Pregenerated sensors for ARL8B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030105Ensembl transcript IDs: ENSMUST00000032196.9, ENSMUST00000204483.2
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAAGGAGCCAGAGCTCTCTCACTCAGCGCGGCTAGGTGGCCACATTaGTGGCCCCCTCTCTACCCTGCCAGAATCCAGTCCTGGGATTAC | + |
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Preference number: 1 (lower is better) Translates to: EGARALSLSAARWPH*WPPLYPARIQSWDY Trigger: GTAATCCCAGGACTGGATTCTGGCAGGGTAGAGAGGGGGCCATCAATGTGGCCACCTAGCCGCGCTGAGTGAGAGAGCTCTGGCTCCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032196.9 |
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| 3UTR CCA 90 bp | TCAACACCTCGGCCAGCTGAGGCAGCCACCTTCCAGCACAGTCTGTaGAGCCCTTTCCAGAGTGATTATCTTCCCACTCGAGTCCAAAGG | + |
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Preference number: 1 (lower is better) Translates to: STPRPAEAATFQHSL*SPFQSDYLPTRVQR Trigger: CCTTTGGACTCGAGTGGGAAGATAATCACTCTGGAAAGGGCTCCACAGACTGTGCTGGAAGGTGGCTGCCTCAGCTGGCCGAGGTGTTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032196.9 |
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| 3UTR GCA 90 bp | AGTCCTGGGATTACAGACAAAGCACACTGTGGGCCTAACATCTACTaGCGGGGACCCCAACTTCAGGTTAGGAGGCAAGTGCTTTATCCA | + |
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Preference number: 1 (lower is better) Translates to: SPGITDKAHCGPNIY*RGPQLQVRRQVLYP Trigger: TGGATAAAGCACTTGCCTCCTAACCTGAAGTTGGGGTCCCCGGCAGTAGATGTTAGGCCCACAGTGTGCTTTGTCTGTAATCCCAGGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032196.9 |
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| 3UTR CCA 90 bp | AAGTCAGGAATTAAGGGTGGCATGCAGCAGCACAGGGTGGGTGCCTaGAGACAAAGAACAGACGTGGATTCAGATGAAGTCGGACATTCT | + |
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Preference number: 1 (lower is better) Translates to: KSGIKGGMQQHRVGA*RQRTDVDSDEVGHS Trigger: AGAATGTCCGACTTCATCTGAATCCACGTCTGTTCTTTGTCTCCAGGCACCCACCCTGTGCTGCTGCATGCCACCCTTAATTCCTGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032196.9 |
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| 3UTR GCA 90 bp | TCTGGACCTCGTTTAGGCTTCCACCCTCCAGGCCTTCTGAGAGGATaGAGTTACCAAATCAATGTCAGATGCAAAAGGAAGTCACTCTCC | + |
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Preference number: 1 (lower is better) Translates to: SGPRLGFHPPGLLRG*SYQINVRCKRKSLS Trigger: GGAGAGTGACTTCCTTTTGCATCTGACATTGATTTGGTAACTGCATCCTCTCAGAAGGCCTGGAGGGTGGAAGCCTAAACGAGGTCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032196.9 |
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| 3UTR TCA 90 bp | GGCTTATGTTGGGTATCTTCCGCAGTCATTTTCTACCTTAACTCCTaGAGCAGTGTATGCTCAGAAGGAGCCAGAGCTCTCTCACTCAGC | + |
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Preference number: 1 (lower is better) Translates to: GLCWVSSAVIFYLNS*SSVCSEGARALSLS Trigger: GCTGAGTGAGAGAGCTCTGGCTCCTTCTGAGCATACACTGCTTCAGGAGTTAAGGTAGAAAATGACTGCGGAAGATACCCAACATAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032196.9 |
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| 3UTR CCA 90 bp | GCATGCAGCAGCACAGGGTGGGTGCCTGGAGACAAAGAACAGACGTaGATTCAGATGAAGTCGGACATTCTTAAAGGGTTTTATTACATT | + |
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Preference number: 1 (lower is better) Translates to: ACSSTGWVPGDKEQT*IQMKSDILKGFYYI Trigger: AATGTAATAAAACCCTTTAAGAATGTCCGACTTCATCTGAATCCACGTCTGTTCTTTGTCTCCAGGCACCCACCCTGTGCTGCTGCATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032196.9 |
