Pregenerated sensors for ASTE1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032567Ensembl transcript IDs: ENSMUST00000035181.10, ENSMUST00000123807.8, ENSMUST00000167674.2, ENSMUST00000176350.5, ENSMUST00000176940.3, ENSMUST00000177402.8, ENSMUST00000189758.7
Found 197 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCACTGAGCCTGCCTGGGTGCGGAGTCCACATTTCCAGGGCTGTTaGCGATGGCATGCAAGGGTTCCCTCAGCATCCCCAGCAGTAGGG | + |
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Preference number: 1 (lower is better) Translates to: GTEPAWVRSPHFQGC*RWHARVPSASPAVG Trigger: CCCTACTGCTGGGGATGCTGAGGGAACCCTTGCATGCCATCGTCAACAGCCCTGGAAATGTGGACTCCGCACCCAGGCAGGCTCAGTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176350.5 |
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| 3UTR TCA 90 bp | CTGTGGATCTTCAGTGCCTTTCACAAATATCTGGGAGCAAGGCACTaGGCCTGCCTGGGTGCGGAGTCCACATTTCCAGGGCTGTTGACG | + |
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Preference number: 1 (lower is better) Translates to: LWIFSAFHKYLGARH*ACLGAESTFPGLLT Trigger: CGTCAACAGCCCTGGAAATGTGGACTCCGCACCCAGGCAGGCTCAGTGCCTTGCTCCCAGATATTTGTGAAAGGCACTGAAGATCCACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176350.5 |
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| 3UTR TCA 90 bp | AGCAGCTGGTTGAGATATAACCCCATCTGGAGACAGGACTGCCACTaGCAGAAGACGTGCGCTGTGTCTAAATCCACTCTTGGACCCGGC | + |
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Preference number: 1 (lower is better) Translates to: SSWLRYNPIWRQDCH*QKTCAVSKSTLGPG Trigger: GCCGGGTCCAAGAGTGGATTTAGACACAGCGCACGTCTTCTGTCAGTGGCAGTCCTGTCTCCAGATGGGGTTATATCTCAACCAGCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000176350.5 ENSMUST00000177402.8 ENSMUST00000189758.7 |
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| 3UTR CCA 90 bp | GTGTCTAAATCCACTCTTGGACCCGGCCGCATGGGTGCCTTCACCTaGCATAATTCTTCATACAACATCTTGGCACCACCTCTCTGTGGA | + |
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Preference number: 1 (lower is better) Translates to: VSKSTLGPGRMGAFT*HNSSYNILAPPLCG Trigger: TCCACAGAGAGGTGGTGCCAAGATGTTGTATGAAGAATTATGCCAGGTGAAGGCACCCATGCGGCCGGGTCCAAGAGTGGATTTAGACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000176350.5 ENSMUST00000177402.8 ENSMUST00000189758.7 |
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| 3UTR CCA 90 bp | AGAAGACGTGCGCTGTGTCTAAATCCACTCTTGGACCCGGCCGCATaGGTGCCTTCACCTGGCATAATTCTTCATACAACATCTTGGCAC | + |
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Preference number: 1 (lower is better) Translates to: RRRALCLNPLLDPAA*VPSPGIILHTTSWH Trigger: GTGCCAAGATGTTGTATGAAGAATTATGCCAGGTGAAGGCACCCATGCGGCCGGGTCCAAGAGTGGATTTAGACACAGCGCACGTCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000176350.5 ENSMUST00000177402.8 ENSMUST00000189758.7 |
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| 3UTR GCA 90 bp | GGACATAGACTCAGGAGGCTTTCTACAGAACTAGATGCTGGCAGTTaGTGGCAGAGTCTGTGGACCAGGCTTCCGTTGTACAACCAAGTT | + |
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Preference number: 1 (lower is better) Translates to: GHRLRRLSTELDAGS*WQSLWTRLPLYNQV Trigger: AACTTGGTTGTACAACGGAAGCCTGGTCCACAGACTCTGCCAGCAACTGCCAGCATCTAGTTCTGTAGAAAGCCTCCTGAGTCTATGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177402.8 ENSMUST00000189758.7 |
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| 3UTR TCA 90 bp | AGTGAAAGAAAGCACACTGAAGAACTACAGATGACTCAGAGCCTGTaGGACGCTTCTAAGCCTGACAACCTGAGGGTGATCCCTGGAGCT | + |
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Preference number: 1 (lower is better) Translates to: SERKHTEELQMTQSL*DASKPDNLRVIPGA Trigger: AGCTCCAGGGATCACCCTCAGGTTGTCAGGCTTAGAAGCGTCTCACAGGCTCTGAGTCATCTGTAGTTCTTCAGTGTGCTTTCTTTCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000167674.2 |
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| 3UTR GCA 90 bp | ATCCCTGGAGCTCACATGATGGAATCAGAACCAACTCTCACAAGGTaGTCTCTGACTTCCACACAAGTACAATGGTTCTCCATCCCCAAC | + |
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Preference number: 1 (lower is better) Translates to: IPGAHMMESEPTLTR*SLTSTQVQWFSIPN Trigger: GTTGGGGATGGAGAACCATTGTACTTGTGTGGAAGTCAGAGAGCACCTTGTGAGAGTTGGTTCTGATTCCATCATGTGAGCTCCAGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000167674.2 |
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| 3UTR CCA 90 bp | GCCGCATGGGTGCCTTCACCTGGCATAATTCTTCATACAACATCTTaGCACCACCTCTCTGTGGATCTTCAGTGCCTTTCACAAATATCT | + |
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Preference number: 1 (lower is better) Translates to: AAWVPSPGIILHTTS*HHLSVDLQCLSQIS Trigger: AGATATTTGTGAAAGGCACTGAAGATCCACAGAGAGGTGGTGCCAAGATGTTGTATGAAGAATTATGCCAGGTGAAGGCACCCATGCGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176350.5 |
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| 3UTR TCA 90 bp | GTGCTGTCATTGATAGGAGAGTTCTGTTGTTTGTGTCTGTACTACTaGAGCACGAGCATAAGGGGCCAGGTGTCTGCACTTTGTTCTTTA | + |
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Preference number: 1 (lower is better) Translates to: VLSLIGEFCCLCLYY*STSIRGQVSALCSL Trigger: TAAAGAACAAAGTGCAGACACCTGGCCCCTTATGCTCGTGCTTCAGTAGTACAGACACAAACAACAGAACTCTCCTATCAATGACAGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189758.7 |
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| 3UTR GCA 90 bp | AACTTCTTTAAGTTATTTGATTGCATAGGGGCAGTGCTTGGCATCTaGAGTGGTTCCCAGGCTGGCAACCTTTTTCTTCTGCCTCTTTTT | + |
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Preference number: 1 (lower is better) Translates to: NFFKLFDCIGAVLGI*SGSQAGNLFLLPLF Trigger: AAAAAGAGGCAGAAGAAAAAGGTTGCCAGCCTGGGAACCACTGCAGATGCCAAGCACTGCCCCTATGCAATCAAATAACTTAAAGAAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189758.7 |
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| 3UTR CCA 90 bp | GAACCAACTCTCACAAGGTGCTCTCTGACTTCCACACAAGTACAATaGTTCTCCATCCCCAACACACATATAAATAAATACAGACATTTC | + |
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Preference number: 1 (lower is better) Translates to: EPTLTRCSLTSTQVQ*FSIPNTHINKYRHF Trigger: GAAATGTCTGTATTTATTTATATGTGTGTTGGGGATGGAGAACCATTGTACTTGTGTGGAAGTCAGAGAGCACCTTGTGAGAGTTGGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000167674.2 |
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| 3UTR CCA 90 bp | CCTTCTACCATTTGTTGTACTGTCTTCTACTTCATTCAGTATGCTTaGGAAATAGATGAGTTTGTTTTGTGCAACACCATCTGTTTTTAT | + |
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Preference number: 1 (lower is better) Translates to: PSTICCTVFYFIQYA*EIDEFVLCNTICFY Trigger: ATAAAAACAGATGGTGTTGCACAAAACAAACTCATCTATTTCCCAAGCATACTGAATGAAGTAGAAGACAGTACAACAAATGGTAGAAGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189758.7 |
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| 3UTR-3UTR GCA 90 bp | GGGCTGTTGACGATGGCATGCAAGGGTTCCCTCAGCATCCCCAGCAGTAGGGCCCAGATGATGGAGCTTTaGCTTGGCTTCTGTGGACTG | + |
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Preference number: 2 (lower is better) Translates to: GLLTMACKGSLSIPSSRAQMMEL*LGFCGL Trigger: CAGTCCACAGAAGCCAAGGCAAAGCTCCATCATCTG...GGCCCTACTGCTGGGGATGCTGAGGGAACCCTTGCATGCCATCGTCAACAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176350.5 |
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| 3UTR-3UTR TCA 90 bp | ACTAGATGCTGGCAGTTGCTGGCAGAGTCTGTGGACCAGGCTTCCGTTGTACAAAGACAGGACTGCCACTaGCAGAAGACGTGCGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: TRCWQLLAESVDQASVVQRQDCH*QKTCAV Trigger: CACAGCGCACGTCTTCTGTCAGTGGCAGTCCTGTCT...TTGTACAACGGAAGCCTGGTCCACAGACTCTGCCAGCAACTGCCAGCATCTAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177402.8 ENSMUST00000189758.7 |
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| 3UTR-3UTR CCA 90 bp | ACTGCCACTGACAGAAGACGTGCGCTGTGTCTAAATCCACTCTTGGACCCGGCCGGCACCACCTCTCTGTaGATCTTCAGTGCCTTTCAC | + |
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Preference number: 2 (lower is better) Translates to: TATDRRRALCLNPLLDPAGTTSL*IFSAFH Trigger: GTGAAAGGCACTGAAGATCCACAGAGAGGTGGTGCC...GGCCGGGTCCAAGAGTGGATTTAGACACAGCGCACGTCTTCTGTCAGTGGCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176350.5 |
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| 3UTR CAA 90 bp | AGGACTGCCACTGACAGAAGACGTGCGCTGTGTCTAAATCCACTCTaGGACCCGGCCGCATGGGTGCCTTCACCTGGCATAATTCTTCAT | + |
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Preference number: 2 (lower is better) Translates to: RTATDRRRALCLNPL*DPAAWVPSPGIILH Trigger: ATGAAGAATTATGCCAGGTGAAGGCACCCATGCGGCCGGGTCCAAGAGTGGATTTAGACACAGCGCACGTCTTCTGTCAGTGGCAGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000176350.5 ENSMUST00000177402.8 ENSMUST00000189758.7 |
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| 3UTR-3UTR CCA 90 bp | ACGTGCGCTGTGTCTAAATCCACTCTTGGACCCGGCCGCATGGGTGCCTTCACCCTTCATACAACATCTTaGCACCACCTCTCTGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: TCAVSKSTLGPGRMGAFTLHTTS*HHLSVD Trigger: ATCCACAGAGAGGTGGTGCCAAGATGTTGTATGAAG...GGTGAAGGCACCCATGCGGCCGGGTCCAAGAGTGGATTTAGACACAGCGCACGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000176350.5 ENSMUST00000177402.8 ENSMUST00000189758.7 |
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| 3UTR-3UTR CCA 90 bp | CATGCAAGGGTTCCCTCAGCATCCCCAGCAGTAGGGCCTGCAGATGATGGAGCTTTGCCTTGGCTTCTGTaGACTGCAACCAGTAACAAG | + |
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Preference number: 2 (lower is better) Translates to: HARVPSASPAVGPADDGALPWLL*TATSNK Trigger: CTTGTTACTGGTTGCAGTCCACAGAAGCCAAGGCAA...AGCTCCATCATCTGCAGGCCCTACTGCTGGGGATGCTGAGGGAACCCTTGCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176350.5 |
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| 3UTR-3UTR TCA 90 bp | TGCTTTGCCTCAGGACATAGACTCAGGAGGCTTTCTACAGAACTAGATGCTGGCAGACAGGACTGCCACTaGCAGAAGACGTGCGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: CFASGHRLRRLSTELDAGRQDCH*QKTCAV Trigger: CACAGCGCACGTCTTCTGTCAGTGGCAGTCCTGTCT...GCCAGCATCTAGTTCTGTAGAAAGCCTCCTGAGTCTATGTCCTGAGGCAAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177402.8 ENSMUST00000189758.7 |
