTTGGCTGAGTGGGGTCCATGGGTCCAAACATCCTGGTCCACATTaGGCCTCAGAGGCATCATGG +
Preference number: 4 (lower is better)
Translates to: PPRETRRDTWLSGVHGSKHPGPH*ASEASW
Trigger: CCATGATGCCTCTGAGGCTCAATGTGGACCAGGATG...TTTGGACCCATGGACCCCACTCAGCCAAGTGTCTCTCCGTGTCTCACGGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp CAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTGGACACGGTGAGCATCATCCTGGTCCACATTaGGCCTCAGAGGCATCATGG +
Preference number: 4 (lower is better)
Translates to: QENRELVAPLWLAGHGEHHPGPH*ASEASW
Trigger: CCATGATGCCTCTGAGGCTCAATGTGGACCAGGATG...ATGCTCACCGTGTCCAGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp CGTGAGACACGGAGAGACACTTGGCTGAGTGGGGTCCATGGGTCCAAAAGCCTCCTTGAGCTTCAGCTCTaGGCAGTTGAGCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: RETRRDTWLSGVHGSKSLLELQL*AVELGQ
Trigger: CTGGCCCAGCTCAACTGCTCAGAGCTGAAGCTCAAG...GAGGCTTTTGGACCCATGGACCCCACTCAGCCAAGTGTCTCTCCGTGTCTCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp GGCCTAGCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGCAGACCCCACTCAGCTaGAGCAGCTTGTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GLAVGHSNQENRELVAPLQTPLS*SSLCRK
Trigger: CTTCCTGCACAAGCTGCTGCAGCTGAGTGGGGTCTG...CAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGCTAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp AGGCTGGGCAGGTATCCTTCACAGTGGCCATCCTTTGAAGGACCTGGTGGCCTACGTACCCCGTGCAGCTaGCGATTTGCAGAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: RLGRYPSQWPSFEGPGGLRTPCS*RFAEVA
Trigger: AGCCACCTCTGCAAATCGGCAGCTGCACGGGGTACG...TAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGAAGGATACCTGCCCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp CCTTCACAGTGGCCATCCTTTGAAGGACCTGGTGGCCTAGCTGTGGGTCACAGCGCACCCGCCTGCAGCTaGTGGTTCAGATCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: PSQWPSFEGPGGLAVGHSAPACS*WFRSCS
Trigger: TGAGCAAGATCTGAACCAGCAGCTGCAGGCGGGTGC...GCTGTGACCCACAGCTAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp CACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTGGACACAGCTCCCAGGACAGCTaGACGGCTGTGCCAGTTAAC +
Preference number: 4 (lower is better)
Translates to: HSNQENRELVAPLWLAGHSSQDS*TAVPVN
Trigger: GTTAACTGGCACAGCCGTGCAGCTGTCCTGGGAGCT...GTGTCCAGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp TGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCAGTACAGCGGGACAGTaGCAGTGTCCGGCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: CGSQQSGKQGAGGTTVAGSTAGQ*QCPALE
Trigger: TTCCAGAGCCGGACACTGGCACTGTCCCGCTGTACT...GCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp CCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGAGTACAGCGGGACAGTaGCAGTGTCCGGCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: PLSRPVGNKQAGQVSFTVSTAGQ*QCPALE
Trigger: TTCCAGAGCCGGACACTGGCACTGTCCCGCTGTACT...CACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp CAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGAGAAGAGATGTGTGTaGAGGACAGTGATGACGGTT +
Preference number: 4 (lower is better)
Translates to: QSREAPLSRPVGNKQAGQEKRCV*RTVMTV
Trigger: AACCGTCATCACTGTCCTGCACACACATCTCTTCTC...CTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp TCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGGCCAGAGCTTCCGGTGGGTTaGTGGCTGTCTCTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: SLGQLATSRLGRYPSQWPELPVG*WLSLCP
Trigger: AGGACACAGAGACAGCCAGCAACCCACCGGAAGCTC...TGGCCACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp GTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTGAGCTTCCGGTGGGTTaGTGGCTGTCTCTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: VGHSNQENRELVAPLWLAELPVG*WLSLCP
Trigger: AGGACACAGAGACAGCCAGCAACCCACCGGAAGCTC...AGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp CCACATGGCATCTATCCCCCACCTCCCCGTGAGACACGGAGAGACACTTGGCTGAACCCTTGGAAGAGCTaGACAACCGAGTGCATGGGG +
Preference number: 4 (lower is better)
Translates to: PHGIYPPPPRETRRDTWLNPWKS*TTECMG
Trigger: CCCCATGCACTCGGTTGTGCAGCTCTTCCAAGGGTT...CAGCCAAGTGTCTCTCCGTGTCTCACGGGGAGGTGGGGGATAGATGCCATGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp GGCCTGGGCTGGCGGTGGGCAAGTTTATTCCACTTCATGCAGACACTGACCCACCCTGGACCAGCCTGTTaGTCAGTTCCAGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GLGWRWASLFHFMQTLTHPGPAC*SVPEQQ
Trigger: CTGCTGCTCTGGAACTGAGCAACAGGCTGGTCCAGG...GTGGGTCAGTGTCTGCATGAAGTGGAATAAACTTGCCCACCGCCAGCCCAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS-3UTR GCA 90 bp CCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGCCTGGACCAGCCTGTTaGTCAGTTCCAGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PLSRPVGNKQAGQVSFTVPGPAC*SVPEQQ
Trigger: CTGCTGCTCTGGAACTGAGCAACAGGCTGGTCCAGG...CACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CCTCCCCGTGAGACACGGAGAGACACTTGGCTGAGTGGGGTCCATGGGTCCAAACCCGCCTGCAGCTGCTaGTTCAGATCTTGCTCAATG +
Preference number: 4 (lower is better)
Translates to: PPRETRRDTWLSGVHGSKPACSC*FRSCSM
Trigger: CATTGAGCAAGATCTGAACCAGCAGCTGCAGGCGGG...TTTGGACCCATGGACCCCACTCAGCCAAGTGTCTCTCCGTGTCTCACGGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp GTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTGTGAGTCAGGGCGTGTaGTGTCCAGAAGGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: VGHSNQENRELVAPLWLAVSQGV*CPEGEL
Trigger: CAACTCCCCTTCTGGACACCACACGCCCTGACTCAC...AGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp TCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGGCCACTGTCTGCAGCTCAGTaGCCTGTGGGGGCTCTGTTA +
Preference number: 4 (lower is better)
Translates to: SLGQLATSRLGRYPSQWPLSAAQ*PVGALL
Trigger: TAACAGAGCCCCCACAGGCCACTGAGCTGCAGACAG...TGGCCACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp GTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTAGCTCTGAGCGGAACTaGGGCTCACTCAGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: VGHSNQENRELVAPLWLASSERN*GSLSSS
Trigger: ACTGGAGCTGAGTGAGCCCCAGTTCCGCTCAGAGCT...AGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTGGACACAGCTCTGAGCGGAACTaGGGCTCACTCAGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: HSNQENRELVAPLWLAGHSSERN*GSLSSS
Trigger: ACTGGAGCTGAGTGAGCCCCAGTTCCGCTCAGAGCT...GTGTCCAGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp GCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGTGGGATTCAGAGCTTTaGAGACCCGCAGGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: AVGHSNQENRELVAPLWLWDSEL*RPAGRG
Trigger: TCCCCTGCCTGCGGGTCTCCAAAGCTCTGAATCCCA...CAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CCTCCCCGTGAGACACGGAGAGACACTTGGCTGAGTGGGGTCCATGGGTCCAAACGTAGACCTCCTTACTaGGCAGGAAGATGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: PPRETRRDTWLSGVHGSKRRPPY*AGRCGH
Trigger: GTGCCCACATCTTCCTGCCCAGTAAGGAGGTCTACG...TTTGGACCCATGGACCCCACTCAGCCAAGTGTCTCTCCGTGTCTCACGGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp AGACAGGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAGCACTTCCAAATGAGTaGGTAGCAGGTAGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: RQGRGPKAGRPHSLGQLAALPNE*VAGSLQ
Trigger: TTGAAGACTACCTGCTACCCACTCATTTGGAAGTGC...TGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCCTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTGGACACGGTGAGCATAGCTCAAACAGAGGCTaGCTCAGTCTGCCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: QENRELVAPLWLAGHGEHSSNRG*LSLPSV
Trigger: CACTGAGGGCAGACTGAGCCAGCCTCTGTTTGAGCT...ATGCTCACCGTGTCCAGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CCTCCCCGTGAGACACGGAGAGACACTTGGCTGAGTGGGGTCCATGGGTCCAAAGAGCTGGTTAGGTACTaGAGCAGGTTGACCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PPRETRRDTWLSGVHGSKELVRY*SRLTSR
Trigger: CCTGCTGGTCAACCTGCTCCAGTACCTAACCAGCTC...TTTGGACCCATGGACCCCACTCAGCCAAGTGTCTCTCCGTGTCTCACGGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTGGACACGGTGAGCATCACGATGATGGGGCCTaGATGCAGCTGTGTCACGAT +
Preference number: 4 (lower is better)
Translates to: QENRELVAPLWLAGHGEHHDDGA*MQLCHD
Trigger: ATCGTGACACAGCTGCATCCAGGCCCCATCATCGTG...ATGCTCACCGTGTCCAGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp AGCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTAGCAGGCCGGGCAGCTaGTTCTTACGGATGTCCTGC +
Preference number: 4 (lower is better)
Translates to: SCGSQQSGKQGAGGTTVASRPGS*FLRMSC
Trigger: GCAGGACATCCGTAAGAACCAGCTGCCCGGCCTGCT...AGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp GGCCTAGCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTCCTGTACTGCTCGATaGGTAGCCACAGCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: GLAVGHSNQENRELVAPLSCTAR*VATAGP
Trigger: GGGACCTGCTGTGGCTACCCATCGAGCAGTACAGGA...CAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGCTAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGTCCTGTACTGCTCGATaGGTAGCCACAGCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: PLSRPVGNKQAGQVSFTVSCTAR*VATAGP
Trigger: GGGACCTGCTGTGGCTACCCATCGAGCAGTACAGGA...CACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp CCTTCACAGTGGCCATCCTTTGAAGGACCTGGTGGCCTAGCTGTGGGTCACAGCTCAGGAAGGTCACCTTaGTCCTCCGGAGCACAGTCT +
Preference number: 4 (lower is better)
Translates to: PSQWPSFEGPGGLAVGHSSGRSP*SSGAQS
Trigger: AGACTGTGCTCCGGAGGATCAAGGTGACCTTCCTGA...GCTGTGACCCACAGCTAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS-3UTR TCA 90 bp GCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGAGGGACAGTTCTGAGTaGCAATGGCAGGCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: AVGHSNQENRELVAPLWLRDSSE*QWQAVE
Trigger: CTCCACTGCCTGCCATTGTCACTCAGAACTGTCCCT...CAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp TGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCGTCCAGGGACAGTTCTaGGTGACAATGGCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: CGSQQSGKQGAGGTTVAGVQGQF*VTMAGS
Trigger: ACTGCCTGCCATTGTCACTCAGAACTGTCCCTGGAC...GCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp CCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGTGTGGGCACTGGGCATaGTCACATCCAGAGTACAGC +
Preference number: 4 (lower is better)
Translates to: PLSRPVGNKQAGQVSFTVCGHWA*SHPEYS
Trigger: GCTGTACTCTGGATGTGATCATGCCCAGTGCCCACA...CACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp GGACGTGGCCTGGGCTGGCGGTGGGCAAGTTTATTCCACTTCATGCAGACACTGAGGTGGACGTGTCCATaGCAATGTTGCTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: GRGLGWRWASLFHFMQTLRWTCP*QCCWRG
Trigger: CCCTCTCCAGCAACATTGTCATGGACACGTCCACCT...CAGTGTCTGCATGAAGTGGAATAAACTTGCCCACCGCCAGCCCAGGCCACGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS-3UTR TCA 90 bp GCACCACTGTGGCTGGCTGGACACGGTGAGCATGTTGGGACAGTGGGTGGATCTTTAGAACCCAAGGTATaGGAAGAGGCCCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: APLWLAGHGEHVGTVGGSLEPKV*EEAPGG
Trigger: TCCTCCTGGGGCCTCTTCTCATACCTTGGGTTCTAA...AGATCCACCCACTGTCCCAACATGCTCACCGTGTCCAGCCAGCCACAGTGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp CGTGAGACACGGAGAGACACTTGGCTGAGTGGGGTCCATGGGTCCAAAAGCCTCGGAAAGGCCTCGTTCTaGTTCAGCCTCACCATGAGC +
Preference number: 4 (lower is better)
Translates to: RETRRDTWLSGVHGSKSLGKASF*FSLTMS
Trigger: GCTCATGGTGAGGCTGAAGCAGAACGAGGCCTTTCC...GAGGCTTTTGGACCCATGGACCCCACTCAGCCAAGTGTCTCTCCGTGTCTCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp GCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGGAAAGGCCTCGTTCTaGTTCAGCCTCACCATGAGC +
Preference number: 4 (lower is better)
Translates to: AVGHSNQENRELVAPLWLGKASF*FSLTMS
Trigger: GCTCATGGTGAGGCTGAAGCAGAACGAGGCCTTTCC...CAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp GGCCTGGGCTGGCGGTGGGCAAGTTTATTCCACTTCATGCAGACACTGACCCACGGGGTCAAAAGCAGGTaGAGGGATCCCAGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: GLGWRWASLFHFMQTLTHGVKSR*RDPSCP
Trigger: AGGACAACTGGGATCCCTGCACCTGCTTTTGACCCC...GTGGGTCAGTGTCTGCATGAAGTGGAATAAACTTGCCCACCGCCAGCCCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS-3UTR GCA 90 bp TCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGGCCAGACGGGGAAGCAGTCTaGAGCAAGGTCAAGCTCACA +
Preference number: 4 (lower is better)
Translates to: SLGQLATSRLGRYPSQWPDGEAV*SKVKLT
Trigger: TGTGAGCTTGACCTTGCTGCAGACTGCTTCCCCGTC...TGGCCACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp GTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTGCACAGCTATGCACGTaGACCACGTTGTTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: VGHSNQENRELVAPLWLAAQLCT*TTLLEQ
Trigger: CTGCTCCAACAACGTGGTGCACGTGCATAGCTGTGC...AGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp CGTGAGACACGGAGAGACACTTGGCTGAGTGGGGTCCATGGGTCCAAAAGCCTCGCACAGCTATGCACGTaGACCACGTTGTTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: RETRRDTWLSGVHGSKSLAQLCT*TTLLEQ
Trigger: CTGCTCCAACAACGTGGTGCACGTGCATAGCTGTGC...GAGGCTTTTGGACCCATGGACCCCACTCAGCCAAGTGTCTCTCCGTGTCTCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp CAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGGCCATCCTTTGAATCTGTGTCCTCAGACTaGCCTTCCTGGGGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: QLATSRLGRYPSQWPSFESVSSD*PSWGLP
Trigger: CGGCAGCCCCCAGGAAGGGCAGTCTGAGGACACAGA...TTCAAAGGATGGCCACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp CCTCCCCGTGAGACACGGAGAGACACTTGGCTGAGTGGGGTCCATGGGTCCAAACTCATGGCCCCTGGATaGCACATCACAGATGGTTTG +
Preference number: 4 (lower is better)
Translates to: PPRETRRDTWLSGVHGSKLMAPG*HITDGL
Trigger: CAAACCATCTGTGATGTGGCATCCAGGGGCCATGAG...TTTGGACCCATGGACCCCACTCAGCCAAGTGTCTCTCCGTGTCTCACGGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp GCACCACTGTGGCTGGCTGGACACGGTGAGCATGTTGGGACAGTGGGTGGATCTAGAGCATGGTCCTTGTaGGCATCTGGAAGGATCTGG +
Preference number: 4 (lower is better)
Translates to: APLWLAGHGEHVGTVGGSRAWSL*ASGRIW
Trigger: CCAGATCCTTCCAGATGCGCACAAGGACCATGCTCT...AGATCCACCCACTGTCCCAACATGCTCACCGTGTCCAGCCAGCCACAGTGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CTGGCTGGACACGGTGAGCATGTTGGGACAGTGGGTGGATCTTGGGTGCCTGCAACACACACAGTGCAGTaGTCAGTGAGAAGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LAGHGEHVGTVGGSWVPATHTVQ*SVRSAA
Trigger: GGCTGCACTTCTCACTGACCACTGCACTGTGTGTGT...TGCAGGCACCCAAGATCCACCCACTGTCCCAACATGCTCACCGTGTCCAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS-3UTR CCA 90 bp AGCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGTGAGTCAGGGCGTGTaGTGTCCAGAAGGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: SCGSQQSGKQGAGGTTVAVSQGV*CPEGEL
Trigger: CAACTCCCCTTCTGGACACCACACGCCCTGACTCAC...AGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGAGCTCCACATCAGATTaGAAGTCGGCCAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: PLSRPVGNKQAGQVSFTVSSTSD*KSARSR
Trigger: CCTGGACCTGGCCGACTTCCAATCTGATGTGGAGCT...CACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp TCACAGTGGCCATCCTTTGAAGGACCTGGTGGCCTAGCTGTGGGTCACAGCAATGAAGTAGCCAAGCCCTaGTTGGCCACGGTACTGGGC +
Preference number: 4 (lower is better)
Translates to: SQWPSFEGPGGLAVGHSNEVAKP*LATVLG
Trigger: GCCCAGTACCGTGGCCAACCAGGGCTTGGCTACTTC...ATTGCTGTGACCCACAGCTAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp GGCCTGGGCTGGCGGTGGGCAAGTTTATTCCACTTCATGCAGACACTGACCCACAGCTCAAACAGAGGCTaGCTCAGTCTGCCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: GLGWRWASLFHFMQTLTHSSNRG*LSLPSV
Trigger: CACTGAGGGCAGACTGAGCCAGCCTCTGTTTGAGCT...GTGGGTCAGTGTCTGCATGAAGTGGAATAAACTTGCCCACCGCCAGCCCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS-3UTR CCA 90 bp GTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTCGTGCACCACGTTGTTaGAGCAGCGCAGCTCAAACA +
Preference number: 4 (lower is better)
Translates to: VGHSNQENRELVAPLWLARAPRC*SSAAQT
