Pregenerated sensors for ARFIP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030881Ensembl transcript IDs: ENSMUST00000033171.15, ENSMUST00000084782.10, ENSMUST00000131446.8, ENSMUST00000133519.8, ENSMUST00000137931.8, ENSMUST00000157028.2, ENSMUST00000209550.2, ENSMUST00000209870.2, ENSMUST00000210911.2
Found 224 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATGCCCCGGGCCACCTCGTCACCAGGGCCAGAGGGTGACGTGCTGTaGGATGGATGTCGGCCAGACCCTGTGGGGATGAGTCCGTCACCA | + |
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Preference number: 1 (lower is better) Translates to: MPRATSSPGPEGDVL*DGCRPDPVGMSPSP Trigger: TGGTGACGGACTCATCCCCACAGGGTCTGGCCGACATCCATCTCACAGCACGTCACCCTCTGGCCCTGGTGACGAGGTGGCCCGGGGCAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000157028.2 |
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| 3UTR TCA 90 bp | TTCTCCAGCGATGCCCCGGGCCACCTCGTCACCAGGGCCAGAGGGTaGCGTGCTGTGAGATGGATGTCGGCCAGACCCTGTGGGGATGAG | + |
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Preference number: 1 (lower is better) Translates to: FSSDAPGHLVTRARG*RAVRWMSARPCGDE Trigger: CTCATCCCCACAGGGTCTGGCCGACATCCATCTCACAGCACGTCACCCTCTGGCCCTGGTGACGAGGTGGCCCGGGGCATCGCTGGAGAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000157028.2 |
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| 3UTR CCA 90 bp | CCCCGCAGCTTCTCATATTTGTCCCGATGGGTCTGGAAAGTGGCCTaGGCACTCTCAAGTCGACCACGAGTCCCTGCATCCCGGGGCCCT | + |
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Preference number: 1 (lower is better) Translates to: PRSFSYLSRWVWKVA*ALSSRPRVPASRGP Trigger: AGGGCCCCGGGATGCAGGGACTCGTGGTCGACTTGAGAGTGCCCAGGCCACTTTCCAGACCCATCGGGACAAATATGAGAAGCTGCGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033171.15 ENSMUST00000137931.8 ENSMUST00000209870.2 |
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| 3UTR GCA 90 bp | CCCAGTGTCCTTCTTGATAGCCAAGTTGGGCTGGGAGCTGCTCACTaGTCCTCTAACCAGGAAGGCTTCTCGGCTCCTGGAGGCCGCAGC | + |
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Preference number: 1 (lower is better) Translates to: PSVLLDSQVGLGAAH*SSNQEGFSAPGGRS Trigger: GCTGCGGCCTCCAGGAGCCGAGAAGCCTTCCTGGTTAGAGGAGCAGTGAGCAGCTCCCAGCCCAACTTGGCTATCAAGAAGGACACTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033171.15 ENSMUST00000137931.8 ENSMUST00000209870.2 |
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| 3UTR CCA 90 bp | CATCTCCCCGCAGCTTCTCATATTTGTCCCGATGGGTCTGGAAAGTaGCCTGGGCACTCTCAAGTCGACCACGAGTCCCTGCATCCCGGG | + |
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Preference number: 1 (lower is better) Translates to: HLPAASHICPDGSGK*PGHSQVDHESLHPG Trigger: CCCGGGATGCAGGGACTCGTGGTCGACTTGAGAGTGCCCAGGCCACTTTCCAGACCCATCGGGACAAATATGAGAAGCTGCGGGGAGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033171.15 ENSMUST00000137931.8 ENSMUST00000209870.2 |
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| 3UTR GCA 90 bp | GGTGGGCTGTCAGTGCCCGGCCCAGCTGCAGGACACTTTCATACTTaGGCTTCGTCTCACGCAGCAACTCAATCTGCAGCTCTAGCTCCA | + |
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Preference number: 1 (lower is better) Translates to: GGLSVPGPAAGHFHT*ASSHAATQSAALAP Trigger: TGGAGCTAGAGCTGCAGATTGAGTTGCTGCGTGAGACGAAGCGCAAGTATGAAAGTGTCCTGCAGCTGGGCCGGGCACTGACAGCCCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033171.15 ENSMUST00000157028.2 |
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| 3UTR CCA 90 bp | ATGGCCACATCTCCCCGCAGCTTCTCATATTTGTCCCGATGGGTCTaGAAAGTGGCCTGGGCACTCTCAAGTCGACCACGAGTCCCTGCA | + |
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Preference number: 1 (lower is better) Translates to: MATSPRSFSYLSRWV*KVAWALSSRPRVPA Trigger: TGCAGGGACTCGTGGTCGACTTGAGAGTGCCCAGGCCACTTTCCAGACCCATCGGGACAAATATGAGAAGCTGCGGGGAGATGTGGCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033171.15 ENSMUST00000137931.8 ENSMUST00000209870.2 |
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| 3UTR CCA 90 bp | TCAAGTCAGAGTGGTGTGCACCCTGTGCTGTGGGAACCTGCTGACTaGGTTGGTCCCCTTTCTCCACCCTCTAGAGGGGACAGAATGCTG | + |
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Preference number: 1 (lower is better) Translates to: SSQSGVHPVLWEPAD*VGPLSPPSRGDRML Trigger: CAGCATTCTGTCCCCTCTAGAGGGTGGAGAAAGGGGACCAACCCAGTCAGCAGGTTCCCACAGCACAGGGTGCACACCACTCTGACTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131446.8 |
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| 3UTR CCA 90 bp | AGCTTGATGGCCACATCTCCCCGCAGCTTCTCATATTTGTCCCGATaGGTCTGGAAAGTGGCCTGGGCACTCTCAAGTCGACCACGAGTC | + |
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Preference number: 1 (lower is better) Translates to: SLMATSPRSFSYLSR*VWKVAWALSSRPRV Trigger: GACTCGTGGTCGACTTGAGAGTGCCCAGGCCACTTTCCAGACCCATCGGGACAAATATGAGAAGCTGCGGGGAGATGTGGCCATCAAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033171.15 ENSMUST00000137931.8 ENSMUST00000209870.2 |
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| 3UTR CCA 90 bp | AGAACCCAGTCTTCTGGGGTTCTAAGCACAGTTCAACTGGGTGGGTaGATGAGGGGAGGGCCCATTCAGATGCAGGGCCACAAATGCAGC | + |
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Preference number: 1 (lower is better) Translates to: RTQSSGVLSTVQLGG*MRGGPIQMQGHKCS Trigger: GCTGCATTTGTGGCCCTGCATCTGAATGGGCCCTCCCCTCATCCACCCACCCAGTTGAACTGTGCTTAGAACCCCAGAAGACTGGGTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033171.15 ENSMUST00000084782.10 ENSMUST00000131446.8 |
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| 3UTR TCA 90 bp | GCAACACTATTGGCCCAGAGGAGCCCAAGAAGAGCTGCCATTGGCTaGCAGAACCTTTTGAGGTCCTGTCTTTGGTCAGGGGCACATCCC | + |
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Preference number: 1 (lower is better) Translates to: ATLLAQRSPRRAAIG*QNLLRSCLWSGAHP Trigger: GGGATGTGCCCCTGACCAAAGACAGGACCTCAAAAGGTTCTGTCAGCCAATGGCAGCTCTTCTTGGGCTCCTCTGGGCCAATAGTGTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033171.15 ENSMUST00000084782.10 ENSMUST00000131446.8 ENSMUST00000137931.8 |
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| 3UTR TCA 90 bp | CCCACCCCTTTGGTCCCAGTCCCCTTCTCTGCAATGGACACACATTaGGGAGGGAACAAAGGGTACTGGAGGCAACACTATTGGCCCAGA | + |
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Preference number: 1 (lower is better) Translates to: PTPLVPVPFSAMDTH*GGNKGYWRQHYWPR Trigger: TCTGGGCCAATAGTGTTGCCTCCAGTACCCTTTGTTCCCTCCTCAATGTGTGTCCATTGCAGAGAAGGGGACTGGGACCAAAGGGGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033171.15 ENSMUST00000084782.10 ENSMUST00000131446.8 ENSMUST00000137931.8 |
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| 3UTR CCA 90 bp | GGAGGCAACACTATTGGCCCAGAGGAGCCCAAGAAGAGCTGCCATTaGCTGACAGAACCTTTTGAGGTCCTGTCTTTGGTCAGGGGCACA | + |
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Preference number: 1 (lower is better) Translates to: GGNTIGPEEPKKSCH*LTEPFEVLSLVRGT Trigger: TGTGCCCCTGACCAAAGACAGGACCTCAAAAGGTTCTGTCAGCCAATGGCAGCTCTTCTTGGGCTCCTCTGGGCCAATAGTGTTGCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033171.15 ENSMUST00000084782.10 ENSMUST00000131446.8 ENSMUST00000137931.8 |
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| 3UTR GCA 90 bp | AGGACACTTTCATACTTGCGCTTCGTCTCACGCAGCAACTCAATCTaGAGCTCTAGCTCCAGATCCACAGTCCGGGAGCCTCGGCCAAAT | + |
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Preference number: 1 (lower is better) Translates to: RTLSYLRFVSRSNSI*SSSSRSTVREPRPN Trigger: ATTTGGCCGAGGCTCCCGGACTGTGGATCTGGAGCTAGAGCTGCAGATTGAGTTGCTGCGTGAGACGAAGCGCAAGTATGAAAGTGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033171.15 ENSMUST00000157028.2 |
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| 3UTR GCA 90 bp | GGTACTGGAGGCAACACTATTGGCCCAGAGGAGCCCAAGAAGAGCTaGCATTGGCTGACAGAACCTTTTGAGGTCCTGTCTTTGGTCAGG | + |
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Preference number: 1 (lower is better) Translates to: GTGGNTIGPEEPKKS*HWLTEPFEVLSLVR Trigger: CCTGACCAAAGACAGGACCTCAAAAGGTTCTGTCAGCCAATGGCAGCTCTTCTTGGGCTCCTCTGGGCCAATAGTGTTGCCTCCAGTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033171.15 ENSMUST00000084782.10 ENSMUST00000131446.8 ENSMUST00000137931.8 |
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| 3UTR CCA 90 bp | ATCACTGACAAAGAGTCAAGTCAGAGTGGTGTGCACCCTGTGCTGTaGGAACCTGCTGACTGGGTTGGTCCCCTTTCTCCACCCTCTAGA | + |
|
Preference number: 1 (lower is better) Translates to: ITDKESSQSGVHPVL*EPADWVGPLSPPSR Trigger: TCTAGAGGGTGGAGAAAGGGGACCAACCCAGTCAGCAGGTTCCCACAGCACAGGGTGCACACCACTCTGACTTGACTCTTTGTCAGTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131446.8 |
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| 3UTR GCA 90 bp | TGGGGATTGCAGTTATCACTGACAAAGAGTCAAGTCAGAGTGGTGTaGACCCTGTGCTGTGGGAACCTGCTGACTGGGTTGGTCCCCTTT | + |
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Preference number: 1 (lower is better) Translates to: WGLQLSLTKSQVRVV*TLCCGNLLTGLVPF Trigger: AAAGGGGACCAACCCAGTCAGCAGGTTCCCACAGCACAGGGTGCACACCACTCTGACTTGACTCTTTGTCAGTGATAACTGCAATCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131446.8 |
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| 3UTR TCA 90 bp | GACCGCACTCAAGCCCTGTCTAAAGTGCTGCTGGGAGTTTTCTTGTaGTTTCTTATACAATTAAGGTTTGACTTCAACAAGAGCAGTGCA | + |
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Preference number: 1 (lower is better) Translates to: DRTQALSKVLLGVFL*FLIQLRFDFNKSSA Trigger: TGCACTGCTCTTGTTGAAGTCAAACCTTAATTGTATAAGAAATCACAAGAAAACTCCCAGCAGCACTTTAGACAGGGCTTGAGTGCGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131446.8 |
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| 3UTR CCA 90 bp | AGATCAAGTCTGCCTCTTGTCTCTCACCCACTTAATTTTTCATTCTaGACTGAATTCTTATTCAGACTTTATGAGCATTGGCCTTTCTTC | + |
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Preference number: 1 (lower is better) Translates to: RSSLPLVSHPLNFSF*TEFLFRLYEHWPFF Trigger: GAAGAAAGGCCAATGCTCATAAAGTCTGAATAAGAATTCAGTCCAGAATGAAAAATTAAGTGGGTGAGAGACAAGAGGCAGACTTGATCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131446.8 |
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| 3UTR-3UTR TCA 90 bp | CGTCACCAGGGCCAGAGGGTGACGTGCTGTGAGATGGATGTCGGCCAGACCCTGACCAGGGCCAGAGGGTaGCGTGCTGTGAGATGGATG | + |
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Preference number: 2 (lower is better) Translates to: RHQGQRVTCCEMDVGQTLTRARG*RAVRWM Trigger: CATCCATCTCACAGCACGTCACCCTCTGGCCCTGGT...CAGGGTCTGGCCGACATCCATCTCACAGCACGTCACCCTCTGGCCCTGGTGACG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157028.2 |
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| 3UTR-3UTR GCA 90 bp | CGATGTCAAACTTTTCTCCAGCGATGCCCCGGGCCACCTCGTCACCAGGGCCAGACTTTTCTCCAGCGATaGCCCGGGCCACCTCGTCAC | + |
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Preference number: 2 (lower is better) Translates to: RCQTFLQRCPGPPRHQGQTFLQR*PGPPRH Trigger: GTGACGAGGTGGCCCGGGGCATCGCTGGAGAAAAGT...CTGGCCCTGGTGACGAGGTGGCCCGGGGCATCGCTGGAGAAAAGTTTGACATCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033171.15 ENSMUST00000157028.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGCTTCTGGGCCTACGGGCCTACGGGCCTCTTCAGACCACAGCAGTGGGCAAAGCTCTGGGGACTTCTaGCTGAGGTCAGCAAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: AASGPTGLRASSDHSSGQSSGDF*LRSAKA Trigger: TGCCTTTGCTGACCTCAGCCAGAAGTCCCCAGAGCT...TTGCCCACTGCTGTGGTCTGAAGAGGCCCGTAGGCCCGTAGGCCCAGAAGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033171.15 |
