Pregenerated sensors for ARHGAP8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078954Ensembl transcript IDs: ENSMUST00000006029.11, ENSMUST00000168811.2, ENSMUST00000172307.9
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | AAAGATAGTAAGTTCATAAGACAAACAGGTACACAGATGCCTAGATaGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCAAGCT | + |
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Preference number: 2 (lower is better) Translates to: KDSKFIRQTGTQMPR*EGGISSLHLEVSQA Trigger: AGCTTGAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTGTACCTGTTTGTCTTATGAACTTACTATCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR GCA 90 bp | CACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCCTGGCGGTCATCCCCTaGCACCTGCAGGATGCCGTG | + |
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Preference number: 4 (lower is better) Translates to: HRCLDWKGASPVSILRCLLAVIP*HLQDAV Trigger: CACGGCATCCTGCAGGTGGCAGGGGATGACCGCCAG...GAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR GCA 90 bp | GGTACACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGAGGCTGACGCCAAACTaGTGGGTGGGCAGAGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: GTQMPRLEGGISSLHLEVRLTPN*WVGRGG Trigger: GCCGCCTCTGCCCACCCAGCAGTTTGGCGTCAGCCT...CACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTGTACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR GCA 90 bp | CACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCAGGCTGACGCCAAACTaGTGGGTGGGCAGAGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: HRCLDWKGASPVSILRCLRLTPN*WVGRGG Trigger: GCCGCCTCTGCCCACCCAGCAGTTTGGCGTCAGCCT...GAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR CCA 90 bp | GGTACACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGGTGGCGGTGTCTTGGTaGGCGGGGGCGGTTGACCTT | + |
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Preference number: 4 (lower is better) Translates to: GTQMPRLEGGISSLHLEVVAVSW*AGAVDL Trigger: AAGGTCAACCGCCCCCGCCCACCAAGACACCGCCAC...CACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTGTACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR GCA 90 bp | CACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCTCATCCCCTGCCACCTaGAGGATGCCGTGTCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: HRCLDWKGASPVSILRCLSSPAT*RMPCLA Trigger: GGCCAGACACGGCATCCTGCAGGTGGCAGGGGATGA...GAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR GCA 90 bp | ACACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCTGGCGGTCATCCCCTaGCACCTGCAGGATGCCGTG | + |
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Preference number: 4 (lower is better) Translates to: TQMPRLEGGISSLHLEVSLAVIP*HLQDAV Trigger: CACGGCATCCTGCAGGTGGCAGGGGATGACCGCCAG...AGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR GCA 90 bp | ATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCAAGCTAGGCTGACGCCAAACTaGTGGGTGGGCAGAGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: MPRLEGGISSLHLEVSQARLTPN*WVGRGG Trigger: GCCGCCTCTGCCCACCCAGCAGTTTGGCGTCAGCCT...AGCTTGAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR CCA 90 bp | ACACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTGTGGCGGTGTCTTGGTaGGCGGGGGCGGTTGACCTT | + |
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Preference number: 4 (lower is better) Translates to: TQMPRLEGGISSLHLEVSVAVSW*AGAVDL Trigger: AAGGTCAACCGCCCCCGCCCACCAAGACACCGCCAC...AGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR CCA 90 bp | ATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCAAGCTCTGACGCCAAACTGCTaGGTGGGCAGAGGCGGCCGA | + |
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Preference number: 4 (lower is better) Translates to: MPRLEGGISSLHLEVSQALTPNC*VGRGGR Trigger: TCGGCCGCCTCTGCCCACCCAGCAGTTTGGCGTCAG...AGCTTGAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR CCA 90 bp | AGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCAAGGGACAGTCTGGGCGCTaGCCGATCTCCGGAACAGGC | + |
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Preference number: 4 (lower is better) Translates to: RCLDWKGASPVSILRCLKGQSGR*PISGTG Trigger: GCCTGTTCCGGAGATCGGCCAGCGCCCAGACTGTCC...CTTGAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR CCA 90 bp | ATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCAAGCTGGACAGTCTGGGCGCTaGCCGATCTCCGGAACAGGC | + |
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Preference number: 4 (lower is better) Translates to: MPRLEGGISSLHLEVSQAGQSGR*PISGTG Trigger: GCCTGTTCCGGAGATCGGCCAGCGCCCAGACTGTCC...AGCTTGAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR GCA 90 bp | TGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCAAGCTATCATCCCCTGCCACCTaGAGGATGCCGTGTCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: CLDWKGASPVSILRCLKLSSPAT*RMPCLA Trigger: GGCCAGACACGGCATCCTGCAGGTGGCAGGGGATGA...TAGCTTGAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR CCA 90 bp | ACACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTGAGCTGGTGCAAGGGTaGCAGCCGGCAGCAGCTGAA | + |