Trigger: TGTTTGAGCTGCGCTGCTCCAACAACGTGGTGCACG...AGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTGGACACGAGCTGGTTAGGTACTaGAGCAGGTTGACCAGCAGG +
Preference number: 4 (lower is better)
Translates to: HSNQENRELVAPLWLAGHELVRY*SRLTSR
Trigger: CCTGCTGGTCAACCTGCTCCAGTACCTAACCAGCTC...GTGTCCAGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp TGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCCCCACTCCGTTCACCTaGGAACAGATAGACGGAGAC +
Preference number: 4 (lower is better)
Translates to: CGSQQSGKQGAGGTTVAGPTPFT*EQIDGD
Trigger: GTCTCCGTCTATCTGTTCCCAGGTGAACGGAGTGGG...GCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGTCTGAGCAGTTGAGCTaGGCCAGGCCGATTAGGAGT +
Preference number: 4 (lower is better)
Translates to: PLSRPVGNKQAGQVSFTVSEQLS*ARPIRS
Trigger: ACTCCTAATCGGCCTGGCCCAGCTCAACTGCTCAGA...CACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp GGCCTAGCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTCTGAGCAGTTGAGCTaGGCCAGGCCGATTAGGAGT +
Preference number: 4 (lower is better)
Translates to: GLAVGHSNQENRELVAPLSEQLS*ARPIRS
Trigger: ACTCCTAATCGGCCTGGCCCAGCTCAACTGCTCAGA...CAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGCTAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp TCACAGTGGCCATCCTTTGAAGGACCTGGTGGCCTAGCTGTGGGTCACAGCAATGTCTCAGCTGTAGCCTaGATGGCCTGGACCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SQWPSFEGPGGLAVGHSNVSAVA*MAWTSL
Trigger: CAGGCTGGTCCAGGCCATCCAGGCTACAGCTGAGAC...ATTGCTGTGACCCACAGCTAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp GGCCTAGCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGAGTCCCTTCTGCTCATaGCCCCTGGATGCCACATCA +
Preference number: 4 (lower is better)
Translates to: GLAVGHSNQENRELVAPLSPFCS*PLDATS
Trigger: TGATGTGGCATCCAGGGGCCATGAGCAGAAGGGACT...CAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGCTAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp TCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGGCCAAGTCCCTTCTGCTCATaGCCCCTGGATGCCACATCA +
Preference number: 4 (lower is better)
Translates to: SLGQLATSRLGRYPSQWPSPFCS*PLDATS
Trigger: TGATGTGGCATCCAGGGGCCATGAGCAGAAGGGACT...TGGCCACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp TCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGGCCACGCCACTTGAGAGCATaGTCCTTGTGCGCATCTGGA +
Preference number: 4 (lower is better)
Translates to: SLGQLATSRLGRYPSQWPRHLRA*SLCASG
Trigger: TCCAGATGCGCACAAGGACCATGCTCTCAAGTGGCG...TGGCCACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp TCACAGTGGCCATCCTTTGAAGGACCTGGTGGCCTAGCTGTGGGTCACAGCAATGGCTGCAGGGTAAGCTaGAGGCCTGACACACACACA +
Preference number: 4 (lower is better)
Translates to: SQWPSFEGPGGLAVGHSNGCRVS*RPDTHT
Trigger: TGTGTGTGTGTCAGGCCTTCAGCTTACCCTGCAGCC...ATTGCTGTGACCCACAGCTAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS-3UTR TCA 90 bp GCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGATCCTCATCACCCAGTaGATGCTCCACCCTCACAAC +
Preference number: 4 (lower is better)
Translates to: AVGHSNQENRELVAPLWLILITQ*MLHPHN
Trigger: GTTGTGAGGGTGGAGCATTCACTGGGTGATGAGGAT...CAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS-3UTR TCA 90 bp GTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTAGGGTCACCACTACCTaGGGTAGAAAGTACTTGGCC +
Preference number: 4 (lower is better)
Translates to: VGHSNQENRELVAPLWLARVTTT*GRKYLA
Trigger: GGCCAAGTACTTTCTACCTCAGGTAGTGGTGACCCT...AGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp AGCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTAGTCACCCCTTCCTCTaGTGGGTAGATGGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: SCGSQQSGKQGAGGTTVASHPFL*WVDGWS
Trigger: GCTCCAACCATCTACCCATCAGAGGAAGGGGTGACT...AGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp CCTTCACAGTGGCCATCCTTTGAAGGACCTGGTGGCCTAGCTGTGGGTCACAGCCATAGAGGTGCCAGATaGAGGAGACCTCCCGTAGTA +
Preference number: 4 (lower is better)
Translates to: PSQWPSFEGPGGLAVGHSHRGAR*RRPPVV
Trigger: TACTACGGGAGGTCTCCTTCATCTGGCACCTCTATG...GCTGTGACCCACAGCTAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp TGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTGCATAGAGGTGCCAGATaGAGGAGACCTCCCGTAGTA +
Preference number: 4 (lower is better)
Translates to: WVTAIRKTGSWWHHCGWLHRGAR*RRPPVV
Trigger: TACTACGGGAGGTCTCCTTCATCTGGCACCTCTATG...CAGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp TGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCCCACCTGGTCCACAGTaGCATGCTTGCCATGGTAAT +
Preference number: 4 (lower is better)
Translates to: CGSQQSGKQGAGGTTVAGPPGPQ*HACHGN
Trigger: ATTACCATGGCAAGCATGTCACTGTGGACCAGGTGG...GCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp CACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTGGACACCCACCTGGTCCACAGTaGCATGCTTGCCATGGTAAT +
Preference number: 4 (lower is better)
Translates to: HSNQENRELVAPLWLAGHPPGPQ*HACHGN
Trigger: ATTACCATGGCAAGCATGTCACTGTGGACCAGGTGG...GTGTCCAGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp TCACAGTGGCCATCCTTTGAAGGACCTGGTGGCCTAGCTGTGGGTCACAGCAATCTTGAGCTTCAGCTCTaGGCAGTTGAGCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: SQWPSFEGPGGLAVGHSNLELQL*AVELGQ
Trigger: CTGGCCCAGCTCAACTGCTCAGAGCTGAAGCTCAAG...ATTGCTGTGACCCACAGCTAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp AGCTGGTGGCACCACTGTGGCTGGCTGGACACGGTGAGCATGTTGGGACAGTGGACATCACAGATGGTTTaGGCTGTATCCAGGATACCC +
Preference number: 4 (lower is better)
Translates to: SWWHHCGWLDTVSMLGQWTSQMV*AVSRIP
Trigger: GGGTATCCTGGATACAGCTCAAACCATCTGTGATGT...CCACTGTCCCAACATGCTCACCGTGTCCAGCCAGCCACAGTGGTGCCACCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp GGCCTAGCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGGCAAGCTTGTGGTCATaGATGAGGCCCAACTCTGAG +
Preference number: 4 (lower is better)
Translates to: GLAVGHSNQENRELVAPLASLWS*MRPNSE
Trigger: CTCAGAGTTGGGCCTCATGCATGACCACAAGCTTGC...CAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGCTAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS-3UTR GCA 90 bp CTGGCTGGACACGGTGAGCATGTTGGGACAGTGGGTGGATCTTGGGTGCCTGCATCATCACCCAGTGAATaGTCCACCCTCACAACAGTG +
Preference number: 4 (lower is better)
Translates to: LAGHGEHVGTVGGSWVPASSPSE*STLTTV
Trigger: CACTGTTGTGAGGGTGGAGCATTCACTGGGTGATGA...TGCAGGCACCCAAGATCCACCCACTGTCCCAACATGCTCACCGTGTCCAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS-3UTR GCA 90 bp TCACAGTGGCCATCCTTTGAAGGACCTGGTGGCCTAGCTGTGGGTCACAGCAATGCACCCGCCTGCAGCTaGTGGTTCAGATCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: SQWPSFEGPGGLAVGHSNAPACS*WFRSCS
Trigger: TGAGCAAGATCTGAACCAGCAGCTGCAGGCGGGTGC...ATTGCTGTGACCCACAGCTAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp AGGCTGGGCAGGTATCCTTCACAGTGGCCATCCTTTGAAGGACCTGGTGGCCTAGACGGGGAAGCAGTCTaGAGCAAGGTCAAGCTCACA +
Preference number: 4 (lower is better)
Translates to: RLGRYPSQWPSFEGPGGLDGEAV*SKVKLT
Trigger: TGTGAGCTTGACCTTGCTGCAGACTGCTTCCCCGTC...TAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGAAGGATACCTGCCCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp AGCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTCTGGTGGGAGCCACATaGAGTGCCTTGATGGTAAGC +
Preference number: 4 (lower is better)
Translates to: SCGSQQSGKQGAGGTTVALVGAT*SALMVS
Trigger: GCTTACCATCAAGGCACTGCATGTGGCTCCCACCAG...AGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTGGACACGGTGAGCATCGAATGGCCCATCTTTaGCAGCATCGAACTCAGCAA +
Preference number: 4 (lower is better)
Translates to: QENRELVAPLWLAGHGEHRMAHL*QHRTQQ
Trigger: TTGCTGAGTTCGATGCTGCCAAAGATGGGCCATTCG...ATGCTCACCGTGTCCAGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp TCACAGTGGCCATCCTTTGAAGGACCTGGTGGCCTAGCTGTGGGTCACAGCAATTGGGATTCAGAGCTTTaGAGACCCGCAGGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: SQWPSFEGPGGLAVGHSNWDSEL*RPAGRG
Trigger: TCCCCTGCCTGCGGGTCTCCAAAGCTCTGAATCCCA...ATTGCTGTGACCCACAGCTAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGTGGCCTCAGTGCTCCTaGGATTCAGAGCTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: PLSRPVGNKQAGQVSFTVWPQCS*DSELWR
Trigger: TCTCCAAAGCTCTGAATCCCAGGAGCACTGAGGCCA...CACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGGCACTGTCACCAGTGTaGAGAAGGTACTCTGGGACT +
Preference number: 4 (lower is better)
Translates to: PLSRPVGNKQAGQVSFTVALSPV*RRYSGT
Trigger: AGTCCCAGAGTACCTTCTCCACACTGGTGACAGTGC...CACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp GGCCTGGGCTGGCGGTGGGCAAGTTTATTCCACTTCATGCAGACACTGACCCACTCAGTCAGGTCTCGTTaGTTGATGAGGGCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: GLGWRWASLFHFMQTLTHSVRSR*LMRAVS
Trigger: GGAGACAGCCCTCATCAACCAACGAGACCTGACTGA...GTGGGTCAGTGTCTGCATGAAGTGGAATAAACTTGCCCACCGCCAGCCCAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS-3UTR CCA 90 bp CCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGCTCACTTTGCTGAGCTaGATCTCCATGAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: PLSRPVGNKQAGQVSFTVLTLLS*ISMRTW
Trigger: CCAGGTCCTCATGGAGATCCAGCTCAGCAAAGTGAG...CACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CCTCCCCGTGAGACACGGAGAGACACTTGGCTGAGTGGGGTCCATGGGTCCAAAGGGTACACTTCATGCTaGAAGCTCACTTTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: PPRETRRDTWLSGVHGSKGYTSC*KLTLLS
Trigger: GCTCAGCAAAGTGAGCTTCCAGCATGAAGTGTACCC...TTTGGACCCATGGACCCCACTCAGCCAAGTGTCTCTCCGTGTCTCACGGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTGGACACGGTGAGCATAAGAAGAGGGCATCCTaGTCCACATTGAGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: QENRELVAPLWLAGHGEHKKRAS*STLSLR
Trigger: TCTGAGGCTCAATGTGGACCAGGATGCCCTCTTCTT...ATGCTCACCGTGTCCAGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGTGCCCCCTAGCACGTTaGATGTTGCCTCTGTTGCTA +
Preference number: 4 (lower is better)
Translates to: PLSRPVGNKQAGQVSFTVCPLAR*MLPLLL
Trigger: TAGCAACAGAGGCAACATCCAACGTGCTAGGGGGCA...CACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp GGCCTAGCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGCCCCCTAGCACGTTaGATGTTGCCTCTGTTGCTA +
Preference number: 4 (lower is better)
Translates to: GLAVGHSNQENRELVAPLCPLAR*MLPLLL
Trigger: TAGCAACAGAGGCAACATCCAACGTGCTAGGGGGCA...CAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGCTAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp AGGCTGGGCAGGTATCCTTCACAGTGGCCATCCTTTGAAGGACCTGGTGGCCTATCCTTGACATTCTTGTaGGGGTCCAGGTGGATACGG +
Preference number: 4 (lower is better)
Translates to: RLGRYPSQWPSFEGPGGLSLTFL*GSRWIR
Trigger: CCGTATCCACCTGGACCCTCACAAGAATGTCAAGGA...TAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGAAGGATACCTGCCCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp AGCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTCAGGGGCGTCAAGGATaGAGAACTCATCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: SCGSQQSGKQGAGGTTVAQGRQG*RTHHCP
Trigger: TGGACAGTGATGAGTTCTGCATCCTTGACGCCCCTG...AGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp TCACAGTGGCCATCCTTTGAAGGACCTGGTGGCCTAGCTGTGGGTCACAGCAATAACCCTTGGAAGAGCTaGACAACCGAGTGCATGGGG +
Preference number: 4 (lower is better)
Translates to: SQWPSFEGPGGLAVGHSNNPWKS*TTECMG
Trigger: CCCCATGCACTCGGTTGTGCAGCTCTTCCAAGGGTT...ATTGCTGTGACCCACAGCTAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp AGCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTCTCATGGCCCCTGGATaGCACATCACAGATGGTTTG +
Preference number: 4 (lower is better)
Translates to: SCGSQQSGKQGAGGTTVALMAPG*HITDGL
Trigger: CAAACCATCTGTGATGTGGCATCCAGGGGCCATGAG...AGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp GGCCTGGGCTGGCGGTGGGCAAGTTTATTCCACTTCATGCAGACACTGACCCACCGAATGGCCCATCTTTaGCAGCATCGAACTCAGCAA +
Preference number: 4 (lower is better)
Translates to: GLGWRWASLFHFMQTLTHRMAHL*QHRTQQ
Trigger: TTGCTGAGTTCGATGCTGCCAAAGATGGGCCATTCG...GTGGGTCAGTGTCTGCATGAAGTGGAATAAACTTGCCCACCGCCAGCCCAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS-3UTR CCA 90 bp CAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGGCCATCCTTTGAACTGTCTGCAGCTCAGTaGCCTGTGGGGGCTCTGTTA +
Preference number: 4 (lower is better)
Translates to: QLATSRLGRYPSQWPSFELSAAQ*PVGALL
Trigger: TAACAGAGCCCCCACAGGCCACTGAGCTGCAGACAG...TTCAAAGGATGGCCACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp AGGCTGGGCAGGTATCCTTCACAGTGGCCATCCTTTGAAGGACCTGGTGGCCTACTCACTTTGCTGAGCTaGATCTCCATGAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: RLGRYPSQWPSFEGPGGLLTLLS*ISMRTW
Trigger: CCAGGTCCTCATGGAGATCCAGCTCAGCAAAGTGAG...TAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGAAGGATACCTGCCCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp TCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGGCCAGGGTACACTTCATGCTaGAAGCTCACTTTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: SLGQLATSRLGRYPSQWPGYTSC*KLTLLS
Trigger: GCTCAGCAAAGTGAGCTTCCAGCATGAAGTGTACCC...TGGCCACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp TCACAGTGGCCATCCTTTGAAGGACCTGGTGGCCTAGCTGTGGGTCACAGCAATAGGGTCACCACTACCTaGGGTAGAAAGTACTTGGCC +
Preference number: 4 (lower is better)
Translates to: SQWPSFEGPGGLAVGHSNRVTTT*GRKYLA
Trigger: GGCCAAGTACTTTCTACCTCAGGTAGTGGTGACCCT...ATTGCTGTGACCCACAGCTAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp CAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGGCCATCCTTTGAAAGTCACCCCTTCCTCTaGTGGGTAGATGGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: QLATSRLGRYPSQWPSFESHPFL*WVDGWS
Trigger: GCTCCAACCATCTACCCATCAGAGGAAGGGGTGACT...TTCAAAGGATGGCCACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp TCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGGCCAACATCACAGATGGTTTaGGCTGTATCCAGGATACCC +
Preference number: 4 (lower is better)
Translates to: SLGQLATSRLGRYPSQWPTSQMV*AVSRIP
Trigger: GGGTATCCTGGATACAGCTCAAACCATCTGTGATGT...TGGCCACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp CACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTGGACACTGCTGGTTCAGATCTTaGTCAATGAGCCACAAGTCC +
Preference number: 4 (lower is better)
Translates to: HSNQENRELVAPLWLAGHCWFRS*SMSHKS
Trigger: GGACTTGTGGCTCATTGAGCAAGATCTGAACCAGCA...GTGTCCAGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGGCCATCCTTTGAAGTCCTCAGCACCCAGTaGACGGCTCTTGTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: QLATSRLGRYPSQWPSFEVLSTQ*TALVQL
Trigger: AAGCTGAACAAGAGCCGTCCACTGGGTGCTGAGGAC...TTCAAAGGATGGCCACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp CAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGGCCATCCTTTGAACGTAGACCTCCTTACTaGGCAGGAAGATGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: QLATSRLGRYPSQWPSFERRPPY*AGRCGH
Trigger: GTGCCCACATCTTCCTGCCCAGTAAGGAGGTCTACG...TTCAAAGGATGGCCACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR GCA 90 bp AGGCTGGGCAGGTATCCTTCACAGTGGCCATCCTTTGAAGGACCTGGTGGCCTAGAGAAGAGATGTGTGTaGAGGACAGTGATGACGGTT +
Preference number: 4 (lower is better)
Translates to: RLGRYPSQWPSFEGPGGLEKRCV*RTVMTV
Trigger: AACCGTCATCACTGTCCTGCACACACATCTCTTCTC...TAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGAAGGATACCTGCCCAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp GCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCACTTCCAAATGAGTaGGTAGCAGGTAGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: AVGHSNQENRELVAPLWLALPNE*VAGSLQ
Trigger: TTGAAGACTACCTGCTACCCACTCATTTGGAAGTGC...CAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CCA 90 bp TCACAGTGGCCATCCTTTGAAGGACCTGGTGGCCTAGCTGTGGGTCACAGCAATAAGAAGAGGGCATCCTaGTCCACATTGAGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: SQWPSFEGPGGLAVGHSNKKRAS*STLSLR
