RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for APC (Mus musculus)

Ensembl gene IDs: ENSMUSG00000005871

Ensembl transcript IDs: ENSMUST00000066133.7, ENSMUST00000079362.13, ENSMUST00000115781.10, ENSMUST00000163295.2, ENSMUST00000165590.2, ENSMUST00000171187.8

Found 944 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGTGTGTGGGAGGCAGAGCTTCTTCGTGCCGCACTCCTGTCGTCTaGCACACAATGGAACTCGGTGGTAGAAGCAGAACTTCTGTCGTC +
Preference number: 1 (lower is better)
Translates to: VCVGGRASSCRTPVV*HTMELGGRSRTSVV
Trigger: GACGACAGAAGTTCTGCTTCTACCACCGAGTTCCATTGTGTGGCAGACGACAGGAGTGCGGCACGAAGAAGCTCTGCCTCCCACACACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR CCA 90 bp GAGGCAGAGCTTCTTCGTGCCGCACTCCTGTCGTCTGCCACACAATaGAACTCGGTGGTAGAAGCAGAACTTCTGTCGTCCTGGGAGGTA +
Preference number: 1 (lower is better)
Translates to: EAELLRAALLSSATQ*NSVVEAELLSSWEV
Trigger: TACCTCCCAGGACGACAGAAGTTCTGCTTCTACCACCGAGTTCCATTGTGTGGCAGACGACAGGAGTGCGGCACGAAGAAGCTCTGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR CCA 90 bp TTGGGAATGACCCCATGGGGACAGGACTGCATTCTCCTGAACGGCTaGATACAGATCCTTCCCGACTTCCGTAGGAGCGAAGGGACATTT +
Preference number: 1 (lower is better)
Translates to: LGMTPWGQDCILLNG*IQILPDFRRSEGTF
Trigger: AAATGTCCCTTCGCTCCTACGGAAGTCGGGAAGGATCTGTATCCAGCCGTTCAGGAGAATGCAGTCCTGTCCCCATGGGGTCATTCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163295.2
3UTR CCA 90 bp GATAAGCCAGAAGCCTGGAGTCGGCTGGGTTTGGCTCTAGCATTCTaGGACACTGCTGGAACTTCAGTTGCAGGATCTTCAGCTGACCGA +
Preference number: 1 (lower is better)
Translates to: DKPEAWSRLGLALAF*DTAGTSVAGSSADR
Trigger: TCGGTCAGCTGAAGATCCTGCAACTGAAGTTCCAGCAGTGTCCCAGAATGCTAGAGCCAAACCCAGCCGACTCCAGGCTTCTGGCTTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR TCA 90 bp CTGGGGCTTATGATGCCACTCACCATTCCACTACATGGCTCACTCTaGACAGAGCTGGCAATGGAGCGACTCTCAAAACTGTCAAGGGAG +
Preference number: 1 (lower is better)
Translates to: LGLMMPLTIPLHGSL*TELAMERLSKLSRE
Trigger: CTCCCTTGACAGTTTTGAGAGTCGCTCCATTGCCAGCTCTGTTCAGAGTGAGCCATGTAGTGGAATGGTGAGTGGCATCATAAGCCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR TCA 90 bp TTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCCTGTGATGTaGACTGGGCCTTCAGGCTTTGAGGCATCACCTTTACCTACTGAC +
Preference number: 1 (lower is better)
Translates to: FRGLVLSFCHVHPVM*TGPSGFEASPLPTD
Trigger: GTCAGTAGGTAAAGGTGATGCCTCAAAGCCTGAAGGCCCAGTTCACATCACAGGATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR GCA 90 bp CATTTACAAATGTTCTTCTTGGGAATGACCCCATGGGGACAGGACTaGATTCTCCTGAACGGCTGGATACAGATCCTTCCCGACTTCCGT +
Preference number: 1 (lower is better)
Translates to: HLQMFFLGMTPWGQD*ILLNGWIQILPDFR
Trigger: ACGGAAGTCGGGAAGGATCTGTATCCAGCCGTTCAGGAGAATGCAGTCCTGTCCCCATGGGGTCATTCCCAAGAAGAACATTTGTAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163295.2
3UTR CCA 90 bp ACAGCTTTATTATGCCTGGTTGATTCTGAAGATAAGCCAGAAGCCTaGAGTCGGCTGGGTTTGGCTCTAGCATTCTGGGACACTGCTGGA +
Preference number: 1 (lower is better)
Translates to: TALLCLVDSEDKPEA*SRLGLALAFWDTAG