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| 3UTR TCA 90 bp | GCACAGGGTGGGTGCCTGGAGACAAAGAACAGACGTGGATTCAGATaGAGTCGGACATTCTTAAAGGGTTTTATTACATTAGCTAGAATG | + |
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Preference number: 1 (lower is better) Translates to: AQGGCLETKNRRGFR*SRTFLKGFITLARM Trigger: CATTCTAGCTAATGTAATAAAACCCTTTAAGAATGTCCGACTTCATCTGAATCCACGTCTGTTCTTTGTCTCCAGGCACCCACCCTGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032196.9 |
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| 3UTR TCA 90 bp | TTAGAAGAGCAACTTAAGAGGAAGTCTGTAATGCTCCCGATTGCATaGCTAGTTTTCTCCTTAAGTCTCCTGACTCACAAGTGTGCACTG | + |
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Preference number: 1 (lower is better) Translates to: LEEQLKRKSVMLPIA*LVFSLSLLTHKCAL Trigger: CAGTGCACACTTGTGAGTCAGGAGACTTAAGGAGAAAACTAGTCATGCAATCGGGAGCATTACAGACTTCCTCTTAAGTTGCTCTTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032196.9 |
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| 3UTR-3UTR CCA 90 bp | GGGTGGCATGCAGCAGCACAGGGTGGGTGCCTGGAGACAAAGAACAGACGTGGACATGCATGTGTGAGATaGGATAAACAGTATGTCCGT | + |
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Preference number: 2 (lower is better) Translates to: GWHAAAQGGCLETKNRRGHACVR*DKQYVR Trigger: ACGGACATACTGTTTATCCCATCTCACACATGCATG...TCCACGTCTGTTCTTTGTCTCCAGGCACCCACCCTGTGCTGCTGCATGCCACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032196.9 |
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| 3UTR-3UTR GCA 90 bp | GGCCAGCTGAGGCAGCCACCTTCCAGCACAGTCTGTGGAGCCCTTTCCAGAGTGTTAGATGTCCTGAAATaGTGGAAAGCAATGGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: GQLRQPPSSTVCGALSRVLDVLK*WKAMER Trigger: TCTTTCCATTGCTTTCCAGCATTTCAGGACATCTAA...CACTCTGGAAAGGGCTCCACAGACTGTGCTGGAAGGTGGCTGCCTCAGCTGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032196.9 |
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| 3UTR-3UTR CCA 90 bp | AAGCACACTGTGGGCCTAACATCTACTGCCGGGGACCCCAACTTCAGGTTAGGAGACAAAGAACAGACGTaGATTCAGATGAAGTCGGAC | + |
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Preference number: 2 (lower is better) Translates to: KHTVGLTSTAGDPNFRLGDKEQT*IQMKSD Trigger: GTCCGACTTCATCTGAATCCACGTCTGTTCTTTGTC...TCCTAACCTGAAGTTGGGGTCCCCGGCAGTAGATGTTAGGCCCACAGTGTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032196.9 |
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| 3UTR-3UTR CCA 90 bp | TCTTCATGTGTTTGGCGAACATGCCTGTGTATGTACATGCCCATGCGTGTGAGTCACAGGGTGGGTGCCTaGAGACAAAGAACAGACGTG | + |
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Preference number: 2 (lower is better) Translates to: SSCVWRTCLCMYMPMRVSHRVGA*RQRTDV Trigger: CACGTCTGTTCTTTGTCTCCAGGCACCCACCCTGTG...ACTCACACGCATGGGCATGTACATACACAGGCATGTTCGCCAAACACATGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032196.9 |
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| 3UTR-3UTR GCA 90 bp | TGCCAAATCACACACTCAGTGACACAGAGTGACAGTATGTACGACAGCCTAACTTCGGTGACATTAGAGTaGCTGGCCAGCATTGGTGAA | + |
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Preference number: 2 (lower is better) Translates to: CQITHSVTQSDSMYDSLTSVTLE*LASIGE Trigger: TTCACCAATGCTGGCCAGGCACTCTAATGTCACCGA...AGTTAGGCTGTCGTACATACTGTCACTCTGTGTCACTGAGTGTGTGATTTGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032196.9 |
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| 3UTR-3UTR TCA 90 bp | TCTTCATGTGTTTGGCGAACATGCCTGTGTATGTACATGCCCATGCGTGTGAGTTTCTACCTTAACTCCTaGAGCAGTGTATGCTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: SSCVWRTCLCMYMPMRVSFYLNS*SSVCSE Trigger: TTCTGAGCATACACTGCTTCAGGAGTTAAGGTAGAA...ACTCACACGCATGGGCATGTACATACACAGGCATGTTCGCCAAACACATGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032196.9 |