Trigger: TCTGAGGCTCAATGTGGACCAGGATGCCCTCTTCTT...ATTGCTGTGACCCACAGCTAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp TCACAGTGGCCATCCTTTGAAGGACCTGGTGGCCTAGCTGTGGGTCACAGCAATAATCCGAGTCTAGCTTaGAGGCTGACTTGCACATCT +
Preference number: 4 (lower is better)
Translates to: SQWPSFEGPGGLAVGHSNNPSLA*RLTCTS
Trigger: AGATGTGCAAGTCAGCCTTCAAGCTAGACTCGGATT...ATTGCTGTGACCCACAGCTAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp CCTTCACAGTGGCCATCCTTTGAAGGACCTGGTGGCCTAGCTGTGGGTCACAGCTCACCAAAAATTCCTTaGCATTCTTGTGAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: PSQWPSFEGPGGLAVGHSSPKIP*HSCEGP
Trigger: TGGACCCTCACAAGAATGTCAAGGAATTTTTGGTGA...GCTGTGACCCACAGCTAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp TCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGGCCATCACCAAAAATTCCTTaGCATTCTTGTGAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: SLGQLATSRLGRYPSQWPSPKIP*HSCEGP
Trigger: TGGACCCTCACAAGAATGTCAAGGAATTTTTGGTGA...TGGCCACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp GCACCACTGTGGCTGGCTGGACACGGTGAGCATGTTGGGACAGTGGGTGGATCTTCACTCGTGTGCAAATaGAGAAACTTGTTGATCTTG +
Preference number: 4 (lower is better)
Translates to: APLWLAGHGEHVGTVGGSSLVCK*RNLLIL
Trigger: CAAGATCAACAAGTTTCTTCATTTGCACACGAGTGA...AGATCCACCCACTGTCCCAACATGCTCACCGTGTCCAGCCAGCCACAGTGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR TCA 90 bp GGACGTGGCCTGGGCTGGCGGTGGGCAAGTTTATTCCACTTCATGCAGACACTGTCACTCGTGTGCAAATaGAGAAACTTGTTGATCTTG +
Preference number: 4 (lower is better)
Translates to: GRGLGWRWASLFHFMQTLSLVCK*RNLLIL
Trigger: CAAGATCAACAAGTTTCTTCATTTGCACACGAGTGA...CAGTGTCTGCATGAAGTGGAATAAACTTGCCCACCGCCAGCCCAGGCCACGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS-3UTR GCA 90 bp CAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGGCCATCCTTTGAAAGTCTCAATGGTCTGTaGAAACATTTCCAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: QLATSRLGRYPSQWPSFESLNGL*KHFQPL
Trigger: GAGGGGCTGGAAATGTTTGCACAGACCATTGAGACT...TTCAAAGGATGGCCACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS CCA 90 bp CAGCCTGGCCAGCCCAGGGGTCCCGGTCAGGCCGTAGGTCTGGGATaGGGAAGCGTAGCCTCAGGGTGGCCCGGGGTGCTGAGAGACGAA +
Preference number: 5 (lower is better)
Translates to: QPGQPRGPGQAVGLG*GSVASGWPGVLRDE
Trigger: TTCGTCTCTCAGCACCCCGGGCCACCCTGAGGCTACGCTTCCCCATCCCAGACCTACGGCCTGACCGGGACCCCTGGGCTGGCCAGGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 90 bp TTGAGCTCTGAGCGGAACTGGGGCTCACTCAGCTCCAGTCGCAGCTaGTCAGCCCGCACAGCCTGGCCAGCCCAGGGGTCCCGGTCAGGC +
Preference number: 5 (lower is better)
Translates to: LSSERNWGSLSSSRS*SARTAWPAQGSRSG
Trigger: GCCTGACCGGGACCCCTGGGCTGGCCAGGCTGTGCGGGCTGAGCAGCTGCGACTGGAGCTGAGTGAGCCCCAGTTCCGCTCAGAGCTCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp AAGTGCACAGACAGGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCCCGAGTGGGGTGGGGTaGAGGGTCGGTGGAAGGCCA +
Preference number: 5 (lower is better)
Translates to: KCTDRAEAPKPGGPTLSAPSGVG*RVGGRP
Trigger: TGGCCTTCCACCGACCCTCAACCCCACCCCACTCGG...GGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCCTGTCTGTGCACTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 90 bp GGTTGCTGGCTGTCTCTGTGTCCTCAGACTGCCCTTCCTGGGGGCTaGCGGGCCGGCTGTGGGTCTCTCGGGGAGCCTCAGAAGTGTCCC +
Preference number: 5 (lower is better)
Translates to: GCWLSLCPQTALPGG*RAGCGSLGEPQKCP
Trigger: GGGACACTTCTGAGGCTCCCCGAGAGACCCACAGCCGGCCCGGCAGCCCCCAGGAAGGGCAGTCTGAGGACACAGAGACAGCCAGCAACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 90 bp TCCGGTGGGTTGCTGGCTGTCTCTGTGTCCTCAGACTGCCCTTCCTaGGGGCTGCCGGGCCGGCTGTGGGTCTCTCGGGGAGCCTCAGAA +
Preference number: 5 (lower is better)
Translates to: SGGLLAVSVSSDCPS*GLPGRLWVSRGASE
Trigger: TTCTGAGGCTCCCCGAGAGACCCACAGCCGGCCCGGCAGCCCCCAGGAAGGGCAGTCTGAGGACACAGAGACAGCCAGCAACCCACCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 90 bp CGGCTGGTGCACGTCCACAGGTGGGGCCTGGCTGGGGTCCCGCACTaGTTCGTCACAGTACTCCAGTCTCTGCACTCGGACCTCCACAGC +
Preference number: 5 (lower is better)
Translates to: RLVHVHRWGLAGVPH*FVTVLQSLHSDLHS
Trigger: GCTGTGGAGGTCCGAGTGCAGAGACTGGAGTACTGTGACGAAGCAGTGCGGGACCCCAGCCAGGCCCCACCTGTGGACGTGCACCAGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS GCA 90 bp GCAGCCCTGGGCCATAGGCACTCCAGCACCTCCAGCTGTCCAAAGTaGACTTCGGTGCTGCTTGTCCTCCGGCTGTGGCTGCCCGTGCGC +
Preference number: 5 (lower is better)
Translates to: AALGHRHSSTSSCPK*TSVLLVLRLWLPVR
Trigger: GCGCACGGGCAGCCACAGCCGGAGGACAAGCAGCACCGAAGTGCACTTTGGACAGCTGGAGGTGCTGGAGTGCCTATGGCCCAGGGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 90 bp GCAGGAAGGCAGGCGGCTGGTGCACGTCCACAGGTGGGGCCTGGCTaGGGTCCCGCACTGCTTCGTCACAGTACTCCAGTCTCTGCACTC +
Preference number: 5 (lower is better)
Translates to: AGRQAAGARPQVGPG*GPALLRHSTPVSAL
Trigger: GAGTGCAGAGACTGGAGTACTGTGACGAAGCAGTGCGGGACCCCAGCCAGGCCCCACCTGTGGACGTGCACCAGCCGCCTGCCTTCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS CCA 90 bp CAGCAGCTTGTGCAGGAAGGCAGGCGGCTGGTGCACGTCCACAGGTaGGGCCTGGCTGGGGTCCCGCACTGCTTCGTCACAGTACTCCAG +
Preference number: 5 (lower is better)
Translates to: QQLVQEGRRLVHVHR*GLAGVPHCFVTVLQ
Trigger: CTGGAGTACTGTGACGAAGCAGTGCGGGACCCCAGCCAGGCCCCACCTGTGGACGTGCACCAGCCGCCTGCCTTCCTGCACAAGCTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS-3UTR CAA 90 bp GGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCGCAGGGTCTGCAAGGTaGACGGCACTGAGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: GRGPKAGRPHSLGQLATSAGSAR*TALSSL
Trigger: GAGGCTGCTCAGTGCCGTCAACCTTGCAGACCCTGC...GCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp GGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCTGTCCAGAAGGGGAGTaGGGGCCATCTTGCCACCCG +
Preference number: 5 (lower is better)
Translates to: GRGPKAGRPHSLGQLATSCPEGE*GPSCHP
Trigger: CGGGTGGCAAGATGGCCCCAACTCCCCTTCTGGACA...GCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp CCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCTCGTACATGGTCCGCTaGGAGGAGAAGGGCGAGGGC +
Preference number: 5 (lower is better)
Translates to: PKAGRPHSLGQLATSRLGSYMVR*EEKGEG
Trigger: GCCCTCGCCCTTCTCCTCCAAGCGGACCATGTACGA...GCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp AGACAGGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAAGGTACTGGAGCAGGTaGACCAGCAGGGCGCAGGAG +
Preference number: 5 (lower is better)
Translates to: RQGRGPKAGRPHSLGQLARYWSR*TSRAQE
Trigger: CTCCTGCGCCCTGCTGGTCAACCTGCTCCAGTACCT...TGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCCTGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS TCA 90 bp CCGGCGAATGGTCTGTGTGTGGCGCAGATGGGCGCAGGGTCGGGCTaGGGCTTCGGAGCCAGAGTGACTGGGGAAGCTCAGGATCTCCGT +
Preference number: 5 (lower is better)
Translates to: PANGLCVAQMGAGSG*GFGARVTGEAQDLR
Trigger: ACGGAGATCCTGAGCTTCCCCAGTCACTCTGGCTCCGAAGCCTCAGCCCGACCCTGCGCCCATCTGCGCCACACACAGACCATTCGCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 90 bp TTGTGCAGGAAGGCAGGCGGCTGGTGCACGTCCACAGGTGGGGCCTaGCTGGGGTCCCGCACTGCTTCGTCACAGTACTCCAGTCTCTGC +
Preference number: 5 (lower is better)
Translates to: LCRKAGGWCTSTGGA*LGSRTASSQYSSLC
Trigger: GCAGAGACTGGAGTACTGTGACGAAGCAGTGCGGGACCCCAGCCAGGCCCCACCTGTGGACGTGCACCAGCCGCCTGCCTTCCTGCACAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS CCA 90 bp CCCGGTCAGGCCGTAGGTCTGGGATGGGGAAGCGTAGCCTCAGGGTaGCCCGGGGTGCTGAGAGACGAAACACTGTCTGCAGCTCAGTGG +
Preference number: 5 (lower is better)
Translates to: PGQAVGLGWGSVASG*PGVLRDETLSAAQW
Trigger: CCACTGAGCTGCAGACAGTGTTTCGTCTCTCAGCACCCCGGGCCACCCTGAGGCTACGCTTCCCCATCCCAGACCTACGGCCTGACCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 90 bp ACCTGGTGTTGCCGTCCAATGCCACCCTGGGTACGCCAGGAGTTCTaGGGACGGTTGGGACCAGAGGAGCGGGAAGGTGAGACCCTGGGG +
Preference number: 5 (lower is better)
Translates to: TWCCRPMPPWVRQEF*GRLGPEEREGETLG
Trigger: CCCCAGGGTCTCACCTTCCCGCTCCTCTGGTCCCAACCGTCCCCAGAACTCCTGGCGTACCCAGGGTGGCATTGGACGGCAACACCAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp CCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCCCTGATACCTCCAACTaGGGGCCTGGAAAGGCCTCG +
Preference number: 5 (lower is better)
Translates to: PKAGRPHSLGQLATSRLGPDTSN*GPGKAS
Trigger: CGAGGCCTTTCCAGGCCCCAAGTTGGAGGTATCAGG...GCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp CAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGTCGTACATGGTCCGCTaGGAGGAGAAGGGCGAGGGC +
Preference number: 5 (lower is better)
Translates to: QSREAPLSRPVGNKQAGQSYMVR*EEKGEG
Trigger: GCCCTCGCCCTTCTCCTCCAAGCGGACCATGTACGA...CTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS TCA 90 bp CAGATAGACGGAGACGGGAGAGGCCTGAGGAAGTGGGCCACCCGATaGCTGGGCCAGCTCCTGCAGGCCGCGCCGTTCAGTATCCAGAAG +
Preference number: 5 (lower is better)
Translates to: QIDGDGRGLRKWATR*LGQLLQAAPFSIQK
Trigger: CTTCTGGATACTGAACGGCGCGGCCTGCAGGAGCTGGCCCAGTCATCGGGTGGCCCACTTCCTCAGGCCTCTCCCGTCTCCGTCTATCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 90 bp CAAAGTGCACTTCGGTGCTGCTTGTCCTCCGGCTGTGGCTGCCCGTaGGCAGCTCCCAGGACAGCTGCACGGCTGTGCCAGTTAACCGGA +
Preference number: 5 (lower is better)
Translates to: QSALRCCLSSGCGCP*AAPRTAARLCQLTG
Trigger: TCCGGTTAACTGGCACAGCCGTGCAGCTGTCCTGGGAGCTGCGCACGGGCAGCCACAGCCGGAGGACAAGCAGCACCGAAGTGCACTTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 90 bp GCTGTCCAAAGTGCACTTCGGTGCTGCTTGTCCTCCGGCTGTGGCTaGCCGTGCGCAGCTCCCAGGACAGCTGCACGGCTGTGCCAGTTA +
Preference number: 5 (lower is better)
Translates to: AVQSALRCCLSSGCG*PCAAPRTAARLCQL
Trigger: TAACTGGCACAGCCGTGCAGCTGTCCTGGGAGCTGCGCACGGGCAGCCACAGCCGGAGGACAAGCAGCACCGAAGTGCACTTTGGACAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 90 bp GCCCCACGCTGCAGCCCCCGAATGAGGCGCCCATCTTTCCTGTACTaGTCGATGGGTAGCCACAGCAGGTCCCGGAACCCTTGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: APRCSPRMRRPSFLY*SMGSHSRSRNPWKS
Trigger: GCTCTTCCAAGGGTTCCGGGACCTGCTGTGGCTACCCATCGAGCAGTACAGGAAAGATGGGCGCCTCATTCGGGGGCTGCAGCGTGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 90 bp CGGACGTGGCTACAAGGGCAGGCCCTCTGGAAGCGTGGCCTGAGATaGGAGAAGTCCCGGGAGCCGAATGGCCCATCTTTGGCAGCATCG +
Preference number: 5 (lower is better)
Translates to: RTWLQGQALWKRGLR*EKSREPNGPSLAAS
Trigger: CGATGCTGCCAAAGATGGGCCATTCGGCTCCCGGGACTTCTCCCATCTCAGGCCACGCTTCCAGAGGGCCTGCCCTTGTAGCCACGTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 90 bp GGGTGGCCCGGGGTGCTGAGAGACGAAACACTGTCTGCAGCTCAGTaGCCTGTGGGGGCTCTGTTAGTAGGCCAGCAGGTGGCTCAGAGG +
Preference number: 5 (lower is better)
Translates to: GWPGVLRDETLSAAQ*PVGALLVGQQVAQR
Trigger: CCTCTGAGCCACCTGCTGGCCTACTAACAGAGCCCCCACAGGCCACTGAGCTGCAGACAGTGTTTCGTCTCTCAGCACCCCGGGCCACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp CCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCCAGCTCCACATCAGATaGGAAGTCGGCCAGGTCCAG +
Preference number: 5 (lower is better)
Translates to: PKAGRPHSLGQLATSRLGQLHIR*EVGQVQ
Trigger: CTGGACCTGGCCGACTTCCAATCTGATGTGGAGCTG...GCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp AGCTGGTGGCACCACTGTGGCTGGCTGGACACGGTGAGCATGTTGGGACAGTGGGGGCCAGGCCCACTGTaGAGCTCTGAGCGGAACTGG +
Preference number: 5 (lower is better)
Translates to: SWWHHCGWLDTVSMLGQWGPGPL*SSERNW
Trigger: CCAGTTCCGCTCAGAGCTCAACAGTGGGCCTGGCCC...CCACTGTCCCAACATGCTCACCGTGTCCAGCCAGCCACAGTGGTGCCACCAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp GGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGACGTGCACCACGTTGTaGGAGCAGCGCAGCTCAAAC +
Preference number: 5 (lower is better)
Translates to: GQRPQSREAPLSRPVGNKTCTTL*EQRSSN
Trigger: GTTTGAGCTGCGCTGCTCCAACAACGTGGTGCACGT...CTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS TCA 90 bp ACGCCAGGAGTTCTGGGGACGGTTGGGACCAGAGGAGCGGGAAGGTaGGACCCTGGGGCCTGTGAGGCCTACTCTTGCTCTGTAAGTGGG +
Preference number: 5 (lower is better)
Translates to: TPGVLGTVGTRGAGR*DPGACEAYSCSVSG
Trigger: CCCACTTACAGAGCAAGAGTAGGCCTCACAGGCCCCAGGGTCTCACCTTCCCGCTCCTCTGGTCCCAACCGTCCCCAGAACTCCTGGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 90 bp AGCTCCTCAAAGTATAGGCAGACCCCACTCAGCTGCAGCAGCTTGTaGAGGAAGGCAGGCGGCTGGTGCACGTCCACAGGTGGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: SSSKYRQTPLSCSSL*RKAGGWCTSTGGAW
Trigger: CCAGGCCCCACCTGTGGACGTGCACCAGCCGCCTGCCTTCCTGCACAAGCTGCTGCAGCTGAGTGGGGTCTGCCTATACTTTGAGGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 90 bp CGTAGCCTCAGGGTGGCCCGGGGTGCTGAGAGACGAAACACTGTCTaGAGCTCAGTGGCCTGTGGGGGCTCTGTTAGTAGGCCAGCAGGT +
Preference number: 5 (lower is better)
Translates to: RSLRVARGAERRNTV*SSVACGGSVSRPAG
Trigger: ACCTGCTGGCCTACTAACAGAGCCCCCACAGGCCACTGAGCTGCAGACAGTGTTTCGTCTCTCAGCACCCCGGGCCACCCTGAGGCTACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 90 bp CGAAGACAGCACTCCGGCCCTCCGACGCTGCTGGTGGGAGCCACATaGAGTGCCTTGATGGTAAGCATGTTGGAGTGTGTGCGCCGTGGC +
Preference number: 5 (lower is better)
Translates to: RRQHSGPPTLLVGAT*SALMVSMLECVRRG
Trigger: GCCACGGCGCACACACTCCAACATGCTTACCATCAAGGCACTGCATGTGGCTCCCACCAGCAGCGTCGGAGGGCCGGAGTGCTGTCTTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 90 bp AGCTGGATCTCCATGAGGACCTGGTGTTGCCGTCCAATGCCACCCTaGGTACGCCAGGAGTTCTGGGGACGGTTGGGACCAGAGGAGCGG +
Preference number: 5 (lower is better)
Translates to: SWISMRTWCCRPMPP*VRQEFWGRLGPEER
Trigger: CCGCTCCTCTGGTCCCAACCGTCCCCAGAACTCCTGGCGTACCCAGGGTGGCATTGGACGGCAACACCAGGTCCTCATGGAGATCCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp AAGTGCACAGACAGGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCTTCCCGAAGGCACTCTaGAGCCAGCTGCAAGCTTGT +
Preference number: 5 (lower is better)
Translates to: KCTDRAEAPKPGGPTLSAFPKAL*SQLQAC
Trigger: ACAAGCTTGCAGCTGGCTCAAGAGTGCCTTCGGGAA...GGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCCTGTCTGTGCACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS-3UTR CAA 90 bp CAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTGGACACGGTGAGCATCTCAGCTGCAGCAGCTaGTGCAGGAAGGCAGGCGGC +
Preference number: 5 (lower is better)
Translates to: QENRELVAPLWLAGHGEHLSCSS*CRKAGG
Trigger: GCCGCCTGCCTTCCTGCACAAGCTGCTGCAGCTGAG...ATGCTCACCGTGTCCAGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp GCACCACTGTGGCTGGCTGGACACGGTGAGCATGTTGGGACAGTGGGTGGATCTCTCAGCTGCAGCAGCTaGTGCAGGAAGGCAGGCGGC +
Preference number: 5 (lower is better)
Translates to: APLWLAGHGEHVGTVGGSLSCSS*CRKAGG
Trigger: GCCGCCTGCCTTCCTGCACAAGCTGCTGCAGCTGAG...AGATCCACCCACTGTCCCAACATGCTCACCGTGTCCAGCCAGCCACAGTGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp GGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGTCCAAATTGAGGGGGTaGGTGATGGGGTACAGGCTG +
Preference number: 5 (lower is better)
Translates to: GQRPQSREAPLSRPVGNKSKLRG*VMGYRL
Trigger: CAGCCTGTACCCCATCACCAACCCCCTCAATTTGGA...CTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp GTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTCCGAGTGGGGTGGGGTaGAGGGTCGGTGGAAGGCCA +
Preference number: 5 (lower is better)
Translates to: VGHSNQENRELVAPLWLAPSGVG*RVGGRP
Trigger: TGGCCTTCCACCGACCCTCAACCCCACCCCACTCGG...AGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp GGCCTGGGCTGGCGGTGGGCAAGTTTATTCCACTTCATGCAGACACTGACCCACGGAGTTGGGGCCATCTaGCCACCCGAGTGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: GLGWRWASLFHFMQTLTHGVGAI*PPEWGG
Trigger: CCCACCCCACTCGGGTGGCAAGATGGCCCCAACTCC...GTGGGTCAGTGTCTGCATGAAGTGGAATAAACTTGCCCACCGCCAGCCCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS-3UTR CAA 90 bp TGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTGGGAGTTGGGGCCATCTaGCCACCCGAGTGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: WVTAIRKTGSWWHHCGWLGVGAI*PPEWGG
