Pregenerated sensors for AQR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040383Ensembl transcript IDs: ENSMUST00000043160.13, ENSMUST00000102543.5
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGCAACCTCGACTACAGTGAAAGCCACAATGGGCTGGGCCATCCGTaGCCAACCACCGAACACTACGCCACCATACTCAGACTGCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: GNLDYSESHNGLGHP*PTTEHYATILRLPG Trigger: CCCTGGCAGTCTGAGTATGGTGGCGTAGTGTTCGGTGGTTGGGCACGGATGGCCCAGCCCATTGTGGCTTTCACTGTAGTCGAGGTTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
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| CDS CCA 90 bp | GTCAGGCTGAGCGGCTGGGGTCTCTTGACTCAGGCTGGCATCCGCTaGACTGGGTGTGAGGTTACCTTGAGCAGACACGGTTTCTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: VRLSGWGLLTQAGIR*TGCEVTLSRHGFFF Trigger: GAAGAAGAAACCGTGTCTGCTCAAGGTAACCTCACACCCAGTCCAGCGGATGCCAGCCTGAGTCAAGAGACCCCAGCCGCTCAGCCTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043160.13 |
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| CDS GCA 90 bp | CGTCCGGGGCAGCGTCCGGGCAGGCAGTCCCCGAGTTCTTCACTCTaGTCATGTATTCTTCCCAGCGGGACATCACCTGATATAAGAAGA | + |
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Preference number: 5 (lower is better) Translates to: RPGQRPGRQSPSSSL*SCILPSGTSPDIRR Trigger: TCTTCTTATATCAGGTGATGTCCCGCTGGGAAGAATACATGAGCAGAGTGAAGAACTCGGGGACTGCCTGCCCGGACGCTGCCCCGGACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
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| CDS TCA 90 bp | TTGGCCAGTTTTCACCGATGTTGGGTTTGGCAACCTCGACTACAGTaGAAGCCACAATGGGCTGGGCCATCCGTGCCCAACCACCGAACA | + |
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Preference number: 5 (lower is better) Translates to: LASFHRCWVWQPRLQ*KPQWAGPSVPNHRT Trigger: TGTTCGGTGGTTGGGCACGGATGGCCCAGCCCATTGTGGCTTTCACTGTAGTCGAGGTTGCCAAACCCAACATCGGTGAAAACTGGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
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| CDS GCA 90 bp | CACACTCCGAGCATGATCCAGTGTCTGCAGCTCTGGCAAGAGAAGTaGCGGAGAAGGAAGAGCCTTTCTGGAGGTTGGGAAGGGTTCTGT | + |
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Preference number: 5 (lower is better) Translates to: HTPSMIQCLQLWQEK*RRRKSLSGGWEGFC Trigger: ACAGAACCCTTCCCAACCTCCAGAAAGGCTCTTCCTTCTCCGGCACTTCTCTTGCCAGAGCTGCAGACACTGGATCATGCTCGGAGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102543.5 |
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| CDS CCA 90 bp | ATGTTGGGTTTGGCAACCTCGACTACAGTGAAAGCCACAATGGGCTaGGCCATCCGTGCCCAACCACCGAACACTACGCCACCATACTCA | + |
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Preference number: 5 (lower is better) Translates to: MLGLATSTTVKATMG*AIRAQPPNTTPPYS Trigger: TGAGTATGGTGGCGTAGTGTTCGGTGGTTGGGCACGGATGGCCCAGCCCATTGTGGCTTTCACTGTAGTCGAGGTTGCCAAACCCAACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
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| CDS GCA 90 bp | GGAAGAGCCTTTCTGGAGGTTGGGAAGGGTTCTGTTGGAATGATATaGAAATGCAGTGGGCGGGCAGTGAGCTGGCTGAAAGCAGGAGTC | + |
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Preference number: 5 (lower is better) Translates to: GRAFLEVGKGSVGMI*KCSGRAVSWLKAGV Trigger: GACTCCTGCTTTCAGCCAGCTCACTGCCCGCCCACTGCATTTGCATATCATTCCAACAGAACCCTTCCCAACCTCCAGAAAGGCTCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102543.5 |
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| CDS CCA 90 bp | AGTTCTGGAAGAGGGACACTCGAGCGAAGATGTAAAGGCCAAGCCTaGCTCTTGACATGGCTACCACCAAGCGACGCACATCCCTCAGAT | + |
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Preference number: 5 (lower is better) Translates to: SSGRGTLERRCKGQA*LLTWLPPSDAHPSD Trigger: ATCTGAGGGATGTGCGTCGCTTGGTGGTAGCCATGTCAAGAGCCAGGCTTGGCCTTTACATCTTCGCTCGAGTGTCCCTCTTCCAGAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
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| CDS CCA 90 bp | TGCCGGAGAAGGAAGAGCCTTTCTGGAGGTTGGGAAGGGTTCTGTTaGAATGATATGCAAATGCAGTGGGCGGGCAGTGAGCTGGCTGAA | + |
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Preference number: 5 (lower is better) Translates to: CRRRKSLSGGWEGFC*NDMQMQWAGSELAE Trigger: TTCAGCCAGCTCACTGCCCGCCCACTGCATTTGCATATCATTCCAACAGAACCCTTCCCAACCTCCAGAAAGGCTCTTCCTTCTCCGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102543.5 |
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| CDS CCA 90 bp | CTCTGGCAAGAGAAGTGCCGGAGAAGGAAGAGCCTTTCTGGAGGTTaGGAAGGGTTCTGTTGGAATGATATGCAAATGCAGTGGGCGGGC | + |
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Preference number: 5 (lower is better) Translates to: LWQEKCRRRKSLSGG*EGFCWNDMQMQWAG Trigger: GCCCGCCCACTGCATTTGCATATCATTCCAACAGAACCCTTCCCAACCTCCAGAAAGGCTCTTCCTTCTCCGGCACTTCTCTTGCCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102543.5 |
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| CDS TCA 90 bp | GTCCAGGCTGCATTCCGGCCCGGATGGCCTCTATCTGTGTATGAGTaGACTGGATTGTATTACGTTTGGGCTGGTTGTAAGGATAAGGGC | + |