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| 3UTR-3UTR GCA 90 bp | ATGGGTGCCTTCACCTGGCATAATTCTTCATACAACATCTTGGCACCACCTCTCCTGAGCCTGCCTGGGTaGGGAGTCCACATTTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: MGAFTWHNSSYNILAPPLLSLPG*GVHISR Trigger: CCTGGAAATGTGGACTCCGCACCCAGGCAGGCTCAG...GAGAGGTGGTGCCAAGATGTTGTATGAAGAATTATGCCAGGTGAAGGCACCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176350.5 |
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| 3UTR-3UTR CCA 90 bp | TGGGTGCCTTCACCTGGCATAATTCTTCATACAACATCTTGGCACCACCTCTCTGGCACTGAGCCTGCCTaGGTGCGGAGTCCACATTTC | + |
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Preference number: 2 (lower is better) Translates to: WVPSPGIILHTTSWHHLSGTEPA*VRSPHF Trigger: GAAATGTGGACTCCGCACCCAGGCAGGCTCAGTGCC...AGAGAGGTGGTGCCAAGATGTTGTATGAAGAATTATGCCAGGTGAAGGCACCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176350.5 |
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| 3UTR CAA 90 bp | TCTACATGCTCCTCCAAGCTTTCAGGCATTAACGGTCCAAACCGGTaGCTTCTGTCATACCAGTGCTTGGCATCTGCAGTGGTTCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: STCSSKLSGINGPNR*LLSYQCLASAVVPR Trigger: CCTGGGAACCACTGCAGATGCCAAGCACTGGTATGACAGAAGCAACCGGTTTGGACCGTTAATGCCTGAAAGCTTGGAGGAGCATGTAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177402.8 |
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| 3UTR-3UTR TCA 90 bp | ATGGGTGCCTTCACCTGGCATAATTCTTCATACAACATCTTGGCACCACCTCTCAGACAGGACTGCCACTaGCAGAAGACGTGCGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: MGAFTWHNSSYNILAPPLRQDCH*QKTCAV Trigger: CACAGCGCACGTCTTCTGTCAGTGGCAGTCCTGTCT...GAGAGGTGGTGCCAAGATGTTGTATGAAGAATTATGCCAGGTGAAGGCACCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000176350.5 ENSMUST00000177402.8 ENSMUST00000189758.7 |
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| 3UTR-3UTR CCA 90 bp | TGCTTTGCCTCAGGACATAGACTCAGGAGGCTTTCTACAGAACTAGATGCTGGCTGCTGGCAGAGTCTGTaGACCAGGCTTCCGTTGTAC | + |
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Preference number: 2 (lower is better) Translates to: CFASGHRLRRLSTELDAGCWQSL*TRLPLY Trigger: GTACAACGGAAGCCTGGTCCACAGACTCTGCCAGCA...GCCAGCATCTAGTTCTGTAGAAAGCCTCCTGAGTCTATGTCCTGAGGCAAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177402.8 ENSMUST00000189758.7 |
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| 3UTR-3UTR TCA 90 bp | CATACCAGTGCTTGGCATCTGCAGTGGTTCCCAGGCTGGCAACCTTTTTCTTCTTGGACAGCAGCTGGTTaGGATATAACCCCATCTGGA | + |
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Preference number: 2 (lower is better) Translates to: HTSAWHLQWFPGWQPFSSWTAAG*DITPSG Trigger: TCCAGATGGGGTTATATCTCAACCAGCTGCTGTCCA...AGAAGAAAAAGGTTGCCAGCCTGGGAACCACTGCAGATGCCAAGCACTGGTATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177402.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGGCAGTGCTTGGCATCTGCAGTGGTTCCCAGGCTGGCAACCTTTTTCTTCTCTTCATACAACATCTTaGCACCACCTCTCTGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: RGSAWHLQWFPGWQPFSSLHTTS*HHLSVD Trigger: ATCCACAGAGAGGTGGTGCCAAGATGTTGTATGAAG...AGAAGAAAAAGGTTGCCAGCCTGGGAACCACTGCAGATGCCAAGCACTGCCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189758.7 |
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| 3UTR-3UTR CCA 90 bp | GCAGTTGCTGGCAGAGTCTGTGGACCAGGCTTCCGTTGTACAACCAAGTTAGGTCTTCATACAACATCTTaGCACCACCTCTCTGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: AVAGRVCGPGFRCTTKLGLHTTS*HHLSVD Trigger: ATCCACAGAGAGGTGGTGCCAAGATGTTGTATGAAG...ACCTAACTTGGTTGTACAACGGAAGCCTGGTCCACAGACTCTGCCAGCAACTGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177402.8 ENSMUST00000189758.7 |
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| 3UTR-3UTR CCA 90 bp | TGCTTTGCCTCAGGACATAGACTCAGGAGGCTTTCTACAGAACTAGATGCTGGCGGAGTGGACAGCAGCTaGTTGAGATATAACCCCATC | + |
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Preference number: 2 (lower is better) Translates to: CFASGHRLRRLSTELDAGGVDSS*LRYNPI Trigger: GATGGGGTTATATCTCAACCAGCTGCTGTCCACTCC...GCCAGCATCTAGTTCTGTAGAAAGCCTCCTGAGTCTATGTCCTGAGGCAAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177402.8 ENSMUST00000189758.7 |
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| 3UTR CAA 90 bp | GGCCGCATGGGTGCCTTCACCTGGCATAATTCTTCATACAACATCTaGGCACCACCTCTCTGTGGATCTTCAGTGCCTTTCACAAATATC | + |
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Preference number: 2 (lower is better) Translates to: GRMGAFTWHNSSYNI*APPLCGSSVPFTNI Trigger: GATATTTGTGAAAGGCACTGAAGATCCACAGAGAGGTGGTGCCAAGATGTTGTATGAAGAATTATGCCAGGTGAAGGCACCCATGCGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176350.5 |
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| 3UTR CAA 90 bp | GGTGACTGTCAACACTGGTGTGCTGTCATTGATAGGAGAGTTCTGTaGTTTGTGTCTGTACTACTGAAGCACGAGCATAAGGGGCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: GDCQHWCAVIDRRVL*FVSVLLKHEHKGPG Trigger: ACCTGGCCCCTTATGCTCGTGCTTCAGTAGTACAGACACAAACAACAGAACTCTCCTATCAATGACAGCACACCAGTGTTGACAGTCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189758.7 |
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| 3UTR-3UTR GCA 90 bp | AATCCTCTAGGCAGCTGCTTTGACCTAGATTGTAGCACAACCCTGAGTCTGTCCTTCTACAGAACTAGATaGTGGCAGTTGCTGGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: NPLGSCFDLDCSTTLSLSFYRTR*WQLLAE Trigger: CTCTGCCAGCAACTGCCAGCATCTAGTTCTGTAGAA...GGACAGACTCAGGGTTGTGCTACAATCTAGGTCAAAGCAGCTGCCTAGAGGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189758.7 |
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| 3UTR-3UTR CCA 90 bp | GATATAACCCCATCTGGAGACAGGACTGCCACTGACAGAAGACGTGCGCTGTGTATGGGTGCCTTCACCTaGCATAATTCTTCATACAAC | + |
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Preference number: 2 (lower is better) Translates to: DITPSGDRTATDRRRALCMGAFT*HNSSYN Trigger: GTTGTATGAAGAATTATGCCAGGTGAAGGCACCCAT...ACACAGCGCACGTCTTCTGTCAGTGGCAGTCCTGTCTCCAGATGGGGTTATATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000176350.5 ENSMUST00000177402.8 ENSMUST00000189758.7 |
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| 3UTR-3UTR CCA 90 bp | CACTGGTGTGCTGTCATTGATAGGAGAGTTCTGTTGTTTGTGTCTGTACTACTGCATAGGGGCAGTGCTTaGCATCTGCAGTGGTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: HWCAVIDRRVLLFVSVLLHRGSA*HLQWFP Trigger: TGGGAACCACTGCAGATGCCAAGCACTGCCCCTATG...CAGTAGTACAGACACAAACAACAGAACTCTCCTATCAATGACAGCACACCAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189758.7 |
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| 3UTR-3UTR CCA 90 bp | AATCCTCTAGGCAGCTGCTTTGACCTAGATTGTAGCACAACCCTGAGTCTGTCCGGTGACTGTCAACACTaGTGTGCTGTCATTGATAGG | + |
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Preference number: 2 (lower is better) Translates to: NPLGSCFDLDCSTTLSLSGDCQH*CAVIDR Trigger: CCTATCAATGACAGCACACCAGTGTTGACAGTCACC...GGACAGACTCAGGGTTGTGCTACAATCTAGGTCAAAGCAGCTGCCTAGAGGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189758.7 |
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| 3UTR-3UTR TCA 90 bp | AAGCTTTCAGGCATTAACGGTCCAAACCGGTTGCTTCTGTCATACCAGTGCTTGTTCAGCTGGGGCATATaGTTTTGTGGCATTGAACAG | + |
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Preference number: 2 (lower is better) Translates to: KLSGINGPNRLLLSYQCLFSWGI*FCGIEQ Trigger: CTGTTCAATGCCACAAAATCATATGCCCCAGCTGAA...CAAGCACTGGTATGACAGAAGCAACCGGTTTGGACCGTTAATGCCTGAAAGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177402.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGTGCCTTCACCTGGCATAATTCTTCATACAACATCTTGGCACCACCTCTCTATGGGTGCCTTCACCTaGCATAATTCTTCATACAAC | + |
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Preference number: 2 (lower is better) Translates to: WVPSPGIILHTTSWHHLSMGAFT*HNSSYN Trigger: GTTGTATGAAGAATTATGCCAGGTGAAGGCACCCAT...AGAGAGGTGGTGCCAAGATGTTGTATGAAGAATTATGCCAGGTGAAGGCACCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000176350.5 ENSMUST00000177402.8 ENSMUST00000189758.7 |
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| 3UTR CAA 90 bp | TCTGTACTACTGAAGCACGAGCATAAGGGGCCAGGTGTCTGCACTTaGTTCTTTATTCTTTCTGGCTCAACTGTCAAGTGTACATTGTTC | + |
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Preference number: 2 (lower is better) Translates to: SVLLKHEHKGPGVCT*FFILSGSTVKCTLF Trigger: GAACAATGTACACTTGACAGTTGAGCCAGAAAGAATAAAGAACAAAGTGCAGACACCTGGCCCCTTATGCTCGTGCTTCAGTAGTACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189758.7 |
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| 3UTR-3UTR GCA 90 bp | CTGAAAAGGACCATGAGGAGTGAAAGAAAGCACACTGAAGAACTACAGATGACTCCAACTCTCACAAGGTaGTCTCTGACTTCCACACAA | + |
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Preference number: 2 (lower is better) Translates to: LKRTMRSERKHTEELQMTPTLTR*SLTSTQ Trigger: TTGTGTGGAAGTCAGAGAGCACCTTGTGAGAGTTGG...AGTCATCTGTAGTTCTTCAGTGTGCTTTCTTTCACTCCTCATGGTCCTTTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000167674.2 |
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| 3UTR CAA 90 bp | TGCACTTTGTTCTTTATTCTTTCTGGCTCAACTGTCAAGTGTACATaGTTCTGTCTGATTAGGTGGAACGTGAAATCATTGTCTGACCAA | + |
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Preference number: 2 (lower is better) Translates to: CTLFFILSGSTVKCT*FCLIRWNVKSLSDQ Trigger: TTGGTCAGACAATGATTTCACGTTCCACCTAATCAGACAGAACAATGTACACTTGACAGTTGAGCCAGAAAGAATAAAGAACAAAGTGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189758.7 |
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| 3UTR CAA 90 bp | ATTTCAGTCTTCCAAATTTTATTAGTCCAAATTAGGATGAATCAGTaGACTGTCCTAGAATCTAAGTGTCCGGTTTCACTCAAGTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: ISVFQILLVQIRMNQ*TVLESKCPVSLKSP Trigger: AGGAGACTTGAGTGAAACCGGACACTTAGATTCTAGGACAGTCAACTGATTCATCCTAATTTGGACTAATAAAATTTGGAAGACTGAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189758.7 |