Trigger: CCCACCCCACTCGGGTGGCAAGATGGCCCCAACTCC...CAGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp GGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCCTCTCCACCTCACACTaGTCAGACAGGTACAGAGCG +
Preference number: 5 (lower is better)
Translates to: GRGPKAGRPHSLGQLATSLSTSH*SDRYRA
Trigger: CGCTCTGTACCTGTCTGACAAGTGTGAGGTGGAGAG...GCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp AAGTGCACAGACAGGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCCTCTCCACCTCACACTaGTCAGACAGGTACAGAGCG +
Preference number: 5 (lower is better)
Translates to: KCTDRAEAPKPGGPTLSALSTSH*SDRYRA
Trigger: CGCTCTGTACCTGTCTGACAAGTGTGAGGTGGAGAG...GGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCCTGTCTGTGCACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp AGCTGGTGGCACCACTGTGGCTGGCTGGACACGGTGAGCATGTTGGGACAGTGGAGGTACTGGAGCAGGTaGACCAGCAGGGCGCAGGAG +
Preference number: 5 (lower is better)
Translates to: SWWHHCGWLDTVSMLGQWRYWSR*TSRAQE
Trigger: CTCCTGCGCCCTGCTGGTCAACCTGCTCCAGTACCT...CCACTGTCCCAACATGCTCACCGTGTCCAGCCAGCCACAGTGGTGCCACCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp AGACAGGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAGTCAGTCAGGTCTCGTaGGTTGATGAGGGCTGTCTC +
Preference number: 5 (lower is better)
Translates to: RQGRGPKAGRPHSLGQLAVSQVS*VDEGCL
Trigger: GAGACAGCCCTCATCAACCAACGAGACCTGACTGAC...TGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCCTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS TCA 90 bp GGCTCTGTTAGTAGGCCAGCAGGTGGCTCAGAGGGTGTGGTGACTTaGCGGAACAAGGCAGCAAGGCGGTCCAGGGACCCCAGCTCCACA +
Preference number: 5 (lower is better)
Translates to: GSVSRPAGGSEGVVT*RNKAARRSRDPSST
Trigger: TGTGGAGCTGGGGTCCCTGGACCGCCTTGCTGCCTTGTTCCGTCAAGTCACCACACCCTCTGAGCCACCTGCTGGCCTACTAACAGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS TCA 90 bp TCTTGGAGGTGGCCAGCCGGTCTCGGATCTCTAGCTCTTGAACAATaGGCACCTGGCGCGACAGTGGTCGCTCGTCCAGCTCCTGGCCCA +
Preference number: 5 (lower is better)
Translates to: SWRWPAGLGSLALEQ*APGATVVARPAPGP
Trigger: TGGGCCAGGAGCTGGACGAGCGACCACTGTCGCGCCAGGTGCTCATTGTTCAAGAGCTAGAGATCCGAGACCGGCTGGCCACCTCCAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS TCA 90 bp CTGTGGATGACCCAAAGGAGGCAGCCCCACGCTGCAGCCCCCGAATaGGGCGCCCATCTTTCCTGTACTGCTCGATGGGTAGCCACAGCA +
Preference number: 5 (lower is better)
Translates to: LWMTQRRQPHAAAPE*GAHLSCTARWVATA
Trigger: TGCTGTGGCTACCCATCGAGCAGTACAGGAAAGATGGGCGCCTCATTCGGGGGCTGCAGCGTGGGGCTGCCTCCTTTGGGTCATCCACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 90 bp TGCCACCCGAGTGGGGTGGGGTTGAGGGTCGGTGGAAGGCCATGTTaGTGTGAACAGAGGAGCCCAGGTCTACGCTGTACACGGAGAGCT +
Preference number: 5 (lower is better)
Translates to: CHPSGVGLRVGGRPC*CEQRSPGLRCTRRA
Trigger: AGCTCTCCGTGTACAGCGTAGACCTGGGCTCCTCTGTTCACAGCAACATGGCCTTCCACCGACCCTCAACCCCACCCCACTCGGGTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 90 bp AGCTCACACCGCCCAAGGTCATCTTCACCAGTGAGTCAGGGCGTGTaGTGTCCAGAAGGGGAGTTGGGGCCATCTTGCCACCCGAGTGGG +
Preference number: 5 (lower is better)
Translates to: SSHRPRSSSPVSQGV*CPEGELGPSCHPSG
Trigger: CCCACTCGGGTGGCAAGATGGCCCCAACTCCCCTTCTGGACACCACACGCCCTGACTCACTGGTGAAGATGACCTTGGGCGGTGTGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 90 bp CATTCTTGTGAGGGTCCAGGTGGATACGGACAGCTGCAGACAGCATaGGGGGACCCTGGCCCTTGCGGCCCAAGGTTCCTCGCTCAGTCA +
Preference number: 5 (lower is better)
Translates to: HSCEGPGGYGQLQTA*GDPGPCGPRFLAQS
Trigger: TGACTGAGCGAGGAACCTTGGGCCGCAAGGGCCAGGGTCCCCCCATGCTGTCTGCAGCTGTCCGTATCCACCTGGACCCTCACAAGAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 90 bp GCAGGGCGCAGGAGTCAGCACAGCTATGCACGTGCACCACGTTGTTaGAGCAGCGCAGCTCAAACAGAGGCTGGCTCAGTCTGCCCTCAG +
Preference number: 5 (lower is better)
Translates to: AGRRSQHSYARAPRC*SSAAQTEAGSVCPQ
Trigger: CTGAGGGCAGACTGAGCCAGCCTCTGTTTGAGCTGCGCTGCTCCAACAACGTGGTGCACGTGCATAGCTGTGCTGACTCCTGCGCCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 90 bp GCGACAGTGGTCGCTCGTCCAGCTCCTGGCCCAGGCCCCCAGCTATaGCCGACTCTTCTGGGTACACTTCATGCTGGAAGCTCACTTTGC +
Preference number: 5 (lower is better)
Translates to: ATVVARPAPGPGPQL*PTLLGTLHAGSSLC
Trigger: GCAAAGTGAGCTTCCAGCATGAAGTGTACCCAGAAGAGTCGGCCATAGCTGGGGGCCTGGGCCAGGAGCTGGACGAGCGACCACTGTCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp GGCCTGGGCTGGCGGTGGGCAAGTTTATTCCACTTCATGCAGACACTGACCCACCGGCTCTTGTTCAGCTaGTCGGCCAGGCCTGCAGGG +
Preference number: 5 (lower is better)
Translates to: GLGWRWASLFHFMQTLTHRLLFS*SARPAG
Trigger: CCCTGCAGGCCTGGCCGACAAGCTGAACAAGAGCCG...GTGGGTCAGTGTCTGCATGAAGTGGAATAAACTTGCCCACCGCCAGCCCAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS-3UTR CAA 90 bp GGCCTAGCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGCGGCTCTTGTTCAGCTaGTCGGCCAGGCCTGCAGGG +
Preference number: 5 (lower is better)
Translates to: GLAVGHSNQENRELVAPLRLLFS*SARPAG
Trigger: CCCTGCAGGCCTGGCCGACAAGCTGAACAAGAGCCG...CAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGCTAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp CCACATGGCATCTATCCCCCACCTCCCCGTGAGACACGGAGAGACACTTGGCTGCCCAGTGGACGGCTCTaGTTCAGCTTGTCGGCCAGG +
Preference number: 5 (lower is better)
Translates to: PHGIYPPPPRETRRDTWLPSGRL*FSLSAR
Trigger: CCTGGCCGACAAGCTGAACAAGAGCCGTCCACTGGG...CAGCCAAGTGTCTCTCCGTGTCTCACGGGGAGGTGGGGGATAGATGCCATGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp CAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGTCAGTCAGGTCTCGTaGGTTGATGAGGGCTGTCTC +
Preference number: 5 (lower is better)
Translates to: QSREAPLSRPVGNKQAGQVSQVS*VDEGCL
Trigger: GAGACAGCCCTCATCAACCAACGAGACCTGACTGAC...CTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp GGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGTGCTGGAAGCTCACTTaGCTGAGCTGGATCTCCATG +
Preference number: 5 (lower is better)
Translates to: GQRPQSREAPLSRPVGNKCWKLT*LSWISM
Trigger: CATGGAGATCCAGCTCAGCAAAGTGAGCTTCCAGCA...CTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS TCA 90 bp TCCACATCAGATTGGAAGTCGGCCAGGTCCAGGGACAGTTCTGAGTaGCAATGGCAGGCAGTGGAGCGCCGGGACCGGCTCTTGAGCACC +
Preference number: 5 (lower is better)
Translates to: STSDWKSARSRDSSE*QWQAVERRDRLLST
Trigger: GGTGCTCAAGAGCCGGTCCCGGCGCTCCACTGCCTGCCATTGTCACTCAGAACTGTCCCTGGACCTGGCCGACTTCCAATCTGATGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS TCA 90 bp CAGCTCCACATCAGATTGGAAGTCGGCCAGGTCCAGGGACAGTTCTaGGTGACAATGGCAGGCAGTGGAGCGCCGGGACCGGCTCTTGAG +
Preference number: 5 (lower is better)
Translates to: QLHIRLEVGQVQGQF*VTMAGSGAPGPALE
Trigger: CTCAAGAGCCGGTCCCGGCGCTCCACTGCCTGCCATTGTCACTCAGAACTGTCCCTGGACCTGGCCGACTTCCAATCTGATGTGGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 90 bp GCCTGGCTGGGGTCCCGCACTGCTTCGTCACAGTACTCCAGTCTCTaGACTCGGACCTCCACAGCCACACTTCGATCCTCATCACCCAGT +
Preference number: 5 (lower is better)
Translates to: AWLGSRTASSQYSSL*TRTSTATLRSSSPS
Trigger: ACTGGGTGATGAGGATCGAAGTGTGGCTGTGGAGGTCCGAGTGCAGAGACTGGAGTACTGTGACGAAGCAGTGCGGGACCCCAGCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS GCA 90 bp GTCTCGTACATGGTCCGCTTGGAGGAGAAGGGCGAGGGCTCAGGTTaGTGTAGCTCACACGGACTCTCGGTGGACAGCTCTAGATCCCGG +
Preference number: 5 (lower is better)
Translates to: VSYMVRLEEKGEGSG*CSSHGLSVDSSRSR
Trigger: CCGGGATCTAGAGCTGTCCACCGAGAGTCCGTGTGAGCTACAGCAACCTGAGCCCTCGCCCTTCTCCTCCAAGCGGACCATGTACGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 90 bp AGCAGGTTGACCAGCAGGGCGCAGGAGTCAGCACAGCTATGCACGTaGACCACGTTGTTGGAGCAGCGCAGCTCAAACAGAGGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: SRLTSRAQESAQLCT*TTLLEQRSSNRGWL
Trigger: GAGCCAGCCTCTGTTTGAGCTGCGCTGCTCCAACAACGTGGTGCACGTGCATAGCTGTGCTGACTCCTGCGCCCTGCTGGTCAACCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 90 bp CTGGCAACCCTTCCCGAAGGCACTCTTGAGCCAGCTGCAAGCTTGTaGTCATGCATGAGGCCCAACTCTGAGAGTCCGCAGCCCCTGGTC +
Preference number: 5 (lower is better)
Translates to: LATLPEGTLEPAASL*SCMRPNSESPQPLV
Trigger: GACCAGGGGCTGCGGACTCTCAGAGTTGGGCCTCATGCATGACCACAAGCTTGCAGCTGGCTCAAGAGTGCCTTCGGGAAGGGTTGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS CCA 90 bp CAGAGTGACTGGGGAAGCTCAGGATCTCCGTGTACTCTGGCTCTGTaGCAGCCCTGGGCCATAGGCACTCCAGCACCTCCAGCTGTCCAA +
Preference number: 5 (lower is better)
Translates to: QSDWGSSGSPCTLAL*QPWAIGTPAPPAVQ
Trigger: TTGGACAGCTGGAGGTGCTGGAGTGCCTATGGCCCAGGGCTGCCACAGAGCCAGAGTACACGGAGATCCTGAGCTTCCCCAGTCACTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 90 bp AGGCCGCGCCGTTCAGTATCCAGAAGGGCGTCAGTCAGGTCTCGTTaGTTGATGAGGGCTGTCTCCACAGGTAGGCATGAGGGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: RPRRSVSRRASVRSR*LMRAVSTGRHEGRE
Trigger: CTCCCTGCCCTCATGCCTACCTGTGGAGACAGCCCTCATCAACCAACGAGACCTGACTGACGCCCTTCTGGATACTGAACGGCGCGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp GCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGCGTGCAGCTGCCGATTaGCAGAGGTGGCTGTGGTGG +
Preference number: 5 (lower is better)
Translates to: AVGHSNQENRELVAPLWLRAAAD*QRWLWW
Trigger: CCACCACAGCCACCTCTGCAAATCGGCAGCTGCACG...CAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp TCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGGCCAGCAGGGTCTGCAAGGTaGACGGCACTGAGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: SLGQLATSRLGRYPSQWPAGSAR*TALSSL
Trigger: GAGGCTGCTCAGTGCCGTCAACCTTGCAGACCCTGC...TGGCCACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp TGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTGCCCAGTGGACGGCTCTaGTTCAGCTTGTCGGCCAGG +
Preference number: 5 (lower is better)
Translates to: WVTAIRKTGSWWHHCGWLPSGRL*FSLSAR
Trigger: CCTGGCCGACAAGCTGAACAAGAGCCGTCCACTGGG...CAGCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp TGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCTGTCCAGAAGGGGAGTaGGGGCCATCTTGCCACCCG +
Preference number: 5 (lower is better)
Translates to: CGSQQSGKQGAGGTTVAGCPEGE*GPSCHP
Trigger: CGGGTGGCAAGATGGCCCCAACTCCCCTTCTGGACA...GCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp GGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCAGCTTGAAGGCTGACTaGCACATCTTGAACCCCGAA +
Preference number: 5 (lower is better)
Translates to: GRGPKAGRPHSLGQLATSSLKAD*HILNPE
Trigger: TTCGGGGTTCAAGATGTGCAAGTCAGCCTTCAAGCT...GCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp GCACCACTGTGGCTGGCTGGACACGGTGAGCATGTTGGGACAGTGGGTGGATCTTGCACGTGCACCACGTaGTTGGAGCAGCGCAGCTCA +
Preference number: 5 (lower is better)
Translates to: APLWLAGHGEHVGTVGGSCTCTT*LEQRSS
Trigger: TGAGCTGCGCTGCTCCAACAACGTGGTGCACGTGCA...AGATCCACCCACTGTCCCAACATGCTCACCGTGTCCAGCCAGCCACAGTGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp GGCCTAGCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGGAGTTCTGGGGACGGTaGGGACCAGAGGAGCGGGAA +
Preference number: 5 (lower is better)
Translates to: GLAVGHSNQENRELVAPLEFWGR*GPEERE
Trigger: TTCCCGCTCCTCTGGTCCCAACCGTCCCCAGAACTC...CAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGCTAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp CCTTCACAGTGGCCATCCTTTGAAGGACCTGGTGGCCTAGCTGTGGGTCACAGCGAGTTCTGGGGACGGTaGGGACCAGAGGAGCGGGAA +
Preference number: 5 (lower is better)
Translates to: PSQWPSFEGPGGLAVGHSEFWGR*GPEERE
Trigger: TTCCCGCTCCTCTGGTCCCAACCGTCCCCAGAACTC...GCTGTGACCCACAGCTAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp CGTGAGACACGGAGAGACACTTGGCTGAGTGGGGTCCATGGGTCCAAAAGCCTCGGAGCTTCCGGTGGGTaGCTGGCTGTCTCTGTGTCC +
Preference number: 5 (lower is better)
Translates to: RETRRDTWLSGVHGSKSLGASGG*LAVSVS
Trigger: GGACACAGAGACAGCCAGCAACCCACCGGAAGCTCC...GAGGCTTTTGGACCCATGGACCCCACTCAGCCAAGTGTCTCTCCGTGTCTCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS TCA 90 bp GGCAGAAGTAGCCAAGCCCTGGTTGGCCACGGTACTGGGCTACGCTaGAGATGGTGCCTTGCTCCACATCTAGTACCAGCTCCCCGTGAG +
Preference number: 5 (lower is better)
Translates to: GRSSQALVGHGTGLR*RWCLAPHLVPAPRE
Trigger: CTCACGGGGAGCTGGTACTAGATGTGGAGCAAGGCACCATCTTCAGCGTAGCCCAGTACCGTGGCCAACCAGGGCTTGGCTACTTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 90 bp ACCCTTCCCGAAGGCACTCTTGAGCCAGCTGCAAGCTTGTGGTCATaGATGAGGCCCAACTCTGAGAGTCCGCAGCCCCTGGTCCTGAAC +
Preference number: 5 (lower is better)
Translates to: TLPEGTLEPAASLWS*MRPNSESPQPLVLN
Trigger: GTTCAGGACCAGGGGCTGCGGACTCTCAGAGTTGGGCCTCATGCATGACCACAAGCTTGCAGCTGGCTCAAGAGTGCCTTCGGGAAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS GCA 90 bp AGTTGTCCTGATACCTCCAACTTGGGGCCTGGAAAGGCCTCGTTCTaGTTCAGCCTCACCATGAGCTCCACGTACCCCGTGCAGCTGCCG +
Preference number: 5 (lower is better)
Translates to: SCPDTSNLGPGKASF*FSLTMSSTYPVQLP
Trigger: CGGCAGCTGCACGGGGTACGTGGAGCTCATGGTGAGGCTGAAGCAGAACGAGGCCTTTCCAGGCCCCAAGTTGGAGGTATCAGGACAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 90 bp AGGGACTCAGCCACAGCACCCGCCTGCAGCTGCTGGTTCAGATCTTaGTCAATGAGCCACAAGTCCTCAGCACCCAGTGGACGGCTCTTG +
Preference number: 5 (lower is better)
Translates to: RDSATAPACSCWFRS*SMSHKSSAPSGRLL
Trigger: CAAGAGCCGTCCACTGGGTGCTGAGGACTTGTGGCTCATTGAGCAAGATCTGAACCAGCAGCTGCAGGCGGGTGCTGTGGCTGAGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 90 bp ATGGGGTACAGGCTGAGGGACTCAGCCACAGCACCCGCCTGCAGCTaGTGGTTCAGATCTTGCTCAATGAGCCACAAGTCCTCAGCACCC +
Preference number: 5 (lower is better)
Translates to: MGYRLRDSATAPACS*WFRSCSMSHKSSAP
Trigger: GGGTGCTGAGGACTTGTGGCTCATTGAGCAAGATCTGAACCAGCAGCTGCAGGCGGGTGCTGTGGCTGAGTCCCTCAGCCTGTACCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 90 bp TACTGGAGCAGGTTGACCAGCAGGGCGCAGGAGTCAGCACAGCTATaGACGTGCACCACGTTGTTGGAGCAGCGCAGCTCAAACAGAGGC +
Preference number: 5 (lower is better)
Translates to: YWSRLTSRAQESAQL*TCTTLLEQRSSNRG
Trigger: GCCTCTGTTTGAGCTGCGCTGCTCCAACAACGTGGTGCACGTGCATAGCTGTGCTGACTCCTGCGCCCTGCTGGTCAACCTGCTCCAGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 90 bp TGGAAGCTCACTTTGCTGAGCTGGATCTCCATGAGGACCTGGTGTTaGCGTCCAATGCCACCCTGGGTACGCCAGGAGTTCTGGGGACGG +
Preference number: 5 (lower is better)
Translates to: WKLTLLSWISMRTWC*RPMPPWVRQEFWGR
Trigger: CCGTCCCCAGAACTCCTGGCGTACCCAGGGTGGCATTGGACGGCAACACCAGGTCCTCATGGAGATCCAGCTCAGCAAAGTGAGCTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 90 bp TGGGGAAGCTCAGGATCTCCGTGTACTCTGGCTCTGTGGCAGCCCTaGGCCATAGGCACTCCAGCACCTCCAGCTGTCCAAAGTGCACTT +
Preference number: 5 (lower is better)
Translates to: WGSSGSPCTLALWQP*AIGTPAPPAVQSAL
Trigger: AAGTGCACTTTGGACAGCTGGAGGTGCTGGAGTGCCTATGGCCCAGGGCTGCCACAGAGCCAGAGTACACGGAGATCCTGAGCTTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 90 bp CTCGTCCAGCTCCTGGCCCAGGCCCCCAGCTATGGCCGACTCTTCTaGGTACACTTCATGCTGGAAGCTCACTTTGCTGAGCTGGATCTC +
Preference number: 5 (lower is better)
Translates to: LVQLLAQAPSYGRLF*VHFMLEAHFAELDL
Trigger: GAGATCCAGCTCAGCAAAGTGAGCTTCCAGCATGAAGTGTACCCAGAAGAGTCGGCCATAGCTGGGGGCCTGGGCCAGGAGCTGGACGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp TGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGCCCTGATACCTCCAACTaGGGGCCTGGAAAGGCCTCG +
Preference number: 5 (lower is better)
Translates to: CGSQQSGKQGAGGTTVAGPDTSN*GPGKAS
Trigger: CGAGGCCTTTCCAGGCCCCAAGTTGGAGGTATCAGG...GCCAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp CAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGCTGCTGGTTCAGATCTaGCTCAATGAGCCACAAGTC +
Preference number: 5 (lower is better)
Translates to: QSREAPLSRPVGNKQAGQLLVQI*LNEPQV
Trigger: GACTTGTGGCTCATTGAGCAAGATCTGAACCAGCAG...CTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp CCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGTGCACGTGCACCACGTaGTTGGAGCAGCGCAGCTCA +