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Preference number: 5 (lower is better) Translates to: VQAAFRPGWPLSVYE*TGLYYVWAGCKDKG Trigger: GCCCTTATCCTTACAACCAGCCCAAACGTAATACAATCCAGTTCACTCATACACAGATAGAGGCCATCCGGGCCGGAATGCAGCCTGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
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| CDS GCA 90 bp | TCTCCATTCTTTCTGGAGGTTGGGAAGGGTTCTGTTGGAATGATATaGAAATGCAGTGGGCGGGCAGTGAGCTGGCTGAAAGCAGGAGTC | + |
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Preference number: 5 (lower is better) Translates to: SPFFLEVGKGSVGMI*KCSGRAVSWLKAGV Trigger: GACTCCTGCTTTCAGCCAGCTCACTGCCCGCCCACTGCATTTGCATATCATTCCAACAGAACCCTTCCCAACCTCCAGAAAGAATGGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043160.13 |
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| CDS CCA 90 bp | AAAGCTGGGAAAACAGATGGCCGTCCTCTTCTCTGTGAACAAGACTaGAGAGGTAGCAGTGAACCAGAAGGTGGGAGTCATCCAGGATGG | + |
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Preference number: 5 (lower is better) Translates to: KAGKTDGRPLLCEQD*RGSSEPEGGSHPGW Trigger: CCATCCTGGATGACTCCCACCTTCTGGTTCACTGCTACCTCTCCAGTCTTGTTCACAGAGAAGAGGACGGCCATCTGTTTTCCCAGCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
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| CDS CCA 90 bp | TCAGGTCCGTCTTCGATGACTCGCCCTTTGTCATCCAGCATGCCCTaGATTTCACAGCCTCTGACGTACACCAGACCAACTTGCTCAATA | + |
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Preference number: 5 (lower is better) Translates to: SGPSSMTRPLSSSMP*ISQPLTYTRPTCSI Trigger: TATTGAGCAAGTTGGTCTGGTGTACGTCAGAGGCTGTGAAATCCAGGGCATGCTGGATGACAAAGGGCGAGTCATCGAAGACGGACCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
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| CDS CCA 90 bp | GGTTCTGTTGGAATGATATGCAAATGCAGTGGGCGGGCAGTGAGCTaGCTGAAAGCAGGAGTCAGTTCAAAGCAGTTCTGGAAGAGGGAC | + |
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Preference number: 5 (lower is better) Translates to: GSVGMICKCSGRAVS*LKAGVSSKQFWKRD Trigger: GTCCCTCTTCCAGAACTGCTTTGAACTGACTCCTGCTTTCAGCCAGCTCACTGCCCGCCCACTGCATTTGCATATCATTCCAACAGAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
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| CDS CCA 90 bp | AGGTGGTCTCTCTCCATTCTTTCTGGAGGTTGGGAAGGGTTCTGTTaGAATGATATGCAAATGCAGTGGGCGGGCAGTGAGCTGGCTGAA | + |
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Preference number: 5 (lower is better) Translates to: RWSLSILSGGWEGFC*NDMQMQWAGSELAE Trigger: TTCAGCCAGCTCACTGCCCGCCCACTGCATTTGCATATCATTCCAACAGAACCCTTCCCAACCTCCAGAAAGAATGGAGAGAGACCACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043160.13 |
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| CDS GCA 90 bp | CTCATCCTTGATGTGGTCTCTGACATTCAGATTGATGGTGACATCTaGACGAACTCGGGTTGGCCAGTTTTCACCGATGTTGGGTTTGGC | + |
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Preference number: 5 (lower is better) Translates to: LILDVVSDIQIDGDI*TNSGWPVFTDVGFG Trigger: GCCAAACCCAACATCGGTGAAAACTGGCCAACCCGAGTTCGTGCAGATGTCACCATCAATCTGAATGTCAGAGACCACATCAAGGATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
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| CDS CCA 90 bp | GTCTCTGACATTCAGATTGATGGTGACATCTGCACGAACTCGGGTTaGCCAGTTTTCACCGATGTTGGGTTTGGCAACCTCGACTACAGT | + |
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Preference number: 5 (lower is better) Translates to: VSDIQIDGDICTNSG*PVFTDVGFGNLDYS Trigger: ACTGTAGTCGAGGTTGCCAAACCCAACATCGGTGAAAACTGGCCAACCCGAGTTCGTGCAGATGTCACCATCAATCTGAATGTCAGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
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| CDS TCA 90 bp | ACAAAGTTCGCCATCTGGGGCATGTTCTTAATTACCTGCACTTCATaGGGTGGTCTCTCTCCATTCTTTCTGGAGGTTGGGAAGGGTTCT | + |
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Preference number: 5 (lower is better) Translates to: TKFAIWGMFLITCTS*GGLSPFFLEVGKGS Trigger: AGAACCCTTCCCAACCTCCAGAAAGAATGGAGAGAGACCACCTCATGAAGTGCAGGTAATTAAGAACATGCCCCAGATGGCGAACTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043160.13 |
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| CDS GCA 90 bp | CAGTTGGATACAAAGGCATCTGATTCAGTTGCTGAATTTGAGAGATaGGGCGTTCGTGGCGAGACACCAGCAATTCTAGAAGAAACTCTT | + |
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Preference number: 5 (lower is better) Translates to: QLDTKASDSVAEFER*GVRGETPAILEETL Trigger: AAGAGTTTCTTCTAGAATTGCTGGTGTCTCGCCACGAACGCCGCATCTCTCAAATTCAGCAACTGAATCAGATGCCTTTGTATCCAACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
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| CDS CCA 90 bp | CTGGAATCTGTCAACTGTTGTCACTTTGTTTGGCCTTCCAATCAGTaGATTATTCCCACAGCGCCTATTGATGATGTCCCGAATCAGATG | + |