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| 3UTR-3UTR CCA 90 bp | AATAAGAAGAGAACTTTCCAGCCCAGGTCCTACTCAGTAAGAATGAGAATGGAGCCTCCGTTCTCTGTGTaGCCGATCATCAAACAACCT | + |
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Preference number: 2 (lower is better) Translates to: NKKRTFQPRSYSVRMRMEPPFSV*PIIKQP Trigger: AGGTTGTTTGATGATCGGCCACACAGAGAACGGAGG...CTCCATTCTCATTCTTACTGAGTAGGACCTGGGCTGGAAAGTTCTCTTCTTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032196.9 |
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| 3UTR-3UTR CCA 90 bp | TCTTCATGTGTTTGGCGAACATGCCTGTGTATGTACATGCCCATGCGTGTGAGTGATGTCCTGAAATGCTaGAAAGCAATGGAAAGACAC | + |
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Preference number: 2 (lower is better) Translates to: SSCVWRTCLCMYMPMRVSDVLKC*KAMERH Trigger: GTGTCTTTCCATTGCTTTCCAGCATTTCAGGACATC...ACTCACACGCATGGGCATGTACATACACAGGCATGTTCGCCAAACACATGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032196.9 |
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| 3UTR-3UTR TCA 90 bp | TGCCAAATCACACACTCAGTGACACAGAGTGACAGTATGTACGACAGCCTAACTCCAGCTGATTTGCTATaGAGGATAGGAATACACATC | + |
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Preference number: 2 (lower is better) Translates to: CQITHSVTQSDSMYDSLTPADLL*RIGIHI Trigger: GATGTGTATTCCTATCCTTCATAGCAAATCAGCTGG...AGTTAGGCTGTCGTACATACTGTCACTCTGTGTCACTGAGTGTGTGATTTGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032196.9 |
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| 3UTR-3UTR CCA 90 bp | AGTTTAAATATCCCTTTATTCAAACCACCCATCCAATTCAGGAAGAGTGCAACCAGTGCCTGTGCAACATaGTGCAGTTATCTGTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: SLNIPLFKPPIQFRKSATSACAT*CSYLSR Trigger: TCTGGACAGATAACTGCACCATGTTGCACAGGCACT...GGTTGCACTCTTCCTGAATTGGATGGGTGGTTTGAATAAAGGGATATTTAAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032196.9 |
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| 3UTR-3UTR TCA 90 bp | AGTTTAAATATCCCTTTATTCAAACCACCCATCCAATTCAGGAAGAGTGCAACCTTTCACATGCATGTGTaGGATGGGATAAACAGTATG | + |
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Preference number: 2 (lower is better) Translates to: SLNIPLFKPPIQFRKSATFHMHV*DGINSM Trigger: CATACTGTTTATCCCATCTCACACATGCATGTGAAA...GGTTGCACTCTTCCTGAATTGGATGGGTGGTTTGAATAAAGGGATATTTAAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032196.9 |
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| 3UTR-3UTR CCA 90 bp | AGTTTAAATATCCCTTTATTCAAACCACCCATCCAATTCAGGAAGAGTGCAACCGTCCCTTTATGTACGTaGAGATCACTAAGCTACAAA | + |
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Preference number: 2 (lower is better) Translates to: SLNIPLFKPPIQFRKSATVPLCT*RSLSYK Trigger: TTTGTAGCTTAGTGATCTCCACGTACATAAAGGGAC...GGTTGCACTCTTCCTGAATTGGATGGGTGGTTTGAATAAAGGGATATTTAAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032196.9 |
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| 3UTR TCA 72 bp | GGCGAACATGCCTGTGTATGTACATGCCCATGCGTGTaGGTATGGAGGCGTACACACTCGGAGCTCCGGGGC | + |
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Preference number: 3 (lower is better) Translates to: GEHACVCTCPCV*VWRRTHSELRG Trigger: GCCCCGGAGCTCCGAGTGTGTACGCCTCCATACTCACACGCATGGGCATGTACATACACAGGCATGTTCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032196.9 |
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| 3UTR CCA 72 bp | CGGCCAGCTGAGGCAGCCACCTTCCAGCACAGTCTGTaGAGCCCTTTCCAGAGTGATTATCTTCCCACTCGA | + |