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| 3UTR-3UTR CCA 90 bp | GTAAGTGGCAAAGGACATCCCATGTCCAATCTCCTCCACCCTGGGGCTGCCCCGTTGTCCCGATGGGTCTaGAAAGTGGCCTGGGCACTC | + |
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Preference number: 2 (lower is better) Translates to: VSGKGHPMSNLLHPGAAPLSRWV*KVAWAL Trigger: GAGTGCCCAGGCCACTTTCCAGACCCATCGGGACAA...CGGGGCAGCCCCAGGGTGGAGGAGATTGGACATGGGATGTCCTTTGCCACTTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033171.15 ENSMUST00000137931.8 |
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| 3UTR CAA 90 bp | AGGTGGGCTGTCAGTGCCCGGCCCAGCTGCAGGACACTTTCATACTaGCGCTTCGTCTCACGCAGCAACTCAATCTGCAGCTCTAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: RWAVSARPSCRTLSY*RFVSRSNSICSSSS Trigger: GGAGCTAGAGCTGCAGATTGAGTTGCTGCGTGAGACGAAGCGCAAGTATGAAAGTGTCCTGCAGCTGGGCCGGGCACTGACAGCCCACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033171.15 ENSMUST00000157028.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGCAAGTAAGTGGCAAAGGACATCCCATGTCCAATCTCCTCCACCCTGGGGCACCAGGGCCAGAGGGTaGCGTGCTGTGAGATGGATG | + |
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Preference number: 2 (lower is better) Translates to: PASKWQRTSHVQSPPPWGTRARG*RAVRWM Trigger: CATCCATCTCACAGCACGTCACCCTCTGGCCCTGGT...GCCCCAGGGTGGAGGAGATTGGACATGGGATGTCCTTTGCCACTTACTTGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033171.15 |
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| 3UTR-3UTR TCA 90 bp | AAGCACAGTTCAACTGGGTGGGTGGATGAGGGGAGGGCCCATTCAGATGCAGGGCTGGGGACTTCTGGCTaGGGTCAGCAAAGGCATCAC | + |
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Preference number: 2 (lower is better) Translates to: KHSSTGWVDEGRAHSDAGLGTSG*GQQRHH Trigger: GTGATGCCTTTGCTGACCTCAGCCAGAAGTCCCCAG...CCCTGCATCTGAATGGGCCCTCCCCTCATCCACCCACCCAGTTGAACTGTGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033171.15 |
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| 3UTR-3UTR TCA 90 bp | AGAGTGGTGTGCACCCTGTGCTGTGGGAACCTGCTGACTGGGTTGGTCCCCTTTGATAGGCCTGAGGAGTaGTGCCATTGGCCAGGGAGT | + |
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Preference number: 2 (lower is better) Translates to: RVVCTLCCGNLLTGLVPFDRPEE*CHWPGS Trigger: ACTCCCTGGCCAATGGCATCACTCCTCAGGCCTATC...AAAGGGGACCAACCCAGTCAGCAGGTTCCCACAGCACAGGGTGCACACCACTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131446.8 |
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| 3UTR-3UTR TCA 90 bp | GGCTGTCAGTGCCCGGCCCAGCTGCAGGACACTTTCATACTTGCGCTTCGTCTCATTGAGGTTGGGTCCTaGCACCATCACCTGCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: GCQCPAQLQDTFILALRLIEVGS*HHHLLE Trigger: CTCCAGCAGGTGATGGTGTCAGGACCCAACCTCAAT...GAGACGAAGCGCAAGTATGAAAGTGTCCTGCAGCTGGGCCGGGCACTGACAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157028.2 |
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| 3UTR-3UTR GCA 90 bp | CATACTTGCGCTTCGTCTCACGCAGCAACTCAATCTGCAGCTCTAGCTCCAGATGAGGTGGGCTGTCAGTaGCCGGCCCAGCTGCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: HTCASSHAATQSAALAPDEVGCQ*PAQLQD Trigger: GTCCTGCAGCTGGGCCGGGCACTGACAGCCCACCTC...ATCTGGAGCTAGAGCTGCAGATTGAGTTGCTGCGTGAGACGAAGCGCAAGTATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033171.15 ENSMUST00000157028.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTGGGCCTACGGGCCTACGGGCCTCTTCAGACCACAGCAGTGGGCAAAACTGTTCCTCCTGAAGCTCTaGGGACTTCTGGCTGAGGTC | + |
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Preference number: 2 (lower is better) Translates to: FWAYGPTGLFRPQQWAKLFLLKL*GLLAEV Trigger: GACCTCAGCCAGAAGTCCCCAGAGCTTCAGGAGGAA...CAGTTTTGCCCACTGCTGTGGTCTGAAGAGGCCCGTAGGCCCGTAGGCCCAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033171.15 |
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| 3UTR-3UTR CCA 90 bp | CTGGGGCTGCCCCGCCCAGTGTCCTTCTTGATAGCCAAGTTGGGCTGGGAGCTGTCATATTTGTCCCGATaGGTCTGGAAAGTGGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: LGLPRPVSFLIAKLGWELSYLSR*VWKVAW Trigger: CCAGGCCACTTTCCAGACCCATCGGGACAAATATGA...CAGCTCCCAGCCCAACTTGGCTATCAAGAAGGACACTGGGCGGGGCAGCCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033171.15 ENSMUST00000137931.8 ENSMUST00000209870.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGCTGCAGGACACTTTCATACTTGCGCTTCGTCTCACGCAGCAACTCAATCTCAGACCCTGTGGGGATaGGTCCGTCACCAGAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: PAAGHFHTCASSHAATQSQTLWG*VRHQSP Trigger: GGGGCTCTGGTGACGGACTCATCCCCACAGGGTCTG...AGATTGAGTTGCTGCGTGAGACGAAGCGCAAGTATGAAAGTGTCCTGCAGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157028.2 |
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| 3UTR-3UTR GCA 90 bp | GAGCTGGGGATAGGCCTGAGGAGTGATGCCATTGGCCAGGGAGTGTTTTGTCATACTTTTCTCCAGCGATaGCCCGGGCCACCTCGTCAC | + |
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Preference number: 2 (lower is better) Translates to: ELGIGLRSDAIGQGVFCHTFLQR*PGPPRH Trigger: GTGACGAGGTGGCCCGGGGCATCGCTGGAGAAAAGT...ATGACAAAACACTCCCTGGCCAATGGCATCACTCCTCAGGCCTATCCCCAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033171.15 |
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| 3UTR-3UTR GCA 90 bp | GCAGCTCTAGCTCCAGATCCACAGTCCGGGAGCCTCGGCCAAATCTCTCTGATAAGTGCCCGGCCCAGCTaGAGGACACTTTCATACTTG | + |
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Preference number: 2 (lower is better) Translates to: AALAPDPQSGSLGQISLISARPS*RTLSYL Trigger: CAAGTATGAAAGTGTCCTGCAGCTGGGCCGGGCACT...TATCAGAGAGATTTGGCCGAGGCTCCCGGACTGTGGATCTGGAGCTAGAGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033171.15 ENSMUST00000157028.2 |
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| 3UTR-3UTR GCA 90 bp | GCTGTCAGTGCCCGGCCCAGCTGCAGGACACTTTCATACTTGCGCTTCGTCTCACCTGACACCATCACCTaGTGGAGGTCCTATAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: AVSARPSCRTLSYLRFVSPDTIT*WRSYRS Trigger: TGACCTATAGGACCTCCAGCAGGTGATGGTGTCAGG...TGAGACGAAGCGCAAGTATGAAAGTGTCCTGCAGCTGGGCCGGGCACTGACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157028.2 |
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| 3UTR-3UTR TCA 90 bp | GAACTGCTGAAGAGTCTGCTCCAGCTGTTTCTGGTTCCCAGCGAAGTAGGCAGACCAGGAACTTCAGCTTaGTGGCCACATCTCCCCGCA | + |
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Preference number: 2 (lower is better) Translates to: ELLKSLLQLFLVPSEVGRPGTSA*WPHLPA Trigger: TGCGGGGAGATGTGGCCATCAAGCTGAAGTTCCTGG...TCTGCCTACTTCGCTGGGAACCAGAAACAGCTGGAGCAGACTCTTCAGCAGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033171.15 ENSMUST00000137931.8 ENSMUST00000209870.2 |
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| 3UTR CAA 90 bp | AGGAACTTCAGCTTGATGGCCACATCTCCCCGCAGCTTCTCATATTaGTCCCGATGGGTCTGGAAAGTGGCCTGGGCACTCTCAAGTCGA | + |
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Preference number: 2 (lower is better) Translates to: RNFSLMATSPRSFSY*SRWVWKVAWALSSR Trigger: TCGACTTGAGAGTGCCCAGGCCACTTTCCAGACCCATCGGGACAAATATGAGAAGCTGCGGGGAGATGTGGCCATCAAGCTGAAGTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033171.15 ENSMUST00000137931.8 ENSMUST00000209870.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAGGGAACAAAGGGTACTGGAGGCAACACTATTGGCCCAGAGGAGCCCAAGAGAAAAGATCTGGGAATaGAGCCCAGTGGCCAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: RREQRVLEATLLAQRSPREKIWE*SPVARK Trigger: CTTCCTGGCCACTGGGCTTCATTCCCAGATCTTTTC...TCTTGGGCTCCTCTGGGCCAATAGTGTTGCCTCCAGTACCCTTTGTTCCCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033171.15 ENSMUST00000084782.10 ENSMUST00000131446.8 ENSMUST00000137931.8 |
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| 3UTR-3UTR GCA 90 bp | AACAAAGGGTACTGGAGGCAACACTATTGGCCCAGAGGAGCCCAAGAAGAGCTGGCATCACCTAGTGCATaGTGGGTCTGCAACAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: NKGYWRQHYWPRGAQEELASPSA*WVCNRL Trigger: CAGCCTGTTGCAGACCCAGCATGCACTAGGTGATGC...CAGCTCTTCTTGGGCTCCTCTGGGCCAATAGTGTTGCCTCCAGTACCCTTTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033171.15 |
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| 3UTR-3UTR GCA 90 bp | AGTGCTAGAACCCAGTCTTCTGGGGTTCTAAGCACAGTTCAACTGGGTGGGTGGGAGGGCCCATTCAGATaGAGGGCCACAAATGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: SARTQSSGVLSTVQLGGWEGPFR*RATNAA Trigger: AGCTGCATTTGTGGCCCTGCATCTGAATGGGCCCTC...CCACCCACCCAGTTGAACTGTGCTTAGAACCCCAGAAGACTGGGTTCTAGCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033171.15 ENSMUST00000084782.10 ENSMUST00000131446.8 |
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| 3UTR-3UTR TCA 90 bp | AGTGCTAGAACCCAGTCTTCTGGGGTTCTAAGCACAGTTCAACTGGGTGGGTGGGCAATGGACACACATTaGGGAGGGAACAAAGGGTAC | + |
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Preference number: 2 (lower is better) Translates to: SARTQSSGVLSTVQLGGWAMDTH*GGNKGY Trigger: GTACCCTTTGTTCCCTCCTCAATGTGTGTCCATTGC...CCACCCACCCAGTTGAACTGTGCTTAGAACCCCAGAAGACTGGGTTCTAGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033171.15 ENSMUST00000084782.10 ENSMUST00000131446.8 |
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| 3UTR-3UTR TCA 90 bp | CACAGTTCAACTGGGTGGGTGGATGAGGGGAGGGCCCATTCAGATGCAGGGCCACTTATTCAGACTTTATaGGCATTGGCCTTTCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: HSSTGWVDEGRAHSDAGPLIQTL*ALAFLP Trigger: AGGAAGAAAGGCCAATGCTCATAAAGTCTGAATAAG...TGGCCCTGCATCTGAATGGGCCCTCCCCTCATCCACCCACCCAGTTGAACTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131446.8 |
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| 3UTR-3UTR CCA 90 bp | AGCTGCAGGACACTTTCATACTTGCGCTTCGTCTCACGCAGCAACTCAATCTGCGACACCATCACCTGCTaGAGGTCCTATAGGTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: SCRTLSYLRFVSRSNSICDTITC*RSYRSE Trigger: CTCTGACCTATAGGACCTCCAGCAGGTGATGGTGTC...GCAGATTGAGTTGCTGCGTGAGACGAAGCGCAAGTATGAAAGTGTCCTGCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157028.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCACTGCATCTTGTATCCTAGCATTTCTCATTGTATTGTAGTTGCCTGGTTACAATCTCCTCCACCCTaGGGCTGCCCCGCCCAGTGT | + |
|
Preference number: 2 (lower is better) Translates to: SHCILYPSISHCIVVAWLQSPPP*GCPAQC Trigger: ACACTGGGCGGGGCAGCCCCAGGGTGGAGGAGATTG...TAACCAGGCAACTACAATACAATGAGAAATGCTAGGATACAAGATGCAGTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| 3UTR-3UTR TCA 90 bp | AGAGTGGTGTGCACCCTGTGCTGTGGGAACCTGCTGACTGGGTTGGTCCCCTTTTATACAATTAAGGTTTaGCTTCAACAAGAGCAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: RVVCTLCCGNLLTGLVPFYTIKV*LQQEQC Trigger: GCACTGCTCTTGTTGAAGTCAAACCTTAATTGTATA...AAAGGGGACCAACCCAGTCAGCAGGTTCCCACAGCACAGGGTGCACACCACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131446.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGGTGGAGCCATGTTTGGGCTCTGCTTTCAGGTTCTGTCTCCAACCATTTGAAGCAGGTTGCAGCAGGTaGGGTGAGAATGCCTTTATC | + |
|
Preference number: 2 (lower is better) Translates to: MVEPCLGSAFRFCLQPFEAGCSR*GENAFI Trigger: GATAAAGGCATTCTCACCGCACCTGCTGCAACCTGC...TTCAAATGGTTGGAGACAGAACCTGAAAGCAGAGCCCAAACATGGCTCCACCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131446.8 |
||
| 3UTR CAA 90 bp | TGCTTGTGCATCACCTTGATCTTGTTTTCTTCCAGGAACTTCAGCTaGATGGCCACATCTCCCCGCAGCTTCTCATATTTGTCCCGATGG | + |
|