Preference number: 5 (lower is better)
Translates to: PLSRPVGNKQAGQVSFTVCTCTT*LEQRSS
Trigger: TGAGCTGCGCTGCTCCAACAACGTGGTGCACGTGCA...CACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp CCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGCCTGGGACCATGGGGTaGATACTGGCTGCTAGGCTG +
Preference number: 5 (lower is better)
Translates to: PLSRPVGNKQAGQVSFTVPGTMG*ILAARL
Trigger: CAGCCTAGCAGCCAGTATCAACCCCATGGTCCCAGG...CACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp AGCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGGAGCTTCCGGTGGGTaGCTGGCTGTCTCTGTGTCC +
Preference number: 5 (lower is better)
Translates to: SCGSQQSGKQGAGGTTVAGASGG*LAVSVS
Trigger: GGACACAGAGACAGCCAGCAACCCACCGGAAGCTCC...AGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp GGGCAGAGGCCCCAAAGCCGGGAGGCCCCACTCTCTCGGCCAGTTGGCAACAAGCACATCACAGATGGTTaGAGCTGTATCCAGGATACC +
Preference number: 5 (lower is better)
Translates to: GQRPQSREAPLSRPVGNKHITDG*SCIQDT
Trigger: GGTATCCTGGATACAGCTCAAACCATCTGTGATGTG...CTTGTTGCCAACTGGCCGAGAGAGTGGGGCCTCCCGGCTTTGGGGCCTCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS TCA 90 bp CAGCCACAGCACCCGCCTGCAGCTGCTGGTTCAGATCTTGCTCAATaGGCCACAAGTCCTCAGCACCCAGTGGACGGCTCTTGTTCAGCT +
Preference number: 5 (lower is better)
Translates to: QPQHPPAAAGSDLAQ*ATSPQHPVDGSCSA
Trigger: AGCTGAACAAGAGCCGTCCACTGGGTGCTGAGGACTTGTGGCTCATTGAGCAAGATCTGAACCAGCAGCTGCAGGCGGGTGCTGTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS TCA 90 bp AAGTGGGGTGAAGGCCAAAGTCTCTACCCCCATAGAGGTGCCAGATaGAGGAGACCTCCCGTAGTACCACACGGCTGCTGGGCACTGGGA +
Preference number: 5 (lower is better)
Translates to: KWGEGQSLYPHRGAR*RRPPVVPHGCWALG
Trigger: TCCCAGTGCCCAGCAGCCGTGTGGTACTACGGGAGGTCTCCTTCATCTGGCACCTCTATGGGGGTAGAGACTTTGGCCTTCACCCCACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS TCA 90 bp TTGTTGATCTTGGAGGTGGCCAGCCGGTCTCGGATCTCTAGCTCTTaGACAATGAGCACCTGGCGCGACAGTGGTCGCTCGTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: LLILEVASRSRISSS*TMSTWRDSGRSSSS
Trigger: GGAGCTGGACGAGCGACCACTGTCGCGCCAGGTGCTCATTGTTCAAGAGCTAGAGATCCGAGACCGGCTGGCCACCTCCAAGATCAACAA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 90 bp CAGTCCTGGGCCTCCTCCAATCGCCACTTGAGAGCATGGTCCTTGTaGGCATCTGGAAGGATCTGGTTACGCATGCCCCCTAGCACGTTG +
Preference number: 5 (lower is better)
Translates to: QSWASSNRHLRAWSL*ASGRIWLRMPPSTL
Trigger: CAACGTGCTAGGGGGCATGCGTAACCAGATCCTTCCAGATGCGCACAAGGACCATGCTCTCAAGTGGCGATTGGAGGAGGCCCAGGACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 90 bp CTGGTTCAGATCTTGCTCAATGAGCCACAAGTCCTCAGCACCCAGTaGACGGCTCTTGTTCAGCTTGTCGGCCAGGCCTGCAGGGTCTGC +
Preference number: 5 (lower is better)
Translates to: LVQILLNEPQVLSTQ*TALVQLVGQACRVC
Trigger: GCAGACCCTGCAGGCCTGGCCGACAAGCTGAACAAGAGCCGTCCACTGGGTGCTGAGGACTTGTGGCTCATTGAGCAAGATCTGAACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 90 bp AGAAGGGCGAGGGCTCAGGTTGCTGTAGCTCACACGGACTCTCGGTaGACAGCTCTAGATCCCGGCCTTTCTCATAGGCTGTCTCCCACT +
Preference number: 5 (lower is better)
Translates to: RRARAQVAVAHTDSR*TALDPGLSHRLSPT
Trigger: AGTGGGAGACAGCCTATGAGAAAGGCCGGGATCTAGAGCTGTCCACCGAGAGTCCGTGTGAGCTACAGCAACCTGAGCCCTCGCCCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 90 bp GGTCTCCAGGGATCACCATTTCCTCAGTCTCGTACATGGTCCGCTTaGAGGAGAAGGGCGAGGGCTCAGGTTGCTGTAGCTCACACGGAC +
Preference number: 5 (lower is better)
Translates to: GLQGSPFPQSRTWSA*RRRARAQVAVAHTD
Trigger: GTCCGTGTGAGCTACAGCAACCTGAGCCCTCGCCCTTCTCCTCCAAGCGGACCATGTACGAGACTGAGGAAATGGTGATCCCTGGAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 90 bp CCTGAAGTAGATAGGCTGCTGGTCAGAGGAGCTGTGGCTACTGCCTaGAGCTTCCGGTGGGTTGCTGGCTGTCTCTGTGTCCTCAGACTG +
Preference number: 5 (lower is better)
Translates to: PEVDRLLVRGAVATA*SFRWVAGCLCVLRL
Trigger: CAGTCTGAGGACACAGAGACAGCCAGCAACCCACCGGAAGCTCCAGGCAGTAGCCACAGCTCCTCTGACCAGCAGCCTATCTACTTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp GGCCTGGGCTGGCGGTGGGCAAGTTTATTCCACTTCATGCAGACACTGACCCACCAGCTCCACATCAGATaGGAAGTCGGCCAGGTCCAG +
Preference number: 5 (lower is better)
Translates to: GLGWRWASLFHFMQTLTHQLHIR*EVGQVQ
Trigger: CTGGACCTGGCCGACTTCCAATCTGATGTGGAGCTG...GTGGGTCAGTGTCTGCATGAAGTGGAATAAACTTGCCCACCGCCAGCCCAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS-3UTR CAA 90 bp CAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGGCCATCCTTTGAAGGGCCAGGCCCACTGTaGAGCTCTGAGCGGAACTGG +
Preference number: 5 (lower is better)
Translates to: QLATSRLGRYPSQWPSFEGPGPL*SSERNW
Trigger: CCAGTTCCGCTCAGAGCTCAACAGTGGGCCTGGCCC...TTCAAAGGATGGCCACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp CCACATGGCATCTATCCCCCACCTCCCCGTGAGACACGGAGAGACACTTGGCTGGCATCCTGGTCCACATaGAGCCTCAGAGGCATCATG +
Preference number: 5 (lower is better)
Translates to: PHGIYPPPPRETRRDTWLASWST*SLRGIM
Trigger: CATGATGCCTCTGAGGCTCAATGTGGACCAGGATGC...CAGCCAAGTGTCTCTCCGTGTCTCACGGGGAGGTGGGGGATAGATGCCATGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp AGGCTGGGCAGGTATCCTTCACAGTGGCCATCCTTTGAAGGACCTGGTGGCCTACCTGGGACCATGGGGTaGATACTGGCTGCTAGGCTG +
Preference number: 5 (lower is better)
Translates to: RLGRYPSQWPSFEGPGGLPGTMG*ILAARL
Trigger: CAGCCTAGCAGCCAGTATCAACCCCATGGTCCCAGG...TAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGAAGGATACCTGCCCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp AGCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTCAGGTCCCGGAACCCTaGGAAGAGCTGCACAACCGA +
Preference number: 5 (lower is better)
Translates to: SCGSQQSGKQGAGGTTVAQVPEP*EELHNR
Trigger: TCGGTTGTGCAGCTCTTCCAAGGGTTCCGGGACCTG...AGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp CTGGCTGGACACGGTGAGCATGTTGGGACAGTGGGTGGATCTTGGGTGCCTGCATCCTCCAATCGCCACTaGAGAGCATGGTCCTTGTGC +
Preference number: 5 (lower is better)
Translates to: LAGHGEHVGTVGGSWVPASSNRH*RAWSLC
Trigger: GCACAAGGACCATGCTCTCAAGTGGCGATTGGAGGA...TGCAGGCACCCAAGATCCACCCACTGTCCCAACATGCTCACCGTGTCCAGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 90 bp AAGTGGGTGGGGAGGTCAGATGGTCCTGAAGACGGGGAAGCAGTCTaGAGCAAGGTCAAGCTCACACCGCCCAAGGTCATCTTCACCAGT +
Preference number: 5 (lower is better)
Translates to: KWVGRSDGPEDGEAV*SKVKLTPPKVIFTS
Trigger: ACTGGTGAAGATGACCTTGGGCGGTGTGAGCTTGACCTTGCTGCAGACTGCTTCCCCGTCTTCAGGACCATCTGACCTCCCCACCCACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 90 bp GGTTCAGGGTCACCACTACCTGAGGTAGAAAGTACTTGGCCTCAGTaGTCCTGGGATTCAGAGCTTTGGAGACCCGCAGGCAGGGGACTG +
Preference number: 5 (lower is better)
Translates to: GSGSPLPEVESTWPQ*SWDSELWRPAGRGL
Trigger: CAGTCCCCTGCCTGCGGGTCTCCAAAGCTCTGAATCCCAGGAGCACTGAGGCCAAGTACTTTCTACCTCAGGTAGTGGTGACCCTGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 90 bp TCATGCTGGAAGCTCACTTTGCTGAGCTGGATCTCCATGAGGACCTaGTGTTGCCGTCCAATGCCACCCTGGGTACGCCAGGAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: SCWKLTLLSWISMRT*CCRPMPPWVRQEFW
Trigger: CCAGAACTCCTGGCGTACCCAGGGTGGCATTGGACGGCAACACCAGGTCCTCATGGAGATCCAGCTCAGCAAAGTGAGCTTCCAGCATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp GCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGTTCAGGAAGGTCACCTaGATCCTCCGGAGCACAGTC +
Preference number: 5 (lower is better)
Translates to: AVGHSNQENRELVAPLWLFRKVT*ILRSTV
Trigger: GACTGTGCTCCGGAGGATCAAGGTGACCTTCCTGAA...CAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS-3UTR CAA 90 bp GGCCTAGCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTCCAAATTGAGGGGGTaGGTGATGGGGTACAGGCTG +
Preference number: 5 (lower is better)
Translates to: GLAVGHSNQENRELVAPLSKLRG*VMGYRL
Trigger: CAGCCTGTACCCCATCACCAACCCCCTCAATTTGGA...CAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGCTAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp AGCTGGTGGCACCACTGTGGCTGGCTGGACACGGTGAGCATGTTGGGACAGTGGAGCTTGAAGGCTGACTaGCACATCTTGAACCCCGAA +
Preference number: 5 (lower is better)
Translates to: SWWHHCGWLDTVSMLGQWSLKAD*HILNPE
Trigger: TTCGGGGTTCAAGATGTGCAAGTCAGCCTTCAAGCT...CCACTGTCCCAACATGCTCACCGTGTCCAGCCAGCCACAGTGGTGCCACCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp GCACCACTGTGGCTGGCTGGACACGGTGAGCATGTTGGGACAGTGGGTGGATCTAGAAACTTGTTGATCTaGGAGGTGGCCAGCCGGTCT +
Preference number: 5 (lower is better)
Translates to: APLWLAGHGEHVGTVGGSRNLLI*EVASRS
Trigger: AGACCGGCTGGCCACCTCCAAGATCAACAAGTTTCT...AGATCCACCCACTGTCCCAACATGCTCACCGTGTCCAGCCAGCCACAGTGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp TCACAGTGGCCATCCTTTGAAGGACCTGGTGGCCTAGCTGTGGGTCACAGCAATCAGGTCCCGGAACCCTaGGAAGAGCTGCACAACCGA +
Preference number: 5 (lower is better)
Translates to: SQWPSFEGPGGLAVGHSNQVPEP*EELHNR
Trigger: TCGGTTGTGCAGCTCTTCCAAGGGTTCCGGGACCTG...ATTGCTGTGACCCACAGCTAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp CCTTCACAGTGGCCATCCTTTGAAGGACCTGGTGGCCTAGCTGTGGGTCACAGCTCCTCCAATCGCCACTaGAGAGCATGGTCCTTGTGC +
Preference number: 5 (lower is better)
Translates to: PSQWPSFEGPGGLAVGHSSSNRH*RAWSLC
Trigger: GCACAAGGACCATGCTCTCAAGTGGCGATTGGAGGA...GCTGTGACCCACAGCTAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS TCA 90 bp ACGCTGAAGATGGTGCCTTGCTCCACATCTAGTACCAGCTCCCCGTaGGTGACATCCAGCCGCTTCCCTGTCTCATCCTTAGCCTCACAG +
Preference number: 5 (lower is better)
Translates to: TLKMVPCSTSSTSSP*VTSSRFPVSSLASQ
Trigger: CTGTGAGGCTAAGGATGAGACAGGGAAGCGGCTGGATGTCACTCACGGGGAGCTGGTACTAGATGTGGAGCAAGGCACCATCTTCAGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS TCA 90 bp ATGTTGGAGTGTGTGCGCCGTGGCAGCCGCTCACTCGTGTGCAAATaGAGAAACTTGTTGATCTTGGAGGTGGCCAGCCGGTCTCGGATC +
Preference number: 5 (lower is better)
Translates to: MLECVRRGSRSLVCK*RNLLILEVASRSRI
Trigger: GATCCGAGACCGGCTGGCCACCTCCAAGATCAACAAGTTTCTTCATTTGCACACGAGTGAGCGGCTGCCACGGCGCACACACTCCAACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 90 bp ACAGCTCTAGATCCCGGCCTTTCTCATAGGCTGTCTCCCACTGTGTaGCACTGGACTGGGGGTTCAGGGTCACCACTACCTGAGGTAGAA +
Preference number: 5 (lower is better)
Translates to: TALDPGLSHRLSPTV*HWTGGSGSPLPEVE
Trigger: TTCTACCTCAGGTAGTGGTGACCCTGAACCCCCAGTCCAGTGGCACACAGTGGGAGACAGCCTATGAGAAAGGCCGGGATCTAGAGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 90 bp GAGGTAGAAAGTACTTGGCCTCAGTGCTCCTGGGATTCAGAGCTTTaGAGACCCGCAGGCAGGGGACTGGTGGCTTCTCTCCATCTTCGT +
Preference number: 5 (lower is better)
Translates to: EVESTWPQCSWDSEL*RPAGRGLVASLHLR
Trigger: ACGAAGATGGAGAGAAGCCACCAGTCCCCTGCCTGCGGGTCTCCAAAGCTCTGAATCCCAGGAGCACTGAGGCCAAGTACTTTCTACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 90 bp GTAGAGTTTGGCCTTTTCAGCTTCCAGGCAGAAGTAGCCAAGCCCTaGTTGGCCACGGTACTGGGCTACGCTGAAGATGGTGCCTTGCTC +
Preference number: 5 (lower is better)
Translates to: VEFGLFSFQAEVAKP*LATVLGYAEDGALL
Trigger: GAGCAAGGCACCATCTTCAGCGTAGCCCAGTACCGTGGCCAACCAGGGCTTGGCTACTTCTGCCTGGAAGCTGAAAAGGCCAAACTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 90 bp CACAGCGCAGGAGAAGAGATGTGTGTGCAGGACAGTGATGACGGTTaGGGGCAGGTATCCCAGCACAGGGTCATCCAGCACATCCAAGAA +
Preference number: 5 (lower is better)
Translates to: HSAGEEMCVQDSDDG*GQVSQHRVIQHIQE
Trigger: TTCTTGGATGTGCTGGATGACCCTGTGCTGGGATACCTGCCCCCAACCGTCATCACTGTCCTGCACACACATCTCTTCTCCTGCGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp GCACCACTGTGGCTGGCTGGACACGGTGAGCATGTTGGGACAGTGGGTGGATCTCTGCTGGTTCAGATCTaGCTCAATGAGCCACAAGTC +
Preference number: 5 (lower is better)
Translates to: APLWLAGHGEHVGTVGGSLLVQI*LNEPQV
Trigger: GACTTGTGGCTCATTGAGCAAGATCTGAACCAGCAG...AGATCCACCCACTGTCCCAACATGCTCACCGTGTCCAGCCAGCCACAGTGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp TCACAGTGGCCATCCTTTGAAGGACCTGGTGGCCTAGCTGTGGGTCACAGCAATACGTGCACCACGTTGTaGGAGCAGCGCAGCTCAAAC +
Preference number: 5 (lower is better)
Translates to: SQWPSFEGPGGLAVGHSNTCTTL*EQRSSN
Trigger: GTTTGAGCTGCGCTGCTCCAACAACGTGGTGCACGT...ATTGCTGTGACCCACAGCTAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp CCTTCACAGTGGCCATCCTTTGAAGGACCTGGTGGCCTAGCTGTGGGTCACAGCAGAAACTTGTTGATCTaGGAGGTGGCCAGCCGGTCT +
Preference number: 5 (lower is better)
Translates to: PSQWPSFEGPGGLAVGHSRNLLI*EVASRS
Trigger: AGACCGGCTGGCCACCTCCAAGATCAACAAGTTTCT...GCTGTGACCCACAGCTAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp TCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGGCCAGCCACATGCAGTGCCTaGATGGTAAGCATGTTGGAG +
Preference number: 5 (lower is better)
Translates to: SLGQLATSRLGRYPSQWPATCSA*MVSMLE
Trigger: CTCCAACATGCTTACCATCAAGGCACTGCATGTGGC...TGGCCACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS TCA 90 bp TGCGCCGTGGCAGCCGCTCACTCGTGTGCAAATGAAGAAACTTGTTaGTCTTGGAGGTGGCCAGCCGGTCTCGGATCTCTAGCTCTTGAA +
Preference number: 5 (lower is better)
Translates to: CAVAAAHSCANEETC*SWRWPAGLGSLALE
Trigger: TTCAAGAGCTAGAGATCCGAGACCGGCTGGCCACCTCCAAGATCAACAAGTTTCTTCATTTGCACACGAGTGAGCGGCTGCCACGGCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 90 bp CTAGATCCCGGCCTTTCTCATAGGCTGTCTCCCACTGTGTGCCACTaGACTGGGGGTTCAGGGTCACCACTACCTGAGGTAGAAAGTACT +
Preference number: 5 (lower is better)
Translates to: LDPGLSHRLSPTVCH*TGGSGSPLPEVEST
Trigger: AGTACTTTCTACCTCAGGTAGTGGTGACCCTGAACCCCCAGTCCAGTGGCACACAGTGGGAGACAGCCTATGAGAAAGGCCGGGATCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 90 bp TCTGGGGCAGGTGTCTGGGGGACACCTGATGCCATCGAGAAGAACTaGGCGTCTTCTTCATCTGAATCCGAGTCTAGCTTGAAGGCTGAC +
Preference number: 5 (lower is better)
Translates to: SGAGVWGTPDAIEKN*ASSSSESESSLKAD
Trigger: GTCAGCCTTCAAGCTAGACTCGGATTCAGATGAAGAAGACGCCCAGTTCTTCTCGATGGCATCAGGTGTCCCCCAGACACCTGCCCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 90 bp GAGTGGGTAGCAGGTAGTCTTCAATGGCCGCTCGATGGTAGAGTTTaGCCTTTTCAGCTTCCAGGCAGAAGTAGCCAAGCCCTGGTTGGC +
Preference number: 5 (lower is better)
Translates to: EWVAGSLQWPLDGRV*PFQLPGRSSQALVG
Trigger: GCCAACCAGGGCTTGGCTACTTCTGCCTGGAAGCTGAAAAGGCCAAACTCTACCATCGAGCGGCCATTGAAGACTACCTGCTACCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 90 bp GACTCTTCTGGGTACACTTCATGCTGGAAGCTCACTTTGCTGAGCTaGATCTCCATGAGGACCTGGTGTTGCCGTCCAATGCCACCCTGG +
Preference number: 5 (lower is better)
Translates to: DSSGYTSCWKLTLLS*ISMRTWCCRPMPPW
Trigger: CCAGGGTGGCATTGGACGGCAACACCAGGTCCTCATGGAGATCCAGCTCAGCAAAGTGAGCTTCCAGCATGAAGTGTACCCAGAAGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp CGTGAGACACGGAGAGACACTTGGCTGAGTGGGGTCCATGGGTCCAAAAGCCTCGAATCCGAGTCTAGCTaGAAGGCTGACTTGCACATC +
Preference number: 5 (lower is better)
Translates to: RETRRDTWLSGVHGSKSLESESS*KADLHI
Trigger: GATGTGCAAGTCAGCCTTCAAGCTAGACTCGGATTC...GAGGCTTTTGGACCCATGGACCCCACTCAGCCAAGTGTCTCTCCGTGTCTCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp CCACTCTCTCGGCCAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGGAATCCGAGTCTAGCTaGAAGGCTGACTTGCACATC +
Preference number: 5 (lower is better)
Translates to: PLSRPVGNKQAGQVSFTVESESS*KADLHI
Trigger: GATGTGCAAGTCAGCCTTCAAGCTAGACTCGGATTC...CACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp AGGCTGGGCAGGTATCCTTCACAGTGGCCATCCTTTGAAGGACCTGGTGGCCTAGCCACATGCAGTGCCTaGATGGTAAGCATGTTGGAG +
Preference number: 5 (lower is better)
Translates to: RLGRYPSQWPSFEGPGGLATCSA*MVSMLE
Trigger: CTCCAACATGCTTACCATCAAGGCACTGCATGTGGC...TAGGCCACCAGGTCCTTCAAAGGATGGCCACTGTGAAGGATACCTGCCCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS TCA 90 bp CTGCACTCGGACCTCCACAGCCACACTTCGATCCTCATCACCCAGTaGATGCTCCACCCTCACAACAGTGTTCAGGAAGGTCACCTTGAT +
Preference number: 5 (lower is better)
Translates to: LHSDLHSHTSILITQ*MLHPHNSVQEGHLD