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Preference number: 3 (lower is better) Translates to: RPAEAATFQHSL*SPFQSDYLPTR Trigger: TCGAGTGGGAAGATAATCACTCTGGAAAGGGCTCCACAGACTGTGCTGGAAGGTGGCTGCCTCAGCTGGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032196.9 |
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| 3UTR TCA 72 bp | GTGTTCGGTGACATTAGAGTGCCTGGCCAGCATTGGTaGAGACTAGACTCACTCCTCAGGACCGGCCCACCA | + |
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Preference number: 3 (lower is better) Translates to: VFGDIRVPGQHW*RLDSLLRTGPP Trigger: TGGTGGGCCGGTCCTGAGGAGTGAGTCTAGTCTTCACCAATGCTGGCCAGGCACTCTAATGTCACCGAACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032196.9 |
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| 3UTR TCA 72 bp | TTATTTCTAGTTCATCCCATCAACACCTCGGCCAGCTaGGGCAGCCACCTTCCAGCACAGTCTGTGGAGCCC | + |
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Preference number: 3 (lower is better) Translates to: LFLVHPINTSAS*GSHLPAQSVEP Trigger: GGGCTCCACAGACTGTGCTGGAAGGTGGCTGCCTCAGCTGGCCGAGGTGTTGATGGGATGAACTAGAAATAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032196.9 |
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| 3UTR TCA 72 bp | CACCTTCCAGCACAGTCTGTGGAGCCCTTTCCAGAGTaGTTATCTTCCCACTCGAGTCCAAAGGTCTGCGTC | + |
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Preference number: 3 (lower is better) Translates to: HLPAQSVEPFPE*LSSHSSPKVCV Trigger: GACGCAGACCTTTGGACTCGAGTGGGAAGATAATCACTCTGGAAAGGGCTCCACAGACTGTGCTGGAAGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032196.9 |
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| 3UTR GCA 72 bp | ATTACAGACAAAGCACACTGTGGGCCTAACATCTACTaGCGGGGACCCCAACTTCAGGTTAGGAGGCAAGTG | + |
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Preference number: 3 (lower is better) Translates to: ITDKAHCGPNIY*RGPQLQVRRQV Trigger: CACTTGCCTCCTAACCTGAAGTTGGGGTCCCCGGCAGTAGATGTTAGGCCCACAGTGTGCTTTGTCTGTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032196.9 |
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| 3UTR CCA 72 bp | TGGAGGCGTACACACTCGGAGCTCCGGGGCTTATGTTaGGTATCTTCCGCAGTCATTTTCTACCTTAACTCC | + |
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Preference number: 3 (lower is better) Translates to: WRRTHSELRGLC*VSSAVIFYLNS Trigger: GGAGTTAAGGTAGAAAATGACTGCGGAAGATACCCAACATAAGCCCCGGAGCTCCGAGTGTGTACGCCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032196.9 |
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| 3UTR TCA 72 bp | ACCCATCCAATTCAGGAAGAGTGCAACCTGCCTCCGTaGATAAGAAGAGAACTTTCCAGCCCAGGTCCTACT | + |
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Preference number: 3 (lower is better) Translates to: THPIQEECNLPP*IRRELSSPGPT Trigger: AGTAGGACCTGGGCTGGAAAGTTCTCTTCTTATTCACGGAGGCAGGTTGCACTCTTCCTGAATTGGATGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032196.9 |
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| 3UTR GCA 72 bp | CGTTTAGGCTTCCACCCTCCAGGCCTTCTGAGAGGATaGAGTTACCAAATCAATGTCAGATGCAAAAGGAAG | + |
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Preference number: 3 (lower is better) Translates to: RLGFHPPGLLRG*SYQINVRCKRK Trigger: CTTCCTTTTGCATCTGACATTGATTTGGTAACTGCATCCTCTCAGAAGGCCTGGAGGGTGGAAGCCTAAACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032196.9 |
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| 3UTR CCA 72 bp | AGCACAGGGTGGGTGCCTGGAGACAAAGAACAGACGTaGATTCAGATGAAGTCGGACATTCTTAAAGGGTTT | + |