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| 3UTR TCA 72 bp | CCTGCCTGGGTGCGGAGTCCACATTTCCAGGGCTGTTaGCGATGGCATGCAAGGGTTCCCTCAGCATCCCCA | + |
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Preference number: 3 (lower is better) Translates to: PAWVRSPHFQGC*RWHARVPSASP Trigger: TGGGGATGCTGAGGGAACCCTTGCATGCCATCGTCAACAGCCCTGGAAATGTGGACTCCGCACCCAGGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176350.5 |
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| 3UTR GCA 72 bp | GCGGAGTCCACATTTCCAGGGCTGTTGACGATGGCATaGAAGGGTTCCCTCAGCATCCCCAGCAGTAGGGCC | + |
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Preference number: 3 (lower is better) Translates to: AESTFPGLLTMA*KGSLSIPSSRA Trigger: GGCCCTACTGCTGGGGATGCTGAGGGAACCCTTGCATGCCATCGTCAACAGCCCTGGAAATGTGGACTCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176350.5 |
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| 3UTR-3UTR CAA 90 bp | GGGCTGTTGACGATGGCATGCAAGGGTTCCCTCAGCATCCCCAGCAGTAGGGCCGCAGATGATGGAGCTTaGCCTTGGCTTCTGTGGACT | + |
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Preference number: 3 (lower is better) Translates to: GLLTMACKGSLSIPSSRAADDGA*PWLLWT Trigger: AGTCCACAGAAGCCAAGGCAAAGCTCCATCATCTGC...GGCCCTACTGCTGGGGATGCTGAGGGAACCCTTGCATGCCATCGTCAACAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176350.5 |
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| 3UTR-3UTR CAA 90 bp | AGACGTGCGCTGTGTCTAAATCCACTCTTGGACCCGGCCGCATGGGTGCCTTCAACTAGATGCTGGCAGTaGCTGGCAGAGTCTGTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: RRALCLNPLLDPAAWVPSTRCWQ*LAESVD Trigger: GTCCACAGACTCTGCCAGCAACTGCCAGCATCTAGT...TGAAGGCACCCATGCGGCCGGGTCCAAGAGTGGATTTAGACACAGCGCACGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177402.8 ENSMUST00000189758.7 |
||
| 3UTR TCA 72 bp | GGTTCCCTCAGCATCCCCAGCAGTAGGGCCTGCAGATaGTGGAGCTTTGCCTTGGCTTCTGTGGACTGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: GSLSIPSSRACR*WSFALASVDCN Trigger: GTTGCAGTCCACAGAAGCCAAGGCAAAGCTCCATCATCTGCAGGCCCTACTGCTGGGGATGCTGAGGGAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176350.5 |
||
| 3UTR-3UTR CAA 90 bp | AGACGTGCGCTGTGTCTAAATCCACTCTTGGACCCGGCCGCATGGGTGCCTTCAGTGGACAGCAGCTGGTaGAGATATAACCCCATCTGG | + |
|
Preference number: 3 (lower is better) Translates to: RRALCLNPLLDPAAWVPSVDSSW*RYNPIW Trigger: CCAGATGGGGTTATATCTCAACCAGCTGCTGTCCAC...TGAAGGCACCCATGCGGCCGGGTCCAAGAGTGGATTTAGACACAGCGCACGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000176350.5 ENSMUST00000177402.8 ENSMUST00000189758.7 |
||
| 3UTR GCA 72 bp | CTCAGGAGGCTTTCTACAGAACTAGATGCTGGCAGTTaGTGGCAGAGTCTGTGGACCAGGCTTCCGTTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: LRRLSTELDAGS*WQSLWTRLPLY Trigger: GTACAACGGAAGCCTGGTCCACAGACTCTGCCAGCAACTGCCAGCATCTAGTTCTGTAGAAAGCCTCCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177402.8 ENSMUST00000189758.7 |
||
| 3UTR GCA 72 bp | ATTAACGGTCCAAACCGGTTGCTTCTGTCATACCAGTaGTTGGCATCTGCAGTGGTTCCCAGGCTGGCAACC | + |
|
Preference number: 3 (lower is better) Translates to: INGPNRLLLSYQ*LASAVVPRLAT Trigger: GGTTGCCAGCCTGGGAACCACTGCAGATGCCAAGCACTGGTATGACAGAAGCAACCGGTTTGGACCGTTAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177402.8 |
||
| 3UTR CCA 72 bp | TCCACTCTTGGACCCGGCCGCATGGGTGCCTTCACCTaGCATAATTCTTCATACAACATCTTGGCACCACCT | + |
|
Preference number: 3 (lower is better) Translates to: STLGPGRMGAFT*HNSSYNILAPP Trigger: AGGTGGTGCCAAGATGTTGTATGAAGAATTATGCCAGGTGAAGGCACCCATGCGGCCGGGTCCAAGAGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000176350.5 ENSMUST00000177402.8 ENSMUST00000189758.7 |
||
| 3UTR CCA 72 bp | GCGCTGTGTCTAAATCCACTCTTGGACCCGGCCGCATaGGTGCCTTCACCTGGCATAATTCTTCATACAACA | + |
|
Preference number: 3 (lower is better) Translates to: ALCLNPLLDPAA*VPSPGIILHTT Trigger: TGTTGTATGAAGAATTATGCCAGGTGAAGGCACCCATGCGGCCGGGTCCAAGAGTGGATTTAGACACAGCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000176350.5 ENSMUST00000177402.8 ENSMUST00000189758.7 |
||
| 3UTR-3UTR CAA 90 bp | AATCCTCTAGGCAGCTGCTTTGACCTAGATTGTAGCACAACCCTGAGTCTGTCCGTGGACAGCAGCTGGTaGAGATATAACCCCATCTGG | + |
|
Preference number: 3 (lower is better) Translates to: NPLGSCFDLDCSTTLSLSVDSSW*RYNPIW Trigger: CCAGATGGGGTTATATCTCAACCAGCTGCTGTCCAC...GGACAGACTCAGGGTTGTGCTACAATCTAGGTCAAAGCAGCTGCCTAGAGGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189758.7 |
||
| 3UTR TCA 72 bp | AAGCACACTGAAGAACTACAGATGACTCAGAGCCTGTaGGACGCTTCTAAGCCTGACAACCTGAGGGTGATC | + |
|
Preference number: 3 (lower is better) Translates to: KHTEELQMTQSL*DASKPDNLRVI Trigger: GATCACCCTCAGGTTGTCAGGCTTAGAAGCGTCTCACAGGCTCTGAGTCATCTGTAGTTCTTCAGTGTGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000167674.2 |
||
| 3UTR GCA 72 bp | ACAACATCTTGGCACCACCTCTCTGTGGATCTTCAGTaGCTTTCACAAATATCTGGGAGCAAGGCACTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: TTSWHHLSVDLQ*LSQISGSKALS Trigger: GCTCAGTGCCTTGCTCCCAGATATTTGTGAAAGGCACTGAAGATCCACAGAGAGGTGGTGCCAAGATGTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176350.5 |
||
| 3UTR TCA 72 bp | TTGAGATATAACCCCATCTGGAGACAGGACTGCCACTaGCAGAAGACGTGCGCTGTGTCTAAATCCACTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LRYNPIWRQDCH*QKTCAVSKSTL Trigger: AAGAGTGGATTTAGACACAGCGCACGTCTTCTGTCAGTGGCAGTCCTGTCTCCAGATGGGGTTATATCTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000176350.5 ENSMUST00000177402.8 ENSMUST00000189758.7 |
||
| 3UTR TCA 72 bp | TTGATAGGAGAGTTCTGTTGTTTGTGTCTGTACTACTaGAGCACGAGCATAAGGGGCCAGGTGTCTGCACTT | + |
|
Preference number: 3 (lower is better) Translates to: LIGEFCCLCLYY*STSIRGQVSAL Trigger: AAGTGCAGACACCTGGCCCCTTATGCTCGTGCTTCAGTAGTACAGACACAAACAACAGAACTCTCCTATCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189758.7 |
||
| 3UTR GCA 72 bp | GCTCACATGATGGAATCAGAACCAACTCTCACAAGGTaGTCTCTGACTTCCACACAAGTACAATGGTTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: AHMMESEPTLTR*SLTSTQVQWFS Trigger: GGAGAACCATTGTACTTGTGTGGAAGTCAGAGAGCACCTTGTGAGAGTTGGTTCTGATTCCATCATGTGAGC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000167674.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCAAACTCAGAGAGATAGCATATGAACCAGGGTGTACATTGGAAGATCCTGTGGATAGGAGAGTTCTGTaGTTTGTGTCTGTACTACTG | + |
|
Preference number: 3 (lower is better) Translates to: PKLREIAYEPGCTLEDPVDRRVL*FVSVLL Trigger: CAGTAGTACAGACACAAACAACAGAACTCTCCTATC...CACAGGATCTTCCAATGTACACCCTGGTTCATATGCTATCTCTCTGAGTTTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189758.7 |
||
| 3UTR TCA 72 bp | AAAATAGAAAAGTCCCAAACTCAGAGAGATAGCATATaGACCAGGGTGTACATTGGAAGATCCTGTGCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: KIEKSQTQRDSI*TRVYIGRSCAG Trigger: GCCAGCACAGGATCTTCCAATGTACACCCTGGTTCATATGCTATCTCTCTGAGTTTGGGACTTTTCTATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189758.7 |
||
| 3UTR CCA 72 bp | CTCACAAGGTGCTCTCTGACTTCCACACAAGTACAATaGTTCTCCATCCCCAACACACATATAAATAAATAC | + |
|
Preference number: 3 (lower is better) Translates to: LTRCSLTSTQVQ*FSIPNTHINKY Trigger: GTATTTATTTATATGTGTGTTGGGGATGGAGAACCATTGTACTTGTGTGGAAGTCAGAGAGCACCTTGTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000167674.2 |
||
| 3UTR CAA 72 bp | GCCTGCCTGGGTGCGGAGTCCACATTTCCAGGGCTGTaGACGATGGCATGCAAGGGTTCCCTCAGCATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ACLGAESTFPGL*TMACKGSLSIP Trigger: GGGGATGCTGAGGGAACCCTTGCATGCCATCGTCAACAGCCCTGGAAATGTGGACTCCGCACCCAGGCAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176350.5 |
||
| CDS-3UTR TCA 90 bp | ACCAGGCTTCCGTTGTACAACCAAGTTAGGTTTGGCTCTGGCAGAGGAGTGGACCTGGGAGCAAGGCACTaGGCCTGCCTGGGTGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TRLPLYNQVRFGSGRGVDLGARH*ACLGAE Trigger: CTCCGCACCCAGGCAGGCTCAGTGCCTTGCTCCCAG...GTCCACTCCTCTGCCAGAGCCAAACCTAACTTGGTTGTACAACGGAAGCCTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177402.8 ENSMUST00000189758.7 |
||
| CDS-3UTR TCA 90 bp | TGCTTTGCCTCAGGACATAGACTCAGGAGGCTTTCTACAGAACTAGATGCTGGCCTGGGAGCAAGGCACTaGGCCTGCCTGGGTGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CFASGHRLRRLSTELDAGLGARH*ACLGAE Trigger: CTCCGCACCCAGGCAGGCTCAGTGCCTTGCTCCCAG...GCCAGCATCTAGTTCTGTAGAAAGCCTCCTGAGTCTATGTCCTGAGGCAAAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177402.8 ENSMUST00000189758.7 |
||
| 3UTR CAA 72 bp | ACTGACAGAAGACGTGCGCTGTGTCTAAATCCACTCTaGGACCCGGCCGCATGGGTGCCTTCACCTGGCATA | + |
|
Preference number: 4 (lower is better) Translates to: TDRRRALCLNPL*DPAAWVPSPGI Trigger: TATGCCAGGTGAAGGCACCCATGCGGCCGGGTCCAAGAGTGGATTTAGACACAGCGCACGTCTTCTGTCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000176350.5 ENSMUST00000177402.8 ENSMUST00000189758.7 |
||
| CDS-3UTR CCA 90 bp | GCTCCTCCAAGCTTTCAGGCATTAACGGTCCAAACCGGTTGCTTCTGTCATACCGGCACTGAGCCTGCCTaGGTGCGGAGTCCACATTTC | + |
|
Preference number: 4 (lower is better) Translates to: APPSFQALTVQTGCFCHTGTEPA*VRSPHF Trigger: GAAATGTGGACTCCGCACCCAGGCAGGCTCAGTGCC...GGTATGACAGAAGCAACCGGTTTGGACCGTTAATGCCTGAAAGCTTGGAGGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177402.8 |
||
| 3UTR CAA 72 bp | GGCAGTTGCTGGCAGAGTCTGTGGACCAGGCTTCCGTaGTACAACCAAGTTAGGTTTGGCTCTGGCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GSCWQSLWTRLP*YNQVRFGSGRG Trigger: TCCTCTGCCAGAGCCAAACCTAACTTGGTTGTACAACGGAAGCCTGGTCCACAGACTCTGCCAGCAACTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177402.8 ENSMUST00000189758.7 |
||
| CDS-3UTR GCA 90 bp | GCATGGGTGCCTTCACCTGGCATAATTCTTCATACAACATCTTGGCACCACCTCCTGAGCCTGCCTGGGTaGGGAGTCCACATTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AWVPSPGIILHTTSWHHLLSLPG*GVHISR Trigger: CCTGGAAATGTGGACTCCGCACCCAGGCAGGCTCAG...GAGGTGGTGCCAAGATGTTGTATGAAGAATTATGCCAGGTGAAGGCACCCATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177402.8 ENSMUST00000189758.7 |
||
| 3UTR CAA 72 bp | AACGGTCCAAACCGGTTGCTTCTGTCATACCAGTGCTaGGCATCTGCAGTGGTTCCCAGGCTGGCAACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NGPNRLLLSYQC*ASAVVPRLATF Trigger: AAAGGTTGCCAGCCTGGGAACCACTGCAGATGCCAAGCACTGGTATGACAGAAGCAACCGGTTTGGACCGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177402.8 |