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Preference number: 5 (lower is better) Translates to: LESVNCCHFVWPSNQ*IIPTAPIDDVPNQM Trigger: CATCTGATTCGGGACATCATCAATAGGCGCTGTGGGAATAATCCACTGATTGGAAGGCCAAACAAAGTGACAACAGTTGACAGATTCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
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| CDS CCA 90 bp | ATCGTTCTGCTGACCCTGGAATCTGTCAACTGTTGTCACTTTGTTTaGCCTTCCAATCAGTGGATTATTCCCACAGCGCCTATTGATGAT | + |
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Preference number: 5 (lower is better) Translates to: IVLLTLESVNCCHFV*PSNQWIIPTAPIDD Trigger: ATCATCAATAGGCGCTGTGGGAATAATCCACTGATTGGAAGGCCAAACAAAGTGACAACAGTTGACAGATTCCAGGGTCAGCAGAACGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
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| CDS TCA 90 bp | ATCCTGTTGATACTGGTTTGGATCCAAAAATACTCGAAATGTCCTTaGCTCTCCTCTAAGATTGGGTCTGGGTTCAGGTCCGTCTTCGAT | + |
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Preference number: 5 (lower is better) Translates to: ILLILVWIQKYSKCP*LSSKIGSGFRSVFD Trigger: ATCGAAGACGGACCTGAACCCAGACCCAATCTTAGAGGAGAGTCAAGGACATTTCGAGTATTTTTGGATCCAAACCAGTATCAACAGGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
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| CDS CCA 90 bp | CTGCTCCATGTTGGAATACTTCTGAAAGGCCATGTTCTTAATGACTaGAGGCAATTGGTGGTGATCGCCAATCATAATCCACCGTTTCAA | + |
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Preference number: 5 (lower is better) Translates to: LLHVGILLKGHVLND*RQLVVIANHNPPFQ Trigger: TTGAAACGGTGGATTATGATTGGCGATCACCACCAATTGCCTCCAGTCATTAAGAACATGGCCTTTCAGAAGTATTCCAACATGGAGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
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| CDS TCA 90 bp | TACTTGAAACCCAACTTGACCAAGTCGTGTCGTTTCAAGGCAGCATaGGTACATGTCATAGCGATGATTTTGGCTTCTTTTACCAAGAGG | + |
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Preference number: 5 (lower is better) Translates to: YLKPNLTKSCRFKAA*VHVIAMILASFTKR Trigger: CCTCTTGGTAAAAGAAGCCAAAATCATCGCTATGACATGTACTCATGCTGCCTTGAAACGACACGACTTGGTCAAGTTGGGTTTCAAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
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| CDS TCA 90 bp | GGATTCTGCAGAAGTAGAGGGATAAAGGTTTCGATCTCCAGAATCTaGGCAGCCTCTTCCATTAAAATGTTGTCATACTTGAAACCCAAC | + |
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Preference number: 5 (lower is better) Translates to: GFCRSRGIKVSISRI*AASSIKMLSYLKPN Trigger: GTTGGGTTTCAAGTATGACAACATTTTAATGGAAGAGGCTGCTCAGATTCTGGAGATCGAAACCTTTATCCCTCTACTTCTGCAGAATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
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| CDS TCA 90 bp | TACACATCTTCGGCTCCGTTTTGTATCGTATTGGTCATATCCTGTTaGTACTGGTTTGGATCCAAAAATACTCGAAATGTCCTTGACTCT | + |
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Preference number: 5 (lower is better) Translates to: YTSSAPFCIVLVISC*YWFGSKNTRNVLDS Trigger: AGAGTCAAGGACATTTCGAGTATTTTTGGATCCAAACCAGTATCAACAGGATATGACCAATACGATACAAAACGGAGCCGAAGATGTGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
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| CDS CCA 90 bp | ACTTCTCATTCACCATACAGCAGATGGACATTAAATAGGCCTTGCTaGAAACTTCCGGAGAATAATTCATCCAAAGATAATTTTCAAGGT | + |
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Preference number: 5 (lower is better) Translates to: TSHSPYSRWTLNRPC*KLPENNSSKDNFQG Trigger: ACCTTGAAAATTATCTTTGGATGAATTATTCTCCGGAAGTTTCCAGCAAGGCCTATTTAATGTCCATCTGCTGTATGGTGAATGAGAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
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| CDS CAA 72 bp | CTGACTGGAGCAGTCAGGCTGAGCGGCTGGGGTCTCTaGACTCAGGCTGGCATCCGCTGGACTGGGTGTGAG | + |
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Preference number: 6 (lower is better) Translates to: LTGAVRLSGWGL*TQAGIRWTGCE Trigger: CTCACACCCAGTCCAGCGGATGCCAGCCTGAGTCAAGAGACCCCAGCCGCTCAGCCTGACTGCTCCAGTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043160.13 |
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| CDS TCA 72 bp | GCTGGAAGTCATACAGCAGGCCCGCGTTGGCTGTGCTaGACTCTGGCAGGAGCTGCACATGGGGCAAATTCC | + |
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Preference number: 6 (lower is better) Translates to: AGSHTAGPRWLC*TLAGAAHGANS Trigger: GGAATTTGCCCCATGTGCAGCTCCTGCCAGAGTTCAGCACAGCCAACGCGGGCCTGCTGTATGACTTCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
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| CDS CCA 72 bp | CAATGTCACACGGGGCAGAGGTGTCTTCTGTCTGACTaGAGCAGTCAGGCTGAGCGGCTGGGGTCTCTTGAC | + |
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Preference number: 6 (lower is better) Translates to: QCHTGQRCLLSD*SSQAERLGSLD Trigger: GTCAAGAGACCCCAGCCGCTCAGCCTGACTGCTCCAGTCAGACAGAAGACACCTCTGCCCCGTGTGACATTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043160.13 |