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Preference number: 3 (lower is better) Translates to: STGWVPGDKEQT*IQMKSDILKGF Trigger: AAACCCTTTAAGAATGTCCGACTTCATCTGAATCCACGTCTGTTCTTTGTCTCCAGGCACCCACCCTGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032196.9 |
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| 3UTR TCA 72 bp | ATCATAGTCAAAAAGGCAAATTTTAGAGATCTGTTCTaGGCCACACACCCATCCTCCCAGCACTCACGAGGC | + |
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Preference number: 3 (lower is better) Translates to: IIVKKANFRDLF*ATHPSSQHSRG Trigger: GCCTCGTGAGTGCTGGGAGGATGGGTGTGTGGCTCAGAACAGATCTCTAAAATTTGCCTTTTTGACTATGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032196.9 |
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| 3UTR GCA 72 bp | AGAATGGAGAGAACAAGTAGTGCCTGTGCAACATGGTaGAGTTATCTGTCCAGAATGTTCTTAAGGCCGTGG | + |
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Preference number: 3 (lower is better) Translates to: RMERTSSACATW*SYLSRMFLRPW Trigger: CCACGGCCTTAAGAACATTCTGGACAGATAACTGCACCATGTTGCACAGGCACTACTTGTTCTCTCCATTCT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032196.9 |
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| 3UTR TCA 72 bp | CCTTATTACCATCAATTTGACAATAGTAAATTCTTGTaGAAGGTATGCCAAATCACACACTCAGTGACACAG | + |
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Preference number: 3 (lower is better) Translates to: PYYHQFDNSKFL*KVCQITHSVTQ Trigger: CTGTGTCACTGAGTGTGTGATTTGGCATACCTTTCACAAGAATTTACTATTGTCAAATTGATGGTAATAAGG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032196.9 |
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| CDS-3UTR TCA 90 bp | GGGTGGCATGCAGCAGCACAGGGTGGGTGCCTGGAGACAAAGAACAGACGTGGAGCTTCTCCGGGATTTTaGGTGTTGAATAAGCCACTG | + |
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Preference number: 4 (lower is better) Translates to: GWHAAAQGGCLETKNRRGASPGF*VLNKPL Trigger: CAGTGGCTTATTCAACACTCAAAATCCCGGAGAAGC...TCCACGTCTGTTCTTTGTCTCCAGGCACCCACCCTGTGCTGCTGCATGCCACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032196.9 |
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| 3UTR CAA 72 bp | GGTCGGTCTCCTCACAGTGGCACGTTTTCAGAGTCCTaGGCCAGCAGGGTGTTACAGATTGGTATCTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: GRSPHSGTFSES*ASRVLQIGIFW Trigger: CCAGAAGATACCAATCTGTAACACCCTGCTGGCCAAGGACTCTGAAAACGTGCCACTGTGAGGAGACCGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032196.9 |
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| CDS-3UTR GCA 90 bp | GGCCAGCTGAGGCAGCCACCTTCCAGCACAGTCTGTGGAGCCCTTTCCAGAGTGTATCATGTAAACAATTaGATTGACTCCTCGGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: GQLRQPPSSTVCGALSRVYHVNN*IDSSAV Trigger: TACTGCCGAGGAGTCAATGCAATTGTTTACATGATA...CACTCTGGAAAGGGCTCCACAGACTGTGCTGGAAGGTGGCTGCCTCAGCTGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032196.9 |
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| CDS-3UTR TCA 90 bp | AACGACAGGAGTTCTAAGGTTAGAGCCAAGGGGACTGGAAGACGAAGAAGAGGTGCTTCTCCGGGATTTTaGGTGTTGAATAAGCCACTG | + |
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Preference number: 4 (lower is better) Translates to: NDRSSKVRAKGTGRRRRGASPGF*VLNKPL Trigger: CAGTGGCTTATTCAACACTCAAAATCCCGGAGAAGC...ACCTCTTCTTCGTCTTCCAGTCCCCTTGGCTCTAACCTTAGAACTCCTGTCGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032196.9 ENSMUST00000204483.2 |
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| CDS-3UTR TCA 90 bp | GCAAGTGCTTTATCCACTAAGCCATCTCCTCAGCCCCAAAACGGCATATCAGAGATATCTTCACTGAATTaGCCGGACGCGATGACATTG | + |