Trigger: ATCAAGGTGACCTTCCTGAACACTGTTGTGAGGGTGGAGCATTCACTGGGTGATGAGGATCGAAGTGTGGCTGTGGAGGTCCGAGTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS GCA 90 bp ACTCGGACCTCCACAGCCACACTTCGATCCTCATCACCCAGTGAATaGTCCACCCTCACAACAGTGTTCAGGAAGGTCACCTTGATCCTC +
Preference number: 5 (lower is better)
Translates to: TRTSTATLRSSSPSE*STLTTVFRKVTLIL
Trigger: GAGGATCAAGGTGACCTTCCTGAACACTGTTGTGAGGGTGGAGCATTCACTGGGTGATGAGGATCGAAGTGTGGCTGTGGAGGTCCGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS CCA 90 bp ATGATCACATCCAGAGTACAGCGGGACAGTGCCAGTGTCCGGCTCTaGAATGTCCTCATCTCTTCAGGGTCTCCAGGGATCACCATTTCC +
Preference number: 5 (lower is better)
Translates to: MITSRVQRDSASVRL*NVLISSGSPGITIS
Trigger: GGAAATGGTGATCCCTGGAGACCCTGAAGAGATGAGGACATTCCAGAGCCGGACACTGGCACTGTCCCGCTGTACTCTGGATGTGATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 90 bp AATCGCCACTTGAGAGCATGGTCCTTGTGCGCATCTGGAAGGATCTaGTTACGCATGCCCCCTAGCACGTTGGATGTTGCCTCTGTTGCT +
Preference number: 5 (lower is better)
Translates to: NRHLRAWSLCASGRI*LRMPPSTLDVASVA
Trigger: AGCAACAGAGGCAACATCCAACGTGCTAGGGGGCATGCGTAACCAGATCCTTCCAGATGCGCACAAGGACCATGCTCTCAAGTGGCGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp CAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGGCCATCCTTTGAAGCATCCTGGTCCACATaGAGCCTCAGAGGCATCATG +
Preference number: 5 (lower is better)
Translates to: QLATSRLGRYPSQWPSFEASWST*SLRGIM
Trigger: CATGATGCCTCTGAGGCTCAATGTGGACCAGGATGC...TTCAAAGGATGGCCACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp GGACGTGGCCTGGGCTGGCGGTGGGCAAGTTTATTCCACTTCATGCAGACACTGCACATCACAGATGGTTaGAGCTGTATCCAGGATACC +
Preference number: 5 (lower is better)
Translates to: GRGLGWRWASLFHFMQTLHITDG*SCIQDT
Trigger: GGTATCCTGGATACAGCTCAAACCATCTGTGATGTG...CAGTGTCTGCATGAAGTGGAATAAACTTGCCCACCGCCAGCCCAGGCCACGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS-3UTR CAA 90 bp GCTGTGGGTCACAGCAATCAGGAAAACAGGGAGCTGGTGGCACCACTGTGGCTGCTAGCACGTTGGATGTaGCCTCTGTTGCTACGATTA +
Preference number: 5 (lower is better)
Translates to: AVGHSNQENRELVAPLWLLARWM*PLLLRL
Trigger: TAATCGTAGCAACAGAGGCAACATCCAACGTGCTAG...CAGCCACAGTGGTGCCACCAGCTCCCTGTTTTCCTGATTGCTGTGACCCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS TCA 90 bp GACTCCATTGACCTCAAAAACTCGTTCACAGACCAGGTTTCCAGGTaGATATCCCGCAGGGCAACGCTGCCCTTGTACAGATCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: DSIDLKNSFTDQVSR*ISRRATLPLYRSRL
Trigger: CAGCCTGGATCTGTACAAGGGCAGCGTTGCCCTGCGGGATATTCACCTGGAAACCTGGTCTGTGAACGAGTTTTTGAGGTCAATGGAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS-3UTR CAA 90 bp CAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGGCCATCCTTTGAATGCTGGAAGCTCACTTaGCTGAGCTGGATCTCCATG +
Preference number: 5 (lower is better)
Translates to: QLATSRLGRYPSQWPSFECWKLT*LSWISM
Trigger: CATGGAGATCCAGCTCAGCAAAGTGAGCTTCCAGCA...TTCAAAGGATGGCCACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 90 bp CACATGCAGTGCCTTGATGGTAAGCATGTTGGAGTGTGTGCGCCGTaGCAGCCGCTCACTCGTGTGCAAATGAAGAAACTTGTTGATCTT +
Preference number: 5 (lower is better)
Translates to: HMQCLDGKHVGVCAP*QPLTRVQMKKLVDL
Trigger: AAGATCAACAAGTTTCTTCATTTGCACACGAGTGAGCGGCTGCCACGGCGCACACACTCCAACATGCTTACCATCAAGGCACTGCATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 90 bp TGTGCGCATCTGGAAGGATCTGGTTACGCATGCCCCCTAGCACGTTaGATGTTGCCTCTGTTGCTACGATTATTGGTTTTACCACGGTTG +
Preference number: 5 (lower is better)
Translates to: CAHLEGSGYACPLAR*MLPLLLRLLVLPRL
Trigger: CAACCGTGGTAAAACCAATAATCGTAGCAACAGAGGCAACATCCAACGTGCTAGGGGGCATGCGTAACCAGATCCTTCCAGATGCGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS-3UTR CAA 90 bp CAGTTGGCAACAAGCAGGCTGGGCAGGTATCCTTCACAGTGGCCATCCTTTGAACTAGCACGTTGGATGTaGCCTCTGTTGCTACGATTA +
Preference number: 5 (lower is better)
Translates to: QLATSRLGRYPSQWPSFELARWM*PLLLRL
Trigger: TAATCGTAGCAACAGAGGCAACATCCAACGTGCTAG...TTCAAAGGATGGCCACTGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 72 bp GAGCGGAACTGGGGCTCACTCAGCTCCAGTCGCAGCTaGTCAGCCCGCACAGCCTGGCCAGCCCAGGGGTCC +
Preference number: 6 (lower is better)
Translates to: ERNWGSLSSSRS*SARTAWPAQGS
Trigger: GGACCCCTGGGCTGGCCAGGCTGTGCGGGCTGAGCAGCTGCGACTGGAGCTGAGTGAGCCCCAGTTCCGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 72 bp CTTCGGTGCTGCTTGTCCTCCGGCTGTGGCTGCCCGTaGGCAGCTCCCAGGACAGCTGCACGGCTGTGCCAG +
Preference number: 6 (lower is better)
Translates to: LRCCLSSGCGCP*AAPRTAARLCQ
Trigger: CTGGCACAGCCGTGCAGCTGTCCTGGGAGCTGCGCACGGGCAGCCACAGCCGGAGGACAAGCAGCACCGAAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 72 bp CTGTCTCTGTGTCCTCAGACTGCCCTTCCTGGGGGCTaGCGGGCCGGCTGTGGGTCTCTCGGGGAGCCTCAG +
Preference number: 6 (lower is better)
Translates to: LSLCPQTALPGG*RAGCGSLGEPQ
Trigger: CTGAGGCTCCCCGAGAGACCCACAGCCGGCCCGGCAGCCCCCAGGAAGGGCAGTCTGAGGACACAGAGACAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 72 bp CTCAGCTGCAGCAGCTTGTGCAGGAAGGCAGGCGGCTaGTGCACGTCCACAGGTGGGGCCTGGCTGGGGTCC +
Preference number: 6 (lower is better)
Translates to: LSCSSLCRKAGG*CTSTGGAWLGS
Trigger: GGACCCCAGCCAGGCCCCACCTGTGGACGTGCACCAGCCGCCTGCCTTCCTGCACAAGCTGCTGCAGCTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 72 bp AGCACCTGGCGCGACAGTGGTCGCTCGTCCAGCTCCTaGCCCAGGCCCCCAGCTATGGCCGACTCTTCTGGG +
Preference number: 6 (lower is better)
Translates to: STWRDSGRSSSS*PRPPAMADSSG
Trigger: CCCAGAAGAGTCGGCCATAGCTGGGGGCCTGGGCCAGGAGCTGGACGAGCGACCACTGTCGCGCCAGGTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 72 bp CCCGGAACCCTTGGAAGAGCTGCACAACCGAGTGCATaGGGCCCACGCCTCCCAGCAGGCCGGGCAGCTGGT +
Preference number: 6 (lower is better)
Translates to: PGTLGRAAQPSA*GPRLPAGRAAG
Trigger: ACCAGCTGCCCGGCCTGCTGGGAGGCGTGGGCCCCATGCACTCGGTTGTGCAGCTCTTCCAAGGGTTCCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 72 bp AGTGCACTTCGGTGCTGCTTGTCCTCCGGCTGTGGCTaGCCGTGCGCAGCTCCCAGGACAGCTGCACGGCTG +
Preference number: 6 (lower is better)
Translates to: SALRCCLSSGCG*PCAAPRTAARL
Trigger: CAGCCGTGCAGCTGTCCTGGGAGCTGCGCACGGGCAGCCACAGCCGGAGGACAAGCAGCACCGAAGTGCACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 72 bp CAGGCGGCTGGTGCACGTCCACAGGTGGGGCCTGGCTaGGGTCCCGCACTGCTTCGTCACAGTACTCCAGTC +
Preference number: 6 (lower is better)
Translates to: QAAGARPQVGPG*GPALLRHSTPV
Trigger: GACTGGAGTACTGTGACGAAGCAGTGCGGGACCCCAGCCAGGCCCCACCTGTGGACGTGCACCAGCCGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS CCA 72 bp AAGGCAGGCGGCTGGTGCACGTCCACAGGTGGGGCCTaGCTGGGGTCCCGCACTGCTTCGTCACAGTACTCC +
Preference number: 6 (lower is better)
Translates to: KAGGWCTSTGGA*LGSRTASSQYS
Trigger: GGAGTACTGTGACGAAGCAGTGCGGGACCCCAGCCAGGCCCCACCTGTGGACGTGCACCAGCCGCCTGCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS CCA 72 bp GACCGGCTCTTGAGCACCCGGCGAATGGTCTGTGTGTaGCGCAGATGGGCGCAGGGTCGGGCTGAGGCTTCG +
Preference number: 6 (lower is better)
Translates to: DRLLSTRRMVCV*RRWAQGRAEAS
Trigger: CGAAGCCTCAGCCCGACCCTGCGCCCATCTGCGCCACACACAGACCATTCGCCGGGTGCTCAAGAGCCGGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 72 bp TGCCACCCTGGGTACGCCAGGAGTTCTGGGGACGGTTaGGACCAGAGGAGCGGGAAGGTGAGACCCTGGGGC +
Preference number: 6 (lower is better)
Translates to: CHPGYARSSGDG*DQRSGKVRPWG
Trigger: GCCCCAGGGTCTCACCTTCCCGCTCCTCTGGTCCCAACCGTCCCCAGAACTCCTGGCGTACCCAGGGTGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 72 bp CGGCTGTGGCTGCCCGTGCGCAGCTCCCAGGACAGCTaGACGGCTGTGCCAGTTAACCGGACGTGGCTACAA +
Preference number: 6 (lower is better)
Translates to: RLWLPVRSSQDS*TAVPVNRTWLQ
Trigger: TTGTAGCCACGTCCGGTTAACTGGCACAGCCGTGCAGCTGTCCTGGGAGCTGCGCACGGGCAGCCACAGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 72 bp GCACTGGGAAGTGGGCAGGAGCGCGCAGCAGGTCAGTaGTTCCCAGGGGCTGGGAGAAGTGACCGTCGTGCA +
Preference number: 6 (lower is better)
Translates to: ALGSGQERAAGQ*FPGAGRSDRRA
Trigger: TGCACGACGGTCACTTCTCCCAGCCCCTGGGAAGCACTGACCTGCTGCGCGCTCCTGCCCACTTCCCAGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CAA 72 bp GCACCTCCAGCTGTCCAAAGTGCACTTCGGTGCTGCTaGTCCTCCGGCTGTGGCTGCCCGTGCGCAGCTCCC +
Preference number: 6 (lower is better)
Translates to: APPAVQSALRCC*SSGCGCPCAAP
Trigger: GGGAGCTGCGCACGGGCAGCCACAGCCGGAGGACAAGCAGCACCGAAGTGCACTTTGGACAGCTGGAGGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CAA 90 bp GGCACTCCAGCACCTCCAGCTGTCCAAAGTGCACTTCGGTGCTGCTaGTCCTCCGGCTGTGGCTGCCCGTGCGCAGCTCCCAGGACAGCT +
Preference number: 6 (lower is better)
Translates to: GTPAPPAVQSALRCC*SSGCGCPCAAPRTA
Trigger: AGCTGTCCTGGGAGCTGCGCACGGGCAGCCACAGCCGGAGGACAAGCAGCACCGAAGTGCACTTTGGACAGCTGGAGGTGCTGGAGTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 72 bp CACGTCCACAGGTGGGGCCTGGCTGGGGTCCCGCACTaGTTCGTCACAGTACTCCAGTCTCTGCACTCGGAC +
Preference number: 6 (lower is better)
Translates to: HVHRWGLAGVPH*FVTVLQSLHSD
Trigger: GTCCGAGTGCAGAGACTGGAGTACTGTGACGAAGCAGTGCGGGACCCCAGCCAGGCCCCACCTGTGGACGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS GCA 72 bp CCAGCACCTCCAGCTGTCCAAAGTGCACTTCGGTGCTaGTTGTCCTCCGGCTGTGGCTGCCCGTGCGCAGCT +
Preference number: 6 (lower is better)
Translates to: PAPPAVQSALRC*LSSGCGCPCAA
Trigger: AGCTGCGCACGGGCAGCCACAGCCGGAGGACAAGCAGCACCGAAGTGCACTTTGGACAGCTGGAGGTGCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 72 bp TGCCGTCCAATGCCACCCTGGGTACGCCAGGAGTTCTaGGGACGGTTGGGACCAGAGGAGCGGGAAGGTGAG +
Preference number: 6 (lower is better)
Translates to: CRPMPPWVRQEF*GRLGPEEREGE
Trigger: CTCACCTTCCCGCTCCTCTGGTCCCAACCGTCCCCAGAACTCCTGGCGTACCCAGGGTGGCATTGGACGGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CAA 90 bp GGCAGCTCCTCAAAGTATAGGCAGACCCCACTCAGCTGCAGCAGCTaGTGCAGGAAGGCAGGCGGCTGGTGCACGTCCACAGGTGGGGCC +
Preference number: 6 (lower is better)
Translates to: GSSSKYRQTPLSCSS*CRKAGGWCTSTGGA
Trigger: GGCCCCACCTGTGGACGTGCACCAGCCGCCTGCCTTCCTGCACAAGCTGCTGCAGCTGAGTGGGGTCTGCCTATACTTTGAGGAGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CAA 90 bp CACTCCGGCCCTCCGACGCTGCTGGTGGGAGCCACATGCAGTGCCTaGATGGTAAGCATGTTGGAGTGTGTGCGCCGTGGCAGCCGCTCA +
Preference number: 6 (lower is better)
Translates to: HSGPPTLLVGATCSA*MVSMLECVRRGSRS
Trigger: TGAGCGGCTGCCACGGCGCACACACTCCAACATGCTTACCATCAAGGCACTGCATGTGGCTCCCACCAGCAGCGTCGGAGGGCCGGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS TCA 72 bp GATTGGAAGTCGGCCAGGTCCAGGGACAGTTCTGAGTaGCAATGGCAGGCAGTGGAGCGCCGGGACCGGCTC +
Preference number: 6 (lower is better)
Translates to: DWKSARSRDSSE*QWQAVERRDRL
Trigger: GAGCCGGTCCCGGCGCTCCACTGCCTGCCATTGTCACTCAGAACTGTCCCTGGACCTGGCCGACTTCCAATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS TCA 72 bp AGTAGGCCAGCAGGTGGCTCAGAGGGTGTGGTGACTTaGCGGAACAAGGCAGCAAGGCGGTCCAGGGACCCC +
Preference number: 6 (lower is better)
Translates to: SRPAGGSEGVVT*RNKAARRSRDP
Trigger: GGGGTCCCTGGACCGCCTTGCTGCCTTGTTCCGTCAAGTCACCACACCCTCTGAGCCACCTGCTGGCCTACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 72 bp GCCGTAGGTCTGGGATGGGGAAGCGTAGCCTCAGGGTaGCCCGGGGTGCTGAGAGACGAAACACTGTCTGCA +
Preference number: 6 (lower is better)
Translates to: AVGLGWGSVASG*PGVLRDETLSA
Trigger: TGCAGACAGTGTTTCGTCTCTCAGCACCCCGGGCCACCCTGAGGCTACGCTTCCCCATCCCAGACCTACGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 72 bp CTGGGAGAAGTGACCGTCGTGCACGATGATGGGGCCTaGATGCAGCTGTGTCACGATGGGCTCCCCGTCTCG +
Preference number: 6 (lower is better)
Translates to: LGEVTVVHDDGA*MQLCHDGLPVS
Trigger: CGAGACGGGGAGCCCATCGTGACACAGCTGCATCCAGGCCCCATCATCGTGCACGACGGTCACTTCTCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 72 bp GTCGCTCGTCCAGCTCCTGGCCCAGGCCCCCAGCTATaGCCGACTCTTCTGGGTACACTTCATGCTGGAAGC +
Preference number: 6 (lower is better)
Translates to: VARPAPGPGPQL*PTLLGTLHAGS
Trigger: GCTTCCAGCATGAAGTGTACCCAGAAGAGTCGGCCATAGCTGGGGGCCTGGGCCAGGAGCTGGACGAGCGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CAA 72 bp TCCACACCCAGGAGCCCATGCCGGCAGCAGAGCCTCTaGAGCTTCAGCTCTGAGCAGTTGAGCTGGGCCAGG +
Preference number: 6 (lower is better)
Translates to: STPRSPCRQQSL*SFSSEQLSWAR
Trigger: CCTGGCCCAGCTCAACTGCTCAGAGCTGAAGCTCAAGAGGCTCTGCTGCCGGCATGGGCTCCTGGGTGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CAA 90 bp ACCAGCAGGGCGCAGGAGTCAGCACAGCTATGCACGTGCACCACGTaGTTGGAGCAGCGCAGCTCAAACAGAGGCTGGCTCAGTCTGCCC +
Preference number: 6 (lower is better)
Translates to: TSRAQESAQLCTCTT*LEQRSSNRGWLSLP
Trigger: GGGCAGACTGAGCCAGCCTCTGTTTGAGCTGCGCTGCTCCAACAACGTGGTGCACGTGCATAGCTGTGCTGACTCCTGCGCCCTGCTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS TCA 72 bp AGCTGCAAGCTTGTGGTCATGCATGAGGCCCAACTCTaGGAGTCCGCAGCCCCTGGTCCTGAACCCTGGCGG +
Preference number: 6 (lower is better)
Translates to: SCKLVVMHEAQL*ESAAPGPEPWR
Trigger: CCGCCAGGGTTCAGGACCAGGGGCTGCGGACTCTCAGAGTTGGGCCTCATGCATGACCACAAGCTTGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS TCA 72 bp TTGACGGCACTGAGCAGCCTCTGGAGCTGCTGGAGCTaGCGCGGGGTCAAAAGCAGGTGCAGGGATCCCAGT +
Preference number: 6 (lower is better)
Translates to: LTALSSLWSCWS*RGVKSRCRDPS
Trigger: ACTGGGATCCCTGCACCTGCTTTTGACCCCGCGTCAGCTCCAGCAGCTCCAGAGGCTGCTCAGTGCCGTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS TCA 72 bp TTCCCAGGGGCTGGGAGAAGTGACCGTCGTGCACGATaGTGGGGCCTGGATGCAGCTGTGTCACGATGGGCT +
Preference number: 6 (lower is better)
Translates to: FPGAGRSDRRAR*WGLDAAVSRWA
Trigger: AGCCCATCGTGACACAGCTGCATCCAGGCCCCATCATCGTGCACGACGGTCACTTCTCCCAGCCCCTGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS TCA 72 bp ACCCAAAGGAGGCAGCCCCACGCTGCAGCCCCCGAATaGGGCGCCCATCTTTCCTGTACTGCTCGATGGGTA +
Preference number: 6 (lower is better)
Translates to: TQRRQPHAAAPE*GAHLSCTARWV
Trigger: TACCCATCGAGCAGTACAGGAAAGATGGGCGCCTCATTCGGGGGCTGCAGCGTGGGGCTGCCTCCTTTGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 72 bp GGCCATAGGCACTCCAGCACCTCCAGCTGTCCAAAGTaGACTTCGGTGCTGCTTGTCCTCCGGCTGTGGCTG +
Preference number: 6 (lower is better)
Translates to: GHRHSSTSSCPK*TSVLLVLRLWL
Trigger: CAGCCACAGCCGGAGGACAAGCAGCACCGAAGTGCACTTTGGACAGCTGGAGGTGCTGGAGTGCCTATGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 72 bp AGGGTGGCCCGGGGTGCTGAGAGACGAAACACTGTCTaGAGCTCAGTGGCCTGTGGGGGCTCTGTTAGTAGG +
Preference number: 6 (lower is better)
Translates to: RVARGAERRNTV*SSVACGGSVSR
Trigger: CCTACTAACAGAGCCCCCACAGGCCACTGAGCTGCAGACAGTGTTTCGTCTCTCAGCACCCCGGGCCACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 72 bp CTCGAGGCGCAATGCCTAGGCCAGGGGCGTCAAGGATaGAGAACTCATCACTGTCCAGGGTGTCTCCGTCCC +
Preference number: 6 (lower is better)
Translates to: LEAQCLGQGRQG*RTHHCPGCLRP
Trigger: GGGACGGAGACACCCTGGACAGTGATGAGTTCTGCATCCTTGACGCCCCTGGCCTAGGCATTGCGCCTCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 72 bp GCTGTGTCACGATGGGCTCCCCGTCTCGAGGCGCAATaGCTAGGCCAGGGGCGTCAAGGATGCAGAACTCAT +
Preference number: 6 (lower is better)
Translates to: AVSRWAPRLEAQ*LGQGRQGCRTH
Trigger: ATGAGTTCTGCATCCTTGACGCCCCTGGCCTAGGCATTGCGCCTCGAGACGGGGAGCCCATCGTGACACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 72 bp TGCAGCCCCCGAATGAGGCGCCCATCTTTCCTGTACTaGTCGATGGGTAGCCACAGCAGGTCCCGGAACCCT +
Preference number: 6 (lower is better)
Translates to: CSPRMRRPSFLY*SMGSHSRSRNP
Trigger: AGGGTTCCGGGACCTGCTGTGGCTACCCATCGAGCAGTACAGGAAAGATGGGCGCCTCATTCGGGGGCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 72 bp CTACAAGGGCAGGCCCTCTGGAAGCGTGGCCTGAGATaGGAGAAGTCCCGGGAGCCGAATGGCCCATCTTTG +
Preference number: 6 (lower is better)
Translates to: LQGQALWKRGLR*EKSREPNGPSL
Trigger: CAAAGATGGGCCATTCGGCTCCCGGGACTTCTCCCATCTCAGGCCACGCTTCCAGAGGGCCTGCCCTTGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 72 bp TCCATGAGGACCTGGTGTTGCCGTCCAATGCCACCCTaGGTACGCCAGGAGTTCTGGGGACGGTTGGGACCA +