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| CDS CCA 72 bp | CTACTCGGTCTCTGTGGGGACAGACTCTGCATCTTGTaGGGTGGCAGCTTCTGCTGCTGCAGAGACAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: LLGLCGDRLCIL*GGSFCCCRDRL Trigger: GAGCCTGTCTCTGCAGCAGCAGAAGCTGCCACCCCACAAGATGCAGAGTCTGTCCCCACAGAGACCGAGTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043160.13 |
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| CDS CCA 72 bp | TTGGCAACCTCGACTACAGTGAAAGCCACAATGGGCTaGGCCATCCGTGCCCAACCACCGAACACTACGCCA | + |
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Preference number: 6 (lower is better) Translates to: LATSTTVKATMG*AIRAQPPNTTP Trigger: TGGCGTAGTGTTCGGTGGTTGGGCACGGATGGCCCAGCCCATTGTGGCTTTCACTGTAGTCGAGGTTGCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
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| CDS CAA 72 bp | ACGTTGATGAGCTGGAAGTCATACAGCAGGCCCGCGTaGGCTGTGCTGAACTCTGGCAGGAGCTGCACATGG | + |
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Preference number: 6 (lower is better) Translates to: TLMSWKSYSRPA*AVLNSGRSCTW Trigger: CCATGTGCAGCTCCTGCCAGAGTTCAGCACAGCCAACGCGGGCCTGCTGTATGACTTCCAGCTCATCAACGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
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| CDS GCA 72 bp | GACTACAGTGAAAGCCACAATGGGCTGGGCCATCCGTaGCCAACCACCGAACACTACGCCACCATACTCAGA | + |
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Preference number: 6 (lower is better) Translates to: DYSESHNGLGHP*PTTEHYATILR Trigger: TCTGAGTATGGTGGCGTAGTGTTCGGTGGTTGGGCACGGATGGCCCAGCCCATTGTGGCTTTCACTGTAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
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| CDS CAA 72 bp | GGTCTGGGTTCAGGTCCGTCTTCGATGACTCGCCCTTaGTCATCCAGCATGCCCTGGATTTCACAGCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: GLGSGPSSMTRP*SSSMPWISQPL Trigger: CAGAGGCTGTGAAATCCAGGGCATGCTGGATGACAAAGGGCGAGTCATCGAAGACGGACCTGAACCCAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
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| CDS CAA 90 bp | AAGTCTTCCACGTTGATGAGCTGGAAGTCATACAGCAGGCCCGCGTaGGCTGTGCTGAACTCTGGCAGGAGCTGCACATGGGGCAAATTC | + |
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Preference number: 6 (lower is better) Translates to: KSSTLMSWKSYSRPA*AVLNSGRSCTWGKF Trigger: GAATTTGCCCCATGTGCAGCTCCTGCCAGAGTTCAGCACAGCCAACGCGGGCCTGCTGTATGACTTCCAGCTCATCAACGTGGAAGACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
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| CDS TCA 72 bp | TTTCACCGATGTTGGGTTTGGCAACCTCGACTACAGTaGAAGCCACAATGGGCTGGGCCATCCGTGCCCAAC | + |
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Preference number: 6 (lower is better) Translates to: FHRCWVWQPRLQ*KPQWAGPSVPN Trigger: GTTGGGCACGGATGGCCCAGCCCATTGTGGCTTTCACTGTAGTCGAGGTTGCCAAACCCAACATCGGTGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
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| CDS GCA 72 bp | AGACTCTGCATCTTGTGGGGTGGCAGCTTCTGCTGCTaGAGAGACAGGCTCAGCTGCAGTAGCAATGTCACA | + |
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Preference number: 6 (lower is better) Translates to: RLCILWGGSFCC*RDRLSCSSNVT Trigger: TGTGACATTGCTACTGCAGCTGAGCCTGTCTCTGCAGCAGCAGAAGCTGCCACCCCACAAGATGCAGAGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043160.13 |
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| CDS TCA 72 bp | TCTCTTGACTCAGGCTGGCATCCGCTGGACTGGGTGTaGGGTTACCTTGAGCAGACACGGTTTCTTCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: SLDSGWHPLDWV*GYLEQTRFLLL Trigger: CAGAAGAAGAAACCGTGTCTGCTCAAGGTAACCTCACACCCAGTCCAGCGGATGCCAGCCTGAGTCAAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043160.13 |
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| CDS GCA 72 bp | GAGGTTGGGAAGGGTTCTGTTGGAATGATATGCAAATaGAGTGGGCGGGCAGTGAGCTGGCTGAAAGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: EVGKGSVGMICK*SGRAVSWLKAG Trigger: TCCTGCTTTCAGCCAGCTCACTGCCCGCCCACTGCATTTGCATATCATTCCAACAGAACCCTTCCCAACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
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| CDS GCA 72 bp | AGCATGATCCAGTGTCTGCAGCTCTGGCAAGAGAAGTaGCGGAGAAGGAAGAGCCTTTCTGGAGGTTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: SMIQCLQLWQEK*RRRKSLSGGWE Trigger: TTCCCAACCTCCAGAAAGGCTCTTCCTTCTCCGGCACTTCTCTTGCCAGAGCTGCAGACACTGGATCATGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102543.5 |
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| CDS CCA 72 bp | GATCTGGACTGCAACATCTGTTTTTCCTGTACCAGGTaGGCCCACAACCATGGTGAGTCCAGGCTGCATTCC | + |
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Preference number: 6 (lower is better) Translates to: DLDCNICFSCTR*AHNHGESRLHS Trigger: GGAATGCAGCCTGGACTCACCATGGTTGTGGGCCCACCTGGTACAGGAAAAACAGATGTTGCAGTCCAGATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