Trigger: TCCAGCAGTGTCCCAGAATGCTAGAGCCAAACCCAGCCGACTCCAGGCTTCTGGCTTATCTTCAGAATCAACCAGGCATAATAAAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR TCA 90 bp GGTGGTAGAAGCAGAACTTCTGTCGTCCTGGGAGGTATGAATGGCTaGTACTTCTTCCATAACTTTGGCTATCTGGGCTGCAGTGGTAGT +
Preference number: 1 (lower is better)
Translates to: GGRSRTSVVLGGMNG*YFFHNFGYLGCSGS
Trigger: ACTACCACTGCAGCCCAGATAGCCAAAGTTATGGAAGAAGTATCAGCCATTCATACCTCCCAGGACGACAGAAGTTCTGCTTCTACCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR TCA 90 bp TGGAACTCGGTGGTAGAAGCAGAACTTCTGTCGTCCTGGGAGGTATaGATGGCTGATACTTCTTCCATAACTTTGGCTATCTGGGCTGCA +
Preference number: 1 (lower is better)
Translates to: WNSVVEAELLSSWEV*MADTSSITLAIWAA
Trigger: TGCAGCCCAGATAGCCAAAGTTATGGAAGAAGTATCAGCCATTCATACCTCCCAGGACGACAGAAGTTCTGCTTCTACCACCGAGTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR GCA 90 bp CTGAATGTCCTCATGGACAACGTAAGAAGTCTGTGTGTGCACACATaGAAATGTGCCAAGACAGGCGAGTGGAGGTCAGAGGATGACTTT +
Preference number: 1 (lower is better)
Translates to: LNVLMDNVRSLCVHT*KCAKTGEWRSEDDF
Trigger: AAAGTCATCCTCTGACCTCCACTCGCCTGTCTTGGCACATTTGCATGTGTGCACACACAGACTTCTTACGTTGTCCATGAGGACATTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR CCA 90 bp AGGTTCTTGAGCATGCTCACTGCCCCCATGTCCCACAAGGCTTCCTaGTCTTTAGGATTTCTTGCTGAGAGATTCCACAAAGTTCCACAT +
Preference number: 1 (lower is better)
Translates to: RFLSMLTAPMSHKAS*SLGFLAERFHKVPH
Trigger: ATGTGGAACTTTGTGGAATCTCTCAGCAAGAAATCCTAAAGACCAGGAAGCCTTGTGGGACATGGGGGCAGTGAGCATGCTCAAGAACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR CCA 90 bp TTTGAATTTTCCGACTTAGTGAAGTTGTATGTGTTTGAGTGTGTGTaGGAGGCAGAGCTTCTTCGTGCCGCACTCCTGTCGTCTGCCACA +
Preference number: 1 (lower is better)
Translates to: FEFSDLVKLYVFECV*EAELLRAALLSSAT
Trigger: TGTGGCAGACGACAGGAGTGCGGCACGAAGAAGCTCTGCCTCCCACACACACTCAAACACATACAACTTCACTAAGTCGGAAAATTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR TCA 90 bp GACTTTGCAAGTAGTGCCTTTTTGAGTCTGGCCATTTCTTTGTGCTaGACTTGGACGCAGCTGATTCTGCCTTTTGGCATTAGATGGAGG +
Preference number: 1 (lower is better)
Translates to: DFASSAFLSLAISLC*TWTQLILPFGIRWR
Trigger: CCTCCATCTAATGCCAAAAGGCAGAATCAGCTGCGTCCAAGTTCAGCACAAAGAAATGGCCAGACTCAAAAAGGCACTACTTGCAAAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR TCA 90 bp AGCATTCTGGGACACTGCTGGAACTTCAGTTGCAGGATCTTCAGCTaGCCGAGTTACATCATTCTCTTTTACTTCTGCTGTCTGCAGAGT +
Preference number: 1 (lower is better)
Translates to: SILGHCWNFSCRIFS*PSYIILFYFCCLQS
Trigger: ACTCTGCAGACAGCAGAAGTAAAAGAGAATGATGTAACTCGGTCAGCTGAAGATCCTGCAACTGAAGTTCCAGCAGTGTCCCAGAATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR TCA 90 bp TGCCCCCATGTCCCACAAGGCTTCCTGGTCTTTAGGATTTCTTGCTaGGAGATTCCACAAAGTTCCACATGCATTACTGACTATTGTCAA +
Preference number: 1 (lower is better)
Translates to: CPHVPQGFLVFRISC*EIPQSSTCITDYCQ
Trigger: TTGACAATAGTCAGTAATGCATGTGGAACTTTGTGGAATCTCTCAGCAAGAAATCCTAAAGACCAGGAAGCCTTGTGGGACATGGGGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR TCA 90 bp GTTTTGATGAGGTTCCTGCATTTTCTGTTGTTGGATGGTAAGCACTaGGGCCAATACCTCGCTCTCTCTCCAAACTTCTGTCTTTCTCAG +