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Preference number: 4 (lower is better) Translates to: TQMPRLEGGISSLHLEVSELVQG*QPAAAE Trigger: TTCAGCTGCTGCCGGCTGCCACCCTTGCACCAGCTC...AGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR CCA 90 bp | CAAACAGGTACACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTCTGACGCCAAACTGCTaGGTGGGCAGAGGCGGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: QTGTQMPRLEGGISSLHLLTPNC*VGRGGR Trigger: TCGGCCGCCTCTGCCCACCCAGCAGTTTGGCGTCAG...AAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTGTACCTGTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR GCA 90 bp | CACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCCTGCCACCTGCAGGATaGCGTGTCTGGCCACATCAT | + |
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Preference number: 4 (lower is better) Translates to: HRCLDWKGASPVSILRCLLPPAG*RVWPHH Trigger: ATGATGTGGCCAGACACGGCATCCTGCAGGTGGCAG...GAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR GCA 90 bp | AGACAAACAGGTACACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATTCATCCCCTGCCACCTaGAGGATGCCGTGTCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: RQTGTQMPRLEGGISSLHSSPAT*RMPCLA Trigger: GGCCAGACACGGCATCCTGCAGGTGGCAGGGGATGA...ATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTGTACCTGTTTGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR TCA 90 bp | CAGGTACACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGCTCTCCACACTGGTaGTCCCGAGAATCTGCTCGT | + |
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Preference number: 4 (lower is better) Translates to: QVHRCLDWKGASPVSILRCSPHW*SRESAR Trigger: ACGAGCAGATTCTCGGGATCACCAGTGTGGAGAGCA...CCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTGTACCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR TCA 90 bp | CACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCTGCTCTCCACACTGGTaGTCCCGAGAATCTGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: HRCLDWKGASPVSILRCLCSPHW*SRESAR Trigger: ACGAGCAGATTCTCGGGATCACCAGTGTGGAGAGCA...GAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR CCA 90 bp | AGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCAAGTACTCCAGCAGGCGCTaGTGGTTGAGCTGGTGCAAG | + |
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Preference number: 4 (lower is better) Translates to: RCLDWKGASPVSILRCLKYSSRR*WLSWCK Trigger: CTTGCACCAGCTCAACCACCAGCGCCTGCTGGAGTA...CTTGAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR CCA 90 bp | CAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCAATACTCCAGCAGGCGCTaGTGGTTGAGCTGGTGCAAG | + |
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Preference number: 4 (lower is better) Translates to: QMPRLEGGISSLHLEVSQYSSRR*WLSWCK Trigger: CTTGCACCAGCTCAACCACCAGCGCCTGCTGGAGTA...TTGAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR CCA 90 bp | CAGGTACACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGAAGGTCAGCAGTGGCTaGGGCAGCTCTCGGAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: QVHRCLDWKGASPVSILRKVSSG*GSSRRN Trigger: ATTTCTCCGAGAGCTGCCCCAGCCACTGCTGACCTT...CCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTGTACCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR CCA 90 bp | CAGGTACACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGAGCCACCCCCTGGGATaGCCAGATCAAGTTCAATCC | + |
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Preference number: 4 (lower is better) Translates to: QVHRCLDWKGASPVSILRSHPLG*PDQVQS Trigger: GGATTGAACTTGATCTGGCCATCCCAGGGGGTGGCT...CCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTGTACCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR CCA 90 bp | CACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCAGCCACCCCCTGGGATaGCCAGATCAAGTTCAATCC | + |
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Preference number: 4 (lower is better) Translates to: HRCLDWKGASPVSILRCLSHPLG*PDQVQS Trigger: GGATTGAACTTGATCTGGCCATCCCAGGGGGTGGCT...GAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR CCA 90 bp | ATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCAAGCTAGGGAAGCCACCCCCTaGGATGGCCAGATCAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: MPRLEGGISSLHLEVSQAREATP*DGQIKF Trigger: GAACTTGATCTGGCCATCCCAGGGGGTGGCTTCCCT...AGCTTGAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR TCA 90 bp | ATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCAAGCTTGCTCTCCACACTGGTaGTCCCGAGAATCTGCTCGT | + |
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Preference number: 4 (lower is better) Translates to: MPRLEGGISSLHLEVSQACSPHW*SRESAR Trigger: ACGAGCAGATTCTCGGGATCACCAGTGTGGAGAGCA...AGCTTGAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR GCA 90 bp | ACACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTAGAATGGGTGACTTGTaGTCAGTGTGGGGTCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: TQMPRLEGGISSLHLEVSRMGDL*SVWGPG Trigger: GCCTGGACCCCACACTGAGCACAAGTCACCCATTCT...AGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR GCA 90 bp | AGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCAAGAGAATGGGTGACTTGTaGTCAGTGTGGGGTCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: RCLDWKGASPVSILRCLKRMGDL*SVWGPG Trigger: GCCTGGACCCCACACTGAGCACAAGTCACCCATTCT...CTTGAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR GCA 90 bp | AGACAAACAGGTACACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTGCCACCTGCAGGATaGCGTGTCTGGCCACATCAT | + |