||
| CDS-3UTR TCA 90 bp | ATCCCTGGAGCTCACATGATGGAATCAGAACCAACTCTCACAAGGTGCTCTCTGAGACAGGACTGCCACTaGCAGAAGACGTGCGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: IPGAHMMESEPTLTRCSLRQDCH*QKTCAV Trigger: CACAGCGCACGTCTTCTGTCAGTGGCAGTCCTGTCT...CAGAGAGCACCTTGTGAGAGTTGGTTCTGATTCCATCATGTGAGCTCCAGGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000167674.2 |
||
| CDS-3UTR GCA 90 bp | CTGTCATACCAGTGCTTGGCATCTGCAGTGGTTCCCAGGCTGGCAACCTTTTTCCTGTTGACGATGGCATaGAAGGGTTCCCTCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: LSYQCLASAVVPRLATFFLLTMA*KGSLSI Trigger: GATGCTGAGGGAACCCTTGCATGCCATCGTCAACAG...GAAAAAGGTTGCCAGCCTGGGAACCACTGCAGATGCCAAGCACTGGTATGACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177402.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTTTCTACAGAACTAGATGCTGGCAGTTGCTGGCAGAGTCTGTGGACCAGGCTGTTGACGATGGCATaGAAGGGTTCCCTCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: RLSTELDAGSCWQSLWTRLLTMA*KGSLSI Trigger: GATGCTGAGGGAACCCTTGCATGCCATCGTCAACAG...CCTGGTCCACAGACTCTGCCAGCAACTGCCAGCATCTAGTTCTGTAGAAAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177402.8 ENSMUST00000189758.7 |
||
| 3UTR CAA 72 bp | ACTCAGGAGGCTTTCTACAGAACTAGATGCTGGCAGTaGCTGGCAGAGTCTGTGGACCAGGCTTCCGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TQEAFYRTRCWQ*LAESVDQASVV Trigger: TACAACGGAAGCCTGGTCCACAGACTCTGCCAGCAACTGCCAGCATCTAGTTCTGTAGAAAGCCTCCTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177402.8 ENSMUST00000189758.7 |
||
| CDS-3UTR TCA 90 bp | TCTGGAGACAGGACTGCCACTGACAGAAGACGTGCGCTGTGTCTAAATCCACTCCCAGGACAACCTGTTTaGCCTTCAGGGCTTCTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SGDRTATDRRRALCLNPLPGQPV*PSGLLR Trigger: TCTTAGAAGCCCTGAAGGTCAAACAGGTTGTCCTGG...GAGTGGATTTAGACACAGCGCACGTCTTCTGTCAGTGGCAGTCCTGTCTCCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177402.8 ENSMUST00000189758.7 |
||
| CDS-3UTR GCA 90 bp | AGGCTTTCTACAGAACTAGATGCTGGCAGTTGCTGGCAGAGTCTGTGGACCAGGCAGATGATGGAGCTTTaGCTTGGCTTCTGTGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: RLSTELDAGSCWQSLWTRQMMEL*LGFCGL Trigger: CAGTCCACAGAAGCCAAGGCAAAGCTCCATCATCTG...CCTGGTCCACAGACTCTGCCAGCAACTGCCAGCATCTAGTTCTGTAGAAAGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177402.8 ENSMUST00000189758.7 |
||
| CDS-3UTR CCA 90 bp | TCACATGATGGAATCAGAACCAACTCTCACAAGGTGCTCTCTGACTTCCACACAGTGGTAGCTGGCCTTTaGCCAGAGCTCCTAGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: SHDGIRTNSHKVLSDFHTVVAGL*PELLAP Trigger: GGGTGCTAGGAGCTCTGGCCAAAGGCCAGCTACCAC...TGTGTGGAAGTCAGAGAGCACCTTGTGAGAGTTGGTTCTGATTCCATCATGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035181.10 |
||
| CDS-3UTR CCA 90 bp | ATCCCTGGAGCTCACATGATGGAATCAGAACCAACTCTCACAAGGTGCTCTCTGTGCTGGCAGAGTCTGTaGACCAGGCTTCCGTTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: IPGAHMMESEPTLTRCSLCWQSL*TRLPLY Trigger: GTACAACGGAAGCCTGGTCCACAGACTCTGCCAGCA...CAGAGAGCACCTTGTGAGAGTTGGTTCTGATTCCATCATGTGAGCTCCAGGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000167674.2 |
||
| CDS-3UTR TCA 90 bp | TCTGGAGACAGGACTGCCACTGACAGAAGACGTGCGCTGTGTCTAAATCCACTCGCTCCAAGTCAGAATTaGAGCAAAGTCGGTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SGDRTATDRRRALCLNPLAPSQN*SKVGGR Trigger: TCTTCCACCGACTTTGCTTCAATTCTGACTTGGAGC...GAGTGGATTTAGACACAGCGCACGTCTTCTGTCAGTGGCAGTCCTGTCTCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176350.5 |
||
| CDS-3UTR GCA 90 bp | ATCAGAACCAACTCTCACAAGGTGCTCTCTGACTTCCACACAAGTACAATGGTTCCAGTGCTTGGCATCTaGAGTGGTTCCCAGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: IRTNSHKVLSDFHTSTMVPVLGI*SGSQAG Trigger: GCCAGCCTGGGAACCACTGCAGATGCCAAGCACTGG...AACCATTGTACTTGTGTGGAAGTCAGAGAGCACCTTGTGAGAGTTGGTTCTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000167674.2 |
||
| CDS-3UTR GCA 90 bp | GTTCATAAAGTTGCTTTGCCTCAGGACATAGACTCAGGAGGCTTTCTACAGAACCTGAGCCTGCCTGGGTaGGGAGTCCACATTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VHKVALPQDIDSGGFLQNLSLPG*GVHISR Trigger: CCTGGAAATGTGGACTCCGCACCCAGGCAGGCTCAG...GTTCTGTAGAAAGCCTCCTGAGTCTATGTCCTGAGGCAAAGCAACTTTATGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177402.8 ENSMUST00000189758.7 |
||
| CDS-3UTR CCA 90 bp | ATCCCTGGAGCTCACATGATGGAATCAGAACCAACTCTCACAAGGTGCTCTCTGGCTGGTACTCCTCCATaGAGCAGCAGAGAAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: IPGAHMMESEPTLTRCSLAGTPP*SSREVP Trigger: AGGAACTTCTCTGCTGCTCCATGGAGGAGTACCAGC...CAGAGAGCACCTTGTGAGAGTTGGTTCTGATTCCATCATGTGAGCTCCAGGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035181.10 |
||
| 3UTR CAA 72 bp | TCCTCCAAGCTTTCAGGCATTAACGGTCCAAACCGGTaGCTTCTGTCATACCAGTGCTTGGCATCTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSKLSGINGPNR*LLSYQCLASAV Trigger: CACTGCAGATGCCAAGCACTGGTATGACAGAAGCAACCGGTTTGGACCGTTAATGCCTGAAAGCTTGGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177402.8 |
||
| 3UTR CAA 72 bp | AAACTCAGAGAGATAGCATATGAACCAGGGTGTACATaGGAAGATCCTGTGCTGGCCGCCTCCTCCGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: KLREIAYEPGCT*EDPVLAASSES Trigger: GGATTCGGAGGAGGCGGCCAGCACAGGATCTTCCAATGTACACCCTGGTTCATATGCTATCTCTCTGAGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189758.7 |
||
| CDS-3UTR GCA 90 bp | AGGCTTTCTACAGAACTAGATGCTGGCAGTTGCTGGCAGAGTCTGTGGACCAGGGGAGCTCAGCCAATTTaGTCAAGTCACATTGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: RLSTELDAGSCWQSLWTRGAQPI*SSHIDP Trigger: AGGATCAATGTGACTTGAGCAAATTGGCTGAGCTCC...CCTGGTCCACAGACTCTGCCAGCAACTGCCAGCATCTAGTTCTGTAGAAAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177402.8 ENSMUST00000189758.7 |
||
| CDS-3UTR GCA 90 bp | TCTAAGCCTGACAACCTGAGGGTGATCCCTGGAGCTCACATGATGGAATCAGAACAGATGATGGAGCTTTaGCTTGGCTTCTGTGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: SKPDNLRVIPGAHMMESEQMMEL*LGFCGL Trigger: CAGTCCACAGAAGCCAAGGCAAAGCTCCATCATCTG...TTCTGATTCCATCATGTGAGCTCCAGGGATCACCCTCAGGTTGTCAGGCTTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035181.10 |
||
| CDS-3UTR GCA 90 bp | CTGAAAAGGACCATGAGGAGTGAAAGAAAGCACACTGAAGAACTACAGATGACTCCAGTGCTTGGCATCTaGAGTGGTTCCCAGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LKRTMRSERKHTEELQMTPVLGI*SGSQAG Trigger: GCCAGCCTGGGAACCACTGCAGATGCCAAGCACTGG...AGTCATCTGTAGTTCTTCAGTGTGCTTTCTTTCACTCCTCATGGTCCTTTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000167674.2 |
||
| CDS-3UTR CCA 90 bp | TGGAGCTCACATGATGGAATCAGAACCAACTCTCACAAGGTGCTCTCTGACTTCATGAAAGGTGGTAGCTaGCCTTTGGCCAGAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WSSHDGIRTNSHKVLSDFMKGGS*PLARAP Trigger: AGGAGCTCTGGCCAAAGGCCAGCTACCACCTTTCAT...GAAGTCAGAGAGCACCTTGTGAGAGTTGGTTCTGATTCCATCATGTGAGCTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035181.10 |
||
| CDS-3UTR TCA 90 bp | TCTAAGCCTGACAACCTGAGGGTGATCCCTGGAGCTCACATGATGGAATCAGAAGTCCCGATCTGCTTCTaGAAAGCTCTGTACGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: SKPDNLRVIPGAHMMESEVPICF*KALYET Trigger: TGTTTCGTACAGAGCTTTTCAGAAGCAGATCGGGAC...TTCTGATTCCATCATGTGAGCTCCAGGGATCACCCTCAGGTTGTCAGGCTTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035181.10 |
||
| CDS-3UTR TCA 90 bp | TCTAAGCCTGACAACCTGAGGGTGATCCCTGGAGCTCACATGATGGAATCAGAATTTTCTACCTGTGTGTaGAGAAAGGTCCTTCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SKPDNLRVIPGAHMMESEFSTCV*RKVLRS Trigger: GCTCCGAAGGACCTTTCTTCACACACAGGTAGAAAA...TTCTGATTCCATCATGTGAGCTCCAGGGATCACCCTCAGGTTGTCAGGCTTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035181.10 |
||
| CDS-3UTR TCA 90 bp | CTGAAAAGGACCATGAGGAGTGAAAGAAAGCACACTGAAGAACTACAGATGACTAGACAGGACTGCCACTaGCAGAAGACGTGCGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LKRTMRSERKHTEELQMTRQDCH*QKTCAV Trigger: CACAGCGCACGTCTTCTGTCAGTGGCAGTCCTGTCT...AGTCATCTGTAGTTCTTCAGTGTGCTTTCTTTCACTCCTCATGGTCCTTTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000167674.2 |
||
| CDS-3UTR TCA 90 bp | TGGAGCTCACATGATGGAATCAGAACCAACTCTCACAAGGTGCTCTCTGACTTCTGGACAGCAGCTGGTTaGGATATAACCCCATCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: WSSHDGIRTNSHKVLSDFWTAAG*DITPSG Trigger: TCCAGATGGGGTTATATCTCAACCAGCTGCTGTCCA...GAAGTCAGAGAGCACCTTGTGAGAGTTGGTTCTGATTCCATCATGTGAGCTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000167674.2 |
||
| CDS-3UTR GCA 90 bp | ATCAGAACCAACTCTCACAAGGTGCTCTCTGACTTCCACACAAGTACAATGGTTTACTGGAAGAAGTCCTaGAGCTTCACCGGGGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: IRTNSHKVLSDFHTSTMVYWKKS*SFTGDC Trigger: GCAGTCCCCGGTGAAGCTGCAGGACTTCTTCCAGTA...AACCATTGTACTTGTGTGGAAGTCAGAGAGCACCTTGTGAGAGTTGGTTCTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035181.10 |
||
| CDS-3UTR GCA 90 bp | GAATCAGAACCAACTCTCACAAGGTGCTCTCTGACTTCCACACAAGTACAATGGCTGTTGACGATGGCATaGAAGGGTTCCCTCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: ESEPTLTRCSLTSTQVQWLLTMA*KGSLSI Trigger: GATGCTGAGGGAACCCTTGCATGCCATCGTCAACAG...CCATTGTACTTGTGTGGAAGTCAGAGAGCACCTTGTGAGAGTTGGTTCTGATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035181.10 |
||
| CDS-3UTR GCA 90 bp | ATCCCTGGAGCTCACATGATGGAATCAGAACCAACTCTCACAAGGTGCTCTCTGTTCTACAGAACTAGATaGTGGCAGTTGCTGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: IPGAHMMESEPTLTRCSLFYRTR*WQLLAE Trigger: CTCTGCCAGCAACTGCCAGCATCTAGTTCTGTAGAA...CAGAGAGCACCTTGTGAGAGTTGGTTCTGATTCCATCATGTGAGCTCCAGGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000167674.2 |
||
| CDS-3UTR CCA 90 bp | AATCCTCTAGGCAGCTGCTTTGACCTAGATTGTAGCACAACCCTGAGTCTGTCCTTGCCTTGGCTTCTGTaGACTGCAACCAGTAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: NPLGSCFDLDCSTTLSLSLPWLL*TATSNK Trigger: CTTGTTACTGGTTGCAGTCCACAGAAGCCAAGGCAA...GGACAGACTCAGGGTTGTGCTACAATCTAGGTCAAAGCAGCTGCCTAGAGGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189758.7 |
||
| CDS-3UTR TCA 90 bp | ATCCCTGGAGCTCACATGATGGAATCAGAACCAACTCTCACAAGGTGCTCTCTGCTGGAAGCTATTCAGTaGGCAAAACCCACTTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: IPGAHMMESEPTLTRCSLLEAIQ*AKPTSQ Trigger: TTGAGAAGTGGGTTTTGCTCACTGAATAGCTTCCAG...CAGAGAGCACCTTGTGAGAGTTGGTTCTGATTCCATCATGTGAGCTCCAGGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035181.10 |