Preference number: 2 (lower is better) Translates to: CLCITLILFSSRNFS*MATSPRSFSYLSRW Trigger: CCATCGGGACAAATATGAGAAGCTGCGGGGAGATGTGGCCATCAAGCTGAAGTTCCTGGAAGAAAACAAGATCAAGGTGATGCACAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033171.15 ENSMUST00000137931.8 ENSMUST00000209870.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGAGGGAACAAAGGGTACTGGAGGCAACACTATTGGCCCAGAGGAGCCCAAGATTTTGTCATAGCCTTTaGCTGTGGAGTGAAAGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: RREQRVLEATLLAQRSPRFCHSL*LWSERK Trigger: TTTCCTTTCACTCCACAGCCAAAGGCTATGACAAAA...TCTTGGGCTCCTCTGGGCCAATAGTGTTGCCTCCAGTACCCTTTGTTCCCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033171.15 ENSMUST00000084782.10 ENSMUST00000131446.8 ENSMUST00000137931.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCCACTGCATCTTGTATCCTAGCATTTCTCATTGTATTGTAGTTGCCTGGTTACGGCCCAACCCCCTCTaGACCCTATGCTCTTCAGAC | + |
|
Preference number: 2 (lower is better) Translates to: SHCILYPSISHCIVVAWLRPNPL*TLCSSD Trigger: GTCTGAAGAGCATAGGGTCCAGAGGGGGTTGGGCCG...TAACCAGGCAACTACAATACAATGAGAAATGCTAGGATACAAGATGCAGTGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTTATGAAAGGTTTATTCCTAGTGCTAGAACCCAGTCTTCTGGGGTTCTAAGCATGCAGGGCCACAAATaGAGCTCCCCATTATCCCCA | + |
|
Preference number: 2 (lower is better) Translates to: FYERFIPSARTQSSGVLSMQGHK*SSPLSP Trigger: TGGGGATAATGGGGAGCTGCATTTGTGGCCCTGCAT...GCTTAGAACCCCAGAAGACTGGGTTCTAGCACTAGGAATAAACCTTTCATAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000033171.15 ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| 3UTR-3UTR GCA 90 bp | AGACCTCTAAGAGGTTTCTTAGTTCCATTTCTCCAAAGATCAAGTCTGCCTCTTCAGGGCCTAACGCAGTaGCTGGCAAATAAAAGCACT | + |
|
Preference number: 2 (lower is better) Translates to: RPLRGFLVPFLQRSSLPLQGLTQ*LANKST Trigger: AGTGCTTTTATTTGCCAGGCACTGCGTTAGGCCCTG...AAGAGGCAGACTTGATCTTTGGAGAAATGGAACTAAGAAACCTCTTAGAGGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131446.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTTATGAAAGGTTTATTCCTAGTGCTAGAACCCAGTCTTCTGGGGTTCTAAGCCCTTTGGCTGTGGAGTaGAAGGAAAAGATCTGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: FYERFIPSARTQSSGVLSPLAVE*KEKIWE Trigger: TTCCCAGATCTTTTCCTTTCACTCCACAGCCAAAGG...GCTTAGAACCCCAGAAGACTGGGTTCTAGCACTAGGAATAAACCTTTCATAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033171.15 ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCCACTGCATCTTGTATCCTAGCATTTCTCATTGTATTGTAGTTGCCTGGTTAAAGCCAGCAAGTAAGTaGCAAAGGACATCCCATGTC | + |
|
Preference number: 2 (lower is better) Translates to: SHCILYPSISHCIVVAWLKPASK*QRTSHV Trigger: GACATGGGATGTCCTTTGCCACTTACTTGCTGGCTT...TAACCAGGCAACTACAATACAATGAGAAATGCTAGGATACAAGATGCAGTGGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTTATGAAAGGTTTATTCCTAGTGCTAGAACCCAGTCTTCTGGGGTTCTAAGCATCTGGTGCTCCCACTaGATCTTGTATCCTAGCATT | + |
|
Preference number: 2 (lower is better) Translates to: FYERFIPSARTQSSGVLSIWCSH*ILYPSI Trigger: AATGCTAGGATACAAGATGCAGTGGGAGCACCAGAT...GCTTAGAACCCCAGAAGACTGGGTTCTAGCACTAGGAATAAACCTTTCATAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| 3UTR GCA 72 bp | CCCGGGCCACCTCGTCACCAGGGCCAGAGGGTGACGTaGTGTGAGATGGATGTCGGCCAGACCCTGTGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: PGPPRHQGQRVT*CEMDVGQTLWG Trigger: TCCCCACAGGGTCTGGCCGACATCCATCTCACAGCACGTCACCCTCTGGCCCTGGTGACGAGGTGGCCCGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157028.2 |
||
| 3UTR TCA 72 bp | GATGCCCCGGGCCACCTCGTCACCAGGGCCAGAGGGTaGCGTGCTGTGAGATGGATGTCGGCCAGACCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: DAPGHLVTRARG*RAVRWMSARPC Trigger: ACAGGGTCTGGCCGACATCCATCTCACAGCACGTCACCCTCTGGCCCTGGTGACGAGGTGGCCCGGGGCATC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157028.2 |
||
| 3UTR TCA 72 bp | GCCACCTCGTCACCAGGGCCAGAGGGTGACGTGCTGTaGGATGGATGTCGGCCAGACCCTGTGGGGATGAGT | + |
|
Preference number: 3 (lower is better) Translates to: ATSSPGPEGDVL*DGCRPDPVGMS Trigger: ACTCATCCCCACAGGGTCTGGCCGACATCCATCTCACAGCACGTCACCCTCTGGCCCTGGTGACGAGGTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157028.2 |
||
| 3UTR GCA 72 bp | CTGGGTCTGCAACAGGCTGTAGAGGTGGGCTGTCAGTaGCCGGCCCAGCTGCAGGACACTTTCATACTTGCG | + |
|
Preference number: 3 (lower is better) Translates to: LGLQQAVEVGCQ*PAQLQDTFILA Trigger: CGCAAGTATGAAAGTGTCCTGCAGCTGGGCCGGGCACTGACAGCCCACCTCTACAGCCTGTTGCAGACCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033171.15 ENSMUST00000157028.2 |
||
| 3UTR CCA 72 bp | AGTGGTGTGCACCCTGTGCTGTGGGAACCTGCTGACTaGGTTGGTCCCCTTTCTCCACCCTCTAGAGGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: SGVHPVLWEPAD*VGPLSPPSRGD Trigger: GTCCCCTCTAGAGGGTGGAGAAAGGGGACCAACCCAGTCAGCAGGTTCCCACAGCACAGGGTGCACACCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131446.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGGCTGCCCCGCCCAGTGTCCTTCTTGATAGCCAAGTTGGGCTGGGAGCTGCTGTGTCTTCCATGGTCTaGGTGACCAGTGTGTTGATG | + |
|
Preference number: 3 (lower is better) Translates to: GAAPPSVLLDSQVGLGAAVSSMV*VTSVLM Trigger: CATCAACACACTGGTCACCAAGACCATGGAAGACAC...AGCAGCTCCCAGCCCAACTTGGCTATCAAGAAGGACACTGGGCGGGGCAGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033171.15 ENSMUST00000137931.8 ENSMUST00000209870.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGCCACCTCGTCACCAGGGCCAGAGGGTGACGTGCTGTGAGATGGATGTCGGCGTGCACTTATATGTGTaGATGCCCCATTTCTTGACG | + |
|
Preference number: 3 (lower is better) Translates to: GPPRHQGQRVTCCEMDVGVHLYV*MPHFLT Trigger: CGTCAAGAAATGGGGCATCAACACATATAAGTGCAC...GCCGACATCCATCTCACAGCACGTCACCCTCTGGCCCTGGTGACGAGGTGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033171.15 ENSMUST00000157028.2 |
||
| 3UTR GCA 72 bp | TCAGTGCCCGGCCCAGCTGCAGGACACTTTCATACTTaGGCTTCGTCTCACGCAGCAACTCAATCTGCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: SVPGPAAGHFHT*ASSHAATQSAA Trigger: AGCTGCAGATTGAGTTGCTGCGTGAGACGAAGCGCAAGTATGAAAGTGTCCTGCAGCTGGGCCGGGCACTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033171.15 ENSMUST00000157028.2 |
||
| 3UTR GCA 72 bp | CTTCTTGATAGCCAAGTTGGGCTGGGAGCTGCTCACTaGTCCTCTAACCAGGAAGGCTTCTCGGCTCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LLDSQVGLGAAH*SSNQEGFSAPG Trigger: TCCAGGAGCCGAGAAGCCTTCCTGGTTAGAGGAGCAGTGAGCAGCTCCCAGCCCAACTTGGCTATCAAGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033171.15 ENSMUST00000137931.8 ENSMUST00000209870.2 |
||
| 3UTR CCA 72 bp | GCAGCTTCTCATATTTGTCCCGATGGGTCTGGAAAGTaGCCTGGGCACTCTCAAGTCGACCACGAGTCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: AASHICPDGSGK*PGHSQVDHESL Trigger: CAGGGACTCGTGGTCGACTTGAGAGTGCCCAGGCCACTTTCCAGACCCATCGGGACAAATATGAGAAGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033171.15 ENSMUST00000137931.8 ENSMUST00000209870.2 |
||
| 3UTR CCA 72 bp | TCTCCCCGCAGCTTCTCATATTTGTCCCGATGGGTCTaGAAAGTGGCCTGGGCACTCTCAAGTCGACCACGA | + |
|
Preference number: 3 (lower is better) Translates to: SPRSFSYLSRWV*KVAWALSSRPR Trigger: TCGTGGTCGACTTGAGAGTGCCCAGGCCACTTTCCAGACCCATCGGGACAAATATGAGAAGCTGCGGGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033171.15 ENSMUST00000137931.8 ENSMUST00000209870.2 |
||
| 3UTR CCA 72 bp | GCCACATCTCCCCGCAGCTTCTCATATTTGTCCCGATaGGTCTGGAAAGTGGCCTGGGCACTCTCAAGTCGA | + |
|
Preference number: 3 (lower is better) Translates to: ATSPRSFSYLSR*VWKVAWALSSR Trigger: TCGACTTGAGAGTGCCCAGGCCACTTTCCAGACCCATCGGGACAAATATGAGAAGCTGCGGGGAGATGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033171.15 ENSMUST00000137931.8 ENSMUST00000209870.2 |
||
| 3UTR-3UTR CAA 90 bp | GAACTGCTGAAGAGTCTGCTCCAGCTGTTTCTGGTTCCCAGCGAAGTAGGCAGATCCAGGAACTTCAGCTaGATGGCCACATCTCCCCGC | + |
|
Preference number: 3 (lower is better) Translates to: ELLKSLLQLFLVPSEVGRSRNFS*MATSPR Trigger: GCGGGGAGATGTGGCCATCAAGCTGAAGTTCCTGGA...TCTGCCTACTTCGCTGGGAACCAGAAACAGCTGGAGCAGACTCTTCAGCAGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033171.15 ENSMUST00000137931.8 ENSMUST00000209870.2 |
||
| 3UTR-3UTR CAA 90 bp | CACAGTTCAACTGGGTGGGTGGATGAGGGGAGGGCCCATTCAGATGCAGGGCCATGCAATGGACACACATaGAGGAGGGAACAAAGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: HSSTGWVDEGRAHSDAGPCNGHT*RREQRV Trigger: TACCCTTTGTTCCCTCCTCAATGTGTGTCCATTGCA...TGGCCCTGCATCTGAATGGGCCCTCCCCTCATCCACCCACCCAGTTGAACTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033171.15 ENSMUST00000084782.10 ENSMUST00000131446.8 ENSMUST00000137931.8 |
||
| 3UTR TCA 72 bp | TTGGCCCAGAGGAGCCCAAGAAGAGCTGCCATTGGCTaGCAGAACCTTTTGAGGTCCTGTCTTTGGTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LAQRSPRRAAIG*QNLLRSCLWSG Trigger: CCCTGACCAAAGACAGGACCTCAAAAGGTTCTGTCAGCCAATGGCAGCTCTTCTTGGGCTCCTCTGGGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033171.15 ENSMUST00000084782.10 ENSMUST00000131446.8 ENSMUST00000137931.8 |
||
| 3UTR GCA 72 bp | TCATACTTGCGCTTCGTCTCACGCAGCAACTCAATCTaGAGCTCTAGCTCCAGATCCACAGTCCGGGAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: SYLRFVSRSNSI*SSSSRSTVREP Trigger: AGGCTCCCGGACTGTGGATCTGGAGCTAGAGCTGCAGATTGAGTTGCTGCGTGAGACGAAGCGCAAGTATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033171.15 ENSMUST00000157028.2 |
||
| 3UTR GCA 72 bp | CTGACAAAGAGTCAAGTCAGAGTGGTGTGCACCCTGTaGTGTGGGAACCTGCTGACTGGGTTGGTCCCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LTKSQVRVVCTL*CGNLLTGLVPF Trigger: AAAGGGGACCAACCCAGTCAGCAGGTTCCCACAGCACAGGGTGCACACCACTCTGACTTGACTCTTTGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131446.8 |
||
| 3UTR CCA 72 bp | TTCTCATATTTGTCCCGATGGGTCTGGAAAGTGGCCTaGGCACTCTCAAGTCGACCACGAGTCCCTGCATCC | + |
|
Preference number: 3 (lower is better) Translates to: FSYLSRWVWKVA*ALSSRPRVPAS Trigger: GGATGCAGGGACTCGTGGTCGACTTGAGAGTGCCCAGGCCACTTTCCAGACCCATCGGGACAAATATGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033171.15 ENSMUST00000137931.8 ENSMUST00000209870.2 |
||
| 3UTR CCA 72 bp | AAAGAGTCAAGTCAGAGTGGTGTGCACCCTGTGCTGTaGGAACCTGCTGACTGGGTTGGTCCCCTTTCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: KESSQSGVHPVL*EPADWVGPLSP Trigger: TGGAGAAAGGGGACCAACCCAGTCAGCAGGTTCCCACAGCACAGGGTGCACACCACTCTGACTTGACTCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131446.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCGTTGGCTCTGAAAGTGAGGGGCATCAGGCCTTCGGCAGCTTCTCAAACTTACTAGTCCCCCACAAATaGACCTCACTGGGCCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: SVGSESEGHQAFGSFSNLLVPHK*TSLGLL Trigger: AAGCAGGCCCAGTGAGGTCAATTTGTGGGGGACTAG...TAAGTTTGAGAAGCTGCCGAAGGCCTGATGCCCCTCACTTTCAGAGCCAACGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| 3UTR TCA 72 bp | AGCCCCAGAAGCCTGGCTGGGGATTGCAGTTATCACTaGCAAAGAGTCAAGTCAGAGTGGTGTGCACCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: SPRSLAGDCSYH*QRVKSEWCAPC Trigger: ACAGGGTGCACACCACTCTGACTTGACTCTTTGTCAGTGATAACTGCAATCCCCAGCCAGGCTTCTGGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131446.8 |
||
| 3UTR GCA 72 bp | GGCAACACTATTGGCCCAGAGGAGCCCAAGAAGAGCTaGCATTGGCTGACAGAACCTTTTGAGGTCCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: GNTIGPEEPKKS*HWLTEPFEVLS Trigger: AGACAGGACCTCAAAAGGTTCTGTCAGCCAATGGCAGCTCTTCTTGGGCTCCTCTGGGCCAATAGTGTTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033171.15 ENSMUST00000084782.10 ENSMUST00000131446.8 ENSMUST00000137931.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCGGCCCAGCTGCAGGACACTTTCATACTTGCGCTTCGTCTCACGCAGCAACTGTGCACTTATATGTGTaGATGCCCCATTTCTTGACG | + |
|