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Preference number: 4 (lower is better) Translates to: RQTGTQMPRLEGGISSLHLPPAG*RVWPHH Trigger: ATGATGTGGCCAGACACGGCATCCTGCAGGTGGCAG...ATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTGTACCTGTTTGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR CCA 90 bp | ATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCAAGCTAAGGTCAGCAGTGGCTaGGGCAGCTCTCGGAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: MPRLEGGISSLHLEVSQAKVSSG*GSSRRN Trigger: ATTTCTCCGAGAGCTGCCCCAGCCACTGCTGACCTT...AGCTTGAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR CCA 90 bp | ACACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTAAGGTCAGCAGTGGCTaGGGCAGCTCTCGGAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: TQMPRLEGGISSLHLEVSKVSSG*GSSRRN Trigger: ATTTCTCCGAGAGCTGCCCCAGCCACTGCTGACCTT...AGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR CCA 90 bp | ATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCAAGCTGGCATAGTTGTGTTCTaGGAGGCTCCGCAGGATCAG | + |
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Preference number: 4 (lower is better) Translates to: MPRLEGGISSLHLEVSQAGIVVF*EAPQDQ Trigger: CTGATCCTGCGGAGCCTCCCAGAACACAACTATGCC...AGCTTGAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR CCA 90 bp | AGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCAAGGGCATAGTTGTGTTCTaGGAGGCTCCGCAGGATCAG | + |
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Preference number: 4 (lower is better) Translates to: RCLDWKGASPVSILRCLKGIVVF*EAPQDQ Trigger: CTGATCCTGCGGAGCCTCCCAGAACACAACTATGCC...CTTGAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR CCA 90 bp | TGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCAAGCTAAGCCACCCCCTGGGATaGCCAGATCAAGTTCAATCC | + |
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Preference number: 4 (lower is better) Translates to: CLDWKGASPVSILRCLKLSHPLG*PDQVQS Trigger: GGATTGAACTTGATCTGGCCATCCCAGGGGGTGGCT...TAGCTTGAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR CCA 90 bp | AGACAAACAGGTACACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATAGGGAAGCCACCCCCTaGGATGGCCAGATCAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: RQTGTQMPRLEGGISSLHREATP*DGQIKF Trigger: GAACTTGATCTGGCCATCCCAGGGGGTGGCTTCCCT...ATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTGTACCTGTTTGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR CCA 90 bp | AGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCAAGTCCCCAGGGGCCTCCTaGCAACTGAAGACTTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: RCLDWKGASPVSILRCLKSPGAS*QLKTLS Trigger: TGACAAAGTCTTCAGTTGCCAGGAGGCCCCTGGGGA...CTTGAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR CCA 90 bp | ATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCAAGCTTCCCCAGGGGCCTCCTaGCAACTGAAGACTTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: MPRLEGGISSLHLEVSQASPGAS*QLKTLS Trigger: TGACAAAGTCTTCAGTTGCCAGGAGGCCCCTGGGGA...AGCTTGAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR CCA 90 bp | TGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCAAGCTATCCCCAGGGGCCTCCTaGCAACTGAAGACTTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: CLDWKGASPVSILRCLKLSPGAS*QLKTLS Trigger: TGACAAAGTCTTCAGTTGCCAGGAGGCCCCTGGGGA...TAGCTTGAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR GCA 90 bp | ATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCAAGCTGGAACAGGCCCTCAGTaGGCAGTCCTTTTTCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: MPRLEGGISSLHLEVSQAGTGPQ*AVLFLS Trigger: TGAGAGAAAAAGGACTGCGCACTGAGGGCCTGTTCC...AGCTTGAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR GCA 90 bp | AGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCAAGGGAACAGGCCCTCAGTaGGCAGTCCTTTTTCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: RCLDWKGASPVSILRCLKGTGPQ*AVLFLS Trigger: TGAGAGAAAAAGGACTGCGCACTGAGGGCCTGTTCC...CTTGAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR GCA 90 bp | ATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCAAGCTGAAGATGTTCCACAGTaGTTTGATGAGGCTGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: MPRLEGGISSLHLEVSQAEDVPQ*FDEAGG Trigger: CCCACCAGCCTCATCAAAGCACTGTGGAACATCTTC...AGCTTGAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR GCA 90 bp | AGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCAAGGAAGATGTTCCACAGTaGTTTGATGAGGCTGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RCLDWKGASPVSILRCLKEDVPQ*FDEAGG Trigger: CCCACCAGCCTCATCAAAGCACTGTGGAACATCTTC...CTTGAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS-3UTR GCA 90 bp | CAGGTACACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGCCTTTGTGCAGGTTTTaGAGTTTCTCGTCATACCGC | + |
|