Preference number: 1 (lower is better)
Translates to: VLMRFLHFLLLDGKH*GQYLALSPNFCLSQ
Trigger: CTGAGAAAGACAGAAGTTTGGAGAGAGAGCGAGGTATTGGCCTCAGTGCTTACCATCCAACAACAGAAAATGCAGGAACCTCATCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR GCA 90 bp ACTTCTTCCATAACTTTGGCTATCTGGGCTGCAGTGGTAGTGATCTaGAGACCTCGTTTTGATGAGGTTCCTGCATTTTCTGTTGTTGGA +
Preference number: 1 (lower is better)
Translates to: TSSITLAIWAAVVVI*RPRFDEVPAFSVVG
Trigger: TCCAACAACAGAAAATGCAGGAACCTCATCAAAACGAGGTCTGCAGATCACTACCACTGCAGCCCAGATAGCCAAAGTTATGGAAGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR CCA 90 bp CATAAAGATTCTGCTTGTGTCTCTGCTTACTCCGGTGAGAGGCCTTaGGACTTAGGTTGTCAATGTTGTCGAAGGTTTCTGATAAATGCT +
Preference number: 1 (lower is better)
Translates to: HKDSACVSAYSGERP*DLGCQCCRRFLINA
Trigger: AGCATTTATCAGAAACCTTCGACAACATTGACAACCTAAGTCCCAAGGCCTCTCACCGGAGTAAGCAGAGACACAAGCAGAATCTTTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR TCA 90 bp TCTGCTGTCTGCAGAGTATTAGCAGAATCTGCTTCCTGTGTTGTCTaGTCACATCCTATTTCATCGTCAGCTGATGACAGTGATGATAAT +
Preference number: 1 (lower is better)
Translates to: SAVCRVLAESASCVV*SHPISSSADDSDDN
Trigger: ATTATCATCACTGTCATCAGCTGACGATGAAATAGGATGTGATCAGACAACACAGGAAGCAGATTCTGCTAATACTCTGCAGACAGCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR TCA 90 bp TGCATCAATGGCCTAACAAAAAGCAGAGTTAGAACAGGAGGAAAATaGCCTGGGTTTACAGAAGTCACGGTTCATAGAATTCCACATTAC +
Preference number: 1 (lower is better)
Translates to: CINGLTKSRVRTGGK*PGFTEVTVHRIPHY
Trigger: GTAATGTGGAATTCTATGAACCGTGACTTCTGTAAACCCAGGTCATTTTCCTCCTGTTCTAACTCTGCTTTTTGTTAGGCCATTGATGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR GCA 90 bp ATCTGTCCAGAAGTCATAGTCTCATCTTCAATACTTCCCTGTAGCTaGTTAAGTACTTCATTACGTAATGAATACTCTACGCCTGCTAAC +
Preference number: 1 (lower is better)
Translates to: ICPEVIVSSSILPCS*LSTSLRNEYSTPAN
Trigger: GTTAGCAGGCGTAGAGTATTCATTACGTAATGAAGTACTTAAGCAGCTACAGGGAAGTATTGAAGATGAGACTATGACTTCTGGACAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163295.2
3UTR TCA 90 bp AAATTGATTAGTTTCCTTTCACTTACAACCAATCTTCCCTCATCCTaGATTTCCCTTTCCATAGCCTCTTACTGCCCATCGAAACTAAGT +
Preference number: 1 (lower is better)
Translates to: KLISFLSLTTNLPSS*ISLSIASYCPSKLS
Trigger: ACTTAGTTTCGATGGGCAGTAAGAGGCTATGGAAAGGGAAATTCAGGATGAGGGAAGATTGGTTGTAAGTGAAAGGAAACTAATCAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR TCA 90 bp TATATGGGGAAACACATTCTTGTTGTCCAAAATGTGGTTGGAATTTaGGGTGTTTGTCATCGGTATTCTCAGAATAGACAGGATAACTGG +
Preference number: 1 (lower is better)
Translates to: YMGKHILVVQNVVGI*GVCHRYSQNRQDNW
Trigger: CCAGTTATCCTGTCTATTCTGAGAATACCGATGACAAACACCTCAAATTCCAACCACATTTTGGACAACAAGAATGTGTTTCCCCATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR GCA 90 bp ATCGGTATTCTCAGAATAGACAGGATAACTGGTGTTCTGGCTTCTTaGTTGTCTTTGCTCGTTTTGCTTTATTTCATCTTCTATCACATG +
Preference number: 1 (lower is better)
Translates to: IGILRIDRITGVLAS*LSLLVLLYFIFYHM