Preference number: 3 (lower is better) Translates to: PGPAAGHFHTCASSHAATVHLYV*MPHFLT Trigger: CGTCAAGAAATGGGGCATCAACACATATAAGTGCAC...AGTTGCTGCGTGAGACGAAGCGCAAGTATGAAAGTGTCCTGCAGCTGGGCCGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033171.15 ENSMUST00000157028.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCCAGCTGCAGGACACTTTCATACTTGCGCTTCGTCTCACGCAGCAACTCAATAGGACACTTTCATACTaGCGCTTCGTCTCACGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: AQLQDTFILALRLTQQLNRTLSY*RFVSRS Trigger: GCTGCGTGAGACGAAGCGCAAGTATGAAAGTGTCCT...ATTGAGTTGCTGCGTGAGACGAAGCGCAAGTATGAAAGTGTCCTGCAGCTGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033171.15 ENSMUST00000157028.2 |
||
| 3UTR TCA 72 bp | CTTCAACAAGAGCAGTGCAGGTTGCAGCAGGTGCGGTaGGAATGCCTTTATCTCTGCGGTAGCTACTCACTG | + |
|
Preference number: 3 (lower is better) Translates to: LQQEQCRLQQVR*ECLYLCGSYSL Trigger: CAGTGAGTAGCTACCGCAGAGATAAAGGCATTCTCACCGCACCTGCTGCAACCTGCACTGCTCTTGTTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131446.8 |
||
| 3UTR GCA 72 bp | CAGTTATCACTGACAAAGAGTCAAGTCAGAGTGGTGTaGACCCTGTGCTGTGGGAACCTGCTGACTGGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: QLSLTKSQVRVV*TLCCGNLLTGL Trigger: CAACCCAGTCAGCAGGTTCCCACAGCACAGGGTGCACACCACTCTGACTTGACTCTTTGTCAGTGATAACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131446.8 |
||
| 3UTR-3UTR CAA 90 bp | TATTTGTCCCGATGGGTCTGGAAAGTGGCCTGGGCACTCTCAAGTCGACCACGAGCAGCCTCATACTGTTaGACAGTCATGAGTGTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: YLSRWVWKVAWALSSRPRAASYC*TVMSVS Trigger: AGACACACTCATGACTGTCAAACAGTATGAGGCTGC...TCGTGGTCGACTTGAGAGTGCCCAGGCCACTTTCCAGACCCATCGGGACAAATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033171.15 ENSMUST00000137931.8 ENSMUST00000209870.2 |
||
| 3UTR-3UTR CAA 90 bp | CATACTTGCGCTTCGTCTCACGCAGCAACTCAATCTGCAGCTCTAGCTCCAGATCTAGTTTCATTGAGGTaGGGTCCTGACACCATCACC | + |
|
Preference number: 3 (lower is better) Translates to: HTCASSHAATQSAALAPDLVSLR*GPDTIT Trigger: GGTGATGGTGTCAGGACCCAACCTCAATGAAACTAG...ATCTGGAGCTAGAGCTGCAGATTGAGTTGCTGCGTGAGACGAAGCGCAAGTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157028.2 |
||
| 3UTR GCA 72 bp | GGGGCATCAGGCCTTCGGCAGCTTCTCAAACTTAGCTaGAGCTCTTCTGAATTCATAGGAACTGAATGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: GASGLRQLLKLS*SSSEFIGTECK Trigger: CTTGCATTCAGTTCCTATGAATTCAGAAGAGCTGCAGCTAAGTTTGAGAAGCTGCCGAAGGCCTGATGCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| 3UTR GCA 72 bp | TTTGACTTCAACAAGAGCAGTGCAGGTTGCAGCAGGTaGGGTGAGAATGCCTTTATCTCTGCGGTAGCTACT | + |
|
Preference number: 3 (lower is better) Translates to: FDFNKSSAGCSR*GENAFISAVAT Trigger: AGTAGCTACCGCAGAGATAAAGGCATTCTCACCGCACCTGCTGCAACCTGCACTGCTCTTGTTGAAGTCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131446.8 |
||
| 3UTR-3UTR CAA 90 bp | AACTCAATCTGCAGCTCTAGCTCCAGATCCACAGTCCGGGAGCCTCGGCCAAATTTGATGCCCCATTTCTaGACGATGTCAAACTTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: NSICSSSSRSTVREPRPNLMPHF*TMSNFS Trigger: AGAAAAGTTTGACATCGTCAAGAAATGGGGCATCAA...ATTTGGCCGAGGCTCCCGGACTGTGGATCTGGAGCTAGAGCTGCAGATTGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033171.15 ENSMUST00000157028.2 |
||
| 3UTR GCA 72 bp | CAATTAAGGTTTGACTTCAACAAGAGCAGTGCAGGTTaGAGCAGGTGCGGTGAGAATGCCTTTATCTCTGCG | + |
|
Preference number: 3 (lower is better) Translates to: QLRFDFNKSSAG*SRCGENAFISA Trigger: CGCAGAGATAAAGGCATTCTCACCGCACCTGCTGCAACCTGCACTGCTCTTGTTGAAGTCAAACCTTAATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131446.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCAGCTTGATGGCCACATCTCCCCGCAGCTTCTCATATTTGTCCCGATGGGTCTTGATGCCCCATTTCTaGACGATGTCAAACTTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: FSLMATSPRSFSYLSRWVLMPHF*TMSNFS Trigger: AGAAAAGTTTGACATCGTCAAGAAATGGGGCATCAA...GACCCATCGGGACAAATATGAGAAGCTGCGGGGAGATGTGGCCATCAAGCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033171.15 |
||
| 3UTR-3UTR CAA 90 bp | TCCCACTGCATCTTGTATCCTAGCATTTCTCATTGTATTGTAGTTGCCTGGTTACGCCCAGTGTCCTTCTaGATAGCCAAGTTGGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SHCILYPSISHCIVVAWLRPVSF*IAKLGW Trigger: CCAGCCCAACTTGGCTATCAAGAAGGACACTGGGCG...TAACCAGGCAACTACAATACAATGAGAAATGCTAGGATACAAGATGCAGTGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| 3UTR GCA 72 bp | TCCAGGAAGTATGTTCTCTACACTTCGCTTCTCCCGTaGTGCCAGACCTCTAAGAGGTTTCTTAGTTCCATT | + |
|
Preference number: 3 (lower is better) Translates to: SRKYVLYTSLLP*CQTSKRFLSSI Trigger: AATGGAACTAAGAAACCTCTTAGAGGTCTGGCAGCACGGGAGAAGCGAAGTGTAGAGAACATACTTCCTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131446.8 |
||
| 3UTR GCA 72 bp | AGGAAGTATGTTCTCTACACTTCGCTTCTCCCGTGCTaGCAGACCTCTAAGAGGTTTCTTAGTTCCATTTCT | + |
|
Preference number: 3 (lower is better) Translates to: RKYVLYTSLLPC*QTSKRFLSSIS Trigger: AGAAATGGAACTAAGAAACCTCTTAGAGGTCTGGCAGCACGGGAGAAGCGAAGTGTAGAGAACATACTTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131446.8 |
||
| 3UTR GCA 72 bp | CTTAGCTGCAGCTCTTCTGAATTCATAGGAACTGAATaGAAGATTACTGGGCATTTCTTACCAATCCACCCT | + |
|
Preference number: 3 (lower is better) Translates to: LSCSSSEFIGTE*KITGHFLPIHP Trigger: AGGGTGGATTGGTAAGAAATGCCCAGTAATCTTGCATTCAGTTCCTATGAATTCAGAAGAGCTGCAGCTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| 3UTR TCA 72 bp | GGGAGTTTTCTTGTGATTTCTTATACAATTAAGGTTTaGCTTCAACAAGAGCAGTGCAGGTTGCAGCAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: GSFLVISYTIKV*LQQEQCRLQQV Trigger: CACCTGCTGCAACCTGCACTGCTCTTGTTGAAGTCAAACCTTAATTGTATAAGAAATCACAAGAAAACTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131446.8 |
||
| 3UTR TCA 72 bp | TTTGGGCTCTGCTTTCAGGTTCTGTCTCCAACCATTTaGAGATTCAATGCCCTTACAACAAAAATCCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: FGLCFQVLSPTI*RFNALTTKILS Trigger: ACTGAGGATTTTTGTTGTAAGGGCATTGAATCTTCAAATGGTTGGAGACAGAACCTGAAAGCAGAGCCCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131446.8 |
||
| 3UTR GCA 72 bp | CTTTCAGGTTCTGTCTCCAACCATTTGAAGATTCAATaGCCTTACAACAAAAATCCTCAGTGGCCCATAAAG | + |
|
Preference number: 3 (lower is better) Translates to: LSGSVSNHLKIQ*PYNKNPQWPIK Trigger: CTTTATGGGCCACTGAGGATTTTTGTTGTAAGGGCATTGAATCTTCAAATGGTTGGAGACAGAACCTGAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131446.8 |
||
| 3UTR TCA 72 bp | CAAGCCCTGTCTAAAGTGCTGCTGGGAGTTTTCTTGTaGTTTCTTATACAATTAAGGTTTGACTTCAACAAG | + |
|
Preference number: 3 (lower is better) Translates to: QALSKVLLGVFL*FLIQLRFDFNK Trigger: CTTGTTGAAGTCAAACCTTAATTGTATAAGAAATCACAAGAAAACTCCCAGCAGCACTTTAGACAGGGCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131446.8 |
||
| CDS-3UTR GCA 90 bp | GCAAAGGACATCCCATGTCCAATCTCCTCCACCCTGGGGCTGCCCCGCCCAGTGGAGGTGGGCTGTCAGTaGCCGGCCCAGCTGCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: AKDIPCPISSTLGLPRPVEVGCQ*PAQLQD Trigger: GTCCTGCAGCTGGGCCGGGCACTGACAGCCCACCTC...CACTGGGCGGGGCAGCCCCAGGGTGGAGGAGATTGGACATGGGATGTCCTTTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR TCA 90 bp | TGGGTGGATGAGGGGAGGGCCCATTCAGATGCAGGGCCACAAATGCAGCTCCCCCAGACCCTGTGGGGATaGGTCCGTCACCAGAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: WVDEGRAHSDAGPQMQLPQTLWG*VRHQSP Trigger: GGGGCTCTGGTGACGGACTCATCCCCACAGGGTCTG...GGGGAGCTGCATTTGTGGCCCTGCATCTGAATGGGCCCTCCCCTCATCCACCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 ENSMUST00000137931.8 |
||
| CDS-3UTR GCA 90 bp | TTCTGGGCCTACGGGCCTACGGGCCTCTTCAGACCACAGCAGTGGGCAAAACTGGAGGTGGGCTGTCAGTaGCCGGCCCAGCTGCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FWAYGPTGLFRPQQWAKLEVGCQ*PAQLQD Trigger: GTCCTGCAGCTGGGCCGGGCACTGACAGCCCACCTC...CAGTTTTGCCCACTGCTGTGGTCTGAAGAGGCCCGTAGGCCCGTAGGCCCAGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR TCA 90 bp | GCAAAGGACATCCCATGTCCAATCTCCTCCACCCTGGGGCTGCCCCGCCCAGTGACCAGGGCCAGAGGGTaGCGTGCTGTGAGATGGATG | + |
|
Preference number: 4 (lower is better) Translates to: AKDIPCPISSTLGLPRPVTRARG*RAVRWM Trigger: CATCCATCTCACAGCACGTCACCCTCTGGCCCTGGT...CACTGGGCGGGGCAGCCCCAGGGTGGAGGAGATTGGACATGGGATGTCCTTTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 ENSMUST00000137931.8 |
||
| CDS-3UTR TCA 90 bp | GGGGCTGCCCCGCCCAGTGTCCTTCTTGATAGCCAAGTTGGGCTGGGAGCTGCTACCAGGGCCAGAGGGTaGCGTGCTGTGAGATGGATG | + |
|
Preference number: 4 (lower is better) Translates to: GAAPPSVLLDSQVGLGAATRARG*RAVRWM Trigger: CATCCATCTCACAGCACGTCACCCTCTGGCCCTGGT...AGCAGCTCCCAGCCCAACTTGGCTATCAAGAAGGACACTGGGCGGGGCAGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000137931.8 ENSMUST00000209870.2 |
||
| CDS-3UTR GCA 90 bp | GGGGCTGCCCCGCCCAGTGTCCTTCTTGATAGCCAAGTTGGGCTGGGAGCTGCTCCTGACACCATCACCTaGTGGAGGTCCTGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GAAPPSVLLDSQVGLGAAPDTIT*WRSCSS Trigger: GCTGGAGCAGGACCTCCAGCAGGTGATGGTGTCAGG...AGCAGCTCCCAGCCCAACTTGGCTATCAAGAAGGACACTGGGCGGGGCAGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033171.15 ENSMUST00000137931.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCTTCTGGGCCTACGGGCCTACGGGCCTCTTCAGACCACAGCAGTGGGCAAGACACCATCACCTGCTaGAGGTCCTGCTCCAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AASGPTGLRASSDHSSGQDTITC*RSCSSP Trigger: TGGGCTGGAGCAGGACCTCCAGCAGGTGATGGTGTC...TTGCCCACTGCTGTGGTCTGAAGAGGCCCGTAGGCCCGTAGGCCCAGAAGCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033171.15 ENSMUST00000084782.10 ENSMUST00000131446.8 ENSMUST00000137931.8 |
||
| CDS-3UTR GCA 90 bp | CACAGTTCAACTGGGTGGGTGGATGAGGGGAGGGCCCATTCAGATGCAGGGCCAACTTTTCTCCAGCGATaGCCCGGGCCACCTCGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: HSSTGWVDEGRAHSDAGPTFLQR*PGPPRH Trigger: GTGACGAGGTGGCCCGGGGCATCGCTGGAGAAAAGT...TGGCCCTGCATCTGAATGGGCCCTCCCCTCATCCACCCACCCAGTTGAACTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 ENSMUST00000137931.8 |
||
| CDS-3UTR GCA 90 bp | GGGGCTGCCCCGCCCAGTGTCCTTCTTGATAGCCAAGTTGGGCTGGGAGCTGCTAGTGCCCGGCCCAGCTaGAGGACACTTTCATACTTG | + |
|
Preference number: 4 (lower is better) Translates to: GAAPPSVLLDSQVGLGAASARPS*RTLSYL Trigger: CAAGTATGAAAGTGTCCTGCAGCTGGGCCGGGCACT...AGCAGCTCCCAGCCCAACTTGGCTATCAAGAAGGACACTGGGCGGGGCAGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209870.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGGCTGCCCCGCCCAGTGTCCTTCTTGATAGCCAAGTTGGGCTGGGAGCTGTTCCTCCTGAAGCTCTaGGGACTTCTGGCTGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LGLPRPVSFLIAKLGWELFLLKL*GLLAEV Trigger: GACCTCAGCCAGAAGTCCCCAGAGCTTCAGGAGGAA...CAGCTCCCAGCCCAACTTGGCTATCAAGAAGGACACTGGGCGGGGCAGCCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGGACATCCCATGTCCAATCTCCTCCACCCTGGGGCTGCCCCGCCCAGTGTTTGTCCCGATGGGTCTaGAAAGTGGCCTGGGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: QRTSHVQSPPPWGCPAQCLSRWV*KVAWAL Trigger: GAGTGCCCAGGCCACTTTCCAGACCCATCGGGACAA...ACACTGGGCGGGGCAGCCCCAGGGTGGAGGAGATTGGACATGGGATGTCCTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGGACATCCCATGTCCAATCTCCTCCACCCTGGGGCTGCCCCGCCCAGTGTAGGCTTCTCGGCTCCTaGAGGCCGCAGCTTGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: QRTSHVQSPPPWGCPAQCRLLGS*RPQLDV Trigger: AACATCAAGCTGCGGCCTCCAGGAGCCGAGAAGCCT...ACACTGGGCGGGGCAGCCCCAGGGTGGAGGAGATTGGACATGGGATGTCCTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR TCA 90 bp | CAGCTTCTGGGCCTACGGGCCTACGGGCCTCTTCAGACCACAGCAGTGGGCAAAATTGAGGTTGGGTCCTaGCACCATCACCTGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QLLGLRAYGPLQTTAVGKIEVGS*HHHLLE Trigger: CTCCAGCAGGTGATGGTGTCAGGACCCAACCTCAAT...TTTGCCCACTGCTGTGGTCTGAAGAGGCCCGTAGGCCCGTAGGCCCAGAAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033171.15 ENSMUST00000084782.10 ENSMUST00000131446.8 ENSMUST00000137931.8 |