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| CDS CAA 72 bp | GTTGTAGAGGTTACACAAGCTTGCCCTGGCTCTCCCTaGAGCATCAAGGTCCACAGTAGGAACTCCAACCCG | + |
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Preference number: 6 (lower is better) Translates to: VVEVTQACPGSP*SIKVHSRNSNP Trigger: CGGGTTGGAGTTCCTACTGTGGACCTTGATGCTCAAGGGAGAGCCAGGGCAAGCTTGTGTAACCTCTACAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
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| CDS CAA 72 bp | CAGGCTGGCATCCGCTGGACTGGGTGTGAGGTTACCTaGAGCAGACACGGTTTCTTCTTCTGCTTCCATTTC | + |
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Preference number: 6 (lower is better) Translates to: QAGIRWTGCEVT*SRHGFFFCFHF Trigger: GAAATGGAAGCAGAAGAAGAAACCGTGTCTGCTCAAGGTAACCTCACACCCAGTCCAGCGGATGCCAGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043160.13 |
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| CDS CAA 90 bp | ATGGTGACATCTGCACGAACTCGGGTTGGCCAGTTTTCACCGATGTaGGGTTTGGCAACCTCGACTACAGTGAAAGCCACAATGGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: MVTSARTRVGQFSPM*GLATSTTVKATMGW Trigger: CCAGCCCATTGTGGCTTTCACTGTAGTCGAGGTTGCCAAACCCAACATCGGTGAAAACTGGCCAACCCGAGTTCGTGCAGATGTCACCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
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| CDS TCA 72 bp | AATAATGGGCACTACTTGGGTCCCCATAGCCCAAAATaGTGTCATGCAGCCAGTCCGGTACCACGCAGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: NNGHYLGPHSPK*CHAASPVPRSQ Trigger: CTGACTGCGTGGTACCGGACTGGCTGCATGACATCATTTTGGGCTATGGGGACCCAAGTAGTGCCCATTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS TCA 72 bp | GGCTGCATTCCGGCCCGGATGGCCTCTATCTGTGTATaGGTGAACTGGATTGTATTACGTTTGGGCTGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: GCIPARMASICV*VNWIVLRLGWL Trigger: CAACCAGCCCAAACGTAATACAATCCAGTTCACTCATACACAGATAGAGGCCATCCGGGCCGGAATGCAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS TCA 72 bp | AGGCTGGCATCCGCTGGACTGGGTGTGAGGTTACCTTaGGCAGACACGGTTTCTTCTTCTGCTTCCATTTCT | + |
|
Preference number: 6 (lower is better) Translates to: RLASAGLGVRLP*ADTVSSSASIS Trigger: AGAAATGGAAGCAGAAGAAGAAACCGTGTCTGCTCAAGGTAACCTCACACCCAGTCCAGCGGATGCCAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043160.13 |
||
| CDS GCA 72 bp | ATTGGAGAGGGCAAAGTCATAGAGCTCGGGGAAGTGTaGGAAGGCAGCCCTCTGCAGAGATGTAATTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: IGEGKVIELGEV*EGSPLQRCNSV Trigger: GACAGAATTACATCTCTGCAGAGGGCTGCCTTCGCACACTTCCCCGAGCTCTATGACTTTGCCCTCTCCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS CCA 72 bp | AGGAAGAGCCTTTCTGGAGGTTGGGAAGGGTTCTGTTaGAATGATATGCAAATGCAGTGGGCGGGCAGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: RKSLSGGWEGFC*NDMQMQWAGSE Trigger: CTCACTGCCCGCCCACTGCATTTGCATATCATTCCAACAGAACCCTTCCCAACCTCCAGAAAGGCTCTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102543.5 |
||
| CDS CAA 72 bp | TCTGCACGAACTCGGGTTGGCCAGTTTTCACCGATGTaGGGTTTGGCAACCTCGACTACAGTGAAAGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: SARTRVGQFSPM*GLATSTTVKAT Trigger: TGTGGCTTTCACTGTAGTCGAGGTTGCCAAACCCAACATCGGTGAAAACTGGCCAACCCGAGTTCGTGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS CAA 90 bp | CGAAGACCTTCCCACTCATCCTTGATGTGGTCTCTGACATTCAGATaGATGGTGACATCTGCACGAACTCGGGTTGGCCAGTTTTCACCG | + |
|
Preference number: 6 (lower is better) Translates to: RRPSHSSLMWSLTFR*MVTSARTRVGQFSP Trigger: CGGTGAAAACTGGCCAACCCGAGTTCGTGCAGATGTCACCATCAATCTGAATGTCAGAGACCACATCAAGGATGAGTGGGAAGGTCTTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS GCA 72 bp | TTTCTGGAGGTTGGGAAGGGTTCTGTTGGAATGATATaGAAATGCAGTGGGCGGGCAGTGAGCTGGCTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: FLEVGKGSVGMI*KCSGRAVSWLK Trigger: TTTCAGCCAGCTCACTGCCCGCCCACTGCATTTGCATATCATTCCAACAGAACCCTTCCCAACCTCCAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS CCA 72 bp | CTCTCCATTCTTTCTGGAGGTTGGGAAGGGTTCTGTTaGAATGATATGCAAATGCAGTGGGCGGGCAGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LSILSGGWEGFC*NDMQMQWAGSE Trigger: CTCACTGCCCGCCCACTGCATTTGCATATCATTCCAACAGAACCCTTCCCAACCTCCAGAAAGAATGGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043160.13 |
||