||
| CDS-3UTR TCA 90 bp | GAATCAGAACCAACTCTCACAAGGTGCTCTCTGACTTCCACACAAGTACAATGGCCAGGACAACCTGTTTaGCCTTCAGGGCTTCTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ESEPTLTRCSLTSTQVQWPGQPV*PSGLLR Trigger: TCTTAGAAGCCCTGAAGGTCAAACAGGTTGTCCTGG...CCATTGTACTTGTGTGGAAGTCAGAGAGCACCTTGTGAGAGTTGGTTCTGATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035181.10 |
||
| CDS-3UTR GCA 90 bp | TGGAGCTCACATGATGGAATCAGAACCAACTCTCACAAGGTGCTCTCTGACTTCTCTGAGTTCTCTACATaGTCCTCCAAGCTTTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: WSSHDGIRTNSHKVLSDFSEFST*SSKLSG Trigger: GCCTGAAAGCTTGGAGGAGCATGTAGAGAACTCAGA...GAAGTCAGAGAGCACCTTGTGAGAGTTGGTTCTGATTCCATCATGTGAGCTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000167674.2 |
||
| CDS-3UTR CCA 90 bp | TCTAAGCCTGACAACCTGAGGGTGATCCCTGGAGCTCACATGATGGAATCAGAATTGAAAGCCAGAAGCTaGGAAGGCAATGTATTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SKPDNLRVIPGAHMMESELKARS*EGNVFW Trigger: CCAGAATACATTGCCTTCCCAGCTTCTGGCTTTCAA...TTCTGATTCCATCATGTGAGCTCCAGGGATCACCCTCAGGTTGTCAGGCTTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035181.10 |
||
| CDS-3UTR CCA 90 bp | TGGGTGCCTTCACCTGGCATAATTCTTCATACAACATCTTGGCACCACCTCTCTTTGCCTTGGCTTCTGTaGACTGCAACCAGTAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: WVPSPGIILHTTSWHHLSLPWLL*TATSNK Trigger: CTTGTTACTGGTTGCAGTCCACAGAAGCCAAGGCAA...AGAGAGGTGGTGCCAAGATGTTGTATGAAGAATTATGCCAGGTGAAGGCACCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177402.8 ENSMUST00000189758.7 |
||
| CDS-3UTR CCA 90 bp | TCACATGATGGAATCAGAACCAACTCTCACAAGGTGCTCTCTGACTTCCACACAGGAGTGGACAGCAGCTaGTTGAGATATAACCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: SHDGIRTNSHKVLSDFHTGVDSS*LRYNPI Trigger: GATGGGGTTATATCTCAACCAGCTGCTGTCCACTCC...TGTGTGGAAGTCAGAGAGCACCTTGTGAGAGTTGGTTCTGATTCCATCATGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000167674.2 |
||
| CDS-3UTR CCA 90 bp | TTTGGTAAGAACAATTCAGCTGGGGCATATGATTTTGTGGCATTGAACAGATGTGGCACTGAGCCTGCCTaGGTGCGGAGTCCACATTTC | + |
|
Preference number: 4 (lower is better) Translates to: FGKNNSAGAYDFVALNRCGTEPA*VRSPHF Trigger: GAAATGTGGACTCCGCACCCAGGCAGGCTCAGTGCC...ACATCTGTTCAATGCCACAAAATCATATGCCCCAGCTGAATTGTTCTTACCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000177402.8 ENSMUST00000189758.7 |
||
| CDS-3UTR TCA 90 bp | TCACATGATGGAATCAGAACCAACTCTCACAAGGTGCTCTCTGACTTCCACACAGCTCCAAGTCAGAATTaGAGCAAAGTCGGTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SHDGIRTNSHKVLSDFHTAPSQN*SKVGGR Trigger: TCTTCCACCGACTTTGCTTCAATTCTGACTTGGAGC...TGTGTGGAAGTCAGAGAGCACCTTGTGAGAGTTGGTTCTGATTCCATCATGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035181.10 |
||
| CDS-3UTR TCA 90 bp | GTTCATAAAGTTGCTTTGCCTCAGGACATAGACTCAGGAGGCTTTCTACAGAACCCAGGACAACCTGTTTaGCCTTCAGGGCTTCTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VHKVALPQDIDSGGFLQNPGQPV*PSGLLR Trigger: TCTTAGAAGCCCTGAAGGTCAAACAGGTTGTCCTGG...GTTCTGTAGAAAGCCTCCTGAGTCTATGTCCTGAGGCAAAGCAACTTTATGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177402.8 ENSMUST00000189758.7 |
||
| CDS-3UTR TCA 90 bp | ATCAGAACCAACTCTCACAAGGTGCTCTCTGACTTCCACACAAGTACAATGGTTTGGACAGCAGCTGGTTaGGATATAACCCCATCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: IRTNSHKVLSDFHTSTMVWTAAG*DITPSG Trigger: TCCAGATGGGGTTATATCTCAACCAGCTGCTGTCCA...AACCATTGTACTTGTGTGGAAGTCAGAGAGCACCTTGTGAGAGTTGGTTCTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000167674.2 |
||
| CDS-3UTR TCA 90 bp | TGGAGCTCACATGATGGAATCAGAACCAACTCTCACAAGGTGCTCTCTGACTTCTTCAGCTGGGGCATATaGTTTTGTGGCATTGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: WSSHDGIRTNSHKVLSDFFSWGI*FCGIEQ Trigger: CTGTTCAATGCCACAAAATCATATGCCCCAGCTGAA...GAAGTCAGAGAGCACCTTGTGAGAGTTGGTTCTGATTCCATCATGTGAGCTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000167674.2 |
||
| CDS-3UTR GCA 90 bp | TCACATGATGGAATCAGAACCAACTCTCACAAGGTGCTCTCTGACTTCCACACAAGAAAGGGAACGGGCTaGTTGGATCTTCTCTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SHDGIRTNSHKVLSDFHTRKGTG*LDLLFC Trigger: GCAAAAGAGAAGATCCAAGCAGCCCGTTCCCTTTCT...TGTGTGGAAGTCAGAGAGCACCTTGTGAGAGTTGGTTCTGATTCCATCATGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035181.10 |
||
| CDS-3UTR GCA 90 bp | TCACATGATGGAATCAGAACCAACTCTCACAAGGTGCTCTCTGACTTCCACACATTCTACAGAACTAGATaGTGGCAGTTGCTGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SHDGIRTNSHKVLSDFHTFYRTR*WQLLAE Trigger: CTCTGCCAGCAACTGCCAGCATCTAGTTCTGTAGAA...TGTGTGGAAGTCAGAGAGCACCTTGTGAGAGTTGGTTCTGATTCCATCATGTGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000167674.2 |
||
| CDS-3UTR GCA 90 bp | TCACATGATGGAATCAGAACCAACTCTCACAAGGTGCTCTCTGACTTCCACACACTTCTGTCATACCAGTaGTTGGCATCTGCAGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SHDGIRTNSHKVLSDFHTLLSYQ*LASAVV Trigger: AACCACTGCAGATGCCAAGCACTGGTATGACAGAAG...TGTGTGGAAGTCAGAGAGCACCTTGTGAGAGTTGGTTCTGATTCCATCATGTGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000167674.2 |
||
| CDS-3UTR CCA 90 bp | TCTAAGCCTGACAACCTGAGGGTGATCCCTGGAGCTCACATGATGGAATCAGAATATCTAGTGCTTCAGTaGGGTCATCGAAATGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: SKPDNLRVIPGAHMMESEYLVLQ*GHRNET Trigger: TGTCTCATTTCGATGACCCCACTGAAGCACTAGATA...TTCTGATTCCATCATGTGAGCTCCAGGGATCACCCTCAGGTTGTCAGGCTTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035181.10 |
||
| CDS-3UTR CCA 90 bp | TCTAAGCCTGACAACCTGAGGGTGATCCCTGGAGCTCACATGATGGAATCAGAATATTCTGTGAGCATTTaGCCGCTGCATGTTTTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: SKPDNLRVIPGAHMMESEYSVSI*PLHVFY Trigger: GTAGAAAACATGCAGCGGCCAAATGCTCACAGAATA...TTCTGATTCCATCATGTGAGCTCCAGGGATCACCCTCAGGTTGTCAGGCTTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035181.10 |
||
| CDS-3UTR CCA 90 bp | TCACATGATGGAATCAGAACCAACTCTCACAAGGTGCTCTCTGACTTCCACACATTGCCTTGGCTTCTGTaGACTGCAACCAGTAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: SHDGIRTNSHKVLSDFHTLPWLL*TATSNK Trigger: CTTGTTACTGGTTGCAGTCCACAGAAGCCAAGGCAA...TGTGTGGAAGTCAGAGAGCACCTTGTGAGAGTTGGTTCTGATTCCATCATGTGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035181.10 |
||
| 3UTR CAA 72 bp | CTGAAGCACGAGCATAAGGGGCCAGGTGTCTGCACTTaGTTCTTTATTCTTTCTGGCTCAACTGTCAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LKHEHKGPGVCT*FFILSGSTVKC Trigger: ACACTTGACAGTTGAGCCAGAAAGAATAAAGAACAAAGTGCAGACACCTGGCCCCTTATGCTCGTGCTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189758.7 |
||
| CDS-3UTR TCA 90 bp | CTGAAAAGGACCATGAGGAGTGAAAGAAAGCACACTGAAGAACTACAGATGACTAAAGGAGTCCATAGATaGTTTGGCGGATGGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LKRTMRSERKHTEELQMTKGVHR*FGGWAE Trigger: CTCAGCCCATCCGCCAAATCATCTATGGACTCCTTT...AGTCATCTGTAGTTCTTCAGTGTGCTTTCTTTCACTCCTCATGGTCCTTTTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035181.10 |
||
| CDS-3UTR GCA 90 bp | GAATCAGAACCAACTCTCACAAGGTGCTCTCTGACTTCCACACAAGTACAATGGGGAGCTCAGCCAATTTaGTCAAGTCACATTGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: ESEPTLTRCSLTSTQVQWGAQPI*SSHIDP Trigger: AGGATCAATGTGACTTGAGCAAATTGGCTGAGCTCC...CCATTGTACTTGTGTGGAAGTCAGAGAGCACCTTGTGAGAGTTGGTTCTGATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035181.10 |
||
| CDS-3UTR GCA 90 bp | ATCAGAACCAACTCTCACAAGGTGCTCTCTGACTTCCACACAAGTACAATGGTTCTTCTGTCATACCAGTaGTTGGCATCTGCAGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: IRTNSHKVLSDFHTSTMVLLSYQ*LASAVV Trigger: AACCACTGCAGATGCCAAGCACTGGTATGACAGAAG...AACCATTGTACTTGTGTGGAAGTCAGAGAGCACCTTGTGAGAGTTGGTTCTGAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000167674.2 |
||
| CDS-3UTR CCA 90 bp | TGGAGCTCACATGATGGAATCAGAACCAACTCTCACAAGGTGCTCTCTGACTTCGAAGGCAATGTATTCTaGGCTATATCTTCTGCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: WSSHDGIRTNSHKVLSDFEGNVF*AISSAC Trigger: ACACGCAGAAGATATAGCCCAGAATACATTGCCTTC...GAAGTCAGAGAGCACCTTGTGAGAGTTGGTTCTGATTCCATCATGTGAGCTCCA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035181.10 |
||
| CDS-3UTR CCA 90 bp | TCACATGATGGAATCAGAACCAACTCTCACAAGGTGCTCTCTGACTTCCACACACTTCATACAACATCTTaGCACCACCTCTCTGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SHDGIRTNSHKVLSDFHTLHTTS*HHLSVD Trigger: ATCCACAGAGAGGTGGTGCCAAGATGTTGTATGAAG...TGTGTGGAAGTCAGAGAGCACCTTGTGAGAGTTGGTTCTGATTCCATCATGTGA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035181.10 |
||
| CDS-3UTR CCA 90 bp | TGGAGCTCACATGATGGAATCAGAACCAACTCTCACAAGGTGCTCTCTGACTTCATGGGTGCCTTCACCTaGCATAATTCTTCATACAAC | + |
|
Preference number: 4 (lower is better) Translates to: WSSHDGIRTNSHKVLSDFMGAFT*HNSSYN Trigger: GTTGTATGAAGAATTATGCCAGGTGAAGGCACCCAT...GAAGTCAGAGAGCACCTTGTGAGAGTTGGTTCTGATTCCATCATGTGAGCTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000167674.2 |
||
| CDS-3UTR TCA 90 bp | TCACATGATGGAATCAGAACCAACTCTCACAAGGTGCTCTCTGACTTCCACACATTGCTCAAGTCACATTaGTCCTTGAGCAGTTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SHDGIRTNSHKVLSDFHTLLKSH*SLSSCF Trigger: AAAGCAACTGCTCAAGGATCAATGTGACTTGAGCAA...TGTGTGGAAGTCAGAGAGCACCTTGTGAGAGTTGGTTCTGATTCCATCATGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035181.10 |
||
| CDS-3UTR GCA 90 bp | GTTCATAAAGTTGCTTTGCCTCAGGACATAGACTCAGGAGGCTTTCTACAGAACGGAGCTCAGCCAATTTaGTCAAGTCACATTGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: VHKVALPQDIDSGGFLQNGAQPI*SSHIDP Trigger: AGGATCAATGTGACTTGAGCAAATTGGCTGAGCTCC...GTTCTGTAGAAAGCCTCCTGAGTCTATGTCCTGAGGCAAAGCAACTTTATGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177402.8 ENSMUST00000189758.7 |
||
| CDS-3UTR GCA 90 bp | CTGAAAAGGACCATGAGGAGTGAAAGAAAGCACACTGAAGAACTACAGATGACTTCTGAGTTCTCTACATaGTCCTCCAAGCTTTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LKRTMRSERKHTEELQMTSEFST*SSKLSG Trigger: GCCTGAAAGCTTGGAGGAGCATGTAGAGAACTCAGA...AGTCATCTGTAGTTCTTCAGTGTGCTTTCTTTCACTCCTCATGGTCCTTTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000167674.2 |
||