||
| CDS-3UTR TCA 90 bp | CCCGATGGGTCTGGAAAGTGGCCTGGGCACTCTCAAGTCGACCACGAGTCCCTGATTGAGGTTGGGTCCTaGCACCATCACCTGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PDGSGKWPGHSQVDHESLIEVGS*HHHLLE Trigger: CTCCAGCAGGTGATGGTGTCAGGACCCAACCTCAAT...CAGGGACTCGTGGTCGACTTGAGAGTGCCCAGGCCACTTTCCAGACCCATCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033171.15 ENSMUST00000137931.8 |
||
| CDS-3UTR TCA 90 bp | CTGTCAGTGCCCGGCCCAGCTGCAGGACACTTTCATACTTGCGCTTCGTCTCACAGTTCTCTGTGGGGATaGGTCCGTCACCAGAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LSVPGPAAGHFHTCASSHSSLWG*VRHQSP Trigger: GGGGCTCTGGTGACGGACTCATCCCCACAGAGAACT...GTGAGACGAAGCGCAAGTATGAAAGTGTCCTGCAGCTGGGCCGGGCACTGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033171.15 |
||
| CDS-3UTR CCA 90 bp | TGGGCACTCTCAAGTCGACCACGAGTCCCTGCATCCCGGGGCCCTAGGCTCAGCGCTTCGCCATTTCCGTaGATGGGAATCTCCATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: WALSSRPRVPASRGPRLSASPFP*MGISIV Trigger: CACAATGGAGATTCCCATCCACGGAAATGGCGAAGC...GCTGAGCCTAGGGCCCCGGGATGCAGGGACTCGTGGTCGACTTGAGAGTGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033171.15 ENSMUST00000137931.8 |
||
| CDS-3UTR TCA 90 bp | GTAAGTGGCAAAGGACATCCCATGTCCAATCTCCTCCACCCTGGGGCTGCCCCGATTGAGGTTGGGTCCTaGCACCATCACCTGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VSGKGHPMSNLLHPGAAPIEVGS*HHHLLE Trigger: CTCCAGCAGGTGATGGTGTCAGGACCCAACCTCAAT...CGGGGCAGCCCCAGGGTGGAGGAGATTGGACATGGGATGTCCTTTGCCACTTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033171.15 ENSMUST00000084782.10 ENSMUST00000131446.8 ENSMUST00000137931.8 |
||
| CDS-3UTR TCA 90 bp | CTTCTCATATTTGTCCCGATGGGTCTGGAAAGTGGCCTGGGCACTCTCAAGTCGCAGACCCTGTGGGGATaGGTCCGTCACCAGAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLIFVPMGLESGLGTLKSQTLWG*VRHQSP Trigger: GGGGCTCTGGTGACGGACTCATCCCCACAGGGTCTG...CGACTTGAGAGTGCCCAGGCCACTTTCCAGACCCATCGGGACAAATATGAGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137931.8 |
||
| CDS-3UTR GCA 90 bp | AGCTCCAGATCCACAGTCCGGGAGCCTCGGCCAAATCTCTCTGATAACAGCTGCCCTGACACCATCACCTaGTGGAGGTCCTGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSRSTVREPRPNLSDNSCPDTIT*WRSCSS Trigger: GCTGGAGCAGGACCTCCAGCAGGTGATGGTGTCAGG...GCAGCTGTTATCAGAGAGATTTGGCCGAGGCTCCCGGACTGTGGATCTGGAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033171.15 |
||
| CDS-3UTR GCA 90 bp | CTTCTGGGCCTACGGGCCTACGGGCCTCTTCAGACCACAGCAGTGGGCAAAACTAGTGCCCGGCCCAGCTaGAGGACACTTTCATACTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLGLRAYGPLQTTAVGKTSARPS*RTLSYL Trigger: CAAGTATGAAAGTGTCCTGCAGCTGGGCCGGGCACT...AGTTTTGCCCACTGCTGTGGTCTGAAGAGGCCCGTAGGCCCGTAGGCCCAGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR GCA 90 bp | AGCTTCTGGGCCTACGGGCCTACGGGCCTCTTCAGACCACAGCAGTGGGCAAAAGCATCACCTAGTGCATaGTGGGTCTGCAACAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SFWAYGPTGLFRPQQWAKASPSA*WVCNRL Trigger: CAGCCTGTTGCAGACCCAGCATGCACTAGGTGATGC...TTTTGCCCACTGCTGTGGTCTGAAGAGGCCCGTAGGCCCGTAGGCCCAGAAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR CCA 90 bp | ATTTGTCCCGATGGGTCTGGAAAGTGGCCTGGGCACTCTCAAGTCGACCACGAGGACACCATCACCTGCTaGAGGTCCTGCTCCAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ICPDGSGKWPGHSQVDHEDTITC*RSCSSP Trigger: TGGGCTGGAGCAGGACCTCCAGCAGGTGATGGTGTC...CTCGTGGTCGACTTGAGAGTGCCCAGGCCACTTTCCAGACCCATCGGGACAAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033171.15 ENSMUST00000137931.8 |
||
| CDS-3UTR CCA 90 bp | AGCTTCTGGGCCTACGGGCCTACGGGCCTCTTCAGACCACAGCAGTGGGCAAAAGATGGGTCTGGAAAGTaGCCTGGGCACTCTCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SFWAYGPTGLFRPQQWAKDGSGK*PGHSQV Trigger: GACTTGAGAGTGCCCAGGCCACTTTCCAGACCCATC...TTTTGCCCACTGCTGTGGTCTGAAGAGGCCCGTAGGCCCGTAGGCCCAGAAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR TCA 90 bp | CCAGCAAGTAAGTGGCAAAGGACATCCCATGTCCAATCTCCTCCACCCTGGGGCCTGGGGACTTCTGGCTaGGGTCAGCAAAGGCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: PASKWQRTSHVQSPPPWGLGTSG*GQQRHH Trigger: GTGATGCCTTTGCTGACCTCAGCCAGAAGTCCCCAG...GCCCCAGGGTGGAGGAGATTGGACATGGGATGTCCTTTGCCACTTACTTGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR CCA 90 bp | AGCTTCTGGGCCTACGGGCCTACGGGCCTCTTCAGACCACAGCAGTGGGCAAAACGCCATTTCCGTGGATaGGAATCTCCATTGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SFWAYGPTGLFRPQQWAKRHFRG*ESPLWL Trigger: CAGCCACAATGGAGATTCCCATCCACGGAAATGGCG...TTTTGCCCACTGCTGTGGTCTGAAGAGGCCCGTAGGCCCGTAGGCCCAGAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033171.15 ENSMUST00000084782.10 ENSMUST00000131446.8 ENSMUST00000137931.8 |
||
| CDS-3UTR CCA 90 bp | AGGAGGGAACAAAGGGTACTGGAGGCAACACTATTGGCCCAGAGGAGCCCAAGAGACACCATCACCTGCTaGAGGTCCTGCTCCAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RREQRVLEATLLAQRSPRDTITC*RSCSSP Trigger: TGGGCTGGAGCAGGACCTCCAGCAGGTGATGGTGTC...TCTTGGGCTCCTCTGGGCCAATAGTGTTGCCTCCAGTACCCTTTGTTCCCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033171.15 ENSMUST00000084782.10 ENSMUST00000131446.8 ENSMUST00000137931.8 |
||
| 3UTR CAA 72 bp | GTCAGTGCCCGGCCCAGCTGCAGGACACTTTCATACTaGCGCTTCGTCTCACGCAGCAACTCAATCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VSARPSCRTLSY*RFVSRSNSICS Trigger: GCTGCAGATTGAGTTGCTGCGTGAGACGAAGCGCAAGTATGAAAGTGTCCTGCAGCTGGGCCGGGCACTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033171.15 ENSMUST00000157028.2 |
||
| CDS-3UTR GCA 90 bp | AGCGTTGGCTCTGAAAGTGAGGGGCATCAGGCCTTCGGCAGCTTCTCAAACTTACCTGACACCATCACCTaGTGGAGGTCCTGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SVGSESEGHQAFGSFSNLPDTIT*WRSCSS Trigger: GCTGGAGCAGGACCTCCAGCAGGTGATGGTGTCAGG...TAAGTTTGAGAAGCTGCCGAAGGCCTGATGCCCCTCACTTTCAGAGCCAACGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR GCA 90 bp | AGCTTCTGGGCCTACGGGCCTACGGGCCTCTTCAGACCACAGCAGTGGGCAAAAGGACACTTTCATACTTaGGCTTCGTCTCACGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SFWAYGPTGLFRPQQWAKGHFHT*ASSHAA Trigger: TGCTGCGTGAGACGAAGCGCAAGTATGAAAGTGTCC...TTTTGCCCACTGCTGTGGTCTGAAGAGGCCCGTAGGCCCGTAGGCCCAGAAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| 3UTR CAA 72 bp | AGCTTGATGGCCACATCTCCCCGCAGCTTCTCATATTaGTCCCGATGGGTCTGGAAAGTGGCCTGGGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: SLMATSPRSFSY*SRWVWKVAWAL Trigger: GAGTGCCCAGGCCACTTTCCAGACCCATCGGGACAAATATGAGAAGCTGCGGGGAGATGTGGCCATCAAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033171.15 ENSMUST00000137931.8 ENSMUST00000209870.2 |
||
| CDS-3UTR GCA 90 bp | GATCTGGGAATGAAGCCCAGTGGCCAGGAAGATAAAGGGCAGGACAGCAGCTTCAGTGCCCGGCCCAGCTaGAGGACACTTTCATACTTG | + |
|
Preference number: 4 (lower is better) Translates to: DLGMKPSGQEDKGQDSSFSARPS*RTLSYL Trigger: CAAGTATGAAAGTGTCCTGCAGCTGGGCCGGGCACT...GAAGCTGCTGTCCTGCCCTTTATCTTCCTGGCCACTGGGCTTCATTCCCAGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR GCA 90 bp | GTCTTCCATGGTCTTGGTGACCAGTGTGTTGATGCTAGAGACAAAGAAGTTCACGAGGTGGGCTGTCAGTaGCCGGCCCAGCTGCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VFHGLGDQCVDARDKEVHEVGCQ*PAQLQD Trigger: GTCCTGCAGCTGGGCCGGGCACTGACAGCCCACCTC...GTGAACTTCTTTGTCTCTAGCATCAACACACTGGTCACCAAGACCATGGAAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209870.2 |
||
| CDS-3UTR GCA 90 bp | GATCTGGGAATGAAGCCCAGTGGCCAGGAAGATAAAGGGCAGGACAGCAGCTTCGCATCACCTAGTGCATaGTGGGTCTGCAACAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DLGMKPSGQEDKGQDSSFASPSA*WVCNRL Trigger: CAGCCTGTTGCAGACCCAGCATGCACTAGGTGATGC...GAAGCTGCTGTCCTGCCCTTTATCTTCCTGGCCACTGGGCTTCATTCCCAGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR CCA 90 bp | CTGTCAGTGCCCGGCCCAGCTGCAGGACACTTTCATACTTGCGCTTCGTCTCACTGGGAATCTCCATTGTaGCTGCCTTCCCTAGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: LSVPGPAAGHFHTCASSHWESPL*LPSLES Trigger: GGATTCTAGGGAAGGCAGCCACAATGGAGATTCCCA...GTGAGACGAAGCGCAAGTATGAAAGTGTCCTGCAGCTGGGCCGGGCACTGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033171.15 ENSMUST00000157028.2 |
||
| CDS-3UTR CCA 90 bp | GATCTGGGAATGAAGCCCAGTGGCCAGGAAGATAAAGGGCAGGACAGCAGCTTCGTCTGGAAAGTGGCCTaGGCACTCTCAAGTCGACCA | + |
|
Preference number: 4 (lower is better) Translates to: DLGMKPSGQEDKGQDSSFVWKVA*ALSSRP Trigger: TGGTCGACTTGAGAGTGCCCAGGCCACTTTCCAGAC...GAAGCTGCTGTCCTGCCCTTTATCTTCCTGGCCACTGGGCTTCATTCCCAGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR CCA 90 bp | GGGGCATCAGGCCTTCGGCAGCTTCTCAAACTTAGCTGCAGCTCTTCTGAATTCTTGTCCCGATGGGTCTaGAAAGTGGCCTGGGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: GASGLRQLLKLSCSSSEFLSRWV*KVAWAL Trigger: GAGTGCCCAGGCCACTTTCCAGACCCATCGGGACAA...GAATTCAGAAGAGCTGCAGCTAAGTTTGAGAAGCTGCCGAAGGCCTGATGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR CCA 90 bp | AGAGTGGTGTGCACCCTGTGCTGTGGGAACCTGCTGACTGGGTTGGTCCCCTTTTCATATTTGTCCCGATaGGTCTGGAAAGTGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RVVCTLCCGNLLTGLVPFSYLSR*VWKVAW Trigger: CCAGGCCACTTTCCAGACCCATCGGGACAAATATGA...AAAGGGGACCAACCCAGTCAGCAGGTTCCCACAGCACAGGGTGCACACCACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131446.8 |
||
| CDS-3UTR TCA 90 bp | AGACAAAGAAGTTCACAGCCCCTAGCAGCGTCTCCCCATTCTTGCACAGCAGCTATTGAGGTTGGGTCCTaGCACCATCACCTGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RQRSSQPLAASPHSCTAAIEVGS*HHHLLE Trigger: CTCCAGCAGGTGATGGTGTCAGGACCCAACCTCAAT...AGCTGCTGTGCAAGAATGGGGAGACGCTGCTAGGGGCTGTGAACTTCTTTGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033171.15 |
||
| CDS-3UTR TCA 90 bp | GTAAGTGGCAAAGGACATCCCATGTCCAATCTCCTCCACCCTGGGGCTGCCCCGGCTTGTGCATCACCTTaGTCTTGTTTTCTTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VSGKGHPMSNLLHPGAAPACASP*SCFLPG Trigger: TCCTGGAAGAAAACAAGATCAAGGTGATGCACAAGC...CGGGGCAGCCCCAGGGTGGAGGAGATTGGACATGGGATGTCCTTTGCCACTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR GCA 90 bp | CCAGCAAGTAAGTGGCAAAGGACATCCCATGTCCAATCTCCTCCACCCTGGGGCTGGAAGAGCAGCAGCTaGTTGTGCATCACCTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: PASKWQRTSHVQSPPPWGWKSSS*LCITLI Trigger: GATCAAGGTGATGCACAAGCAGCTGCTGCTCTTCCA...GCCCCAGGGTGGAGGAGATTGGACATGGGATGTCCTTTGCCACTTACTTGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR CCA 90 bp | AGCTCCAGATCCACAGTCCGGGAGCCTCGGCCAAATCTCTCTGATAACAGCTGCGCTTCGCCATTTCCGTaGATGGGAATCTCCATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSRSTVREPRPNLSDNSCASPFP*MGISIV Trigger: CACAATGGAGATTCCCATCCACGGAAATGGCGAAGC...GCAGCTGTTATCAGAGAGATTTGGCCGAGGCTCCCGGACTGTGGATCTGGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033171.15 ENSMUST00000157028.2 |
||