| CDS CAA 72 bp | TCCCACTCATCCTTGATGTGGTCTCTGACATTCAGATaGATGGTGACATCTGCACGAACTCGGGTTGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SHSSLMWSLTFR*MVTSARTRVGQ Trigger: CTGGCCAACCCGAGTTCGTGCAGATGTCACCATCAATCTGAATGTCAGAGACCACATCAAGGATGAGTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS CAA 90 bp | CAGCATGCCCTGGATTTCACAGCCTCTGACGTACACCAGACCAACTaGCTCAATAAAAGGTCTCCTCCTGTCAAACTTAGTGCCGTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: QHALDFTASDVHQTN*LNKRSPPVKLSAVR Trigger: CCTTACGGCACTAAGTTTGACAGGAGGAGACCTTTTATTGAGCAAGTTGGTCTGGTGTACGTCAGAGGCTGTGAAATCCAGGGCATGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS TCA 72 bp | CCCATCCACATCGGGAGCGAGATAAGCTGCTGCACCTaGCTCCTTATCAAGTCTACTTCCAAGCTATTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PIHIGSEISCCT*LLIKSTSKLLK Trigger: CTTCAATAGCTTGGAAGTAGACTTGATAAGGAGTCAGGTGCAGCAGCTTATCTCGCTCCCGATGTGGATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS TCA 72 bp | GCATTCCGGCCCGGATGGCCTCTATCTGTGTATGAGTaGACTGGATTGTATTACGTTTGGGCTGGTTGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: AFRPGWPLSVYE*TGLYYVWAGCK Trigger: CTTACAACCAGCCCAAACGTAATACAATCCAGTTCACTCATACACAGATAGAGGCCATCCGGGCCGGAATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS TCA 72 bp | TCTTGTCTGCAGGGTAACCAAGCAAGCACATGTACATaGAGAGCGCCACTACATACTCTGCCTCTCCAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SCLQGNQASTCT*RAPLHTLPLQG Trigger: ACCTTGGAGAGGCAGAGTATGTAGTGGCGCTCTTCATGTACATGTGCTTGCTTGGTTACCCTGCAGACAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS TCA 72 bp | GCCATCTGGGGCATGTTCTTAATTACCTGCACTTCATaGGGTGGTCTCTCTCCATTCTTTCTGGAGGTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: AIWGMFLITCTS*GGLSPFFLEVG Trigger: CCCAACCTCCAGAAAGAATGGAGAGAGACCACCTCATGAAGTGCAGGTAATTAAGAACATGCCCCAGATGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043160.13 |
||
| CDS CCA 72 bp | ATTCAGATTGATGGTGACATCTGCACGAACTCGGGTTaGCCAGTTTTCACCGATGTTGGGTTTGGCAACCTC | + |
|
Preference number: 6 (lower is better) Translates to: IQIDGDICTNSG*PVFTDVGFGNL Trigger: GAGGTTGCCAAACCCAACATCGGTGAAAACTGGCCAACCCGAGTTCGTGCAGATGTCACCATCAATCTGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS CCA 72 bp | GAGAAGTGCCGGAGAAGGAAGAGCCTTTCTGGAGGTTaGGAAGGGTTCTGTTGGAATGATATGCAAATGCAG | + |
|
Preference number: 6 (lower is better) Translates to: EKCRRRKSLSGG*EGFCWNDMQMQ Trigger: CTGCATTTGCATATCATTCCAACAGAACCCTTCCCAACCTCCAGAAAGGCTCTTCCTTCTCCGGCACTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102543.5 |
||
| CDS CAA 72 bp | GCTGACCCTGGAATCTGTCAACTGTTGTCACTTTGTTaGGCCTTCCAATCAGTGGATTATTCCCACAGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: ADPGICQLLSLC*AFQSVDYSHSA Trigger: GGCGCTGTGGGAATAATCCACTGATTGGAAGGCCAAACAAAGTGACAACAGTTGACAGATTCCAGGGTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS TCA 72 bp | CTCCTTATCAAGTCTACTTCCAAGCTATTGAAGCAGTaGTCCAGGAAAAGCAGGAGCAGTGTCTGCTCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LLIKSTSKLLKQ*SRKSRSSVCSW Trigger: CCACGAGCAGACACTGCTCCTGCTTTTCCTGGATCACTGCTTCAATAGCTTGGAAGTAGACTTGATAAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS TCA 72 bp | GACGCAGGAGATGGCGCTCATCAATGTCTAAAGCCATaGTTTTCTCAAACAGCTGGTTCAGAGCCTGATTGG | + |
|
Preference number: 6 (lower is better) Translates to: DAGDGAHQCLKP*FSQTAGSEPDW Trigger: CCAATCAGGCTCTGAACCAGCTGTTTGAGAAAATCATGGCTTTAGACATTGATGAGCGCCATCTCCTGCGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS GCA 72 bp | GATGTGGTCTCTGACATTCAGATTGATGGTGACATCTaGACGAACTCGGGTTGGCCAGTTTTCACCGATGTT | + |
|
Preference number: 6 (lower is better) Translates to: DVVSDIQIDGDI*TNSGWPVFTDV Trigger: AACATCGGTGAAAACTGGCCAACCCGAGTTCGTGCAGATGTCACCATCAATCTGAATGTCAGAGACCACATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS CCA 72 bp | CTGACCCTGGAATCTGTCAACTGTTGTCACTTTGTTTaGCCTTCCAATCAGTGGATTATTCCCACAGCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: LTLESVNCCHFV*PSNQWIIPTAP Trigger: AGGCGCTGTGGGAATAATCCACTGATTGGAAGGCCAAACAAAGTGACAACAGTTGACAGATTCCAGGGTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS CAA 72 bp | AGTTGGATACAAAGGCATCTGATTCAGTTGCTGAATTaGAGAGATGCGGCGTTCGTGGCGAGACACCAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: SWIQRHLIQLLN*RDAAFVARHQQ Trigger: TTGCTGGTGTCTCGCCACGAACGCCGCATCTCTCAAATTCAGCAACTGAATCAGATGCCTTTGTATCCAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS CAA 72 bp | GGCCTTCCAATCAGTGGATTATTCCCACAGCGCCTATaGATGATGTCCCGAATCAGATGCTTCTGTCCATTG | + |
|
Preference number: 6 (lower is better) Translates to: GLPISGLFPQRL*MMSRIRCFCPL Trigger: CAATGGACAGAAGCATCTGATTCGGGACATCATCAATAGGCGCTGTGGGAATAATCCACTGATTGGAAGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS CAA 90 bp | GTACATGTCATAGCGATGATTTTGGCTTCTTTTACCAAGAGGTATTaGGATCTGTCCAGTCCACTGCGAAGCAGCTCCGAGGCTCTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: VHVIAMILASFTKRY*DLSSPLRSSSEALN Trigger: GTTCAGAGCCTCGGAGCTGCTTCGCAGTGGACTGGACAGATCCAAATACCTCTTGGTAAAAGAAGCCAAAATCATCGCTATGACATGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS CAA 90 bp | TTTGGATCCAAAAATACTCGAAATGTCCTTGACTCTCCTCTAAGATaGGGTCTGGGTTCAGGTCCGTCTTCGATGACTCGCCCTTTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: FGSKNTRNVLDSPLR*GLGSGPSSMTRPLS Trigger: TGACAAAGGGCGAGTCATCGAAGACGGACCTGAACCCAGACCCAATCTTAGAGGAGAGTCAAGGACATTTCGAGTATTTTTGGATCCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS TCA 72 bp | GCACCTGACTCCTTATCAAGTCTACTTCCAAGCTATTaGAGCAGTGATCCAGGAAAAGCAGGAGCAGTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: APDSLSSLLPSY*SSDPGKAGAVS Trigger: AGACACTGCTCCTGCTTTTCCTGGATCACTGCTTCAATAGCTTGGAAGTAGACTTGATAAGGAGTCAGGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS TCA 72 bp | GGGGGATTTGGAGTGCTGGGTCACTCACAGTCACTTTaGCATTATGACCAGGAAAGCTGGCCTTTAAATGTT | + |