| CDS-3UTR CCA 90 bp | CTGAAAAGGACCATGAGGAGTGAAAGAAAGCACACTGAAGAACTACAGATGACTATGGGCAGGTTAACATaGTCATTTCCACACAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: LKRTMRSERKHTEELQMTMGRLT*SFPHST Trigger: GGTGCTGTGTGGAAATGACCATGTTAACCTGCCCAT...AGTCATCTGTAGTTCTTCAGTGTGCTTTCTTTCACTCCTCATGGTCCTTTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035181.10 |
||
| CDS-3UTR CCA 90 bp | TTTGGTAAGAACAATTCAGCTGGGGCATATGATTTTGTGGCATTGAACAGATGTGCTGGTACTCCTCCATaGAGCAGCAGAGAAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FGKNNSAGAYDFVALNRCAGTPP*SSREVP Trigger: AGGAACTTCTCTGCTGCTCCATGGAGGAGTACCAGC...ACATCTGTTCAATGCCACAAAATCATATGCCCCAGCTGAATTGTTCTTACCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176940.3 |
||
| 3UTR CAA 72 bp | CAACACTGGTGTGCTGTCATTGATAGGAGAGTTCTGTaGTTTGTGTCTGTACTACTGAAGCACGAGCATAAG | + |
|
Preference number: 4 (lower is better) Translates to: QHWCAVIDRRVL*FVSVLLKHEHK Trigger: CTTATGCTCGTGCTTCAGTAGTACAGACACAAACAACAGAACTCTCCTATCAATGACAGCACACCAGTGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189758.7 |
||
| CDS-3UTR GCA 90 bp | GAATCAGAACCAACTCTCACAAGGTGCTCTCTGACTTCCACACAAGTACAATGGGAAGTAATGGCAGAATaGATTGAGGGAAAAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ESEPTLTRCSLTSTQVQWEVMAE*IEGKAS Trigger: AGAAGCTTTTCCCTCAATGCATTCTGCCATTACTTC...CCATTGTACTTGTGTGGAAGTCAGAGAGCACCTTGTGAGAGTTGGTTCTGATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035181.10 |
||
| CDS-3UTR GCA 90 bp | TTTGGTAAGAACAATTCAGCTGGGGCATATGATTTTGTGGCATTGAACAGATGTCAGATGATGGAGCTTTaGCTTGGCTTCTGTGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: FGKNNSAGAYDFVALNRCQMMEL*LGFCGL Trigger: CAGTCCACAGAAGCCAAGGCAAAGCTCCATCATCTG...ACATCTGTTCAATGCCACAAAATCATATGCCCCAGCTGAATTGTTCTTACCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000177402.8 ENSMUST00000189758.7 |
||
| CDS-3UTR CCA 90 bp | GAATCAGAACCAACTCTCACAAGGTGCTCTCTGACTTCCACACAAGTACAATGGTTCAGATTTCTCCACTaGAAGCTATTCAGTGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ESEPTLTRCSLTSTQVQWFRFLH*KLFSEQ Trigger: TTGCTCACTGAATAGCTTCCAGTGGAGAAATCTGAA...CCATTGTACTTGTGTGGAAGTCAGAGAGCACCTTGTGAGAGTTGGTTCTGATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035181.10 |
||
| CDS-3UTR CCA 90 bp | CTGACTTCCACACAAGTACAATGGTTCTCCATCCCCAACACACATATAAATAAAGGAGTGGACAGCAGCTaGTTGAGATATAACCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: LTSTQVQWFSIPNTHINKGVDSS*LRYNPI Trigger: GATGGGGTTATATCTCAACCAGCTGCTGTCCACTCC...TTTATTTATATGTGTGTTGGGGATGGAGAACCATTGTACTTGTGTGGAAGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000167674.2 |
||
| CDS-3UTR TCA 90 bp | TTTGGTAAGAACAATTCAGCTGGGGCATATGATTTTGTGGCATTGAACAGATGTGCTCCAAGTCAGAATTaGAGCAAAGTCGGTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FGKNNSAGAYDFVALNRCAPSQN*SKVGGR Trigger: TCTTCCACCGACTTTGCTTCAATTCTGACTTGGAGC...ACATCTGTTCAATGCCACAAAATCATATGCCCCAGCTGAATTGTTCTTACCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176940.3 |
||
| CDS-3UTR TCA 90 bp | TCACATGATGGAATCAGAACCAACTCTCACAAGGTGCTCTCTGACTTCCACACAACATACGGACAAATATaGCACACAAACAGTGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: SHDGIRTNSHKVLSDFHTTYGQI*HTNSDS Trigger: TGAATCACTGTTTGTGTGTCATATTTGTCCGTATGT...TGTGTGGAAGTCAGAGAGCACCTTGTGAGAGTTGGTTCTGATTCCATCATGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035181.10 |
||
| CDS-3UTR TCA 90 bp | TTTGGTAAGAACAATTCAGCTGGGGCATATGATTTTGTGGCATTGAACAGATGTGTCCCGATCTGCTTCTaGAAAGCTCTGTACGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: FGKNNSAGAYDFVALNRCVPICF*KALYET Trigger: TGTTTCGTACAGAGCTTTTCAGAAGCAGATCGGGAC...ACATCTGTTCAATGCCACAAAATCATATGCCCCAGCTGAATTGTTCTTACCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176940.3 |
||
| CDS-3UTR TCA 90 bp | CTGAAAAGGACCATGAGGAGTGAAAGAAAGCACACTGAAGAACTACAGATGACTACAGGACAATTCCAGTaGTTGGCAAGTGTCATAATG | + |
|
Preference number: 4 (lower is better) Translates to: LKRTMRSERKHTEELQMTTGQFQ*LASVIM Trigger: CATTATGACACTTGCCAATCACTGGAATTGTCCTGT...AGTCATCTGTAGTTCTTCAGTGTGCTTTCTTTCACTCCTCATGGTCCTTTTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035181.10 |
||
| CDS-3UTR TCA 90 bp | GAATCAGAACCAACTCTCACAAGGTGCTCTCTGACTTCCACACAAGTACAATGGCTTTGTTCATGTTGTTaGAGTAATGGCAGAATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ESEPTLTRCSLTSTQVQWLCSCC*SNGRMH Trigger: ATGCATTCTGCCATTACTTCAACAACATGAACAAAG...CCATTGTACTTGTGTGGAAGTCAGAGAGCACCTTGTGAGAGTTGGTTCTGATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035181.10 |
||
| CDS-3UTR TCA 90 bp | CTGACTTCCACACAAGTACAATGGTTCTCCATCCCCAACACACATATAAATAAAGTGGGGTCATCGAAATaGGACAACCAGTTCAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LTSTQVQWFSIPNTHINKVGSSK*DNQFRS Trigger: ACTTCTGAACTGGTTGTCTCATTTCGATGACCCCAC...TTTATTTATATGTGTGTTGGGGATGGAGAACCATTGTACTTGTGTGGAAGTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035181.10 |
||
| CDS-3UTR TCA 90 bp | TTTGGTAAGAACAATTCAGCTGGGGCATATGATTTTGTGGCATTGAACAGATGTGTGGGGTCATCGAAATaGGACAACCAGTTCAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FGKNNSAGAYDFVALNRCVGSSK*DNQFRS Trigger: ACTTCTGAACTGGTTGTCTCATTTCGATGACCCCAC...ACATCTGTTCAATGCCACAAAATCATATGCCCCAGCTGAATTGTTCTTACCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176940.3 |
||
| CDS-3UTR GCA 90 bp | TTTGGTAAGAACAATTCAGCTGGGGCATATGATTTTGTGGCATTGAACAGATGTAGAAAGGGAACGGGCTaGTTGGATCTTCTCTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FGKNNSAGAYDFVALNRCRKGTG*LDLLFC Trigger: GCAAAAGAGAAGATCCAAGCAGCCCGTTCCCTTTCT...ACATCTGTTCAATGCCACAAAATCATATGCCCCAGCTGAATTGTTCTTACCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176940.3 |
||
| CDS-3UTR CCA 90 bp | TTTGGTAAGAACAATTCAGCTGGGGCATATGATTTTGTGGCATTGAACAGATGTATGGGCAGGTTAACATaGTCATTTCCACACAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: FGKNNSAGAYDFVALNRCMGRLT*SFPHST Trigger: GGTGCTGTGTGGAAATGACCATGTTAACCTGCCCAT...ACATCTGTTCAATGCCACAAAATCATATGCCCCAGCTGAATTGTTCTTACCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176940.3 |
||
| 3UTR CAA 72 bp | ATATTACTGGTGACTGTCAACACTGGTGTGCTGTCATaGATAGGAGAGTTCTGTTGTTTGTGTCTGTACTAC | + |
|
Preference number: 4 (lower is better) Translates to: ILLVTVNTGVLS*IGEFCCLCLYY Trigger: GTAGTACAGACACAAACAACAGAACTCTCCTATCAATGACAGCACACCAGTGTTGACAGTCACCAGTAATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189758.7 |
||
| CDS-3UTR TCA 90 bp | TTTGGTAAGAACAATTCAGCTGGGGCATATGATTTTGTGGCATTGAACAGATGTCTGGAAGCTATTCAGTaGGCAAAACCCACTTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FGKNNSAGAYDFVALNRCLEAIQ*AKPTSQ Trigger: TTGAGAAGTGGGTTTTGCTCACTGAATAGCTTCCAG...ACATCTGTTCAATGCCACAAAATCATATGCCCCAGCTGAATTGTTCTTACCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176940.3 |
||
| CDS-3UTR TCA 90 bp | CTGACTTCCACACAAGTACAATGGTTCTCCATCCCCAACACACATATAAATAAATTCTTTCCACTTCATTaGAAGCCAGAAGCTGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LTSTQVQWFSIPNTHINKFFPLH*KPEAGK Trigger: CTTCCCAGCTTCTGGCTTTCAATGAAGTGGAAAGAA...TTTATTTATATGTGTGTTGGGGATGGAGAACCATTGTACTTGTGTGGAAGTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035181.10 |
||
| CDS-3UTR TCA 90 bp | CTGACTTCCACACAAGTACAATGGTTCTCCATCCCCAACACACATATAAATAAATTCAGCTGGGGCATATaGTTTTGTGGCATTGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: LTSTQVQWFSIPNTHINKFSWGI*FCGIEQ Trigger: CTGTTCAATGCCACAAAATCATATGCCCCAGCTGAA...TTTATTTATATGTGTGTTGGGGATGGAGAACCATTGTACTTGTGTGGAAGTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000167674.2 |
||
| CDS-3UTR TCA 90 bp | TTTGGTAAGAACAATTCAGCTGGGGCATATGATTTTGTGGCATTGAACAGATGTACAGGACAATTCCAGTaGTTGGCAAGTGTCATAATG | + |
|
Preference number: 4 (lower is better) Translates to: FGKNNSAGAYDFVALNRCTGQFQ*LASVIM Trigger: CATTATGACACTTGCCAATCACTGGAATTGTCCTGT...ACATCTGTTCAATGCCACAAAATCATATGCCCCAGCTGAATTGTTCTTACCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176940.3 |
||
| CDS-3UTR GCA 90 bp | TTTGGTAAGAACAATTCAGCTGGGGCATATGATTTTGTGGCATTGAACAGATGTGAAGTAATGGCAGAATaGATTGAGGGAAAAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FGKNNSAGAYDFVALNRCEVMAE*IEGKAS Trigger: AGAAGCTTTTCCCTCAATGCATTCTGCCATTACTTC...ACATCTGTTCAATGCCACAAAATCATATGCCCCAGCTGAATTGTTCTTACCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176940.3 |
||
| CDS-3UTR CCA 90 bp | TTTGGTAAGAACAATTCAGCTGGGGCATATGATTTTGTGGCATTGAACAGATGTTTCAGATTTCTCCACTaGAAGCTATTCAGTGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FGKNNSAGAYDFVALNRCFRFLH*KLFSEQ Trigger: TTGCTCACTGAATAGCTTCCAGTGGAGAAATCTGAA...ACATCTGTTCAATGCCACAAAATCATATGCCCCAGCTGAATTGTTCTTACCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176940.3 |
||
| CDS-3UTR TCA 90 bp | TTTGGTAAGAACAATTCAGCTGGGGCATATGATTTTGTGGCATTGAACAGATGTACATACGGACAAATATaGCACACAAACAGTGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: FGKNNSAGAYDFVALNRCTYGQI*HTNSDS Trigger: TGAATCACTGTTTGTGTGTCATATTTGTCCGTATGT...ACATCTGTTCAATGCCACAAAATCATATGCCCCAGCTGAATTGTTCTTACCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176940.3 |
||
| CDS-3UTR TCA 90 bp | TTTGGTAAGAACAATTCAGCTGGGGCATATGATTTTGTGGCATTGAACAGATGTCTTTGTTCATGTTGTTaGAGTAATGGCAGAATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FGKNNSAGAYDFVALNRCLCSCC*SNGRMH Trigger: ATGCATTCTGCCATTACTTCAACAACATGAACAAAG...ACATCTGTTCAATGCCACAAAATCATATGCCCCAGCTGAATTGTTCTTACCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176940.3 |
||
| 3UTR CAA 72 bp | TTCTTTATTCTTTCTGGCTCAACTGTCAAGTGTACATaGTTCTGTCTGATTAGGTGGAACGTGAAATCATTG | + |
|
Preference number: 4 (lower is better) Translates to: FFILSGSTVKCT*FCLIRWNVKSL Trigger: CAATGATTTCACGTTCCACCTAATCAGACAGAACAATGTACACTTGACAGTTGAGCCAGAAAGAATAAAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189758.7 |
||
| 3UTR CAA 72 bp | TTCCAAATTTTATTAGTCCAAATTAGGATGAATCAGTaGACTGTCCTAGAATCTAAGTGTCCGGTTTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: FQILLVQIRMNQ*TVLESKCPVSL Trigger: GAGTGAAACCGGACACTTAGATTCTAGGACAGTCAACTGATTCATCCTAATTTGGACTAATAAAATTTGGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189758.7 |
||