Preference number: 4 (lower is better) Translates to: QVHRCLDWKGASPVSILRPLCRF*SFSSYR Trigger: GCGGTATGACGAGAAACTGCAAAACCTGCACAAAGG...CCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTGTACCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS-3UTR GCA 90 bp | AGACAAACAGGTACACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATGGAACAGGCCCTCAGTaGGCAGTCCTTTTTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RQTGTQMPRLEGGISSLHGTGPQ*AVLFLS Trigger: TGAGAGAAAAAGGACTGCGCACTGAGGGCCTGTTCC...ATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTGTACCTGTTTGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS-3UTR CCA 90 bp | CAGGTACACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGGGCCACATCATAGAATaGGTGACTTGTGCTCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QVHRCLDWKGASPVSILRGHIIE*VTCAQC Trigger: ACACTGAGCACAAGTCACCCATTCTATGATGTGGCC...CCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTGTACCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS-3UTR CCA 90 bp | GGTACACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCGTTCTCCACATGCTaGTCCAGTGTGTACTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GTQMPRLEGGISSLHLEVSFSTC*SSVYFR Trigger: TCTGAAGTACACACTGGACCAGCATGTGGAGAACGA...CACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTGTACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS-3UTR CCA 90 bp | CACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCTCGTTCTCCACATGCTaGTCCAGTGTGTACTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HRCLDWKGASPVSILRCLSFSTC*SSVYFR Trigger: TCTGAAGTACACACTGGACCAGCATGTGGAGAACGA...GAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS-3UTR TCA 90 bp | CACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCGCTGTTCATCTTGTTTaGAATGCTCTCCAGAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: HRCLDWKGASPVSILRCLAVHLV*NALQRH Trigger: GTGTCTCTGGAGAGCATTTCAAACAAGATGAACAGC...GAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS-3UTR GCA 90 bp | AGACAAACAGGTACACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATGAAGATGTTCCACAGTaGTTTGATGAGGCTGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RQTGTQMPRLEGGISSLHEDVPQ*FDEAGG Trigger: CCCACCAGCCTCATCAAAGCACTGTGGAACATCTTC...ATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTGTACCTGTTTGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS-3UTR GCA 90 bp | ACAGGTACACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGCCTTTGTGCAGGTTTTaGAGTTTCTCGTCATACCGC | + |
|
Preference number: 4 (lower is better) Translates to: TGTQMPRLEGGISSLHLEPLCRF*SFSSYR Trigger: GCGGTATGACGAGAAACTGCAAAACCTGCACAAAGG...CTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTGTACCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS-3UTR GCA 90 bp | CAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCAACCTTTGTGCAGGTTTTaGAGTTTCTCGTCATACCGC | + |
|
Preference number: 4 (lower is better) Translates to: QMPRLEGGISSLHLEVSQPLCRF*SFSSYR Trigger: GCGGTATGACGAGAAACTGCAAAACCTGCACAAAGG...TTGAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS-3UTR TCA 90 bp | GGTACACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGGGGATGAGTTCACCTTaGTTTTTGTCTCTGAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: GTQMPRLEGGISSLHLEVGMSSP*FLSLRY Trigger: ATACCTCAGAGACAAAAATCAAGGTGAACTCATCCC...CACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTGTACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS-3UTR TCA 90 bp | ATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCAAGCTGCTGTTCATCTTGTTTaGAATGCTCTCCAGAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: MPRLEGGISSLHLEVSQAAVHLV*NALQRH Trigger: GTGTCTCTGGAGAGCATTTCAAACAAGATGAACAGC...AGCTTGAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS-3UTR GCA 90 bp | CACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCGTGTACAACGTACAGTaGCTTCAGGTTCTTCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: HRCLDWKGASPVSILRCLVYNVQ*LQVLLV Trigger: TACAAGAAGAACCTGAAGGCACTGTACGTTGTACAC...GAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS-3UTR CCA 90 bp | CAAACAGGTACACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGGCCACATCATAGAATaGGTGACTTGTGCTCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QTGTQMPRLEGGISSLHLGHIIE*VTCAQC Trigger: ACACTGAGCACAAGTCACCCATTCTATGATGTGGCC...AAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTGTACCTGTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS-3UTR CCA 90 bp | AGACAAACAGGTACACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATTCGTTCTCCACATGCTaGTCCAGTGTGTACTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RQTGTQMPRLEGGISSLHSFSTC*SSVYFR Trigger: TCTGAAGTACACACTGGACCAGCATGTGGAGAACGA...ATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTGTACCTGTTTGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS-3UTR TCA 90 bp | ACACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTGGGATGAGTTCACCTTaGTTTTTGTCTCTGAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TQMPRLEGGISSLHLEVSGMSSP*FLSLRY Trigger: ATACCTCAGAGACAAAAATCAAGGTGAACTCATCCC...AGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS-3UTR GCA 90 bp | ACACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTGTGTACAACGTACAGTaGCTTCAGGTTCTTCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TQMPRLEGGISSLHLEVSVYNVQ*LQVLLV Trigger: TACAAGAAGAACCTGAAGGCACTGTACGTTGTACAC...AGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS-3UTR GCA 90 bp | ACAGGTACACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTACAACGTACAGTaGCTTCAGGTTCTTCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TGTQMPRLEGGISSLHLEVYNVQ*LQVLLV Trigger: TACAAGAAGAACCTGAAGGCACTGTACGTTGTACAC...CTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTGTACCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS-3UTR CCA 90 bp | CTGTGTCTTCTTAAAGATAGTAAGTTCATAAGACAAACAGGTACACAGATGCCTGAGCTGGTGCAAGGGTaGCAGCCGGCAGCAGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LCLLKDSKFIRQTGTQMPELVQG*QPAAAE Trigger: TTCAGCTGCTGCCGGCTGCCACCCTTGCACCAGCTC...AGGCATCTGTGTACCTGTTTGTCTTATGAACTTACTATCTTTAAGAAGACACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS-3UTR GCA 90 bp | CAGGTACACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTCATCTTGTTTGAAATaGTCTCCAGAGACACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QVHRCLDWKGASPVSILRSSCLK*SPETLH Trigger: ATGAAGTGTCTCTGGAGAGCATTTCAAACAAGATGA...CCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTGTACCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS-3UTR GCA 90 bp | ATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCAAGCTTCATCTTGTTTGAAATaGTCTCCAGAGACACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: MPRLEGGISSLHLEVSQASSCLK*SPETLH Trigger: ATGAAGTGTCTCTGGAGAGCATTTCAAACAAGATGA...AGCTTGAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS-3UTR CCA 90 bp | CTGTGTCTTCTTAAAGATAGTAAGTTCATAAGACAAACAGGTACACAGATGCCTTACTCCAGCAGGCGCTaGTGGTTGAGCTGGTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LCLLKDSKFIRQTGTQMPYSSRR*WLSWCK Trigger: CTTGCACCAGCTCAACCACCAGCGCCTGCTGGAGTA...AGGCATCTGTGTACCTGTTTGTCTTATGAACTTACTATCTTTAAGAAGACACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS-3UTR GCA 90 bp | CTGTGTCTTCTTAAAGATAGTAAGTTCATAAGACAAACAGGTACACAGATGCCTAGAATGGGTGACTTGTaGTCAGTGTGGGGTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LCLLKDSKFIRQTGTQMPRMGDL*SVWGPG Trigger: GCCTGGACCCCACACTGAGCACAAGTCACCCATTCT...AGGCATCTGTGTACCTGTTTGTCTTATGAACTTACTATCTTTAAGAAGACACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS-3UTR CCA 90 bp | CTGTGTCTTCTTAAAGATAGTAAGTTCATAAGACAAACAGGTACACAGATGCCTGGCATAGTTGTGTTCTaGGAGGCTCCGCAGGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: LCLLKDSKFIRQTGTQMPGIVVF*EAPQDQ Trigger: CTGATCCTGCGGAGCCTCCCAGAACACAACTATGCC...AGGCATCTGTGTACCTGTTTGTCTTATGAACTTACTATCTTTAAGAAGACACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS-3UTR CCA 90 bp | CTGTGTCTTCTTAAAGATAGTAAGTTCATAAGACAAACAGGTACACAGATGCCTGGCCACATCATAGAATaGGTGACTTGTGCTCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LCLLKDSKFIRQTGTQMPGHIIE*VTCAQC Trigger: ACACTGAGCACAAGTCACCCATTCTATGATGTGGCC...AGGCATCTGTGTACCTGTTTGTCTTATGAACTTACTATCTTTAAGAAGACACAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS TCA 90 bp | GGCAGAGGCGGCCGAGGTGGCGGTGTCTTGGTGGGCGGGGGCGGTTaGCCTTTGTGCAGGTTTTGCAGTTTCTCGTCATACCGCACTACT | + |
|
Preference number: 5 (lower is better) Translates to: GRGGRGGGVLVGGGG*PLCRFCSFSSYRTT Trigger: AGTAGTGCGGTATGACGAGAAACTGCAAAACCTGCACAAAGGTCAACCGCCCCCGCCCACCAAGACACCGCCACCTCGGCCGCCTCTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS CCA 90 bp | CTTCAGATACTCCAGCAGGCGCTGGTGGTTGAGCTGGTGCAAGGGTaGCAGCCGGCAGCAGCTGAAAGTGAAGATGCGTCTCCCCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LQILQQALVVELVQG*QPAAAESEDASPLA Trigger: CGCCAGGGGAGACGCATCTTCACTTTCAGCTGCTGCCGGCTGCCACCCTTGCACCAGCTCAACCACCAGCGCCTGCTGGAGTATCTGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS GCA 90 bp | GACGGACAGTCTGGGCGCTGGCCGATCTCCGGAACAGGCCCTCAGTaGGCAGTCCTTTTTCTCTCAGATATGTCACCGTCCAACGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: DGQSGRWPISGTGPQ*AVLFLSDMSPSNAA Trigger: TGCTGCGTTGGACGGTGACATATCTGAGAGAAAAAGGACTGCGCACTGAGGGCCTGTTCCGGAGATCGGCCAGCGCCCAGACTGTCCGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS CCA 90 bp | TCCCTTGATCATATAGCCGCTGCACCTGACGGACAGTCTGGGCGCTaGCCGATCTCCGGAACAGGCCCTCAGTGCGCAGTCCTTTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SLDHIAAAPDGQSGR*PISGTGPQCAVLFL Trigger: GAGAAAAAGGACTGCGCACTGAGGGCCTGTTCCGGAGATCGGCCAGCGCCCAGACTGTCCGTCAGGTGCAGCGGCTATATGATCAAGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS CCA 90 bp | ACATGCTGGTCCAGTGTGTACTTCAGATACTCCAGCAGGCGCTGGTaGTTGAGCTGGTGCAAGGGTGGCAGCCGGCAGCAGCTGAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: TCWSSVYFRYSSRRW*LSWCKGGSRQQLKV Trigger: CACTTTCAGCTGCTGCCGGCTGCCACCCTTGCACCAGCTCAACCACCAGCGCCTGCTGGAGTATCTGAAGTACACACTGGACCAGCATGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS CCA 90 bp | TCCACATGCTGGTCCAGTGTGTACTTCAGATACTCCAGCAGGCGCTaGTGGTTGAGCTGGTGCAAGGGTGGCAGCCGGCAGCAGCTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: STCWSSVYFRYSSRR*WLSWCKGGSRQQLK Trigger: TTTCAGCTGCTGCCGGCTGCCACCCTTGCACCAGCTCAACCACCAGCGCCTGCTGGAGTATCTGAAGTACACACTGGACCAGCATGTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS GCA 90 bp | AGTGTGTACTTCAGATACTCCAGCAGGCGCTGGTGGTTGAGCTGGTaGAAGGGTGGCAGCCGGCAGCAGCTGAAAGTGAAGATGCGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SVYFRYSSRRWWLSW*KGGSRQQLKVKMRL Trigger: GAGACGCATCTTCACTTTCAGCTGCTGCCGGCTGCCACCCTTGCACCAGCTCAACCACCAGCGCCTGCTGGAGTATCTGAAGTACACACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS CCA 90 bp | TCCAGTGTGTACTTCAGATACTCCAGCAGGCGCTGGTGGTTGAGCTaGTGCAAGGGTGGCAGCCGGCAGCAGCTGAAAGTGAAGATGCGT | + |
|