Trigger: CATGTGATAGAAGATGAAATAAAGCAAAACGAGCAAAGACAAGCAAGAAGCCAGAACACCAGTTATCCTGTCTATTCTGAGAATACCGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR GCA 90 bp GACAGAAGTACACCTGCTGAATACGAGCGGAGTCTCCTGGACATAGTGTTCTGGCGCACTCCTGTCGTCTaGCACACAATGGAACTCGGT +
Preference number: 2 (lower is better)
Translates to: DRSTPAEYERSLLDIVFWRTPVV*HTMELG
Trigger: ACCGAGTTCCATTGTGTGGCAGACGACAGGAGTGCG...CCAGAACACTATGTCCAGGAGACTCCGCTCGTATTCAGCAGGTGTACTTCTGTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR TCA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCGTGCATCCTGTGATGTaGACTGGGCCTTCAGGCTTT +
Preference number: 2 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPVHPVM*TGPSGF
Trigger: AAAGCCTGAAGGCCCAGTTCACATCACAGGATGCAC...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR-3UTR TCA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCGGAACCACATTACTGTaGATTTCACAGCCACATGAT +
Preference number: 2 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCIGTTLL*ISQPHD
Trigger: ATCATGTGGCTGTGAAATTCACAGTAATGTGGTTCC...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR-3UTR TCA 90 bp GGTATTCTCAGAATAGACAGGATAACTGGTGTTCTGGCTTCTTGCTTGTCTTTGCTCTGCTTACTCCGGTaGGAGGCCTTGGGACTTAGG +
Preference number: 2 (lower is better)
Translates to: GILRIDRITGVLASCLSLLCLLR*EALGLR
Trigger: CCTAAGTCCCAAGGCCTCTCACCGGAGTAAGCAGAG...CAAAGACAAGCAAGAAGCCAGAACACCAGTTATCCTGTCTATTCTGAGAATACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR CCA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCATGACTTTAGGGGGCTaGTTCTTTCCTTCTGCCATG +
Preference number: 2 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPMTLGG*FFPSAM
Trigger: CATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCAT...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR-3UTR TCA 90 bp GACAAGAGTGATGCACTCAGAGGCAGTGGACATCTTGACTTTCGTATTCCTAAGGAGTGCCTCCCAAAATaGCCAGTGAGGACAAAGTGT +
Preference number: 2 (lower is better)
Translates to: DKSDALRGSGHLDFRIPKECLPK*PVRTKC
Trigger: ACACTTTGTCCTCACTGGTCATTTTGGGAGGCACTC...CTTAGGAATACGAAAGTCAAGATGTCCACTGCCTCTGAGTGCATCACTCTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR-3UTR TCA 90 bp GACAGAAGTACACCTGCTGAATACGAGCGGAGTCTCCTGGACATAGTGTTCTGGCAAGTAGTGCCTTTTTaGGTCTGGCCATTTCTTTGT +
Preference number: 2 (lower is better)
Translates to: DRSTPAEYERSLLDIVFWQVVPF*VWPFLC
Trigger: ACAAAGAAATGGCCAGACTCAAAAAGGCACTACTTG...CCAGAACACTATGTCCAGGAGACTCCGCTCGTATTCAGCAGGTGTACTTCTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR GCA 90 bp TTTTACTTCTGCTGTCTGCAGAGTATTAGCAGAATCTGCTTCCTGTGTTGTCTGGGTGCCAACCAGAAATaGCAGTGCTCCATCCACAGC +
Preference number: 2 (lower is better)
Translates to: FYFCCLQSISRICFLCCLGANQK*QCSIHS
Trigger: GCTGTGGATGGAGCACTGGCATTTCTGGTTGGCACC...CAGACAACACAGGAAGCAGATTCTGCTAATACTCTGCAGACAGCAGAAGTAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR GCA 90 bp CGACTCTCAAAACTGTCAAGGGAGCTGACAGAAGTACACCTGCTGAATACGAGCGGCATCCTTATACTTTaGAGGTCTGTTTGCCATGAG +
Preference number: 2 (lower is better)
Translates to: RLSKLSRELTEVHLLNTSGILIL*RSVCHE