|
Preference number: 6 (lower is better) Translates to: GGFGVLGHSQSL*HYDQESWPLNV Trigger: AACATTTAAAGGCCAGCTTTCCTGGTCATAATGTCAAAGTGACTGTGAGTGACCCAGCACTCCAAATCCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS GCA 72 bp | ACAAAGGCATCTGATTCAGTTGCTGAATTTGAGAGATaGGGCGTTCGTGGCGAGACACCAGCAATTCTAGAA | + |
|
Preference number: 6 (lower is better) Translates to: TKASDSVAEFER*GVRGETPAILE Trigger: TTCTAGAATTGCTGGTGTCTCGCCACGAACGCCGCATCTCTCAAATTCAGCAACTGAATCAGATGCCTTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS CCA 72 bp | TCGTGCTTTCGAAGACCTTCCCACTCATCCTTGATGTaGTCTCTGACATTCAGATTGATGGTGACATCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SCFRRPSHSSLM*SLTFRLMVTSA Trigger: TGCAGATGTCACCATCAATCTGAATGTCAGAGACCACATCAAGGATGAGTGGGAAGGTCTTCGAAAGCACGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS CCA 72 bp | GTCAACTGTTGTCACTTTGTTTGGCCTTCCAATCAGTaGATTATTCCCACAGCGCCTATTGATGATGTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: VNCCHFVWPSNQ*IIPTAPIDDVP Trigger: CGGGACATCATCAATAGGCGCTGTGGGAATAATCCACTGATTGGAAGGCCAAACAAAGTGACAACAGTTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS CAA 72 bp | AAAAATACTCGAAATGTCCTTGACTCTCCTCTAAGATaGGGTCTGGGTTCAGGTCCGTCTTCGATGACTCGC | + |
|
Preference number: 6 (lower is better) Translates to: KNTRNVLDSPLR*GLGSGPSSMTR Trigger: GCGAGTCATCGAAGACGGACCTGAACCCAGACCCAATCTTAGAGGAGAGTCAAGGACATTTCGAGTATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS CAA 72 bp | ATAGCGATGATTTTGGCTTCTTTTACCAAGAGGTATTaGGATCTGTCCAGTCCACTGCGAAGCAGCTCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: IAMILASFTKRY*DLSSPLRSSSE Trigger: CTCGGAGCTGCTTCGCAGTGGACTGGACAGATCCAAATACCTCTTGGTAAAAGAAGCCAAAATCATCGCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS TCA 72 bp | ATTGAAATCCAGGGTGGCAATCTGATTGGGCATTTTTaGATAATGGGCACTACTTGGGTCCCCATAGCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: IEIQGGNLIGHF*IMGTTWVPIAQ Trigger: TTGGGCTATGGGGACCCAAGTAGTGCCCATTATTCAAAAATGCCCAATCAGATTGCCACCCTGGATTTCAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS GCA 72 bp | TGGATTTCACAGCCTCTGACGTACACCAGACCAACTTaGTCAATAAAAGGTCTCCTCCTGTCAAACTTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: WISQPLTYTRPT*SIKGLLLSNLV Trigger: CACTAAGTTTGACAGGAGGAGACCTTTTATTGAGCAAGTTGGTCTGGTGTACGTCAGAGGCTGTGAAATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS CAA 72 bp | CTGGATTTCACAGCCTCTGACGTACACCAGACCAACTaGCTCAATAAAAGGTCTCCTCCTGTCAAACTTAGT | + |
|
Preference number: 6 (lower is better) Translates to: LDFTASDVHQTN*LNKRSPPVKLS Trigger: ACTAAGTTTGACAGGAGGAGACCTTTTATTGAGCAAGTTGGTCTGGTGTACGTCAGAGGCTGTGAAATCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS CAA 90 bp | ATCCCATATAATTTTCTCAGTTGGATACAAAGGCATCTGATTCAGTaGCTGAATTTGAGAGATGCGGCGTTCGTGGCGAGACACCAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: IPYNFLSWIQRHLIQ*LNLRDAAFVARHQQ Trigger: TTGCTGGTGTCTCGCCACGAACGCCGCATCTCTCAAATTCAGCAACTGAATCAGATGCCTTTGTATCCAACTGAGAAAATTATATGGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS CAA 90 bp | GTTGGAATACTTCTGAAAGGCCATGTTCTTAATGACTGGAGGCAATaGGTGGTGATCGCCAATCATAATCCACCGTTTCAATCGGCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: VGILLKGHVLNDWRQ*VVIANHNPPFQSAE Trigger: TTCAGCCGATTGAAACGGTGGATTATGATTGGCGATCACCACCAATTGCCTCCAGTCATTAAGAACATGGCCTTTCAGAAGTATTCCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS CAA 90 bp | AAAGGAGGATATAATCGTTCTGCTGACCCTGGAATCTGTCAACTGTaGTCACTTTGTTTGGCCTTCCAATCAGTGGATTATTCCCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: KGGYNRSADPGICQL*SLCLAFQSVDYSHS Trigger: GCTGTGGGAATAATCCACTGATTGGAAGGCCAAACAAAGTGACAACAGTTGACAGATTCCAGGGTCAGCAGAACGATTATATCCTCCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS TCA 72 bp | ATACTGGTTTGGATCCAAAAATACTCGAAATGTCCTTaGCTCTCCTCTAAGATTGGGTCTGGGTTCAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: ILVWIQKYSKCP*LSSKIGSGFRS Trigger: GGACCTGAACCCAGACCCAATCTTAGAGGAGAGTCAAGGACATTTCGAGTATTTTTGGATCCAAACCAGTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS TCA 72 bp | CCCAACTTGACCAAGTCGTGTCGTTTCAAGGCAGCATaGGTACATGTCATAGCGATGATTTTGGCTTCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: PNLTKSCRFKAA*VHVIAMILASF Trigger: AAAAGAAGCCAAAATCATCGCTATGACATGTACTCATGCTGCCTTGAAACGACACGACTTGGTCAAGTTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS TCA 72 bp | ATCATAATCCACCGTTTCAATCGGCTGAATCCGTCTTaGGGATTCTGCAGAAGTAGAGGGATAAAGGTTTCG | + |
|
Preference number: 6 (lower is better) Translates to: IIIHRFNRLNPS*GFCRSRGIKVS Trigger: CGAAACCTTTATCCCTCTACTTCTGCAGAATCCTCAAGACGGATTCAGCCGATTGAAACGGTGGATTATGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS TCA 72 bp | CGAGTGAAAAGAGACTGCTCCATGTTGGAATACTTCTaGAAGGCCATGTTCTTAATGACTGGAGGCAATTGG | + |