| 3UTR CAA 72 bp | AGTATATGCAGCATTAAGATTATAAGGTATTACTATTaGCTGAAAAGGACCATGAGGAGTGAAAGAAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SICSIKIIRYYY*LKRTMRSERKH Trigger: GTGCTTTCTTTCACTCCTCATGGTCCTTTTCAGCAAATAGTAATACCTTATAATCTTAATGCTGCATATACT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000167674.2 |
||
| CDS TCA 90 bp | ACATCTTGGCACCACCTCTCTGTGGATCTTCAGTGCCAGGGCTGTTaGCGATGGCATGCAAGGGTTCCCTCAGCATCCCCAGCAGTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TSWHHLSVDLQCQGC*RWHARVPSASPAVG Trigger: CCCTACTGCTGGGGATGCTGAGGGAACCCTTGCATGCCATCGTCAACAGCCCTGGCACTGAAGATCCACAGAGAGGTGGTGCCAAGATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000123807.8 |
||
| CDS-3UTR CAA 90 bp | CAGAAGACGTGCGCTGTGTCTAAATCCACTCTTGGACCCGGCCGCATGGGTGCCAGCTCCAAGTCAGAATaGAAGCAAAGTCGGTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QKTCAVSKSTLGPGRMGASSKSE*KQSRWK Trigger: CTTCCACCGACTTTGCTTCAATTCTGACTTGGAGCT...GGCACCCATGCGGCCGGGTCCAAGAGTGGATTTAGACACAGCGCACGTCTTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176350.5 |
||
| CDS-3UTR CAA 90 bp | AGGGGCAGTGCTTGGCATCTGCAGTGGTTCCCAGGCTGGCAACCTTTTTCTTCTGCAGATGATGGAGCTTaGCCTTGGCTTCTGTGGACT | + |
|
Preference number: 5 (lower is better) Translates to: RGSAWHLQWFPGWQPFSSADDGA*PWLLWT Trigger: AGTCCACAGAAGCCAAGGCAAAGCTCCATCATCTGC...AGAAGAAAAAGGTTGCCAGCCTGGGAACCACTGCAGATGCCAAGCACTGCCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189758.7 |
||
| CDS-3UTR CAA 90 bp | ACCAGGCTTCCGTTGTACAACCAAGTTAGGTTTGGCTCTGGCAGAGGAGTGGACGCAGATGATGGAGCTTaGCCTTGGCTTCTGTGGACT | + |
|
Preference number: 5 (lower is better) Translates to: TRLPLYNQVRFGSGRGVDADDGA*PWLLWT Trigger: AGTCCACAGAAGCCAAGGCAAAGCTCCATCATCTGC...GTCCACTCCTCTGCCAGAGCCAAACCTAACTTGGTTGTACAACGGAAGCCTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177402.8 ENSMUST00000189758.7 |
||
| CDS-3UTR CAA 90 bp | TGGAGCTCACATGATGGAATCAGAACCAACTCTCACAAGGTGCTCTCTGACTTCGCAGATGATGGAGCTTaGCCTTGGCTTCTGTGGACT | + |
|
Preference number: 5 (lower is better) Translates to: WSSHDGIRTNSHKVLSDFADDGA*PWLLWT Trigger: AGTCCACAGAAGCCAAGGCAAAGCTCCATCATCTGC...GAAGTCAGAGAGCACCTTGTGAGAGTTGGTTCTGATTCCATCATGTGAGCTCCA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035181.10 |
||
| CDS-3UTR CAA 90 bp | TGGAGCTCACATGATGGAATCAGAACCAACTCTCACAAGGTGCTCTCTGACTTCGTGGACAGCAGCTGGTaGAGATATAACCCCATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: WSSHDGIRTNSHKVLSDFVDSSW*RYNPIW Trigger: CCAGATGGGGTTATATCTCAACCAGCTGCTGTCCAC...GAAGTCAGAGAGCACCTTGTGAGAGTTGGTTCTGATTCCATCATGTGAGCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000167674.2 |
||
| CDS-3UTR CAA 90 bp | TCACATGATGGAATCAGAACCAACTCTCACAAGGTGCTCTCTGACTTCCACACAACTAGATGCTGGCAGTaGCTGGCAGAGTCTGTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SHDGIRTNSHKVLSDFHTTRCWQ*LAESVD Trigger: GTCCACAGACTCTGCCAGCAACTGCCAGCATCTAGT...TGTGTGGAAGTCAGAGAGCACCTTGTGAGAGTTGGTTCTGATTCCATCATGTGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000167674.2 |
||
| CDS-3UTR CAA 90 bp | GATATAACCCCATCTGGAGACAGGACTGCCACTGACAGAAGACGTGCGCTGTGTTTTGCTCAAGTCACATaGATCCTTGAGCAGTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: DITPSGDRTATDRRRALCFAQVT*ILEQLL Trigger: AAGCAACTGCTCAAGGATCAATGTGACTTGAGCAAA...ACACAGCGCACGTCTTCTGTCAGTGGCAGTCCTGTCTCCAGATGGGGTTATATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000177402.8 ENSMUST00000189758.7 |
||
| CDS TCA 90 bp | CTATATCTTCTGCGTGTGATGGGCCATTCAAAAGGAGTCCATAGATaGTTTGGCGGATGGGCTGAGATATTCTGTGAGCATTTGGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: LYLLRVMGHSKGVHR*FGGWAEIFCEHLAA Trigger: AGCGGCCAAATGCTCACAGAATATCTCAGCCCATCCGCCAAATCATCTATGGACTCCTTTTGAATGGCCCATCACACGCAGAAGATATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000123807.8 |
||
| CDS-3UTR CAA 90 bp | TGGAGCTCACATGATGGAATCAGAACCAACTCTCACAAGGTGCTCTCTGACTTCGAGTCCATAGATGATTaGGCGGATGGGCTGAGATAT | + |
|
Preference number: 5 (lower is better) Translates to: WSSHDGIRTNSHKVLSDFESIDD*ADGLRY Trigger: ATATCTCAGCCCATCCGCCAAATCATCTATGGACTC...GAAGTCAGAGAGCACCTTGTGAGAGTTGGTTCTGATTCCATCATGTGAGCTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035181.10 |
||
| CDS-3UTR CAA 90 bp | GCTCCTCCAAGCTTTCAGGCATTAACGGTCCAAACCGGTTGCTTCTGTCATACCTTTGCTCAAGTCACATaGATCCTTGAGCAGTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: APPSFQALTVQTGCFCHTFAQVT*ILEQLL Trigger: AAGCAACTGCTCAAGGATCAATGTGACTTGAGCAAA...GGTATGACAGAAGCAACCGGTTTGGACCGTTAATGCCTGAAAGCTTGGAGGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177402.8 |
||
| CDS-3UTR CAA 90 bp | CTGAAAAGGACCATGAGGAGTGAAAGAAAGCACACTGAAGAACTACAGATGACTACTAGATGCTGGCAGTaGCTGGCAGAGTCTGTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LKRTMRSERKHTEELQMTTRCWQ*LAESVD Trigger: GTCCACAGACTCTGCCAGCAACTGCCAGCATCTAGT...AGTCATCTGTAGTTCTTCAGTGTGCTTTCTTTCACTCCTCATGGTCCTTTTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000167674.2 |
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| CDS CCA 90 bp | CTTTCCACTTCATTGAAAGCCAGAAGCTGGGAAGGCAATGTATTCTaGGCTATATCTTCTGCGTGTGATGGGCCATTCAAAAGGAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LSTSLKARSWEGNVF*AISSACDGPFKRSP Trigger: TGGACTCCTTTTGAATGGCCCATCACACGCAGAAGATATAGCCCAGAATACATTGCCTTCCCAGCTTCTGGCTTTCAATGAAGTGGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000123807.8 |
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| CDS-3UTR CAA 90 bp | GAATCAGAACCAACTCTCACAAGGTGCTCTCTGACTTCCACACAAGTACAATGGAGCTCCAAGTCAGAATaGAAGCAAAGTCGGTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ESEPTLTRCSLTSTQVQWSSKSE*KQSRWK Trigger: CTTCCACCGACTTTGCTTCAATTCTGACTTGGAGCT...CCATTGTACTTGTGTGGAAGTCAGAGAGCACCTTGTGAGAGTTGGTTCTGATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035181.10 |
||
| CDS-3UTR CAA 90 bp | ATCCCTGGAGCTCACATGATGGAATCAGAACCAACTCTCACAAGGTGCTCTCTGTTTGCTCAAGTCACATaGATCCTTGAGCAGTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: IPGAHMMESEPTLTRCSLFAQVT*ILEQLL Trigger: AAGCAACTGCTCAAGGATCAATGTGACTTGAGCAAA...CAGAGAGCACCTTGTGAGAGTTGGTTCTGATTCCATCATGTGAGCTCCAGGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035181.10 |
||
| CDS-3UTR CAA 90 bp | CTGACTTCCACACAAGTACAATGGTTCTCCATCCCCAACACACATATAAATAAATCAGTGCCAGGGCTGTaGACGATGGCATGCAAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LTSTQVQWFSIPNTHINKSVPGL*TMACKG Trigger: ACCCTTGCATGCCATCGTCAACAGCCCTGGCACTGA...TTTATTTATATGTGTGTTGGGGATGGAGAACCATTGTACTTGTGTGGAAGTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035181.10 |
||
| CDS CCA 90 bp | AGACGTACTTTACTTATGAATGTGTCCATGATGGGCAGGTTAACATaGTCATTTCCACACAGCACCGCAAAGAGAGGTAGTAGAGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RRTLLMNVSMMGRLT*SFPHSTAKRGSRAL Trigger: CAAAGCTCTACTACCTCTCTTTGCGGTGCTGTGTGGAAATGACCATGTTAACCTGCCCATCATGGACACATTCATAAGTAAAGTACGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035181.10 ENSMUST00000123807.8 ENSMUST00000176940.3 |
||
| CDS-3UTR CAA 90 bp | GAATCAGAACCAACTCTCACAAGGTGCTCTCTGACTTCCACACAAGTACAATGGATATTCTGTGAGCATTaGGCCGCTGCATGTTTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: ESEPTLTRCSLTSTQVQWIFCEH*AAACFL Trigger: TAGAAAACATGCAGCGGCCAAATGCTCACAGAATAT...CCATTGTACTTGTGTGGAAGTCAGAGAGCACCTTGTGAGAGTTGGTTCTGATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035181.10 |
||
| CDS TCA 90 bp | ACAATTCCAGTGATTGGCAAGTGTCATAATGTCCCGATCTGCTTCTaGAAAGCTCTGTACGAAACATACCTCAAGCCTGATCAAAACCTG | + |
|
Preference number: 5 (lower is better) Translates to: TIPVIGKCHNVPICF*KALYETYLKPDQNL Trigger: CAGGTTTTGATCAGGCTTGAGGTATGTTTCGTACAGAGCTTTTCAGAAGCAGATCGGGACATTATGACACTTGCCAATCACTGGAATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035181.10 ENSMUST00000123807.8 ENSMUST00000176940.3 |
||
| CDS-3UTR CAA 90 bp | TTTGGTAAGAACAATTCAGCTGGGGCATATGATTTTGTGGCATTGAACAGATGTAGCTCCAAGTCAGAATaGAAGCAAAGTCGGTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FGKNNSAGAYDFVALNRCSSKSE*KQSRWK Trigger: CTTCCACCGACTTTGCTTCAATTCTGACTTGGAGCT...ACATCTGTTCAATGCCACAAAATCATATGCCCCAGCTGAATTGTTCTTACCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176940.3 |
||
| CDS-3UTR CAA 90 bp | CTGACTTCCACACAAGTACAATGGTTCTCCATCCCCAACACACATATAAATAAACTCGATCCTTCAAAGTaGTCAGCTTTTTATCTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LTSTQVQWFSIPNTHINKLDPSK*SAFYLK Trigger: TTTCAGATAAAAAGCTGACAACTTTGAAGGATCGAG...TTTATTTATATGTGTGTTGGGGATGGAGAACCATTGTACTTGTGTGGAAGTCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035181.10 |
||
| CDS-3UTR CAA 90 bp | TTTGGTAAGAACAATTCAGCTGGGGCATATGATTTTGTGGCATTGAACAGATGTCTCGATCCTTCAAAGTaGTCAGCTTTTTATCTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: FGKNNSAGAYDFVALNRCLDPSK*SAFYLK Trigger: TTTCAGATAAAAAGCTGACAACTTTGAAGGATCGAG...ACATCTGTTCAATGCCACAAAATCATATGCCCCAGCTGAATTGTTCTTACCAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000176940.3 |
||
| CDS TCA 90 bp | TCTGAAATGTCACATCCTCCATCTAATACAACATACGGACAAATATaGCACACAAACAGTGATTCAAAGAATTTCTGTACAACATCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: SEMSHPPSNTTYGQI*HTNSDSKNFCTTSA Trigger: CGCAGATGTTGTACAGAAATTCTTTGAATCACTGTTTGTGTGTCATATTTGTCCGTATGTTGTATTAGATGGAGGATGTGACATTTCAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000176940.3 |
||
| CDS GCA 72 bp | TGTGGATCTTCAGTGCCAGGGCTGTTGACGATGGCATaGAAGGGTTCCCTCAGCATCCCCAGCAGTAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: CGSSVPGLLTMA*KGSLSIPSSRA Trigger: GGCCCTACTGCTGGGGATGCTGAGGGAACCCTTGCATGCCATCGTCAACAGCCCTGGCACTGAAGATCCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000123807.8 |
||
| CDS CAA 90 bp | AACATCTTGGCACCACCTCTCTGTGGATCTTCAGTGCCAGGGCTGTaGACGATGGCATGCAAGGGTTCCCTCAGCATCCCCAGCAGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: NILAPPLCGSSVPGL*TMACKGSLSIPSSR Trigger: CCTACTGCTGGGGATGCTGAGGGAACCCTTGCATGCCATCGTCAACAGCCCTGGCACTGAAGATCCACAGAGAGGTGGTGCCAAGATGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000123807.8 |
||