Trigger: CTCATGGCAAACAGACCTGCAAAGTATAAGGATGCC...GCTCGTATTCAGCAGGTGTACTTCTGTCAGCTCCCTTGACAGTTTTGAGAGTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR CCA 90 bp GACAAGAGTGATGCACTCAGAGGCAGTGGACATCTTGACTTTCGTATTCCTAAGGAGGTTGGAGGATTCTaGGGACAGACTTCATGTCAC +
Preference number: 2 (lower is better)
Translates to: DKSDALRGSGHLDFRIPKEVGGF*GQTSCH
Trigger: GTGACATGAAGTCTGTCCCCAGAATCCTCCAACCTC...CTTAGGAATACGAAAGTCAAGATGTCCACTGCCTCTGAGTGCATCACTCTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR-3UTR CCA 90 bp CGACTCTCAAAACTGTCAAGGGAGCTGACAGAAGTACACCTGCTGAATACGAGCTCCCACAAGGCTTCCTaGTCTTTAGGATTTCTTGCT +
Preference number: 2 (lower is better)
Translates to: RLSKLSRELTEVHLLNTSSHKAS*SLGFLA
Trigger: AGCAAGAAATCCTAAAGACCAGGAAGCCTTGTGGGA...GCTCGTATTCAGCAGGTGTACTTCTGTCAGCTCCCTTGACAGTTTTGAGAGTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR TCA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTGTGCATCCTGTGATGTaGACTGGGCCTTCAGGCTTT +
Preference number: 2 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSVHPVM*TGPSGF
Trigger: AAAGCCTGAAGGCCCAGTTCACATCACAGGATGCAC...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR-3UTR TCA 90 bp AGTATTAGCAGAATCTGCTTCCTGTGTTGTCTGATCACATCCTATTTCATCGTCTCTGGCTCCGGTAAGTaGGGGTGCCAACCAGAAATG +
Preference number: 2 (lower is better)
Translates to: SISRICFLCCLITSYFIVSGSGK*GCQPEM
Trigger: CATTTCTGGTTGGCACCCTCACTTACCGGAGCCAGA...GACGATGAAATAGGATGTGATCAGACAACACAGGAAGCAGATTCTGCTAATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR GCA 90 bp GTGCCAAGACAGGCGAGTGGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTGGACAATGGGATGGATaGTACTTAAATACATGTAAA +
Preference number: 2 (lower is better)
Translates to: VPRQASGGQRMTLGGWFFGQWDG*YLNTCK
Trigger: TTTACATGTATTTAAGTAGCATCCATCCCATTGTCC...AAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCCACTCGCCTGTCTTGGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR-3UTR GCA 90 bp AGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACCCTTCCCAGCAGGGCTaGCCATGGGAATTTCGTCTC +
Preference number: 2 (lower is better)
Translates to: SIYLVDQELICLLRAVLYPSQQG*PWEFRL
Trigger: GAGACGAAATTCCCATGGGCAGCCCTGCTGGGAAGG...GTACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR-3UTR GCA 90 bp GACAGAAGTACACCTGCTGAATACGAGCGGAGTCTCCTGGACATAGTGTTCTGGAGTATTAGCAGAATCTaGTTCCTGTGTTGTCTGATC +
Preference number: 2 (lower is better)
Translates to: DRSTPAEYERSLLDIVFWSISRI*FLCCLI
Trigger: GATCAGACAACACAGGAAGCAGATTCTGCTAATACT...CCAGAACACTATGTCCAGGAGACTCCGCTCGTATTCAGCAGGTGTACTTCTGTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR TCA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGTGGGCCTTCAGGCTTTaGGGCATCACCTTTACCTAC +
Preference number: 2 (lower is better)
Translates to: STKNSIIHRTYSRKDASMWAFRL*GITFTY
Trigger: GTAGGTAAAGGTGATGCCTCAAAGCCTGAAGGCCCA...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR-3UTR TCA 90 bp TTCTGCTGTCTGCAGAGTATTAGCAGAATCTGCTTCCTGTGTTGTCTGATCACAGCCATTTCTTTGTGCTaGACTTGGACGCAGCTGATT +
Preference number: 2 (lower is better)
Translates to: FCCLQSISRICFLCCLITAISLC*TWTQLI