Preference number: 5 (lower is better) Translates to: SSVYFRYSSRRWWLS*CKGGSRQQLKVKMR Trigger: ACGCATCTTCACTTTCAGCTGCTGCCGGCTGCCACCCTTGCACCAGCTCAACCACCAGCGCCTGCTGGAGTATCTGAAGTACACACTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS CCA 90 bp | CAAGTTCAGAGGTACCAGGGCGCTCAGGGAAGCCACCCCCTGGGATaGCCAGATCAAGTTCAATCCAAACACGCACGCCAGGTTAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: QVQRYQGAQGSHPLG*PDQVQSKHARQVRA Trigger: AGCTCTAACCTGGCGTGCGTGTTTGGATTGAACTTGATCTGGCCATCCCAGGGGGTGGCTTCCCTGAGCGCCCTGGTACCTCTGAACTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS CCA 90 bp | GTGAACAAGTTCAGAGGTACCAGGGCGCTCAGGGAAGCCACCCCCTaGGATGGCCAGATCAAGTTCAATCCAAACACGCACGCCAGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: VNKFRGTRALREATP*DGQIKFNPNTHARL Trigger: TAACCTGGCGTGCGTGTTTGGATTGAACTTGATCTGGCCATCCCAGGGGGTGGCTTCCCTGAGCGCCCTGGTACCTCTGAACTTGTTCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS-3UTR CAA 90 bp | CAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCAACAGCCTAGGGATGGTTaGTTCTGGCTGCTGAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: QMPRLEGGISSLHLEVSQQPRDG*FWLLRP Trigger: TGGCCTCAGCAGCCAGAACAAACCATCCCTAGGCTG...TTGAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS-3UTR CAA 90 bp | TGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCAAGCTACAGCCTAGGGATGGTTaGTTCTGGCTGCTGAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: CLDWKGASPVSILRCLKLQPRDG*FWLLRP Trigger: TGGCCTCAGCAGCCAGAACAAACCATCCCTAGGCTG...TAGCTTGAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS-3UTR CAA 90 bp | GGTACACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGCATAGAATGGGTGACTaGTGCTCAGTGTGGGGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GTQMPRLEGGISSLHLEVHRMGD*CSVWGP Trigger: TGGACCCCACACTGAGCACAAGTCACCCATTCTATG...CACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTGTACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS-3UTR CAA 90 bp | CAGGTACACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGCATAGAATGGGTGACTaGTGCTCAGTGTGGGGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QVHRCLDWKGASPVSILRHRMGD*CSVWGP Trigger: TGGACCCCACACTGAGCACAAGTCACCCATTCTATG...CCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTGTACCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS-3UTR CAA 90 bp | CACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCATGTTCCACAGTGCTTaGATGAGGCTGGTGGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: HRCLDWKGASPVSILRCLMFHSA*MRLVGC Trigger: ACACCCCACCAGCCTCATCAAAGCACTGTGGAACAT...GAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS-3UTR CAA 90 bp | TGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCAAGCTACATAGAATGGGTGACTaGTGCTCAGTGTGGGGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: CLDWKGASPVSILRCLKLHRMGD*CSVWGP Trigger: TGGACCCCACACTGAGCACAAGTCACCCATTCTATG...TAGCTTGAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS-3UTR CAA 90 bp | ATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCAAGCTATGTTCCACAGTGCTTaGATGAGGCTGGTGGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: MPRLEGGISSLHLEVSQAMFHSA*MRLVGC Trigger: ACACCCCACCAGCCTCATCAAAGCACTGTGGAACAT...AGCTTGAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR CAA 90 bp | CAGGTACACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTTTGTCTCTGAGGTATaGCAGGCTGACGCCAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: QVHRCLDWKGASPVSILRFVSEV*QADAKL Trigger: CAGTTTGGCGTCAGCCTGCAATACCTCAGAGACAAA...CCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTGTACCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR CAA 90 bp | CAAACAGGTACACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTATGTTCCACAGTGCTTaGATGAGGCTGGTGGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: QTGTQMPRLEGGISSLHLMFHSA*MRLVGC Trigger: ACACCCCACCAGCCTCATCAAAGCACTGTGGAACAT...AAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTGTACCTGTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR CAA 90 bp | ACAGGTACACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGTTTGTCTCTGAGGTATaGCAGGCTGACGCCAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: TGTQMPRLEGGISSLHLEFVSEV*QADAKL Trigger: CAGTTTGGCGTCAGCCTGCAATACCTCAGAGACAAA...CTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTGTACCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR CAA 90 bp | CACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCGTCTTCATAAATTCTTaGGTAACAGGGCCAGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: HRCLDWKGASPVSILRCLVFINS*VTGPAC Trigger: GCAGGCTGGCCCTGTTACCAAAGAATTTATGAAGAC...GAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS GCA 90 bp | GTTCCACAGTGCTTTGATGAGGCTGGTGGGGTGTACAACGTACAGTaGCTTCAGGTTCTTCTTGTACTTCCGGTCAAACTCCTTGTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: VPQCFDEAGGVYNVQ*LQVLLVLPVKLLVG Trigger: ACCTACAAGGAGTTTGACCGGAAGTACAAGAAGAACCTGAAGGCACTGTACGTTGTACACCCCACCAGCCTCATCAAAGCACTGTGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR CAA 90 bp | CAGGTACACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGGGGGATGAGTTCACCTaGATTTTTGTCTCTGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: QVHRCLDWKGASPVSILRGDEFT*IFVSEV Trigger: TACCTCAGAGACAAAAATCAAGGTGAACTCATCCCC...CCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTGTACCTG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR CAA 90 bp | CAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCAAGTCTTCATAAATTCTTaGGTAACAGGGCCAGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QMPRLEGGISSLHLEVSQVFINS*VTGPAC Trigger: GCAGGCTGGCCCTGTTACCAAAGAATTTATGAAGAC...TTGAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR CAA 90 bp | ACAGGTACACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGGGGATGAGTTCACCTaGATTTTTGTCTCTGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: TGTQMPRLEGGISSLHLEGDEFT*IFVSEV Trigger: TACCTCAGAGACAAAAATCAAGGTGAACTCATCCCC...CTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTGTACCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS-3UTR CAA 90 bp | GGTACACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGAGCTGTTCATCTTGTTaGAAATGCTCTCCAGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: GTQMPRLEGGISSLHLEVSCSSC*KCSPET Trigger: TGTCTCTGGAGAGCATTTCAAACAAGATGAACAGCT...CACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTGTACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS-3UTR CAA 90 bp | CACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCAGCTGTTCATCTTGTTaGAAATGCTCTCCAGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: HRCLDWKGASPVSILRCLSCSSC*KCSPET Trigger: TGTCTCTGGAGAGCATTTCAAACAAGATGAACAGCT...GAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS TCA 90 bp | GTTCAATCCAAACACGCACGCCAGGTTAGAGCTGTTCATCTTGTTTaGAATGCTCTCCAGAGACACTTCATGCAGGAAGCCCATGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: VQSKHARQVRAVHLV*NALQRHFMQEAHEV Trigger: TACCTCATGGGCTTCCTGCATGAAGTGTCTCTGGAGAGCATTTCAAACAAGATGAACAGCTCTAACCTGGCGTGCGTGTTTGGATTGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS-3UTR CAA 90 bp | AGACAAACAGGTACACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATGGGGATGAGTTCACCTaGATTTTTGTCTCTGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: RQTGTQMPRLEGGISSLHGDEFT*IFVSEV Trigger: TACCTCAGAGACAAAAATCAAGGTGAACTCATCCCC...ATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTGTACCTGTTTGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS-3UTR CAA 90 bp | ATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCAAGCTAGCTGTTCATCTTGTTaGAAATGCTCTCCAGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: MPRLEGGISSLHLEVSQASCSSC*KCSPET Trigger: TGTCTCTGGAGAGCATTTCAAACAAGATGAACAGCT...AGCTTGAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS-3UTR CAA 90 bp | CACAGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCTTAGAGCTGTTCATCTaGTTTGAAATGCTCTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: HRCLDWKGASPVSILRCLLELFI*FEMLSR Trigger: TCTGGAGAGCATTTCAAACAAGATGAACAGCTCTAA...GAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS-3UTR CAA 90 bp | AGATGCCTAGATTGGAAGGGGGCATCTCCAGTCTCCATCTTGAGGTGTCTCAAGTTAGAGCTGTTCATCTaGTTTGAAATGCTCTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RCLDWKGASPVSILRCLKLELFI*FEMLSR Trigger: TCTGGAGAGCATTTCAAACAAGATGAACAGCTCTAA...CTTGAGACACCTCAAGATGGAGACTGGAGATGCCCCCTTCCAATCTAGGCATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS-3UTR CAA 90 bp | CTGTGTCTTCTTAAAGATAGTAAGTTCATAAGACAAACAGGTACACAGATGCCTTTAGAGCTGTTCATCTaGTTTGAAATGCTCTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LCLLKDSKFIRQTGTQMPLELFI*FEMLSR Trigger: TCTGGAGAGCATTTCAAACAAGATGAACAGCTCTAA...AGGCATCTGTGTACCTGTTTGTCTTATGAACTTACTATCTTTAAGAAGACACAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS CCA 72 bp | GGGTGGGCAGAGGCGGCCGAGGTGGCGGTGTCTTGGTaGGCGGGGGCGGTTGACCTTTGTGCAGGTTTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: GWAEAAEVAVSW*AGAVDLCAGFA Trigger: TGCAAAACCTGCACAAAGGTCAACCGCCCCCGCCCACCAAGACACCGCCACCTCGGCCGCCTCTGCCCACCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS CCA 72 bp | GCTGGGTGGGCAGAGGCGGCCGAGGTGGCGGTGTCTTaGTGGGCGGGGGCGGTTGACCTTTGTGCAGGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: AGWAEAAEVAVS*WAGAVDLCAGF Trigger: AAAACCTGCACAAAGGTCAACCGCCCCCGCCCACCAAGACACCGCCACCTCGGCCGCCTCTGCCCACCCAGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS CCA 72 bp | CATATAGCCGCTGCACCTGACGGACAGTCTGGGCGCTaGCCGATCTCCGGAACAGGCCCTCAGTGCGCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: HIAAAPDGQSGR*PISGTGPQCAV Trigger: GACTGCGCACTGAGGGCCTGTTCCGGAGATCGGCCAGCGCCCAGACTGTCCGTCAGGTGCAGCGGCTATATG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS CCA 72 bp | AGCCGGCAGCAGCTGAAAGTGAAGATGCGTCTCCCCTaGCGGTCATCCCCTGCCACCTGCAGGATGCCGTGT | + |
|
Preference number: 6 (lower is better) Translates to: SRQQLKVKMRLP*RSSPATCRMPC Trigger: ACACGGCATCCTGCAGGTGGCAGGGGATGACCGCCAGGGGAGACGCATCTTCACTTTCAGCTGCTGCCGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS CAA 90 bp | GGGCAGAGGCGGCCGAGGTGGCGGTGTCTTGGTGGGCGGGGGCGGTaGACCTTTGTGCAGGTTTTGCAGTTTCTCGTCATACCGCACTAC | + |
|
Preference number: 6 (lower is better) Translates to: GQRRPRWRCLGGRGR*TFVQVLQFLVIPHY Trigger: GTAGTGCGGTATGACGAGAAACTGCAAAACCTGCACAAAGGTCAACCGCCCCCGCCCACCAAGACACCGCCACCTCGGCCGCCTCTGCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS GCA 72 bp | GGGCCAGCCTGCTGTACTTCCACAGTATCCCGGGTGTaGTCCCCAGGGGCCTCCTGGCAACTGAAGACTTTG | + |
|