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Preference number: 4 (lower is better) Translates to: ASALSTKPSPQPQNGISEISSLN*PDAMTL Trigger: CAATGTCATCGCGTCCGGTCAATTCAGTGAAGATAT...CTCTGATATGCCGTTTTGGGGCTGAGGAGATGGCTTAGTGGATAAAGCACTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032196.9 |
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| CDS-3UTR GCA 90 bp | GGAACGACAGGAGTTCTAAGGTTAGAGCCAAGGGGACTGGAAGACGAAGAAGAGTATCATGTAAACAATTaGATTGACTCCTCGGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: GTTGVLRLEPRGLEDEEEYHVNN*IDSSAV Trigger: TACTGCCGAGGAGTCAATGCAATTGTTTACATGATA...CTCTTCTTCGTCTTCCAGTCCCCTTGGCTCTAACCTTAGAACTCCTGTCGTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032196.9 ENSMUST00000204483.2 |
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| CDS-3UTR GCA 90 bp | CAGAGGAACGACAGGAGTTCTAAGGTTAGAGCCAAGGGGACTGGAAGACGAAGATATCTTTTCTCGATCTaGAGCATCTATCATGTAAAC | + |
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Preference number: 4 (lower is better) Translates to: QRNDRSSKVRAKGTGRRRYLFSI*SIYHVN Trigger: GTTTACATGATAGATGCTGCAGATCGAGAAAAGATA...TCTTCGTCTTCCAGTCCCCTTGGCTCTAACCTTAGAACTCCTGTCGTTCCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032196.9 ENSMUST00000204483.2 |
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| CDS-3UTR GCA 90 bp | AACGACAGGAGTTCTAAGGTTAGAGCCAAGGGGACTGGAAGACGAAGAAGAGGTTATCTTTTCTCGATCTaGAGCATCTATCATGTAAAC | + |
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Preference number: 4 (lower is better) Translates to: NDRSSKVRAKGTGRRRRGYLFSI*SIYHVN Trigger: GTTTACATGATAGATGCTGCAGATCGAGAAAAGATA...ACCTCTTCTTCGTCTTCCAGTCCCCTTGGCTCTAACCTTAGAACTCCTGTCGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032196.9 ENSMUST00000204483.2 |
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| CDS-3UTR GCA 90 bp | CCGTTCTCTGTGTGGCCGATCATCAAACAACCTGTAGACATTGCGCATGATTACTTATCTAGAAGATTATaGAGTTCATTTCGAGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: PFSVWPIIKQPVDIAHDYLSRRL*SSFREA Trigger: AGCCTCTCGAAATGAACTGCATAATCTTCTAGATAA...GTAATCATGCGCAATGTCTACAGGTTGTTTGATGATCGGCCACACAGAGAACGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032196.9 |
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| CDS-3UTR CAA 90 bp | TTCCAGCCCAGGTCCTACTCAGTAAGAATGAGAATGGAGAGAACAAGTAGTGCCCATATCTTCACTGAATaGACCGGACGCGATGACATT | + |
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Preference number: 5 (lower is better) Translates to: FQPRSYSVRMRMERTSSAHIFTE*TGRDDI Trigger: AATGTCATCGCGTCCGGTCAATTCAGTGAAGATATG...GGCACTACTTGTTCTCTCCATTCTCATTCTTACTGAGTAGGACCTGGGCTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032196.9 |
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| CDS-3UTR CAA 90 bp | TCCAGCACAGTCTGTGGAGCCCTTTCCAGAGTGATTATCTTCCCACTCGAGTCCTTTGGAAGATCTCTCTaGTTTCCAAGTACTAGTACT | + |
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Preference number: 5 (lower is better) Translates to: SSTVCGALSRVIIFPLESFGRSL*FPSTST Trigger: AGTACTAGTACTTGGAAACAAGAGAGATCTTCCAAA...GGACTCGAGTGGGAAGATAATCACTCTGGAAAGGGCTCCACAGACTGTGCTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032196.9 |
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| CDS-3UTR CAA 90 bp | GGAACGACAGGAGTTCTAAGGTTAGAGCCAAGGGGACTGGAAGACGAAGAAGAGTTTGGAAGATCTCTCTaGTTTCCAAGTACTAGTACT | + |
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Preference number: 5 (lower is better) Translates to: GTTGVLRLEPRGLEDEEEFGRSL*FPSTST Trigger: AGTACTAGTACTTGGAAACAAGAGAGATCTTCCAAA...CTCTTCTTCGTCTTCCAGTCCCCTTGGCTCTAACCTTAGAACTCCTGTCGTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032196.9 ENSMUST00000204483.2 |
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