| CDS-3UTR CCA 90 bp | GGGGCATCAGGCCTTCGGCAGCTTCTCAAACTTAGCTGCAGCTCTTCTGAATTCAGCTCTGGGGACTTCTaGCTGAGGTCAGCAAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GASGLRQLLKLSCSSSEFSSGDF*LRSAKA Trigger: TGCCTTTGCTGACCTCAGCCAGAAGTCCCCAGAGCT...GAATTCAGAAGAGCTGCAGCTAAGTTTGAGAAGCTGCCGAAGGCCTGATGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR CCA 90 bp | GAACAAAGGGTACTGGAGGCAACACTATTGGCCCAGAGGAGCCCAAGAAGAGCTAGCTCTGGGGACTTCTaGCTGAGGTCAGCAAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EQRVLEATLLAQRSPRRASSGDF*LRSAKA Trigger: TGCCTTTGCTGACCTCAGCCAGAAGTCCCCAGAGCT...AGCTCTTCTTGGGCTCCTCTGGGCCAATAGTGTTGCCTCCAGTACCCTTTGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR TCA 90 bp | CCTGCTTTTATGAAAGGTTTATTCCTAGTGCTAGAACCCAGTCTTCTGGGGTTCCAGACCCTGTGGGGATaGGTCCGTCACCAGAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PAFMKGLFLVLEPSLLGFQTLWG*VRHQSP Trigger: GGGGCTCTGGTGACGGACTCATCCCCACAGGGTCTG...GAACCCCAGAAGACTGGGTTCTAGCACTAGGAATAAACCTTTCATAAAAGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR GCA 90 bp | AAGCACAGTTCAACTGGGTGGGTGGATGAGGGGAGGGCCCATTCAGATGCAGGGAGCAGCAGCTGCTTGTaGATCACCTTGATCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KHSSTGWVDEGRAHSDAGSSSCL*ITLILF Trigger: AAACAAGATCAAGGTGATGCACAAGCAGCTGCTGCT...CCCTGCATCTGAATGGGCCCTCCCCTCATCCACCCACCCAGTTGAACTGTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR GCA 90 bp | GAACTGCTGAAGAGTCTGCTCCAGCTGTTTCTGGTTCCCAGCGAAGTAGGCAGAATTCCTCCTAGTGCATaGTGGGTCTGCAACAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ELLKSLLQLFLVPSEVGRIPPSA*WVCNRL Trigger: CAGCCTGTTGCAGACCCAGCATGCACTAGGAGGAAT...TCTGCCTACTTCGCTGGGAACCAGAAACAGCTGGAGCAGACTCTTCAGCAGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209870.2 |
||
| CDS-3UTR CCA 90 bp | AGGAGGGAACAAAGGGTACTGGAGGCAACACTATTGGCCCAGAGGAGCCCAAGATCATATTTGTCCCGATaGGTCTGGAAAGTGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RREQRVLEATLLAQRSPRSYLSR*VWKVAW Trigger: CCAGGCCACTTTCCAGACCCATCGGGACAAATATGA...TCTTGGGCTCCTCTGGGCCAATAGTGTTGCCTCCAGTACCCTTTGTTCCCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR TCA 90 bp | ATGAGTGTGTCTTCCATGGTCTTGGTGACCAGTGTGTTGATGCTAGAGACAAAGACCAGGGCCAGAGGGTaGCGTGCTGTGAGATGGATG | + |
|
Preference number: 4 (lower is better) Translates to: MSVSSMVLVTSVLMLETKTRARG*RAVRWM Trigger: CATCCATCTCACAGCACGTCACCCTCTGGCCCTGGT...CTTTGTCTCTAGCATCAACACACTGGTCACCAAGACCATGGAAGACACACTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137931.8 ENSMUST00000209870.2 |
||
| CDS-3UTR TCA 90 bp | CCATTGGCCAGGGAGTGTTTTGTCATAGCCTTTGGCTGTGGAGTGAAAGGAAAACTGGGGACTTCTGGCTaGGGTCAGCAAAGGCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: PLARECFVIAFGCGVKGKLGTSG*GQQRHH Trigger: GTGATGCCTTTGCTGACCTCAGCCAGAAGTCCCCAG...TTTTCCTTTCACTCCACAGCCAAAGGCTATGACAAAACACTCCCTGGCCAATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR TCA 90 bp | GGCCAGGGAGTGTTTTGTCATAGCCTTTGGCTGTGGAGTGAAAGGAAAAGATCTCCAGGAACTTCAGCTTaGTGGCCACATCTCCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: GQGVFCHSLWLWSERKRSPGTSA*WPHLPA Trigger: TGCGGGGAGATGTGGCCATCAAGCTGAAGTTCCTGG...AGATCTTTTCCTTTCACTCCACAGCCAAAGGCTATGACAAAACACTCCCTGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR GCA 90 bp | AACAAAGGGTACTGGAGGCAACACTATTGGCCCAGAGGAGCCCAAGAAGAGCTGGGACACTTTCATACTTaGGCTTCGTCTCACGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NKGYWRQHYWPRGAQEELGHFHT*ASSHAA Trigger: TGCTGCGTGAGACGAAGCGCAAGTATGAAAGTGTCC...CAGCTCTTCTTGGGCTCCTCTGGGCCAATAGTGTTGCCTCCAGTACCCTTTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR GCA 90 bp | AAGCCAGCAAGTAAGTGGCAAAGGACATCCCATGTCCAATCTCCTCCACCCTGGTGGAAGAGCAGCAGCTaGTTGTGCATCACCTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: KPASKWQRTSHVQSPPPWWKSSS*LCITLI Trigger: GATCAAGGTGATGCACAAGCAGCTGCTGCTCTTCCA...CCAGGGTGGAGGAGATTGGACATGGGATGTCCTTTGCCACTTACTTGCTGGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR CCA 90 bp | ACGAGCCCAAGCCAGCAAGTAAGTGGCAAAGGACATCCCATGTCCAATCTCCTCTGGGAATCTCCATTGTaGCTGCCTTCCCTAGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: TSPSQQVSGKGHPMSNLLWESPL*LPSLES Trigger: GGATTCTAGGGAAGGCAGCCACAATGGAGATTCCCA...GAGGAGATTGGACATGGGATGTCCTTTGCCACTTACTTGCTGGCTTGGGCTCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033171.15 ENSMUST00000084782.10 ENSMUST00000131446.8 ENSMUST00000137931.8 |
||
| CDS-3UTR CCA 90 bp | ATGAGTGTGTCTTCCATGGTCTTGGTGACCAGTGTGTTGATGCTAGAGACAAAGGACACCATCACCTGCTaGAGGTCCTGCTCCAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: MSVSSMVLVTSVLMLETKDTITC*RSCSSP Trigger: TGGGCTGGAGCAGGACCTCCAGCAGGTGATGGTGTC...CTTTGTCTCTAGCATCAACACACTGGTCACCAAGACCATGGAAGACACACTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033171.15 ENSMUST00000137931.8 |
||
| CDS-3UTR CCA 90 bp | GGCCAGGGAGTGTTTTGTCATAGCCTTTGGCTGTGGAGTGAAAGGAAAAGATCTAGGCTTCTCGGCTCCTaGAGGCCGCAGCTTGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: GQGVFCHSLWLWSERKRSRLLGS*RPQLDV Trigger: AACATCAAGCTGCGGCCTCCAGGAGCCGAGAAGCCT...AGATCTTTTCCTTTCACTCCACAGCCAAAGGCTATGACAAAACACTCCCTGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR TCA 90 bp | AGGAGGGAACAAAGGGTACTGGAGGCAACACTATTGGCCCAGAGGAGCCCAAGAGCTTGTGCATCACCTTaGTCTTGTTTTCTTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RREQRVLEATLLAQRSPRACASP*SCFLPG Trigger: TCCTGGAAGAAAACAAGATCAAGGTGATGCACAAGC...TCTTGGGCTCCTCTGGGCCAATAGTGTTGCCTCCAGTACCCTTTGTTCCCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR GCA 90 bp | CCTGCTTTTATGAAAGGTTTATTCCTAGTGCTAGAACCCAGTCTTCTGGGGTTCCCTGACACCATCACCTaGTGGAGGTCCTGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PAFMKGLFLVLEPSLLGFPDTIT*WRSCSS Trigger: GCTGGAGCAGGACCTCCAGCAGGTGATGGTGTCAGG...GAACCCCAGAAGACTGGGTTCTAGCACTAGGAATAAACCTTTCATAAAAGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCGCAGCTTGATGTTGAACTGCTGAAGAGTCTGCTCCAGCTGTTTCTGGTTTGGGAATCTCCATTGTaGCTGCCTTCCCTAGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: RPQLDVELLKSLLQLFLVWESPL*LPSLES Trigger: GGATTCTAGGGAAGGCAGCCACAATGGAGATTCCCA...AACCAGAAACAGCTGGAGCAGACTCTTCAGCAGTTCAACATCAAGCTGCGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033171.15 ENSMUST00000137931.8 |
||
| CDS-3UTR CCA 90 bp | CTGCAGGACACTTTCATACTTGCGCTTCGTCTCACGCAGCAACTCAATCTGCAGGCTTCGCCATTTCCGTaGATGGGAATCTCCATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LQDTFILALRLTQQLNLQASPFP*MGISIV Trigger: CACAATGGAGATTCCCATCCACGGAAATGGCGAAGC...CTGCAGATTGAGTTGCTGCGTGAGACGAAGCGCAAGTATGAAAGTGTCCTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033171.15 ENSMUST00000157028.2 |
||
| CDS-3UTR CCA 90 bp | GGCCAGGGAGTGTTTTGTCATAGCCTTTGGCTGTGGAGTGAAAGGAAAAGATCTGATGGGTCTGGAAAGTaGCCTGGGCACTCTCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GQGVFCHSLWLWSERKRSDGSGK*PGHSQV Trigger: GACTTGAGAGTGCCCAGGCCACTTTCCAGACCCATC...AGATCTTTTCCTTTCACTCCACAGCCAAAGGCTATGACAAAACACTCCCTGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR GCA 90 bp | AGCGTTGGCTCTGAAAGTGAGGGGCATCAGGCCTTCGGCAGCTTCTCAAACTTAAGCAGCAGCTGCTTGTaGATCACCTTGATCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SVGSESEGHQAFGSFSNLSSSCL*ITLILF Trigger: AAACAAGATCAAGGTGATGCACAAGCAGCTGCTGCT...TAAGTTTGAGAAGCTGCCGAAGGCCTGATGCCCCTCACTTTCAGAGCCAACGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR GCA 90 bp | AGCTGCAGGACACTTTCATACTTGCGCTTCGTCTCACGCAGCAACTCAATCTGCGTGCATAGTAAAGTCTaGTCCAGCCCATCGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SCRTLSYLRFVSRSNSICVHSKV*SSPSSS Trigger: TGAAGACGATGGGCTGGAGCAGACTTTACTATGCAC...GCAGATTGAGTTGCTGCGTGAGACGAAGCGCAAGTATGAAAGTGTCCTGCAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157028.2 |
||
| CDS-3UTR TCA 90 bp | CATTGGCCTTTCTTCCTCAGCTGTTCGCTACTTACTTTTCAGATCTCAGCTTTTCCAGGAACTTCAGCTTaGTGGCCACATCTCCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: HWPFFLSCSLLTFQISAFPGTSA*WPHLPA Trigger: TGCGGGGAGATGTGGCCATCAAGCTGAAGTTCCTGG...AAAAGCTGAGATCTGAAAAGTAAGTAGCGAACAGCTGAGGAAGAAAGGCCAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131446.8 |
||
| CDS-3UTR CCA 90 bp | CTAGTTTCATTGAGGTTGGGTCCTGACACCATCACCTGCTGGAGGTCCTATAGGTCAGGAACACAGGGATaGATGAAACATTTTGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LVSLRLGPDTITCWRSYRSGTQG*MKHFGD Trigger: GTCCCCAAAATGTTTCATCCATCCCTGTGTTCCTGA...CCTATAGGACCTCCAGCAGGTGATGGTGTCAGGACCCAACCTCAATGAAACTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000157028.2 |
||
| CDS-3UTR GCA 90 bp | GAGTGTGTCTTCCATGGTCTTGGTGACCAGTGTGTTGATGCTAGAGACAAAGAAGGACACTTTCATACTTaGGCTTCGTCTCACGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ECVFHGLGDQCVDARDKEGHFHT*ASSHAA Trigger: TGCTGCGTGAGACGAAGCGCAAGTATGAAAGTGTCC...TTCTTTGTCTCTAGCATCAACACACTGGTCACCAAGACCATGGAAGACACACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209870.2 |
||
| CDS-3UTR CCA 90 bp | TTGGCCAGGGAGTGTTTTGTCATAGCCTTTGGCTGTGGAGTGAAAGGAAAAGATGCTTCGCCATTTCCGTaGATGGGAATCTCCATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LARECFVIAFGCGVKGKDASPFP*MGISIV Trigger: CACAATGGAGATTCCCATCCACGGAAATGGCGAAGC...ATCTTTTCCTTTCACTCCACAGCCAAAGGCTATGACAAAACACTCCCTGGCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033171.15 ENSMUST00000084782.10 ENSMUST00000131446.8 ENSMUST00000137931.8 |
||
| CDS-3UTR CCA 90 bp | CTGAATTCTTATTCAGACTTTATGAGCATTGGCCTTTCTTCCTCAGCTGTTCGCTTCCTCCTGAAGCTCTaGGGACTTCTGGCTGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LNSYSDFMSIGLSSSAVRFLLKL*GLLAEV Trigger: GACCTCAGCCAGAAGTCCCCAGAGCTTCAGGAGGAA...GCGAACAGCTGAGGAAGAAAGGCCAATGCTCATAAAGTCTGAATAAGAATTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131446.8 |
||
| CDS-3UTR CCA 90 bp | CATTGGCCTTTCTTCCTCAGCTGTTCGCTACTTACTTTTCAGATCTCAGCTTTTGTCTGGAAAGTGGCCTaGGCACTCTCAAGTCGACCA | + |
|
Preference number: 4 (lower is better) Translates to: HWPFFLSCSLLTFQISAFVWKVA*ALSSRP Trigger: TGGTCGACTTGAGAGTGCCCAGGCCACTTTCCAGAC...AAAAGCTGAGATCTGAAAAGTAAGTAGCGAACAGCTGAGGAAGAAAGGCCAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131446.8 |
||
| CDS-3UTR CCA 90 bp | CTAGTTTCATTGAGGTTGGGTCCTGACACCATCACCTGCTGGAGGTCCTATAGGATGGATGAAACATTTTaGGGACGGAGACAGTGCATA | + |
|
Preference number: 4 (lower is better) Translates to: LVSLRLGPDTITCWRSYRMDETF*GRRQCI Trigger: TATGCACTGTCTCCGTCCCCAAAATGTTTCATCCAT...CCTATAGGACCTCCAGCAGGTGATGGTGTCAGGACCCAACCTCAATGAAACTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157028.2 |
||
| CDS-3UTR TCA 90 bp | TTGGCCAGGGAGTGTTTTGTCATAGCCTTTGGCTGTGGAGTGAAAGGAAAAGATTTGATGTTGAACTGCTaGAGAGTCTGCTCCAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LARECFVIAFGCGVKGKDLMLNC*RVCSSC Trigger: ACAGCTGGAGCAGACTCTTCAGCAGTTCAACATCAA...ATCTTTTCCTTTCACTCCACAGCCAAAGGCTATGACAAAACACTCCCTGGCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR CCA 90 bp | AGTCCCCCACAAATTGACCTCACTGGGCCTGCTTTTATGAAAGGTTTATTCCTATGGGAATCTCCATTGTaGCTGCCTTCCCTAGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: SPPQIDLTGPAFMKGLFLWESPL*LPSLES Trigger: GGATTCTAGGGAAGGCAGCCACAATGGAGATTCCCA...TAGGAATAAACCTTTCATAAAAGCAGGCCCAGTGAGGTCAATTTGTGGGGGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR CCA 90 bp | CCTGCTTTTATGAAAGGTTTATTCCTAGTGCTAGAACCCAGTCTTCTGGGGTTCGCTTCGCCATTTCCGTaGATGGGAATCTCCATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PAFMKGLFLVLEPSLLGFASPFP*MGISIV Trigger: CACAATGGAGATTCCCATCCACGGAAATGGCGAAGC...GAACCCCAGAAGACTGGGTTCTAGCACTAGGAATAAACCTTTCATAAAAGCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| 3UTR CAA 72 bp | TACTGTTTGACAGTCATGAGTGTGTCTTCCATGGTCTaGGTGACCAGTGTGTTGATGCTAGAGACAAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YCLTVMSVSSMV*VTSVLMLETKK Trigger: CTTCTTTGTCTCTAGCATCAACACACTGGTCACCAAGACCATGGAAGACACACTCATGACTGTCAAACAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033171.15 ENSMUST00000137931.8 ENSMUST00000209870.2 |
||
| CDS-3UTR TCA 90 bp | AGACCTCTAAGAGGTTTCTTAGTTCCATTTCTCCAAAGATCAAGTCTGCCTCTTTTGATGTTGAACTGCTaGAGAGTCTGCTCCAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RPLRGFLVPFLQRSSLPLLMLNC*RVCSSC Trigger: ACAGCTGGAGCAGACTCTTCAGCAGTTCAACATCAA...AAGAGGCAGACTTGATCTTTGGAGAAATGGAACTAAGAAACCTCTTAGAGGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131446.8 |