Preference number: 6 (lower is better)
Translates to: SMRTWCCRPMPP*VRQEFWGRLGP
Trigger: TGGTCCCAACCGTCCCCAGAACTCCTGGCGTACCCAGGGTGGCATTGGACGGCAACACCAGGTCCTCATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 72 bp AGCTGTGGCTACTGCCTGGAGCTTCCGGTGGGTTGCTaGCTGTCTCTGTGTCCTCAGACTGCCCTTCCTGGG +
Preference number: 6 (lower is better)
Translates to: SCGYCLELPVGC*LSLCPQTALPG
Trigger: CCCAGGAAGGGCAGTCTGAGGACACAGAGACAGCCAGCAACCCACCGGAAGCTCCAGGCAGTAGCCACAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 72 bp GTCAGAGGAGCTGTGGCTACTGCCTGGAGCTTCCGGTaGGTTGCTGGCTGTCTCTGTGTCCTCAGACTGCCC +
Preference number: 6 (lower is better)
Translates to: VRGAVATAWSFR*VAGCLCVLRLP
Trigger: GGGCAGTCTGAGGACACAGAGACAGCCAGCAACCCACCGGAAGCTCCAGGCAGTAGCCACAGCTCCTCTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CAA 72 bp CCTCCGACGCTGCTGGTGGGAGCCACATGCAGTGCCTaGATGGTAAGCATGTTGGAGTGTGTGCGCCGTGGC +
Preference number: 6 (lower is better)
Translates to: PPTLLVGATCSA*MVSMLECVRRG
Trigger: GCCACGGCGCACACACTCCAACATGCTTACCATCAAGGCACTGCATGTGGCTCCCACCAGCAGCGTCGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CAA 72 bp GAGGAGCTGTGGCTACTGCCTGGAGCTTCCGGTGGGTaGCTGGCTGTCTCTGTGTCCTCAGACTGCCCTTCC +
Preference number: 6 (lower is better)
Translates to: EELWLLPGASGG*LAVSVSSDCPS
Trigger: GGAAGGGCAGTCTGAGGACACAGAGACAGCCAGCAACCCACCGGAAGCTCCAGGCAGTAGCCACAGCTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CAA 90 bp ATGAGCCACAAGTCCTCAGCACCCAGTGGACGGCTCTTGTTCAGCTaGTCGGCCAGGCCTGCAGGGTCTGCAAGGTTGACGGCACTGAGC +
Preference number: 6 (lower is better)
Translates to: MSHKSSAPSGRLLFS*SARPAGSARLTALS
Trigger: GCTCAGTGCCGTCAACCTTGCAGACCCTGCAGGCCTGGCCGACAAGCTGAACAAGAGCCGTCCACTGGGTGCTGAGGACTTGTGGCTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CAA 90 bp AGCAGGGCGCAGGAGTCAGCACAGCTATGCACGTGCACCACGTTGTaGGAGCAGCGCAGCTCAAACAGAGGCTGGCTCAGTCTGCCCTCA +
Preference number: 6 (lower is better)
Translates to: SRAQESAQLCTCTTL*EQRSSNRGWLSLPS
Trigger: TGAGGGCAGACTGAGCCAGCCTCTGTTTGAGCTGCGCTGCTCCAACAACGTGGTGCACGTGCATAGCTGTGCTGACTCCTGCGCCCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS TCA 72 bp GCACTCTTGAGCCAGCTGCAAGCTTGTGGTCATGCATaGGGCCCAACTCTGAGAGTCCGCAGCCCCTGGTCC +
Preference number: 6 (lower is better)
Translates to: ALLSQLQACGHA*GPTLRVRSPWS
Trigger: GGACCAGGGGCTGCGGACTCTCAGAGTTGGGCCTCATGCATGACCACAAGCTTGCAGCTGGCTCAAGAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS TCA 72 bp GGTGGGGTTGAGGGTCGGTGGAAGGCCATGTTGCTGTaGACAGAGGAGCCCAGGTCTACGCTGTACACGGAG +
Preference number: 6 (lower is better)
Translates to: GGVEGRWKAMLL*TEEPRSTLYTE
Trigger: CTCCGTGTACAGCGTAGACCTGGGCTCCTCTGTTCACAGCAACATGGCCTTCCACCGACCCTCAACCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS TCA 72 bp ATCAGATTGGAAGTCGGCCAGGTCCAGGGACAGTTCTaGGTGACAATGGCAGGCAGTGGAGCGCCGGGACCG +
Preference number: 6 (lower is better)
Translates to: IRLEVGQVQGQF*VTMAGSGAPGP
Trigger: CGGTCCCGGCGCTCCACTGCCTGCCATTGTCACTCAGAACTGTCCCTGGACCTGGCCGACTTCCAATCTGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS TCA 72 bp CTGTTAGTAGGCCAGCAGGTGGCTCAGAGGGTGTGGTaGCTTGACGGAACAAGGCAGCAAGGCGGTCCAGGG +
Preference number: 6 (lower is better)
Translates to: LLVGQQVAQRVW*LDGTRQQGGPG
Trigger: CCCTGGACCGCCTTGCTGCCTTGTTCCGTCAAGTCACCACACCCTCTGAGCCACCTGCTGGCCTACTAACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS TCA 72 bp AGCACTGTCACCAGTGTGGAGAAGGTACTCTGGGACTaGCGACGGGAAGGTTCTGGGGCAGGTGTCTGGGGG +
Preference number: 6 (lower is better)
Translates to: STVTSVEKVLWD*RREGSGAGVWG
Trigger: CCCCCAGACACCTGCCCCAGAACCTTCCCGTCGTCAGTCCCAGAGTACCTTCTCCACACTGGTGACAGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS TCA 72 bp GCAGGTCACCCGAGCTGGTTAGGTACTGGAGCAGGTTaGCCAGCAGGGCGCAGGAGTCAGCACAGCTATGCA +
Preference number: 6 (lower is better)
Translates to: AGHPSWLGTGAG*PAGRRSQHSYA
Trigger: TGCATAGCTGTGCTGACTCCTGCGCCCTGCTGGTCAACCTGCTCCAGTACCTAACCAGCTCGGGTGACCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS TCA 72 bp TGGCCAGCCGGTCTCGGATCTCTAGCTCTTGAACAATaGGCACCTGGCGCGACAGTGGTCGCTCGTCCAGCT +
Preference number: 6 (lower is better)
Translates to: WPAGLGSLALEQ*APGATVVARPA
Trigger: AGCTGGACGAGCGACCACTGTCGCGCCAGGTGCTCATTGTTCAAGAGCTAGAGATCCGAGACCGGCTGGCCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS TCA 72 bp TTGGAGGTGGCCAGCCGGTCTCGGATCTCTAGCTCTTaGACAATGAGCACCTGGCGCGACAGTGGTCGCTCG +
Preference number: 6 (lower is better)
Translates to: LEVASRSRISSS*TMSTWRDSGRS
Trigger: CGAGCGACCACTGTCGCGCCAGGTGCTCATTGTTCAAGAGCTAGAGATCCGAGACCGGCTGGCCACCTCCAA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 72 bp AAGTATAGGCAGACCCCACTCAGCTGCAGCAGCTTGTaGAGGAAGGCAGGCGGCTGGTGCACGTCCACAGGT +
Preference number: 6 (lower is better)
Translates to: KYRQTPLSCSSL*RKAGGWCTSTG
Trigger: ACCTGTGGACGTGCACCAGCCGCCTGCCTTCCTGCACAAGCTGCTGCAGCTGAGTGGGGTCTGCCTATACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 72 bp ATGGTCCGCTTGGAGGAGAAGGGCGAGGGCTCAGGTTaGTGTAGCTCACACGGACTCTCGGTGGACAGCTCT +
Preference number: 6 (lower is better)
Translates to: MVRLEEKGEGSG*CSSHGLSVDSS
Trigger: AGAGCTGTCCACCGAGAGTCCGTGTGAGCTACAGCAACCTGAGCCCTCGCCCTTCTCCTCCAAGCGGACCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 72 bp AGGAGCTGTGGCTACTGCCTGGAGCTTCCGGTGGGTTaGTGGCTGTCTCTGTGTCCTCAGACTGCCCTTCCT +
Preference number: 6 (lower is better)
Translates to: RSCGYCLELPVG*WLSLCPQTALP
Trigger: AGGAAGGGCAGTCTGAGGACACAGAGACAGCCAGCAACCCACCGGAAGCTCCAGGCAGTAGCCACAGCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 72 bp CTGCCGATTTGCAGAGGTGGCTGTGGTGGGTCTGCCTaGGAGGGCAGCTCCTCAAAGTATAGGCAGACCCCA +
Preference number: 6 (lower is better)
Translates to: LPICRGGCGGSA*EGSSSKYRQTP
Trigger: TGGGGTCTGCCTATACTTTGAGGAGCTGCCCTCCCAGGCAGACCCACCACAGCCACCTCTGCAAATCGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 72 bp GGGGTGCTGAGAGACGAAACACTGTCTGCAGCTCAGTaGCCTGTGGGGGCTCTGTTAGTAGGCCAGCAGGTG +
Preference number: 6 (lower is better)
Translates to: GVLRDETLSAAQ*PVGALLVGQQV
Trigger: CACCTGCTGGCCTACTAACAGAGCCCCCACAGGCCACTGAGCTGCAGACAGTGTTTCGTCTCTCAGCACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 72 bp GATAGGCTGCTGGTCAGAGGAGCTGTGGCTACTGCCTaGAGCTTCCGGTGGGTTGCTGGCTGTCTCTGTGTC +
Preference number: 6 (lower is better)
Translates to: DRLLVRGAVATA*SFRWVAGCLCV
Trigger: GACACAGAGACAGCCAGCAACCCACCGGAAGCTCCAGGCAGTAGCCACAGCTCCTCTGACCAGCAGCCTATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CAA 72 bp AAGTCCTCAGCACCCAGTGGACGGCTCTTGTTCAGCTaGTCGGCCAGGCCTGCAGGGTCTGCAAGGTTGACG +
Preference number: 6 (lower is better)
Translates to: KSSAPSGRLLFS*SARPAGSARLT
Trigger: CGTCAACCTTGCAGACCCTGCAGGCCTGGCCGACAAGCTGAACAAGAGCCGTCCACTGGGTGCTGAGGACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CAA 72 bp ATGAGCCACAAGTCCTCAGCACCCAGTGGACGGCTCTaGTTCAGCTTGTCGGCCAGGCCTGCAGGGTCTGCA +
Preference number: 6 (lower is better)
Translates to: MSHKSSAPSGRL*FSLSARPAGSA
Trigger: TGCAGACCCTGCAGGCCTGGCCGACAAGCTGAACAAGAGCCGTCCACTGGGTGCTGAGGACTTGTGGCTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CAA 72 bp GCGCAGGAGTCAGCACAGCTATGCACGTGCACCACGTaGTTGGAGCAGCGCAGCTCAAACAGAGGCTGGCTC +
Preference number: 6 (lower is better)
Translates to: AQESAQLCTCTT*LEQRSSNRGWL
Trigger: GAGCCAGCCTCTGTTTGAGCTGCGCTGCTCCAACAACGTGGTGCACGTGCATAGCTGTGCTGACTCCTGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CAA 90 bp GAGGGACTCAGCCACAGCACCCGCCTGCAGCTGCTGGTTCAGATCTaGCTCAATGAGCCACAAGTCCTCAGCACCCAGTGGACGGCTCTT +
Preference number: 6 (lower is better)
Translates to: EGLSHSTRLQLLVQI*LNEPQVLSTQWTAL
Trigger: AAGAGCCGTCCACTGGGTGCTGAGGACTTGTGGCTCATTGAGCAAGATCTGAACCAGCAGCTGCAGGCGGGTGCTGTGGCTGAGTCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CAA 90 bp CTGGAAGCTCACTTTGCTGAGCTGGATCTCCATGAGGACCTGGTGTaGCCGTCCAATGCCACCCTGGGTACGCCAGGAGTTCTGGGGACG +
Preference number: 6 (lower is better)
Translates to: LEAHFAELDLHEDLV*PSNATLGTPGVLGT
Trigger: CGTCCCCAGAACTCCTGGCGTACCCAGGGTGGCATTGGACGGCAACACCAGGTCCTCATGGAGATCCAGCTCAGCAAAGTGAGCTTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS TCA 72 bp CGGAGAGCTCAGAGACAGCCGATGTCACACTGCTTGTaGGGCCGGCCATGGAGAAGAAGAGGTCCGTGCTGT +
Preference number: 6 (lower is better)
Translates to: RRAQRQPMSHCL*GRPWRRRGPCC
Trigger: ACAGCACGGACCTCTTCTTCTCCATGGCCGGCCTCACAAGCAGTGTGACATCGGCTGTCTCTGAGCTCTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 72 bp GAAGGCACTCTTGAGCCAGCTGCAAGCTTGTGGTCATaGATGAGGCCCAACTCTGAGAGTCCGCAGCCCCTG +
Preference number: 6 (lower is better)
Translates to: EGTLEPAASLWS*MRPNSESPQPL
Trigger: CAGGGGCTGCGGACTCTCAGAGTTGGGCCTCATGCATGACCACAAGCTTGCAGCTGGCTCAAGAGTGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS GCA 72 bp GGGTCCCGCACTGCTTCGTCACAGTACTCCAGTCTCTaGACTCGGACCTCCACAGCCACACTTCGATCCTCA +
Preference number: 6 (lower is better)
Translates to: GSRTASSQYSSL*TRTSTATLRSS
Trigger: TGAGGATCGAAGTGTGGCTGTGGAGGTCCGAGTGCAGAGACTGGAGTACTGTGACGAAGCAGTGCGGGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS GCA 72 bp GATACCTCCAACTTGGGGCCTGGAAAGGCCTCGTTCTaGTTCAGCCTCACCATGAGCTCCACGTACCCCGTG +
Preference number: 6 (lower is better)
Translates to: DTSNLGPGKASF*FSLTMSSTYPV
Trigger: CACGGGGTACGTGGAGCTCATGGTGAGGCTGAAGCAGAACGAGGCCTTTCCAGGCCCCAAGTTGGAGGTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 72 bp GCCACAGCACCCGCCTGCAGCTGCTGGTTCAGATCTTaGTCAATGAGCCACAAGTCCTCAGCACCCAGTGGA +
Preference number: 6 (lower is better)
Translates to: ATAPACSCWFRS*SMSHKSSAPSG
Trigger: TCCACTGGGTGCTGAGGACTTGTGGCTCATTGAGCAAGATCTGAACCAGCAGCTGCAGGCGGGTGCTGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 72 bp AGTGGGGTGGGGTTGAGGGTCGGTGGAAGGCCATGTTaGTGTGAACAGAGGAGCCCAGGTCTACGCTGTACA +
Preference number: 6 (lower is better)
Translates to: SGVGLRVGGRPC*CEQRSPGLRCT
Trigger: TGTACAGCGTAGACCTGGGCTCCTCTGTTCACAGCAACATGGCCTTCCACCGACCCTCAACCCCACCCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 72 bp GATCCCGGCCTTTCTCATAGGCTGTCTCCCACTGTGTaGCACTGGACTGGGGGTTCAGGGTCACCACTACCT +
Preference number: 6 (lower is better)
Translates to: DPGLSHRLSPTV*HWTGGSGSPLP
Trigger: AGGTAGTGGTGACCCTGAACCCCCAGTCCAGTGGCACACAGTGGGAGACAGCCTATGAGAAAGGCCGGGATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 72 bp ACCAGCAGGGCGCAGGAGTCAGCACAGCTATGCACGTaGACCACGTTGTTGGAGCAGCGCAGCTCAAACAGA +
Preference number: 6 (lower is better)
Translates to: TSRAQESAQLCT*TTLLEQRSSNR
Trigger: TCTGTTTGAGCTGCGCTGCTCCAACAACGTGGTGCACGTGCATAGCTGTGCTGACTCCTGCGCCCTGCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 72 bp AGTACTTGGCCTCAGTGCTCCTGGGATTCAGAGCTTTaGAGACCCGCAGGCAGGGGACTGGTGGCTTCTCTC +
Preference number: 6 (lower is better)
Translates to: STWPQCSWDSEL*RPAGRGLVASL
Trigger: GAGAGAAGCCACCAGTCCCCTGCCTGCGGGTCTCCAAAGCTCTGAATCCCAGGAGCACTGAGGCCAAGTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 72 bp CTCCTGGCCCAGGCCCCCAGCTATGGCCGACTCTTCTaGGTACACTTCATGCTGGAAGCTCACTTTGCTGAG +
Preference number: 6 (lower is better)
Translates to: LLAQAPSYGRLF*VHFMLEAHFAE
Trigger: CTCAGCAAAGTGAGCTTCCAGCATGAAGTGTACCCAGAAGAGTCGGCCATAGCTGGGGGCCTGGGCCAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CAA 72 bp TCAAAGTATAGGCAGACCCCACTCAGCTGCAGCAGCTaGTGCAGGAAGGCAGGCGGCTGGTGCACGTCCACA +
Preference number: 6 (lower is better)
Translates to: SKYRQTPLSCSS*CRKAGGWCTST
Trigger: TGTGGACGTGCACCAGCCGCCTGCCTTCCTGCACAAGCTGCTGCAGCTGAGTGGGGTCTGCCTATACTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CAA 72 bp AGCCACAGCACCCGCCTGCAGCTGCTGGTTCAGATCTaGCTCAATGAGCCACAAGTCCTCAGCACCCAGTGG +
Preference number: 6 (lower is better)
Translates to: SHSTRLQLLVQI*LNEPQVLSTQW
Trigger: CCACTGGGTGCTGAGGACTTGTGGCTCATTGAGCAAGATCTGAACCAGCAGCTGCAGGCGGGTGCTGTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CAA 72 bp CCGGCCATGGAGAAGAAGAGGTCCGTGCTGTCCAAATaGAGGGGGTTGGTGATGGGGTACAGGCTGAGGGAC +
Preference number: 6 (lower is better)
Translates to: PAMEKKRSVLSK*RGLVMGYRLRD
Trigger: GTCCCTCAGCCTGTACCCCATCACCAACCCCCTCAATTTGGACAGCACGGACCTCTTCTTCTCCATGGCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CAA 72 bp GAATCCGAGTCTAGCTTGAAGGCTGACTTGCACATCTaGAACCCCGAAGAGCCAGGCGGCCGAGCAGCAGCG +
Preference number: 6 (lower is better)
Translates to: ESESSLKADLHI*NPEEPGGRAAA
Trigger: CGCTGCTGCTCGGCCGCCTGGCTCTTCGGGGTTCAAGATGTGCAAGTCAGCCTTCAAGCTAGACTCGGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CAA 90 bp TCTTGCTCAATGAGCCACAAGTCCTCAGCACCCAGTGGACGGCTCTaGTTCAGCTTGTCGGCCAGGCCTGCAGGGTCTGCAAGGTTGACG +
Preference number: 6 (lower is better)
Translates to: SCSMSHKSSAPSGRL*FSLSARPAGSARLT
Trigger: CGTCAACCTTGCAGACCCTGCAGGCCTGGCCGACAAGCTGAACAAGAGCCGTCCACTGGGTGCTGAGGACTTGTGGCTCATTGAGCAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CAA 90 bp GGGTCTCCAGGGATCACCATTTCCTCAGTCTCGTACATGGTCCGCTaGGAGGAGAAGGGCGAGGGCTCAGGTTGCTGTAGCTCACACGGA +
Preference number: 6 (lower is better)
Translates to: GSPGITISSVSYMVR*EEKGEGSGCCSSHG
Trigger: TCCGTGTGAGCTACAGCAACCTGAGCCCTCGCCCTTCTCCTCCAAGCGGACCATGTACGAGACTGAGGAAATGGTGATCCCTGGAGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CAA 90 bp TGGGCGTCTTCTTCATCTGAATCCGAGTCTAGCTTGAAGGCTGACTaGCACATCTTGAACCCCGAAGAGCCAGGCGGCCGAGCAGCAGCG +
Preference number: 6 (lower is better)
Translates to: WASSSSESESSLKAD*HILNPEEPGGRAAA
Trigger: CGCTGCTGCTCGGCCGCCTGGCTCTTCGGGGTTCAAGATGTGCAAGTCAGCCTTCAAGCTAGACTCGGATTCAGATGAAGAAGACGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CAA 90 bp GAGTTTGGCCTTTTCAGCTTCCAGGCAGAAGTAGCCAAGCCCTGGTaGGCCACGGTACTGGGCTACGCTGAAGATGGTGCCTTGCTCCAC +
Preference number: 6 (lower is better)
Translates to: EFGLFSFQAEVAKPW*ATVLGYAEDGALLH
Trigger: GTGGAGCAAGGCACCATCTTCAGCGTAGCCCAGTACCGTGGCCAACCAGGGCTTGGCTACTTCTGCCTGGAAGCTGAAAAGGCCAAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS TCA 72 bp TCTGAGGGTTCTGGCAACCCTTCCCGAAGGCACTCTTaGGCCAGCTGCAAGCTTGTGGTCATGCATGAGGCC +
Preference number: 6 (lower is better)
Translates to: SEGSGNPSRRHS*ASCKLVVMHEA
Trigger: GGCCTCATGCATGACCACAAGCTTGCAGCTGGCTCAAGAGTGCCTTCGGGAAGGGTTGCCAGAACCCTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS TCA 72 bp ACGGGAAGGTTCTGGGGCAGGTGTCTGGGGGACACCTaGTGCCATCGAGAAGAACTGGGCGTCTTCTTCATC +
Preference number: 6 (lower is better)
Translates to: TGRFWGRCLGDT*CHREELGVFFI
Trigger: GATGAAGAAGACGCCCAGTTCTTCTCGATGGCATCAGGTGTCCCCCAGACACCTGCCCCAGAACCTTCCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS TCA 72 bp GAAGGCCAAAGTCTCTACCCCCATAGAGGTGCCAGATaGAGGAGACCTCCCGTAGTACCACACGGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: EGQSLYPHRGAR*RRPPVVPHGCW
Trigger: CCAGCAGCCGTGTGGTACTACGGGAGGTCTCCTTCATCTGGCACCTCTATGGGGGTAGAGACTTTGGCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 72 bp CACCTTGATCCTCCGGAGCACAGTCTCAATGGTCTGTaGAAACATTTCCAGCCCCTCCAGGGGCTGTGGTGG +
Preference number: 6 (lower is better)
Translates to: HLDPPEHSLNGL*KHFQPLQGLWW
Trigger: CCACCACAGCCCCTGGAGGGGCTGGAAATGTTTGCACAGACCATTGAGACTGTGCTCCGGAGGATCAAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS GCA 72 bp ACTTTGCTGAGCTGGATCTCCATGAGGACCTGGTGTTaGCGTCCAATGCCACCCTGGGTACGCCAGGAGTTC +
Preference number: 6 (lower is better)
Translates to: TLLSWISMRTWC*RPMPPWVRQEF
Trigger: GAACTCCTGGCGTACCCAGGGTGGCATTGGACGGCAACACCAGGTCCTCATGGAGATCCAGCTCAGCAAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 72 bp GCCTCCTCCAATCGCCACTTGAGAGCATGGTCCTTGTaGGCATCTGGAAGGATCTGGTTACGCATGCCCCCT +
Preference number: 6 (lower is better)