| CDS GCA 72 bp | CCATACTGGAAGAAGTCCTGCAGCTTCACCGGGGACTaGTGGTACTCCTCCATGGAGCAGCAGAGAAGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: PYWKKSCSFTGD*WYSSMEQQRSS Trigger: GGAACTTCTCTGCTGCTCCATGGAGGAGTACCAGCAGTCCCCGGTGAAGCTGCAGGACTTCTTCCAGTATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035181.10 ENSMUST00000123807.8 ENSMUST00000176940.3 |
||
| CDS CCA 72 bp | CGGAGCACCAAAGCATCACTGATGAAAGGTGGTAGCTaGCCTTTGGCCAGAGCTCCTAGCACCCACTCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: RSTKASLMKGGS*PLARAPSTHSG Trigger: ACCAGAGTGGGTGCTAGGAGCTCTGGCCAAAGGCCAGCTACCACCTTTCATCAGTGATGCTTTGGTGCTCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000123807.8 |
||
| CDS CAA 90 bp | CTTCGGAGCACCAAAGCATCACTGATGAAAGGTGGTAGCTGGCCTTaGGCCAGAGCTCCTAGCACCCACTCTGGTAGACCCAGATCCGAA | + |
|
Preference number: 6 (lower is better) Translates to: LRSTKASLMKGGSWP*ARAPSTHSGRPRSE Trigger: TTCGGATCTGGGTCTACCAGAGTGGGTGCTAGGAGCTCTGGCCAAAGGCCAGCTACCACCTTTCATCAGTGATGCTTTGGTGCTCCGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000123807.8 |
||
| CDS CAA 72 bp | ACCAAAGCATCACTGATGAAAGGTGGTAGCTGGCCTTaGGCCAGAGCTCCTAGCACCCACTCTGGTAGACCC | + |
|
Preference number: 6 (lower is better) Translates to: TKASLMKGGSWP*ARAPSTHSGRP Trigger: GGGTCTACCAGAGTGGGTGCTAGGAGCTCTGGCCAAAGGCCAGCTACCACCTTTCATCAGTGATGCTTTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000123807.8 |
||
| CDS CCA 72 bp | TACTGGAAGAAGTCCTGCAGCTTCACCGGGGACTGCTaGTACTCCTCCATGGAGCAGCAGAGAAGTTCCTTA | + |
|
Preference number: 6 (lower is better) Translates to: YWKKSCSFTGDC*YSSMEQQRSSL Trigger: TAAGGAACTTCTCTGCTGCTCCATGGAGGAGTACCAGCAGTCCCCGGTGAAGCTGCAGGACTTCTTCCAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035181.10 ENSMUST00000123807.8 ENSMUST00000176940.3 |
||
| CDS CAA 90 bp | ATGGGCAACTTCAGAAAAGTAGGGATGGACTCCAGGACAACCTGTTaGACCTTCAGGGCTTCTAAGAGAAGCATCTGCCGCCTAGCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: MGNFRKVGMDSRTTC*TFRASKRSICRLAK Trigger: CTTGGCTAGGCGGCAGATGCTTCTCTTAGAAGCCCTGAAGGTCAAACAGGTTGTCCTGGAGTCCATCCCTACTTTTCTGAAGTTGCCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035181.10 ENSMUST00000123807.8 ENSMUST00000177402.8 ENSMUST00000189758.7 |
||
| CDS GCA 72 bp | CACATTCCCACCCCCACCAAGAGAAAGGGAACGGGCTaGTTGGATCTTCTCTTTTGCTCGATCCTTCAAAGT | + |
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Preference number: 6 (lower is better) Translates to: HIPTPTKRKGTG*LDLLFCSILQS Trigger: ACTTTGAAGGATCGAGCAAAAGAGAAGATCCAAGCAGCCCGTTCCCTTTCTCTTGGTGGGGGTGGGAATGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035181.10 ENSMUST00000123807.8 ENSMUST00000176940.3 |
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| CDS CCA 72 bp | TTCCCACCCCCACCAAGAGAAAGGGAACGGGCTGCTTaGATCTTCTCTTTTGCTCGATCCTTCAAAGTTGTC | + |
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Preference number: 6 (lower is better) Translates to: FPPPPRERERAA*IFSFARSFKVV Trigger: GACAACTTTGAAGGATCGAGCAAAAGAGAAGATCCAAGCAGCCCGTTCCCTTTCTCTTGGTGGGGGTGGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035181.10 ENSMUST00000123807.8 ENSMUST00000176940.3 |
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| CDS CCA 72 bp | GTGCCTTCACCTGGCATAATTCTTCATACAACATCTTaGCACCACCTCTCTGTGGATCTTCAGTGCCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: VPSPGIILHTTS*HHLSVDLQCQG Trigger: GCCCTGGCACTGAAGATCCACAGAGAGGTGGTGCCAAGATGTTGTATGAAGAATTATGCCAGGTGAAGGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000123807.8 |
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| CDS CAA 72 bp | GGTGCCTTCACCTGGCATAATTCTTCATACAACATCTaGGCACCACCTCTCTGTGGATCTTCAGTGCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: GAFTWHNSSYNI*APPLCGSSVPG Trigger: CCCTGGCACTGAAGATCCACAGAGAGGTGGTGCCAAGATGTTGTATGAAGAATTATGCCAGGTGAAGGCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000123807.8 |
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| CDS CAA 72 bp | ATTCCCACCCCCACCAAGAGAAAGGGAACGGGCTGCTaGGATCTTCTCTTTTGCTCGATCCTTCAAAGTTGT | + |
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Preference number: 6 (lower is better) Translates to: IPTPTKRKGTGC*DLLFCSILQSC Trigger: ACAACTTTGAAGGATCGAGCAAAAGAGAAGATCCAAGCAGCCCGTTCCCTTTCTCTTGGTGGGGGTGGGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035181.10 ENSMUST00000123807.8 ENSMUST00000176940.3 |
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| CDS CAA 72 bp | TTCAGAAAAGTAGGGATGGACTCCAGGACAACCTGTTaGACCTTCAGGGCTTCTAAGAGAAGCATCTGCCGC | + |
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Preference number: 6 (lower is better) Translates to: FRKVGMDSRTTC*TFRASKRSICR Trigger: GCGGCAGATGCTTCTCTTAGAAGCCCTGAAGGTCAAACAGGTTGTCCTGGAGTCCATCCCTACTTTTCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035181.10 ENSMUST00000123807.8 ENSMUST00000177402.8 ENSMUST00000189758.7 |
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| CDS TCA 72 bp | CTGCGTGTGATGGGCCATTCAAAAGGAGTCCATAGATaGTTTGGCGGATGGGCTGAGATATTCTGTGAGCAT | + |
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Preference number: 6 (lower is better) Translates to: LRVMGHSKGVHR*FGGWAEIFCEH Trigger: ATGCTCACAGAATATCTCAGCCCATCCGCCAAATCATCTATGGACTCCTTTTGAATGGCCCATCACACGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000123807.8 |
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| CDS CAA 90 bp | CACCCCCACCAAGAGAAAGGGAACGGGCTGCTTGGATCTTCTCTTTaGCTCGATCCTTCAAAGTTGTCAGCTTTTTATCTGAAATGTCAC | + |
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Preference number: 6 (lower is better) Translates to: HPHQEKGNGLLGSSL*LDPSKLSAFYLKCH Trigger: GTGACATTTCAGATAAAAAGCTGACAACTTTGAAGGATCGAGCAAAAGAGAAGATCCAAGCAGCCCGTTCCCTTTCTCTTGGTGGGGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000035181.10 ENSMUST00000123807.8 ENSMUST00000176940.3 |
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| CDS CAA 90 bp | GGGAACGGGCTGCTTGGATCTTCTCTTTTGCTCGATCCTTCAAAGTaGTCAGCTTTTTATCTGAAATGTCACATCCTCCATCTGAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: GNGLLGSSLLLDPSK*SAFYLKCHILHLSS Trigger: GGAGCTCAGATGGAGGATGTGACATTTCAGATAAAAAGCTGACAACTTTGAAGGATCGAGCAAAAGAGAAGATCCAAGCAGCCCGTTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123807.8 |
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| CDS CCA 72 bp | GATTTGGCGGATGGGCTGAGATATTCTGTGAGCATTTaGCCGCTGCATGTTTTCTACCTGTGTGTGAAGAAA | + |
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Preference number: 6 (lower is better) Translates to: DLADGLRYSVSI*PLHVFYLCVKK Trigger: TTTCTTCACACACAGGTAGAAAACATGCAGCGGCCAAATGCTCACAGAATATCTCAGCCCATCCGCCAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000123807.8 |
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| CDS CCA 72 bp | TTACTTATGAATGTGTCCATGATGGGCAGGTTAACATaGTCATTTCCACACAGCACCGCAAAGAGAGGTAGT | + |
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Preference number: 6 (lower is better) Translates to: LLMNVSMMGRLT*SFPHSTAKRGS Trigger: ACTACCTCTCTTTGCGGTGCTGTGTGGAAATGACCATGTTAACCTGCCCATCATGGACACATTCATAAGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035181.10 ENSMUST00000123807.8 ENSMUST00000176940.3 |
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| CDS CAA 72 bp | CAGCAGAGAAGTTCCTTAACATTTTCTCGACTCTTCTaGGGGAGAGACTTCAGAACGTTATCTAGTGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: QQRSSLTFSRLF*GRDFRTLSSAS Trigger: TGAAGCACTAGATAACGTTCTGAAGTCTCTCCCCAAGAAGAGTCGAGAAAATGTTAAGGAACTTCTCTGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035181.10 ENSMUST00000123807.8 ENSMUST00000176940.3 |
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| CDS CAA 90 bp | GGGAACGGGCTGCTTGGATCTTCTCTTTTGCTCGATCCTTCAAAGTaGTCAGCTTTTTATCTGAAATGTCACATCCTCCATCTAATACAA | + |
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Preference number: 6 (lower is better) Translates to: GNGLLGSSLLLDPSK*SAFYLKCHILHLIQ Trigger: TTGTATTAGATGGAGGATGTGACATTTCAGATAAAAAGCTGACAACTTTGAAGGATCGAGCAAAAGAGAAGATCCAAGCAGCCCGTTCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000176940.3 |
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| CDS CAA 90 bp | GCAGAATGCATTGAGGGAAAAGCTTCTGGCGGGAATGTAGTAATCTaGTGTATCTTTAATAGTGTTCAGATTTCTCCACTGGAAGCTATT | + |
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Preference number: 6 (lower is better) Translates to: AECIEGKASGGNVVI*CIFNSVQISPLEAI Trigger: AATAGCTTCCAGTGGAGAAATCTGAACACTATTAAAGATACACAAGATTACTACATTCCCGCCAGAAGCTTTTCCCTCAATGCATTCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035181.10 ENSMUST00000123807.8 ENSMUST00000176940.3 |
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| CDS CCA 72 bp | TCTTGTGTATCTTTAATAGTGTTCAGATTTCTCCACTaGAAGCTATTCAGTGAGCAAAACCCACTTCTCAAG | + |
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Preference number: 6 (lower is better) Translates to: SCVSLIVFRFLH*KLFSEQNPLLK Trigger: CTTGAGAAGTGGGTTTTGCTCACTGAATAGCTTCCAGTGGAGAAATCTGAACACTATTAAAGATACACAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035181.10 ENSMUST00000123807.8 ENSMUST00000176940.3 |
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| CDS CAA 72 bp | ATTGAGGGAAAAGCTTCTGGCGGGAATGTAGTAATCTaGTGTATCTTTAATAGTGTTCAGATTTCTCCACTG | + |
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Preference number: 6 (lower is better) Translates to: IEGKASGGNVVI*CIFNSVQISPL Trigger: CAGTGGAGAAATCTGAACACTATTAAAGATACACAAGATTACTACATTCCCGCCAGAAGCTTTTCCCTCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035181.10 ENSMUST00000123807.8 ENSMUST00000176940.3 |
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| CDS TCA 72 bp | TCACATCCTCCATCTAATACAACATACGGACAAATATaGCACACAAACAGTGATTCAAAGAATTTCTGTACA | + |
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Preference number: 6 (lower is better) Translates to: SHPPSNTTYGQI*HTNSDSKNFCT Trigger: TGTACAGAAATTCTTTGAATCACTGTTTGTGTGTCATATTTGTCCGTATGTTGTATTAGATGGAGGATGTGA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035181.10 ENSMUST00000176940.3 |
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