||
| 3UTR CAA 72 bp | GTTTGGGCTCTGCTTTCAGGTTCTGTCTCCAACCATTaGAAGATTCAATGCCCTTACAACAAAAATCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VWALLSGSVSNH*KIQCPYNKNPQ Trigger: CTGAGGATTTTTGTTGTAAGGGCATTGAATCTTCAAATGGTTGGAGACAGAACCTGAAAGCAGAGCCCAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131446.8 |
||
| CDS-3UTR CAA 90 bp | GCAAAGGACATCCCATGTCCAATCTCCTCCACCCTGGGGCTGCCCCGCCCAGTGAGGACACTTTCATACTaGCGCTTCGTCTCACGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AKDIPCPISSTLGLPRPVRTLSY*RFVSRS Trigger: GCTGCGTGAGACGAAGCGCAAGTATGAAAGTGTCCT...CACTGGGCGGGGCAGCCCCAGGGTGGAGGAGATTGGACATGGGATGTCCTTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR CAA 90 bp | CTTCTGGGCCTACGGGCCTACGGGCCTCTTCAGACCACAGCAGTGGGCAAAACTTCCAGGAACTTCAGCTaGATGGCCACATCTCCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LLGLRAYGPLQTTAVGKTSRNFS*MATSPR Trigger: GCGGGGAGATGTGGCCATCAAGCTGAAGTTCCTGGA...AGTTTTGCCCACTGCTGTGGTCTGAAGAGGCCCGTAGGCCCGTAGGCCCAGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR CAA 90 bp | CTGGGGCTGCCCCGCCCAGTGTCCTTCTTGATAGCCAAGTTGGGCTGGGAGCTGCTAGTTTCATTGAGGTaGGGTCCTGACACCATCACC | + |
|
Preference number: 5 (lower is better) Translates to: LGLPRPVSFLIAKLGWELLVSLR*GPDTIT Trigger: GGTGATGGTGTCAGGACCCAACCTCAATGAAACTAG...CAGCTCCCAGCCCAACTTGGCTATCAAGAAGGACACTGGGCGGGGCAGCCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033171.15 ENSMUST00000084782.10 ENSMUST00000131446.8 ENSMUST00000137931.8 |
||
| CDS-3UTR CAA 90 bp | GAAAGTGGCCTGGGCACTCTCAAGTCGACCACGAGTCCCTGCATCCCGGGGCCCCTTGCACAGCAGCTTTaGTGTCTCTGCATTATAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ESGLGTLKSTTSPCIPGPLAQQL*CLCIIA Trigger: GGCTATAATGCAGAGACACAAAAGCTGCTGTGCAAG...GGGCCCCGGGATGCAGGGACTCGTGGTCGACTTGAGAGTGCCCAGGCCACTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137931.8 |
||
| CDS-3UTR CAA 90 bp | CAGCTTCTGGGCCTACGGGCCTACGGGCCTCTTCAGACCACAGCAGTGGGCAAAAGCGTCTCCCCATTCTaGCACAGCAGCTTTTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: QLLGLRAYGPLQTTAVGKSVSPF*HSSFCV Trigger: GACACAAAAGCTGCTGTGCAAGAATGGGGAGACGCT...TTTGCCCACTGCTGTGGTCTGAAGAGGCCCGTAGGCCCGTAGGCCCAGAAGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 ENSMUST00000137931.8 |
||
| CDS-3UTR CAA 90 bp | CAAAGGACATCCCATGTCCAATCTCCTCCACCCTGGGGCTGCCCCGCCCAGTGTAGCGTCTCCCCATTCTaGCACAGCAGCTTTTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: QRTSHVQSPPPWGCPAQCSVSPF*HSSFCV Trigger: GACACAAAAGCTGCTGTGCAAGAATGGGGAGACGCT...ACACTGGGCGGGGCAGCCCCAGGGTGGAGGAGATTGGACATGGGATGTCCTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 ENSMUST00000137931.8 |
||
| CDS GCA 90 bp | ATCACCTGCTGGAGGTCCTGCTCCAGCCCATCGTCTTCAGGAAGCTaGCCAGCTTCGCCATTTCCGTGGATGGGAATCTCCATTGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ITCWRSCSSPSSSGS*PASPFPWMGISIVA Trigger: AGCCACAATGGAGATTCCCATCCACGGAAATGGCGAAGCTGGGCAGCTTCCTGAAGACGATGGGCTGGAGCAGGACCTCCAGCAGGTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033171.15 ENSMUST00000084782.10 ENSMUST00000131446.8 ENSMUST00000133519.8 ENSMUST00000137931.8 ENSMUST00000210911.2 |
||
| CDS CCA 90 bp | GCCCATCGTCTTCAGGAAGCTGCCCAGCTTCGCCATTTCCGTGGATaGGAATCTCCATTGTGGCTGCCTTCCCTAGAATCCCGTCCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: AHRLQEAAQLRHFRG*ESPLWLPSLESRPS Trigger: TGACGGACGGGATTCTAGGGAAGGCAGCCACAATGGAGATTCCCATCCACGGAAATGGCGAAGCTGGGCAGCTTCCTGAAGACGATGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000033171.15 ENSMUST00000084782.10 ENSMUST00000131446.8 ENSMUST00000133519.8 ENSMUST00000137931.8 ENSMUST00000157028.2 ENSMUST00000209550.2 ENSMUST00000210911.2 |
||
| CDS CCA 90 bp | TCCAGCCCATCGTCTTCAGGAAGCTGCCCAGCTTCGCCATTTCCGTaGATGGGAATCTCCATTGTGGCTGCCTTCCCTAGAATCCCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSPSSSGSCPASPFP*MGISIVAAFPRIPS Trigger: GGACGGGATTCTAGGGAAGGCAGCCACAATGGAGATTCCCATCCACGGAAATGGCGAAGCTGGGCAGCTTCCTGAAGACGATGGGCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000033171.15 ENSMUST00000084782.10 ENSMUST00000131446.8 ENSMUST00000133519.8 ENSMUST00000137931.8 ENSMUST00000157028.2 ENSMUST00000209550.2 ENSMUST00000210911.2 |
||
| CDS-3UTR CAA 90 bp | CTGGGGCTGCCCCGCCCAGTGTCCTTCTTGATAGCCAAGTTGGGCTGGGAGCTGACAATGCTAGTTTCATaGAGGTTGGGTCCTGACACC | + |
|
Preference number: 5 (lower is better) Translates to: LGLPRPVSFLIAKLGWELTMLVS*RLGPDT Trigger: GGTGTCAGGACCCAACCTCAATGAAACTAGCATTGT...CAGCTCCCAGCCCAACTTGGCTATCAAGAAGGACACTGGGCGGGGCAGCCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033171.15 ENSMUST00000084782.10 ENSMUST00000131446.8 ENSMUST00000137931.8 |
||
| CDS-3UTR CAA 90 bp | TGGGCACTCTCAAGTCGACCACGAGTCCCTGCATCCCGGGGCCCTAGGCTCAGCGTGCACTTATATGTGTaGATGCCCCATTTCTTGACG | + |
|
Preference number: 5 (lower is better) Translates to: WALSSRPRVPASRGPRLSVHLYV*MPHFLT Trigger: CGTCAAGAAATGGGGCATCAACACATATAAGTGCAC...GCTGAGCCTAGGGCCCCGGGATGCAGGGACTCGTGGTCGACTTGAGAGTGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000137931.8 ENSMUST00000209870.2 |
||
| CDS-3UTR CAA 90 bp | CTGGGGCTGCCCCGCCCAGTGTCCTTCTTGATAGCCAAGTTGGGCTGGGAGCTGCTTGCACAGCAGCTTTaGTGTCTCTGCATTATAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LGLPRPVSFLIAKLGWELLAQQL*CLCIIA Trigger: GGCTATAATGCAGAGACACAAAAGCTGCTGTGCAAG...CAGCTCCCAGCCCAACTTGGCTATCAAGAAGGACACTGGGCGGGGCAGCCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 ENSMUST00000137931.8 |
||
| CDS-3UTR CAA 90 bp | CAGCTTCTGGGCCTACGGGCCTACGGGCCTCTTCAGACCACAGCAGTGGGCAAAGTGTCTTCCATGGTCTaGGTGACCAGTGTGTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: QLLGLRAYGPLQTTAVGKVSSMV*VTSVLM Trigger: CATCAACACACTGGTCACCAAGACCATGGAAGACAC...TTTGCCCACTGCTGTGGTCTGAAGAGGCCCGTAGGCCCGTAGGCCCAGAAGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR CAA 90 bp | AAGCACAGTTCAACTGGGTGGGTGGATGAGGGGAGGGCCCATTCAGATGCAGGGGGATGGGAATCTCCATaGTGGCTGCCTTCCCTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: KHSSTGWVDEGRAHSDAGGWESP*WLPSLE Trigger: TTCTAGGGAAGGCAGCCACAATGGAGATTCCCATCC...CCCTGCATCTGAATGGGCCCTCCCCTCATCCACCCACCCAGTTGAACTGTGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033171.15 ENSMUST00000084782.10 ENSMUST00000131446.8 ENSMUST00000137931.8 |
||
| CDS-3UTR CAA 90 bp | AGCTCCAGATCCACAGTCCGGGAGCCTCGGCCAAATCTCTCTGATAACAGCTGCGGATGGGAATCTCCATaGTGGCTGCCTTCCCTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SSRSTVREPRPNLSDNSCGWESP*WLPSLE Trigger: TTCTAGGGAAGGCAGCCACAATGGAGATTCCCATCC...GCAGCTGTTATCAGAGAGATTTGGCCGAGGCTCCCGGACTGTGGATCTGGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033171.15 ENSMUST00000157028.2 |
||
| CDS-3UTR CAA 90 bp | CACAGTTCAACTGGGTGGGTGGATGAGGGGAGGGCCCATTCAGATGCAGGGCCAACAATGCTAGTTTCATaGAGGTTGGGTCCTGACACC | + |
|
Preference number: 5 (lower is better) Translates to: HSSTGWVDEGRAHSDAGPTMLVS*RLGPDT Trigger: GGTGTCAGGACCCAACCTCAATGAAACTAGCATTGT...TGGCCCTGCATCTGAATGGGCCCTCCCCTCATCCACCCACCCAGTTGAACTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033171.15 ENSMUST00000084782.10 ENSMUST00000131446.8 ENSMUST00000137931.8 |
||
| CDS-3UTR CAA 90 bp | GTAAGTGGCAAAGGACATCCCATGTCCAATCTCCTCCACCCTGGGGCTGCCCCGCTTGCACAGCAGCTTTaGTGTCTCTGCATTATAGCC | + |
|
Preference number: 5 (lower is better) Translates to: VSGKGHPMSNLLHPGAAPLAQQL*CLCIIA Trigger: GGCTATAATGCAGAGACACAAAAGCTGCTGTGCAAG...CGGGGCAGCCCCAGGGTGGAGGAGATTGGACATGGGATGTCCTTTGCCACTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 ENSMUST00000137931.8 |
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| CDS GCA 90 bp | ATAGCCAAATTCCTCTTGCGCTTCGTCTCACGCAGCAACTCAATCTaGAGCTCTAGCTCCAGATCCACAGTCCGGGAGCCTCGGCCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: IAKFLLRFVSRSNSI*SSSSRSTVREPRPN Trigger: ATTTGGCCGAGGCTCCCGGACTGTGGATCTGGAGCTAGAGCTGCAGATTGAGTTGCTGCGTGAGACGAAGCGCAAGAGGAATTTGGCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137931.8 |
||
| CDS-3UTR CAA 90 bp | GCAAAGGACATCCCATGTCCAATCTCCTCCACCCTGGGGCTGCCCCGCCCAGTGTTGATGCCCCATTTCTaGACGATGTCAAACTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: AKDIPCPISSTLGLPRPVLMPHF*TMSNFS Trigger: AGAAAAGTTTGACATCGTCAAGAAATGGGGCATCAA...CACTGGGCGGGGCAGCCCCAGGGTGGAGGAGATTGGACATGGGATGTCCTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 ENSMUST00000137931.8 |
||
| CDS-3UTR CAA 90 bp | ACAGTTCAACTGGGTGGGTGGATGAGGGGAGGGCCCATTCAGATGCAGGGCCACTTGGTGACCAGTGTGTaGATGCTAGAGACAAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TVQLGGWMRGGPIQMQGHLVTSV*MLETKK Trigger: CTTCTTTGTCTCTAGCATCAACACACTGGTCACCAA...GTGGCCCTGCATCTGAATGGGCCCTCCCCTCATCCACCCACCCAGTTGAACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
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| CDS-3UTR CAA 90 bp | CTTCTGGGCCTACGGGCCTACGGGCCTCTTCAGACCACAGCAGTGGGCAAAACTTTGGTGACCAGTGTGTaGATGCTAGAGACAAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LLGLRAYGPLQTTAVGKTLVTSV*MLETKK Trigger: CTTCTTTGTCTCTAGCATCAACACACTGGTCACCAA...AGTTTTGCCCACTGCTGTGGTCTGAAGAGGCCCGTAGGCCCGTAGGCCCAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR CAA 90 bp | ACAGTTCAACTGGGTGGGTGGATGAGGGGAGGGCCCATTCAGATGCAGGGCCACTGCTTGTGCATCACCTaGATCTTGTTTTCTTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TVQLGGWMRGGPIQMQGHCLCIT*ILFSSR Trigger: CCTGGAAGAAAACAAGATCAAGGTGATGCACAAGCA...GTGGCCCTGCATCTGAATGGGCCCTCCCCTCATCCACCCACCCAGTTGAACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS GCA 90 bp | ACAGTGCATAGTAAAGTCTGCTCCAGCCCATCGTCTTCAGGAAGCTaGCCAGCTTCGCCATTTCCGTGGATGGGAATCTCCATTGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TVHSKVCSSPSSSGS*PASPFPWMGISIVA Trigger: AGCCACAATGGAGATTCCCATCCACGGAAATGGCGAAGCTGGGCAGCTTCCTGAAGACGATGGGCTGGAGCAGACTTTACTATGCACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157028.2 |
||
| CDS-3UTR CAA 90 bp | TTCAGCTTGATGGCCACATCTCCCCGCAGCTTCTCATATTTGTCCCGATGGGTCGGATGGGAATCTCCATaGTGGCTGCCTTCCCTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: FSLMATSPRSFSYLSRWVGWESP*WLPSLE Trigger: TTCTAGGGAAGGCAGCCACAATGGAGATTCCCATCC...GACCCATCGGGACAAATATGAGAAGCTGCGGGGAGATGTGGCCATCAAGCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033171.15 ENSMUST00000137931.8 |
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| CDS-3UTR CAA 90 bp | ACGAGCCCAAGCCAGCAAGTAAGTGGCAAAGGACATCCCATGTCCAATCTCCTCGGATGGGAATCTCCATaGTGGCTGCCTTCCCTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: TSPSQQVSGKGHPMSNLLGWESP*WLPSLE Trigger: TTCTAGGGAAGGCAGCCACAATGGAGATTCCCATCC...GAGGAGATTGGACATGGGATGTCCTTTGCCACTTACTTGCTGGCTTGGGCTCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033171.15 ENSMUST00000084782.10 ENSMUST00000131446.8 ENSMUST00000137931.8 |
||
| CDS-3UTR CAA 90 bp | CTGAAGAGTCTGCTCCAGCTGTTTCTGGTTCCCAGCGAAGTAGGCAGACACGGCACAATGCTAGTTTCATaGAGGTTGGGTCCTGACACC | + |
|
Preference number: 5 (lower is better) Translates to: LKSLLQLFLVPSEVGRHGTMLVS*RLGPDT Trigger: GGTGTCAGGACCCAACCTCAATGAAACTAGCATTGT...GCCGTGTCTGCCTACTTCGCTGGGAACCAGAAACAGCTGGAGCAGACTCTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033171.15 ENSMUST00000137931.8 |
||
| CDS-3UTR CAA 90 bp | AAGCCAGCAAGTAAGTGGCAAAGGACATCCCATGTCCAATCTCCTCCACCCTGGAGGACACTTTCATACTaGCGCTTCGTCTCACGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KPASKWQRTSHVQSPPPWRTLSY*RFVSRS Trigger: GCTGCGTGAGACGAAGCGCAAGTATGAAAGTGTCCT...CCAGGGTGGAGGAGATTGGACATGGGATGTCCTTTGCCACTTACTTGCTGGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