Translates to: ASSNRHLRAWSL*ASGRIWLRMPP
Trigger: AGGGGGCATGCGTAACCAGATCCTTCCAGATGCGCACAAGGACCATGCTCTCAAGTGGCGATTGGAGGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 72 bp CTTCCCGAAGGCACTCTTGAGCCAGCTGCAAGCTTGTaGTCATGCATGAGGCCCAACTCTGAGAGTCCGCAG +
Preference number: 6 (lower is better)
Translates to: LPEGTLEPAASL*SCMRPNSESPQ
Trigger: CTGCGGACTCTCAGAGTTGGGCCTCATGCATGACCACAAGCTTGCAGCTGGCTCAAGAGTGCCTTCGGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS CCA 72 bp ATCTTGCTCAATGAGCCACAAGTCCTCAGCACCCAGTaGACGGCTCTTGTTCAGCTTGTCGGCCAGGCCTGC +
Preference number: 6 (lower is better)
Translates to: ILLNEPQVLSTQ*TALVQLVGQAC
Trigger: GCAGGCCTGGCCGACAAGCTGAACAAGAGCCGTCCACTGGGTGCTGAGGACTTGTGGCTCATTGAGCAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 72 bp GGCCTTTCTCATAGGCTGTCTCCCACTGTGTGCCACTaGACTGGGGGTTCAGGGTCACCACTACCTGAGGTA +
Preference number: 6 (lower is better)
Translates to: GLSHRLSPTVCH*TGGSGSPLPEV
Trigger: TACCTCAGGTAGTGGTGACCCTGAACCCCCAGTCCAGTGGCACACAGTGGGAGACAGCCTATGAGAAAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 72 bp AGGGCTCAGGTTGCTGTAGCTCACACGGACTCTCGGTaGACAGCTCTAGATCCCGGCCTTTCTCATAGGCTG +
Preference number: 6 (lower is better)
Translates to: RAQVAVAHTDSR*TALDPGLSHRL
Trigger: CAGCCTATGAGAAAGGCCGGGATCTAGAGCTGTCCACCGAGAGTCCGTGTGAGCTACAGCAACCTGAGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 72 bp GGTCTCCAGGGATCACCATTTCCTCAGTCTCGTACATaGTCCGCTTGGAGGAGAAGGGCGAGGGCTCAGGTT +
Preference number: 6 (lower is better)
Translates to: GLQGSPFPQSRT*SAWRRRARAQV
Trigger: AACCTGAGCCCTCGCCCTTCTCCTCCAAGCGGACCATGTACGAGACTGAGGAAATGGTGATCCCTGGAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 72 bp TCCAGAGTACAGCGGGACAGTGCCAGTGTCCGGCTCTaGAATGTCCTCATCTCTTCAGGGTCTCCAGGGATC +
Preference number: 6 (lower is better)
Translates to: SRVQRDSASVRL*NVLISSGSPGI
Trigger: GATCCCTGGAGACCCTGAAGAGATGAGGACATTCCAGAGCCGGACACTGGCACTGTCCCGCTGTACTCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 72 bp GGCCTTTTCAGCTTCCAGGCAGAAGTAGCCAAGCCCTaGTTGGCCACGGTACTGGGCTACGCTGAAGATGGT +
Preference number: 6 (lower is better)
Translates to: GLFSFQAEVAKP*LATVLGYAEDG
Trigger: ACCATCTTCAGCGTAGCCCAGTACCGTGGCCAACCAGGGCTTGGCTACTTCTGCCTGGAAGCTGAAAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 72 bp AGGAGTCAGCACAGCTATGCACGTGCACCACGTTGTTaGAGCAGCGCAGCTCAAACAGAGGCTGGCTCAGTC +
Preference number: 6 (lower is better)
Translates to: RSQHSYARAPRC*SSAAQTEAGSV
Trigger: GACTGAGCCAGCCTCTGTTTGAGCTGCGCTGCTCCAACAACGTGGTGCACGTGCATAGCTGTGCTGACTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 72 bp CAGTCCTGGGCCTCCTCCAATCGCCACTTGAGAGCATaGTCCTTGTGCGCATCTGGAAGGATCTGGTTACGC +
Preference number: 6 (lower is better)
Translates to: QSWASSNRHLRA*SLCASGRIWLR
Trigger: GCGTAACCAGATCCTTCCAGATGCGCACAAGGACCATGCTCTCAAGTGGCGATTGGAGGAGGCCCAGGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CAA 72 bp GGGATCACCATTTCCTCAGTCTCGTACATGGTCCGCTaGGAGGAGAAGGGCGAGGGCTCAGGTTGCTGTAGC +
Preference number: 6 (lower is better)
Translates to: GITISSVSYMVR*EEKGEGSGCCS
Trigger: GCTACAGCAACCTGAGCCCTCGCCCTTCTCCTCCAAGCGGACCATGTACGAGACTGAGGAAATGGTGATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CAA 72 bp CTTTTCAGCTTCCAGGCAGAAGTAGCCAAGCCCTGGTaGGCCACGGTACTGGGCTACGCTGAAGATGGTGCC +
Preference number: 6 (lower is better)
Translates to: LFSFQAEVAKPW*ATVLGYAEDGA
Trigger: GGCACCATCTTCAGCGTAGCCCAGTACCGTGGCCAACCAGGGCTTGGCTACTTCTGCCTGGAAGCTGAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CAA 72 bp CAGGAGTCAGCACAGCTATGCACGTGCACCACGTTGTaGGAGCAGCGCAGCTCAAACAGAGGCTGGCTCAGT +
Preference number: 6 (lower is better)
Translates to: QESAQLCTCTTL*EQRSSNRGWLS
Trigger: ACTGAGCCAGCCTCTGTTTGAGCTGCGCTGCTCCAACAACGTGGTGCACGTGCATAGCTGTGCTGACTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CAA 72 bp CACTTTGCTGAGCTGGATCTCCATGAGGACCTGGTGTaGCCGTCCAATGCCACCCTGGGTACGCCAGGAGTT +
Preference number: 6 (lower is better)
Translates to: HFAELDLHEDLV*PSNATLGTPGV
Trigger: AACTCCTGGCGTACCCAGGGTGGCATTGGACGGCAACACCAGGTCCTCATGGAGATCCAGCTCAGCAAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CAA 72 bp TGGGCCTCCTCCAATCGCCACTTGAGAGCATGGTCCTaGTGCGCATCTGGAAGGATCTGGTTACGCATGCCC +
Preference number: 6 (lower is better)
Translates to: WASSNRHLRAWS*CASGRIWLRMP
Trigger: GGGCATGCGTAACCAGATCCTTCCAGATGCGCACAAGGACCATGCTCTCAAGTGGCGATTGGAGGAGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 72 bp GGGATTCAGAGCTTTGGAGACCCGCAGGCAGGGGACTaGTGGCTTCTCTCCATCTTCGTAGATTCCTTGCAG +
Preference number: 6 (lower is better)
Translates to: GIQSFGDPQAGD*WLLSIFVDSLQ
Trigger: CTGCAAGGAATCTACGAAGATGGAGAGAAGCCACCAGTCCCCTGCCTGCGGGTCTCCAAAGCTCTGAATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 72 bp GGATCACCATTTCCTCAGTCTCGTACATGGTCCGCTTaGAGGAGAAGGGCGAGGGCTCAGGTTGCTGTAGCT +
Preference number: 6 (lower is better)
Translates to: GSPFPQSRTWSA*RRRARAQVAVA
Trigger: AGCTACAGCAACCTGAGCCCTCGCCCTTCTCCTCCAAGCGGACCATGTACGAGACTGAGGAAATGGTGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CAA 72 bp GAGAAGAAGAGGTCCGTGCTGTCCAAATTGAGGGGGTaGGTGATGGGGTACAGGCTGAGGGACTCAGCCACA +
Preference number: 6 (lower is better)
Translates to: EKKRSVLSKLRG*VMGYRLRDSAT
Trigger: TGTGGCTGAGTCCCTCAGCCTGTACCCCATCACCAACCCCCTCAATTTGGACAGCACGGACCTCTTCTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CAA 72 bp TCAGTATCCAGAAGGGCGTCAGTCAGGTCTCGTTGGTaGATGAGGGCTGTCTCCACAGGTAGGCATGAGGGC +
Preference number: 6 (lower is better)
Translates to: SVSRRASVRSRW*MRAVSTGRHEG
Trigger: GCCCTCATGCCTACCTGTGGAGACAGCCCTCATCAACCAACGAGACCTGACTGACGCCCTTCTGGATACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CAA 90 bp GGGACCATGGGGTTGATACTGGCTGCTAGGCTGGTGAAAAAGTCCTaGAGGAAGAAGAGGGCATCCTGGTCCACATTGAGCCTCAGAGGC +
Preference number: 6 (lower is better)
Translates to: GTMGLILAARLVKKS*RKKRASWSTLSLRG
Trigger: GCCTCTGAGGCTCAATGTGGACCAGGATGCCCTCTTCTTCCTCAAGGACTTTTTCACCAGCCTAGCAGCCAGTATCAACCCCATGGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS TCA 72 bp ATGGTGCCTTGCTCCACATCTAGTACCAGCTCCCCGTaGGTGACATCCAGCCGCTTCCCTGTCTCATCCTTA +
Preference number: 6 (lower is better)
Translates to: MVPCSTSSTSSP*VTSSRFPVSSL
Trigger: TAAGGATGAGACAGGGAAGCGGCTGGATGTCACTCACGGGGAGCTGGTACTAGATGTGGAGCAAGGCACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 72 bp TCACCACTACCTGAGGTAGAAAGTACTTGGCCTCAGTaGTCCTGGGATTCAGAGCTTTGGAGACCCGCAGGC +
Preference number: 6 (lower is better)
Translates to: SPLPEVESTWPQ*SWDSELWRPAG
Trigger: GCCTGCGGGTCTCCAAAGCTCTGAATCCCAGGAGCACTGAGGCCAAGTACTTTCTACCTCAGGTAGTGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 72 bp ACTGGGCATGATCACATCCAGAGTACAGCGGGACAGTaGCAGTGTCCGGCTCTGGAATGTCCTCATCTCTTC +
Preference number: 6 (lower is better)
Translates to: TGHDHIQSTAGQ*QCPALECPHLF
Trigger: GAAGAGATGAGGACATTCCAGAGCCGGACACTGGCACTGTCCCGCTGTACTCTGGATGTGATCATGCCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 72 bp CGTTCAGTATCCAGAAGGGCGTCAGTCAGGTCTCGTTaGTTGATGAGGGCTGTCTCCACAGGTAGGCATGAG +
Preference number: 6 (lower is better)
Translates to: RSVSRRASVRSR*LMRAVSTGRHE
Trigger: CTCATGCCTACCTGTGGAGACAGCCCTCATCAACCAACGAGACCTGACTGACGCCCTTCTGGATACTGAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 72 bp TTGAGAGCATGGTCCTTGTGCGCATCTGGAAGGATCTaGTTACGCATGCCCCCTAGCACGTTGGATGTTGCC +
Preference number: 6 (lower is better)
Translates to: LRAWSLCASGRI*LRMPPSTLDVA
Trigger: GGCAACATCCAACGTGCTAGGGGGCATGCGTAACCAGATCCTTCCAGATGCGCACAAGGACCATGCTCTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS TCA 72 bp GCTCCACCCTCACAACAGTGTTCAGGAAGGTCACCTTaGTCCTCCGGAGCACAGTCTCAATGGTCTGTGCAA +
Preference number: 6 (lower is better)
Translates to: APPSQQCSGRSP*SSGAQSQWSVQ
Trigger: TTGCACAGACCATTGAGACTGTGCTCCGGAGGATCAAGGTGACCTTCCTGAACACTGTTGTGAGGGTGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS TCA 72 bp GACCTCCACAGCCACACTTCGATCCTCATCACCCAGTaGATGCTCCACCCTCACAACAGTGTTCAGGAAGGT +
Preference number: 6 (lower is better)
Translates to: DLHSHTSILITQ*MLHPHNSVQEG
Trigger: ACCTTCCTGAACACTGTTGTGAGGGTGGAGCATTCACTGGGTGATGAGGATCGAAGTGTGGCTGTGGAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS TCA 72 bp GCAGCCGCTCACTCGTGTGCAAATGAAGAAACTTGTTaGTCTTGGAGGTGGCCAGCCGGTCTCGGATCTCTA +
Preference number: 6 (lower is better)
Translates to: AAAHSCANEETC*SWRWPAGLGSL
Trigger: TAGAGATCCGAGACCGGCTGGCCACCTCCAAGATCAACAAGTTTCTTCATTTGCACACGAGTGAGCGGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS GCA 72 bp TCCACAGCCACACTTCGATCCTCATCACCCAGTGAATaGTCCACCCTCACAACAGTGTTCAGGAAGGTCACC +
Preference number: 6 (lower is better)
Translates to: STATLRSSSPSE*STLTTVFRKVT
Trigger: GGTGACCTTCCTGAACACTGTTGTGAGGGTGGAGCATTCACTGGGTGATGAGGATCGAAGTGTGGCTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS CCA 72 bp GGTGTCTGGGGGACACCTGATGCCATCGAGAAGAACTaGGCGTCTTCTTCATCTGAATCCGAGTCTAGCTTG +
Preference number: 6 (lower is better)
Translates to: GVWGTPDAIEKN*ASSSSESESSL
Trigger: CAAGCTAGACTCGGATTCAGATGAAGAAGACGCCCAGTTCTTCTCGATGGCATCAGGTGTCCCCCAGACACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 72 bp GCAGGTAGTCTTCAATGGCCGCTCGATGGTAGAGTTTaGCCTTTTCAGCTTCCAGGCAGAAGTAGCCAAGCC +
Preference number: 6 (lower is better)
Translates to: AGSLQWPLDGRV*PFQLPGRSSQA
Trigger: GGCTTGGCTACTTCTGCCTGGAAGCTGAAAAGGCCAAACTCTACCATCGAGCGGCCATTGAAGACTACCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 72 bp GGGTACACTTCATGCTGGAAGCTCACTTTGCTGAGCTaGATCTCCATGAGGACCTGGTGTTGCCGTCCAATG +
Preference number: 6 (lower is better)
Translates to: GYTSCWKLTLLS*ISMRTWCCRPM
Trigger: CATTGGACGGCAACACCAGGTCCTCATGGAGATCCAGCTCAGCAAAGTGAGCTTCCAGCATGAAGTGTACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CAA 72 bp TGCTCCACCCTCACAACAGTGTTCAGGAAGGTCACCTaGATCCTCCGGAGCACAGTCTCAATGGTCTGTGCA +
Preference number: 6 (lower is better)
Translates to: CSTLTTVFRKVT*ILRSTVSMVCA
Trigger: TGCACAGACCATTGAGACTGTGCTCCGGAGGATCAAGGTGACCTTCCTGAACACTGTTGTGAGGGTGGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS CAA 72 bp TCTTCATCTGAATCCGAGTCTAGCTTGAAGGCTGACTaGCACATCTTGAACCCCGAAGAGCCAGGCGGCCGA +
Preference number: 6 (lower is better)
Translates to: SSSESESSLKAD*HILNPEEPGGR
Trigger: TCGGCCGCCTGGCTCTTCGGGGTTCAAGATGTGCAAGTCAGCCTTCAAGCTAGACTCGGATTCAGATGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CAA 72 bp CTGCTCATGGCCCCTGGATGCCACATCACAGATGGTTaGAGCTGTATCCAGGATACCCTCTCGAACAGCATC +
Preference number: 6 (lower is better)
Translates to: LLMAPGCHITDG*SCIQDTLSNSI
Trigger: GATGCTGTTCGAGAGGGTATCCTGGATACAGCTCAAACCATCTGTGATGTGGCATCCAGGGGCCATGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CAA 90 bp ATCGAGAAGAACTGGGCGTCTTCTTCATCTGAATCCGAGTCTAGCTaGAAGGCTGACTTGCACATCTTGAACCCCGAAGAGCCAGGCGGC +
Preference number: 6 (lower is better)
Translates to: IEKNWASSSSESESS*KADLHILNPEEPGG
Trigger: GCCGCCTGGCTCTTCGGGGTTCAAGATGTGCAAGTCAGCCTTCAAGCTAGACTCGGATTCAGATGAAGAAGACGCCCAGTTCTTCTCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS TCA 72 bp GACCTCAAAAACTCGTTCACAGACCAGGTTTCCAGGTaGATATCCCGCAGGGCAACGCTGCCCTTGTACAGA +
Preference number: 6 (lower is better)
Translates to: DLKNSFTDQVSR*ISRRATLPLYR
Trigger: TCTGTACAAGGGCAGCGTTGCCCTGCGGGATATTCACCTGGAAACCTGGTCTGTGAACGAGTTTTTGAGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS TCA 72 bp TGCTCATGGCCCCTGGATGCCACATCACAGATGGTTTaGGCTGTATCCAGGATACCCTCTCGAACAGCATCA +
Preference number: 6 (lower is better)
Translates to: CSWPLDATSQMV*AVSRIPSRTAS
Trigger: TGATGCTGTTCGAGAGGGTATCCTGGATACAGCTCAAACCATCTGTGATGTGGCATCCAGGGGCCATGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 72 bp GGTTCAGGGTCACCACTACCTGAGGTAGAAAGTACTTaGCCTCAGTGCTCCTGGGATTCAGAGCTTTGGAGA +
Preference number: 6 (lower is better)
Translates to: GSGSPLPEVEST*PQCSWDSELWR
Trigger: TCTCCAAAGCTCTGAATCCCAGGAGCACTGAGGCCAAGTACTTTCTACCTCAGGTAGTGGTGACCCTGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 72 bp AGCTCTGTTCAGGTGGGGCCATGTAGTGGCGTAGAGTaGCTTTGTGCAGCCGTACTGTCACCAAAAATTCCT +
Preference number: 6 (lower is better)
Translates to: SSVQVGPCSGVE*LCAAVLSPKIP
Trigger: AGGAATTTTTGGTGACAGTACGGCTGCACAAAGCCACTCTACGCCACTACATGGCCCCACCTGAACAGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CCA 72 bp TGCCTTGATGGTAAGCATGTTGGAGTGTGTGCGCCGTaGCAGCCGCTCACTCGTGTGCAAATGAAGAAACTT +
Preference number: 6 (lower is better)
Translates to: CLDGKHVGVCAP*QPLTRVQMKKL
Trigger: AAGTTTCTTCATTTGCACACGAGTGAGCGGCTGCCACGGCGCACACACTCCAACATGCTTACCATCAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CAA 72 bp TGGCTCAGTCTGCCCTCAGTGCTGCCCTTCCAGGTTTaGATGACAAGTTCCAGGAGGTCAATATCCAGGACA +
Preference number: 6 (lower is better)
Translates to: WLSLPSVLPFQV*MTSSRRSISRT
Trigger: TGTCCTGGATATTGACCTCCTGGAACTTGTCATCAAAACCTGGAAGGGCAGCACTGAGGGCAGACTGAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CAA 90 bp CAGTCCCTTCTGCTCATGGCCCCTGGATGCCACATCACAGATGGTTaGAGCTGTATCCAGGATACCCTCTCGAACAGCATCATAAGCCTT +
Preference number: 6 (lower is better)
Translates to: QSLLLMAPGCHITDG*SCIQDTLSNSIISL
Trigger: AAGGCTTATGATGCTGTTCGAGAGGGTATCCTGGATACAGCTCAAACCATCTGTGATGTGGCATCCAGGGGCCATGAGCAGAAGGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CAA 72 bp GGATCTGGTTACGCATGCCCCCTAGCACGTTGGATGTaGCCTCTGTTGCTACGATTATTGGTTTTACCACGG +
Preference number: 6 (lower is better)
Translates to: GSGYACPLARWM*PLLLRLLVLPR
Trigger: CCGTGGTAAAACCAATAATCGTAGCAACAGAGGCAACATCCAACGTGCTAGGGGGCATGCGTAACCAGATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CAA 90 bp TTGTGCGCATCTGGAAGGATCTGGTTACGCATGCCCCCTAGCACGTaGGATGTTGCCTCTGTTGCTACGATTATTGGTTTTACCACGGTT +
Preference number: 6 (lower is better)
Translates to: LCASGRIWLRMPPST*DVASVATIIGFTTV
Trigger: AACCGTGGTAAAACCAATAATCGTAGCAACAGAGGCAACATCCAACGTGCTAGGGGGCATGCGTAACCAGATCCTTCCAGATGCGCACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CAA 72 bp AACTGGGCGTCTTCTTCATCTGAATCCGAGTCTAGCTaGAAGGCTGACTTGCACATCTTGAACCCCGAAGAG +
Preference number: 6 (lower is better)
Translates to: NWASSSSESESS*KADLHILNPEE
Trigger: CTCTTCGGGGTTCAAGATGTGCAAGTCAGCCTTCAAGCTAGACTCGGATTCAGATGAAGAAGACGCCCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CAA 90 bp CGATGGAGCTCACAAAGCCTTCCACCAGTTCCAGTGGTGACTCCATaGACCTCAAAAACTCGTTCACAGACCAGGTTTCCAGGTGAATAT +
Preference number: 6 (lower is better)
Translates to: RWSSQSLPPVPVVTP*TSKTRSQTRFPGEY
Trigger: ATATTCACCTGGAAACCTGGTCTGTGAACGAGTTTTTGAGGTCAATGGAGTCACCACTGGAACTGGTGGAAGGCTTTGTGAGCTCCATCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS CCA 72 bp CTGGAAGGATCTGGTTACGCATGCCCCCTAGCACGTTaGATGTTGCCTCTGTTGCTACGATTATTGGTTTTA +
Preference number: 6 (lower is better)
Translates to: LEGSGYACPLAR*MLPLLLRLLVL
Trigger: TAAAACCAATAATCGTAGCAACAGAGGCAACATCCAACGTGCTAGGGGGCATGCGTAACCAGATCCTTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2
CDS CAA 72 bp TCACAAAGCCTTCCACCAGTTCCAGTGGTGACTCCATaGACCTCAAAAACTCGTTCACAGACCAGGTTTCCA +
Preference number: 6 (lower is better)
Translates to: SQSLPPVPVVTP*TSKTRSQTRFP
Trigger: TGGAAACCTGGTCTGTGAACGAGTTTTTGAGGTCAATGGAGTCACCACTGGAACTGGTGGAAGGCTTTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045351.13
CDS CAA 72 bp TCTGGAAGGATCTGGTTACGCATGCCCCCTAGCACGTaGGATGTTGCCTCTGTTGCTACGATTATTGGTTTT +
Preference number: 6 (lower is better)
Translates to: SGRIWLRMPPST*DVASVATIIGF
Trigger: AAAACCAATAATCGTAGCAACAGAGGCAACATCCAACGTGCTAGGGGGCATGCGTAACCAGATCCTTCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045351.13
ENSMUST00000145600.2