|
Preference number: 6 (lower is better) Translates to: RVKRDCSMLEYF*KAMFLMTGGNW Trigger: CCAATTGCCTCCAGTCATTAAGAACATGGCCTTTCAGAAGTATTCCAACATGGAGCAGTCTCTTTTCACTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS CAA 72 bp | CTTCTGAAAGGCCATGTTCTTAATGACTGGAGGCAATaGGTGGTGATCGCCAATCATAATCCACCGTTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: LLKGHVLNDWRQ*VVIANHNPPFQ Trigger: TTGAAACGGTGGATTATGATTGGCGATCACCACCAATTGCCTCCAGTCATTAAGAACATGGCCTTTCAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS TCA 72 bp | TCAGATGCTTCTGTCCATTGTAGGTTGTTAGAATACTaGTCTTGTCTGCAGGGTAACCAAGCAAGCACATGT | + |
|
Preference number: 6 (lower is better) Translates to: SDASVHCRLLEY*SCLQGNQASTC Trigger: ACATGTGCTTGCTTGGTTACCCTGCAGACAAGATCAGTATTCTAACAACCTACAATGGACAGAAGCATCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS TCA 72 bp | TTGAAATTTCCTAGATCTCTGGGACATTTCATCCAGTaGAAAGAGCAGAACAGTGAACTCTGCAGCTGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LKFPRSLGHFIQ*KEQNSELCSWK Trigger: CTTCCAGCTGCAGAGTTCACTGTTCTGCTCTTTTCACTGGATGAAATGTCCCAGAGATCTAGGAAATTTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102543.5 |
||
| CDS GCA 72 bp | TTTGTTGGACGCACAGTAATTAAAAAGCATACATCGTaGTTTCGAAGACCTTCCCACTCATCCTTGATGTGG | + |
|
Preference number: 6 (lower is better) Translates to: FVGRTVIKKHTS*FRRPSHSSLMW Trigger: CCACATCAAGGATGAGTGGGAAGGTCTTCGAAAGCACGATGTATGCTTTTTAATTACTGTGCGTCCAACAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS CCA 72 bp | GTTGGAATACTTCTGAAAGGCCATGTTCTTAATGACTaGAGGCAATTGGTGGTGATCGCCAATCATAATCCA | + |
|
Preference number: 6 (lower is better) Translates to: VGILLKGHVLND*RQLVVIANHNP Trigger: TGGATTATGATTGGCGATCACCACCAATTGCCTCCAGTCATTAAGAACATGGCCTTTCAGAAGTATTCCAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
||
| CDS CAA 90 bp | CCTCATTATGACATTGAAAGTGTCATACACATCTTCGGCTCCGTTTaGTATCGTATTGGTCATATCCTGTTGATACTGGTTTGGATCCAA | + |
|
Preference number: 6 (lower is better) Translates to: PHYDIESVIHIFGSV*YRIGHILLILVWIQ Trigger: TTGGATCCAAACCAGTATCAACAGGATATGACCAATACGATACAAAACGGAGCCGAAGATGTGTATGACACTTTCAATGTCATAATGAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
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| CDS TCA 72 bp | TCGGCTCCGTTTTGTATCGTATTGGTCATATCCTGTTaGTACTGGTTTGGATCCAAAAATACTCGAAATGTC | + |
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Preference number: 6 (lower is better) Translates to: SAPFCIVLVISC*YWFGSKNTRNV Trigger: GACATTTCGAGTATTTTTGGATCCAAACCAGTATCAACAGGATATGACCAATACGATACAAAACGGAGCCGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
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| CDS TCA 72 bp | AGAAGTAGAGGGATAAAGGTTTCGATCTCCAGAATCTaGGCAGCCTCTTCCATTAAAATGTTGTCATACTTG | + |
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Preference number: 6 (lower is better) Translates to: RSRGIKVSISRI*AASSIKMLSYL Trigger: CAAGTATGACAACATTTTAATGGAAGAGGCTGCTCAGATTCTGGAGATCGAAACCTTTATCCCTCTACTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
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| CDS GCA 72 bp | CATTCACCATACAGCAGATGGACATTAAATAGGCCTTaGTGGAAACTTCCGGAGAATAATTCATCCAAAGAT | + |
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Preference number: 6 (lower is better) Translates to: HSPYSRWTLNRP*WKLPENNSSKD Trigger: ATCTTTGGATGAATTATTCTCCGGAAGTTTCCAGCAAGGCCTATTTAATGTCCATCTGCTGTATGGTGAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
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| CDS CCA 72 bp | TGTCATACACATCTTCGGCTCCGTTTTGTATCGTATTaGTCATATCCTGTTGATACTGGTTTGGATCCAAAA | + |
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Preference number: 6 (lower is better) Translates to: CHTHLRLRFVSY*SYPVDTGLDPK Trigger: TTTTGGATCCAAACCAGTATCAACAGGATATGACCAATACGATACAAAACGGAGCCGAAGATGTGTATGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
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| CDS CAA 72 bp | GACATTGAAAGTGTCATACACATCTTCGGCTCCGTTTaGTATCGTATTGGTCATATCCTGTTGATACTGGTT | + |
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Preference number: 6 (lower is better) Translates to: DIESVIHIFGSV*YRIGHILLILV Trigger: AACCAGTATCAACAGGATATGACCAATACGATACAAAACGGAGCCGAAGATGTGTATGACACTTTCAATGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
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| CDS CAA 72 bp | TTTGTATCGTATTGGTCATATCCTGTTGATACTGGTTaGGATCCAAAAATACTCGAAATGTCCTTGACTCTC | + |
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Preference number: 6 (lower is better) Translates to: FVSYWSYPVDTG*DPKILEMSLTL Trigger: GAGAGTCAAGGACATTTCGAGTATTTTTGGATCCAAACCAGTATCAACAGGATATGACCAATACGATACAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043160.13 ENSMUST00000102543.5 |
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