Preference number: 6 (lower is better) Translates to: GPACCTSTVSRV*SPGASWQLKTL Trigger: CAAAGTCTTCAGTTGCCAGGAGGCCCCTGGGGAGCACACCCGGGATACTGTGGAAGTACAGCAGGCTGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS CCA 72 bp | CTCCAGCAGGCGCTGGTGGTTGAGCTGGTGCAAGGGTaGCAGCCGGCAGCAGCTGAAAGTGAAGATGCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LQQALVVELVQG*QPAAAESEDAS Trigger: AGACGCATCTTCACTTTCAGCTGCTGCCGGCTGCCACCCTTGCACCAGCTCAACCACCAGCGCCTGCTGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS CCA 72 bp | TTGTCTCTGAGGTATTGCAGGCTGACGCCAAACTGCTaGGTGGGCAGAGGCGGCCGAGGTGGCGGTGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LSLRYCRLTPNC*VGRGGRGGGVL Trigger: CAAGACACCGCCACCTCGGCCGCCTCTGCCCACCCAGCAGTTTGGCGTCAGCCTGCAATACCTCAGAGACAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS TCA 72 bp | GGCCGAGGTGGCGGTGTCTTGGTGGGCGGGGGCGGTTaGCCTTTGTGCAGGTTTTGCAGTTTCTCGTCATAC | + |
|
Preference number: 6 (lower is better) Translates to: GRGGGVLVGGGG*PLCRFCSFSSY Trigger: GTATGACGAGAAACTGCAAAACCTGCACAAAGGTCAACCGCCCCCGCCCACCAAGACACCGCCACCTCGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS CCA 72 bp | AGGTACCAGGGCGCTCAGGGAAGCCACCCCCTGGGATaGCCAGATCAAGTTCAATCCAAACACGCACGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RYQGAQGSHPLG*PDQVQSKHARQ Trigger: CTGGCGTGCGTGTTTGGATTGAACTTGATCTGGCCATCCCAGGGGGTGGCTTCCCTGAGCGCCCTGGTACCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS CAA 72 bp | AGTGTGTACTTCAGATACTCCAGCAGGCGCTGGTGGTaGAGCTGGTGCAAGGGTGGCAGCCGGCAGCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SVYFRYSSRRWW*SWCKGGSRQQL Trigger: CAGCTGCTGCCGGCTGCCACCCTTGCACCAGCTCAACCACCAGCGCCTGCTGGAGTATCTGAAGTACACACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS CAA 72 bp | CGGCCGAGGTGGCGGTGTCTTGGTGGGCGGGGGCGGTaGACCTTTGTGCAGGTTTTGCAGTTTCTCGTCATA | + |
|
Preference number: 6 (lower is better) Translates to: RPRWRCLGGRGR*TFVQVLQFLVI Trigger: TATGACGAGAAACTGCAAAACCTGCACAAAGGTCAACCGCCCCCGCCCACCAAGACACCGCCACCTCGGCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS GCA 72 bp | GAAAGTGAAGATGCGTCTCCCCTGGCGGTCATCCCCTaGCACCTGCAGGATGCCGTGTCTGGCCACATCATA | + |
|
Preference number: 6 (lower is better) Translates to: ESEDASPLAVIP*HLQDAVSGHII Trigger: TATGATGTGGCCAGACACGGCATCCTGCAGGTGGCAGGGGATGACCGCCAGGGGAGACGCATCTTCACTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS GCA 72 bp | TTCAGATACTCCAGCAGGCGCTGGTGGTTGAGCTGGTaGAAGGGTGGCAGCCGGCAGCAGCTGAAAGTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: FRYSSRRWWLSW*KGGSRQQLKVK Trigger: CTTCACTTTCAGCTGCTGCCGGCTGCCACCCTTGCACCAGCTCAACCACCAGCGCCTGCTGGAGTATCTGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS GCA 72 bp | TCTGGGCGCTGGCCGATCTCCGGAACAGGCCCTCAGTaGGCAGTCCTTTTTCTCTCAGATATGTCACCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SGRWPISGTGPQ*AVLFLSDMSPS Trigger: GGACGGTGACATATCTGAGAGAAAAAGGACTGCGCACTGAGGGCCTGTTCCGGAGATCGGCCAGCGCCCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS CCA 72 bp | GGCGGTCATCCCCTGCCACCTGCAGGATGCCGTGTCTaGCCACATCATAGAATGGGTGACTTGTGCTCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: GGHPLPPAGCRV*PHHRMGDLCSV Trigger: CACTGAGCACAAGTCACCCATTCTATGATGTGGCCAGACACGGCATCCTGCAGGTGGCAGGGGATGACCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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| CDS CCA 72 bp | TACTTCAGATACTCCAGCAGGCGCTGGTGGTTGAGCTaGTGCAAGGGTGGCAGCCGGCAGCAGCTGAAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: YFRYSSRRWWLS*CKGGSRQQLKV Trigger: CACTTTCAGCTGCTGCCGGCTGCCACCCTTGCACCAGCTCAACCACCAGCGCCTGCTGGAGTATCTGAAGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS CAA 90 bp | TGCTGGTCCAGTGTGTACTTCAGATACTCCAGCAGGCGCTGGTGGTaGAGCTGGTGCAAGGGTGGCAGCCGGCAGCAGCTGAAAGTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: CWSSVYFRYSSRRWW*SWCKGGSRQQLKVK Trigger: CTTCACTTTCAGCTGCTGCCGGCTGCCACCCTTGCACCAGCTCAACCACCAGCGCCTGCTGGAGTATCTGAAGTACACACTGGACCAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS CCA 72 bp | TTCAGAGGTACCAGGGCGCTCAGGGAAGCCACCCCCTaGGATGGCCAGATCAAGTTCAATCCAAACACGCAC | + |
|
Preference number: 6 (lower is better) Translates to: FRGTRALREATP*DGQIKFNPNTH Trigger: GTGCGTGTTTGGATTGAACTTGATCTGGCCATCCCAGGGGGTGGCTTCCCTGAGCGCCCTGGTACCTCTGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS TCA 72 bp | TATCCCGGGTGTGCTCCCCAGGGGCCTCCTGGCAACTaGAGACTTTGTCATAGTACTCTATCAGCAGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: YPGCAPQGPPGN*RLCHSTLSAAL Trigger: CAGAGCTGCTGATAGAGTACTATGACAAAGTCTTCAGTTGCCAGGAGGCCCCTGGGGAGCACACCCGGGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS CAA 72 bp | GGTGAGGCCCGGGGAGTGCCCGTCTTCATAAATTCTTaGGTAACAGGGCCAGCCTGCTGTACTTCCACAGTA | + |
|
Preference number: 6 (lower is better) Translates to: GEARGVPVFINS*VTGPACCTSTV Trigger: TACTGTGGAAGTACAGCAGGCTGGCCCTGTTACCAAAGAATTTATGAAGACGGGCACTCCCCGGGCCTCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS TCA 72 bp | AAACACGCACGCCAGGTTAGAGCTGTTCATCTTGTTTaGAATGCTCTCCAGAGACACTTCATGCAGGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: KHARQVRAVHLV*NALQRHFMQEA Trigger: GGCTTCCTGCATGAAGTGTCTCTGGAGAGCATTTCAAACAAGATGAACAGCTCTAACCTGGCGTGCGTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
||
| CDS CAA 90 bp | ATCAAGTTCAATCCAAACACGCACGCCAGGTTAGAGCTGTTCATCTaGTTTGAAATGCTCTCCAGAGACACTTCATGCAGGAAGCCCATG | + |
|
Preference number: 6 (lower is better) Translates to: IKFNPNTHARLELFI*FEMLSRDTSCRKPM Trigger: CATGGGCTTCCTGCATGAAGTGTCTCTGGAGAGCATTTCAAACAAGATGAACAGCTCTAACCTGGCGTGCGTGTTTGGATTGAACTTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006029.11 ENSMUST00000168811.2 ENSMUST00000172307.9 |
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