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| CDS-3UTR CAA 90 bp | AGAACCCAGTCTTCTGGGGTTCTAAGCACAGTTCAACTGGGTGGGTGGATGAGGAGCGTCTCCCCATTCTaGCACAGCAGCTTTTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RTQSSGVLSTVQLGGWMRSVSPF*HSSFCV Trigger: GACACAAAAGCTGCTGTGCAAGAATGGGGAGACGCT...CCTCATCCACCCACCCAGTTGAACTGTGCTTAGAACCCCAGAAGACTGGGTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
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| CDS-3UTR CAA 90 bp | CTTCTGGGCCTACGGGCCTACGGGCCTCTTCAGACCACAGCAGTGGGCAAAACTTGCATCACCTTGATCTaGTTTTCTTCCAGGAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLGLRAYGPLQTTAVGKTCITLI*FSSRNF Trigger: GAAGTTCCTGGAAGAAAACAAGATCAAGGTGATGCA...AGTTTTGCCCACTGCTGTGGTCTGAAGAGGCCCGTAGGCCCGTAGGCCCAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
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| CDS-3UTR CAA 90 bp | AGAACCCAGTCTTCTGGGGTTCTAAGCACAGTTCAACTGGGTGGGTGGATGAGGCTAGTTTCATTGAGGTaGGGTCCTGACACCATCACC | + |
|
Preference number: 5 (lower is better) Translates to: RTQSSGVLSTVQLGGWMRLVSLR*GPDTIT Trigger: GGTGATGGTGTCAGGACCCAACCTCAATGAAACTAG...CCTCATCCACCCACCCAGTTGAACTGTGCTTAGAACCCCAGAAGACTGGGTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033171.15 ENSMUST00000084782.10 ENSMUST00000131446.8 |
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| CDS-3UTR CAA 90 bp | AGCGTTGGCTCTGAAAGTGAGGGGCATCAGGCCTTCGGCAGCTTCTCAAACTTACTAGTTTCATTGAGGTaGGGTCCTGACACCATCACC | + |
|
Preference number: 5 (lower is better) Translates to: SVGSESEGHQAFGSFSNLLVSLR*GPDTIT Trigger: GGTGATGGTGTCAGGACCCAACCTCAATGAAACTAG...TAAGTTTGAGAAGCTGCCGAAGGCCTGATGCCCCTCACTTTCAGAGCCAACGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
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| CDS-3UTR CAA 90 bp | TCCAGGAACTTCAGCTTGATGGCCACATCTCCCCGCAGCTTCTCATATTTGTCCAGGACACTTTCATACTaGCGCTTCGTCTCACGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SRNFSLMATSPRSFSYLSRTLSY*RFVSRS Trigger: GCTGCGTGAGACGAAGCGCAAGTATGAAAGTGTCCT...GGACAAATATGAGAAGCTGCGGGGAGATGTGGCCATCAAGCTGAAGTTCCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209870.2 |
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| CDS-3UTR CAA 90 bp | AGTGCTAGAACCCAGTCTTCTGGGGTTCTAAGCACAGTTCAACTGGGTGGGTGGCGCAGCTTCTCATATTaGTCCCGATGGGTCTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SARTQSSGVLSTVQLGGWRSFSY*SRWVWK Trigger: TTTCCAGACCCATCGGGACAAATATGAGAAGCTGCG...CCACCCACCCAGTTGAACTGTGCTTAGAACCCCAGAAGACTGGGTTCTAGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
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| CDS-3UTR CAA 90 bp | CCAGCAAGTAAGTGGCAAAGGACATCCCATGTCCAATCTCCTCCACCCTGGGGCTGCTTGTGCATCACCTaGATCTTGTTTTCTTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PASKWQRTSHVQSPPPWGCLCIT*ILFSSR Trigger: CCTGGAAGAAAACAAGATCAAGGTGATGCACAAGCA...GCCCCAGGGTGGAGGAGATTGGACATGGGATGTCCTTTGCCACTTACTTGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
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| CDS-3UTR CAA 90 bp | CTGCAGGACACTTTCATACTTGCGCTTCGTCTCACGCAGCAACTCAATCTGCAGCTAGTTTCATTGAGGTaGGGTCCTGACACCATCACC | + |
|
Preference number: 5 (lower is better) Translates to: LQDTFILALRLTQQLNLQLVSLR*GPDTIT Trigger: GGTGATGGTGTCAGGACCCAACCTCAATGAAACTAG...CTGCAGATTGAGTTGCTGCGTGAGACGAAGCGCAAGTATGAAAGTGTCCTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033171.15 |
||
| CDS-3UTR CAA 90 bp | GATCTGGGAATGAAGCCCAGTGGCCAGGAAGATAAAGGGCAGGACAGCAGCTTCGTGCACTTATATGTGTaGATGCCCCATTTCTTGACG | + |
|
Preference number: 5 (lower is better) Translates to: DLGMKPSGQEDKGQDSSFVHLYV*MPHFLT Trigger: CGTCAAGAAATGGGGCATCAACACATATAAGTGCAC...GAAGCTGCTGTCCTGCCCTTTATCTTCCTGGCCACTGGGCTTCATTCCCAGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 ENSMUST00000137931.8 |
||
| CDS-3UTR CAA 90 bp | TCAACAAGAGCAGTGCAGGTTGCAGCAGGTGCGGTGAGAATGCCTTTATCTCTGGTGTCTTCCATGGTCTaGGTGACCAGTGTGTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: STRAVQVAAGAVRMPLSLVSSMV*VTSVLM Trigger: CATCAACACACTGGTCACCAAGACCATGGAAGACAC...CAGAGATAAAGGCATTCTCACCGCACCTGCTGCAACCTGCACTGCTCTTGTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131446.8 |
||
| CDS-3UTR CAA 90 bp | AAGCCAGCAAGTAAGTGGCAAAGGACATCCCATGTCCAATCTCCTCCACCCTGGGCAGCCTCATACTGTTaGACAGTCATGAGTGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: KPASKWQRTSHVQSPPPWAASYC*TVMSVS Trigger: AGACACACTCATGACTGTCAAACAGTATGAGGCTGC...CCAGGGTGGAGGAGATTGGACATGGGATGTCCTTTGCCACTTACTTGCTGGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR CAA 90 bp | GGCCAGGGAGTGTTTTGTCATAGCCTTTGGCTGTGGAGTGAAAGGAAAAGATCTGGATGGGAATCTCCATaGTGGCTGCCTTCCCTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GQGVFCHSLWLWSERKRSGWESP*WLPSLE Trigger: TTCTAGGGAAGGCAGCCACAATGGAGATTCCCATCC...AGATCTTTTCCTTTCACTCCACAGCCAAAGGCTATGACAAAACACTCCCTGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033171.15 ENSMUST00000084782.10 ENSMUST00000131446.8 ENSMUST00000137931.8 |
||
| CDS-3UTR CAA 90 bp | AAGCCAGCAAGTAAGTGGCAAAGGACATCCCATGTCCAATCTCCTCCACCCTGGGTGCACTTATATGTGTaGATGCCCCATTTCTTGACG | + |
|
Preference number: 5 (lower is better) Translates to: KPASKWQRTSHVQSPPPWVHLYV*MPHFLT Trigger: CGTCAAGAAATGGGGCATCAACACATATAAGTGCAC...CCAGGGTGGAGGAGATTGGACATGGGATGTCCTTTGCCACTTACTTGCTGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 ENSMUST00000137931.8 |
||
| CDS-3UTR CAA 90 bp | AGTCCCCCACAAATTGACCTCACTGGGCCTGCTTTTATGAAAGGTTTATTCCTATCCAGGAACTTCAGCTaGATGGCCACATCTCCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SPPQIDLTGPAFMKGLFLSRNFS*MATSPR Trigger: GCGGGGAGATGTGGCCATCAAGCTGAAGTTCCTGGA...TAGGAATAAACCTTTCATAAAAGCAGGCCCAGTGAGGTCAATTTGTGGGGGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR CAA 90 bp | GAGCTGGGGATAGGCCTGAGGAGTGATGCCATTGGCCAGGGAGTGTTTTGTCATTGCATCACCTTGATCTaGTTTTCTTCCAGGAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: ELGIGLRSDAIGQGVFCHCITLI*FSSRNF Trigger: GAAGTTCCTGGAAGAAAACAAGATCAAGGTGATGCA...ATGACAAAACACTCCCTGGCCAATGGCATCACTCCTCAGGCCTATCCCCAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR CAA 90 bp | GGGGCATCAGGCCTTCGGCAGCTTCTCAAACTTAGCTGCAGCTCTTCTGAATTCTTGATGCCCCATTTCTaGACGATGTCAAACTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GASGLRQLLKLSCSSSEFLMPHF*TMSNFS Trigger: AGAAAAGTTTGACATCGTCAAGAAATGGGGCATCAA...GAATTCAGAAGAGCTGCAGCTAAGTTTGAGAAGCTGCCGAAGGCCTGATGCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR CAA 90 bp | TTGGCCAGGGAGTGTTTTGTCATAGCCTTTGGCTGTGGAGTGAAAGGAAAAGATCGCAGCTTCTCATATTaGTCCCGATGGGTCTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LARECFVIAFGCGVKGKDRSFSY*SRWVWK Trigger: TTTCCAGACCCATCGGGACAAATATGAGAAGCTGCG...ATCTTTTCCTTTCACTCCACAGCCAAAGGCTATGACAAAACACTCCCTGGCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR CAA 90 bp | AGTCCCCCACAAATTGACCTCACTGGGCCTGCTTTTATGAAAGGTTTATTCCTAAAGAGCAGCAGCTGCTaGTGCATCACCTTGATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SPPQIDLTGPAFMKGLFLKSSSC*CITLIL Trigger: CAAGATCAAGGTGATGCACAAGCAGCTGCTGCTCTT...TAGGAATAAACCTTTCATAAAAGCAGGCCCAGTGAGGTCAATTTGTGGGGGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR CAA 90 bp | TTGGCCAGGGAGTGTTTTGTCATAGCCTTTGGCTGTGGAGTGAAAGGAAAAGATGTGCACTTATATGTGTaGATGCCCCATTTCTTGACG | + |
|
Preference number: 5 (lower is better) Translates to: LARECFVIAFGCGVKGKDVHLYV*MPHFLT Trigger: CGTCAAGAAATGGGGCATCAACACATATAAGTGCAC...ATCTTTTCCTTTCACTCCACAGCCAAAGGCTATGACAAAACACTCCCTGGCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 ENSMUST00000137931.8 |
||
| CDS-3UTR CAA 90 bp | AGTCCCCCACAAATTGACCTCACTGGGCCTGCTTTTATGAAAGGTTTATTCCTAGCAGCCTCATACTGTTaGACAGTCATGAGTGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SPPQIDLTGPAFMKGLFLAASYC*TVMSVS Trigger: AGACACACTCATGACTGTCAAACAGTATGAGGCTGC...TAGGAATAAACCTTTCATAAAAGCAGGCCCAGTGAGGTCAATTTGTGGGGGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
||
| CDS-3UTR CAA 90 bp | CTGAATTCTTATTCAGACTTTATGAGCATTGGCCTTTCTTCCTCAGCTGTTCGCACAATGCTAGTTTCATaGAGGTTGGGTCCTGACACC | + |
|
Preference number: 5 (lower is better) Translates to: LNSYSDFMSIGLSSSAVRTMLVS*RLGPDT Trigger: GGTGTCAGGACCCAACCTCAATGAAACTAGCATTGT...GCGAACAGCTGAGGAAGAAAGGCCAATGCTCATAAAGTCTGAATAAGAATTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131446.8 |
||
| CDS-3UTR CAA 90 bp | TTTTATGAAAGGTTTATTCCTAGTGCTAGAACCCAGTCTTCTGGGGTTCTAAGCAAGAGCAGCAGCTGCTaGTGCATCACCTTGATCTTG | + |
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Preference number: 5 (lower is better) Translates to: FYERFIPSARTQSSGVLSKSSSC*CITLIL Trigger: CAAGATCAAGGTGATGCACAAGCAGCTGCTGCTCTT...GCTTAGAACCCCAGAAGACTGGGTTCTAGCACTAGGAATAAACCTTTCATAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
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| CDS-3UTR CAA 90 bp | AGTCCCCCACAAATTGACCTCACTGGGCCTGCTTTTATGAAAGGTTTATTCCTATTGATGCCCCATTTCTaGACGATGTCAAACTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: SPPQIDLTGPAFMKGLFLLMPHF*TMSNFS Trigger: AGAAAAGTTTGACATCGTCAAGAAATGGGGCATCAA...TAGGAATAAACCTTTCATAAAAGCAGGCCCAGTGAGGTCAATTTGTGGGGGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000084782.10 ENSMUST00000131446.8 |
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| CDS GCA 72 bp | TTCCTCTTGCGCTTCGTCTCACGCAGCAACTCAATCTaGAGCTCTAGCTCCAGATCCACAGTCCGGGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: FLLRFVSRSNSI*SSSSRSTVREP Trigger: AGGCTCCCGGACTGTGGATCTGGAGCTAGAGCTGCAGATTGAGTTGCTGCGTGAGACGAAGCGCAAGAGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137931.8 |
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| CDS CCA 72 bp | CTTCAGGAAGCTGCCCAGCTTCGCCATTTCCGTGGATaGGAATCTCCATTGTGGCTGCCTTCCCTAGAATCC | + |
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Preference number: 6 (lower is better) Translates to: LQEAAQLRHFRG*ESPLWLPSLES Trigger: GGATTCTAGGGAAGGCAGCCACAATGGAGATTCCCATCCACGGAAATGGCGAAGCTGGGCAGCTTCCTGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000033171.15 ENSMUST00000084782.10 ENSMUST00000131446.8 ENSMUST00000133519.8 ENSMUST00000137931.8 ENSMUST00000157028.2 ENSMUST00000209550.2 ENSMUST00000210911.2 |
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| CDS CCA 72 bp | TCGTCTTCAGGAAGCTGCCCAGCTTCGCCATTTCCGTaGATGGGAATCTCCATTGTGGCTGCCTTCCCTAGA | + |
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Preference number: 6 (lower is better) Translates to: SSSGSCPASPFP*MGISIVAAFPR Trigger: TCTAGGGAAGGCAGCCACAATGGAGATTCCCATCCACGGAAATGGCGAAGCTGGGCAGCTTCCTGAAGACGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000033171.15 ENSMUST00000084782.10 ENSMUST00000131446.8 ENSMUST00000133519.8 ENSMUST00000137931.8 ENSMUST00000157028.2 ENSMUST00000209550.2 ENSMUST00000210911.2 |
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| CDS GCA 72 bp | ACAGGGATGGATGAAACATTTTGGGGACGGAGACAGTaGATAGTAAAGTCTGCTCCAGCCCATCGTCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: TGMDETFWGRRQ*IVKSAPAHRLQ Trigger: CTGAAGACGATGGGCTGGAGCAGACTTTACTATGCACTGTCTCCGTCCCCAAAATGTTTCATCCATCCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000157028.2 |
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