Trigger: AATCAGCTGCGTCCAAGTTCAGCACAAAGAAATGGC...TGTGATCAGACAACACAGGAAGCAGATTCTGCTAATACTCTGCAGACAGCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR CCA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGGCCAAGACAGGCGAGTaGAGGTCAGAGGATGACTTT +
Preference number: 2 (lower is better)
Translates to: STKNSIIHRTYSRKDASMAKTGE*RSEDDF
Trigger: AAAGTCATCCTCTGACCTCCACTCGCCTGTCTTGGC...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR-3UTR CCA 90 bp CTGAATTTCCCTTTCCATAGCCTCTTACTGCCCATCGAAACTAAGTATTTTAAGAGCGTGTGTGGAGGTTaGAGGATTCTGGGGACAGAC +
Preference number: 2 (lower is better)
Translates to: LNFPFHSLLLPIETKYFKSVCGG*RILGTD
Trigger: GTCTGTCCCCAGAATCCTCCAACCTCCACACACGCT...CTTAAAATACTTAGTTTCGATGGGCAGTAAGAGGCTATGGAAAGGGAAATTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR-3UTR CCA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCATCTCCCATTGCTTATaGCAACCTTGGAGAACAATA +
Preference number: 2 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPISHCL*QPWRTI
Trigger: TATTGTTCTCCAAGGTTGCCATAAGCAATGGGAGAT...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR-3UTR CCA 90 bp TATGATTTGCACTGTGTATCTTATGGGCTAGGTCAGCTGGATACTGACCATAACGTGTTTGAGTGTGTGTaGGAGGCAGAGCTTCTTCGT +
Preference number: 2 (lower is better)
Translates to: YDLHCVSYGLGQLDTDHNVFECV*EAELLR
Trigger: ACGAAGAAGCTCTGCCTCCCACACACACTCAAACAC...GTTATGGTCAGTATCCAGCTGACCTAGCCCATAAGATACACAGTGCAAATCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR TCA 90 bp AATTATGGAGCGTGTGTGGAGGTTGGAGGATTCTGGGGACAGACTTCATGTCACGACCTGGCCCACTTTTaGATCTTTCTTGAAATATTA +
Preference number: 2 (lower is better)
Translates to: NYGACVEVGGFWGQTSCHDLAHF*IFLEIL
Trigger: TAATATTTCAAGAAAGATTCAAAAGTGGGCCAGGTC...GTGACATGAAGTCTGTCCCCAGAATCCTCCAACCTCCACACACGCTCCATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR-3UTR TCA 90 bp AGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACTGGGCCTTCAGGCTTTaGGGCATCACCTTTACCTAC +
Preference number: 2 (lower is better)
Translates to: SIYLVDQELICLLRAVLYWAFRL*GITFTY
Trigger: GTAGGTAAAGGTGATGCCTCAAAGCCTGAAGGCCCA...GTACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR-3UTR TCA 90 bp TATGATTTGCACTGTGTATCTTATGGGCTAGGTCAGCTGGATACTGACCATAACCAGGTCTGTTTGCCATaGGATTCCTTAAAGCTGCTG +
Preference number: 2 (lower is better)
Translates to: YDLHCVSYGLGQLDTDHNQVCLP*DSLKLL
Trigger: CAGCAGCTTTAAGGAATCTCATGGCAAACAGACCTG...GTTATGGTCAGTATCCAGCTGACCTAGCCCATAAGATACACAGTGCAAATCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR TCA 90 bp TATGATTTGCACTGTGTATCTTATGGGCTAGGTCAGCTGGATACTGACCATAACGAAGTTGTATGTGTTTaGGTGTGTGTGGGAGGCAGA +
Preference number: 2 (lower is better)
Translates to: YDLHCVSYGLGQLDTDHNEVVCV*VCVGGR
Trigger: TCTGCCTCCCACACACACTCAAACACATACAACTTC...GTTATGGTCAGTATCCAGCTGACCTAGCCCATAAGATACACAGTGCAAATCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR GCA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTACTGGTTCTTTCCTTCTaGCATGTGCATCCTGTGATG +
Preference number: 2 (lower is better)
Translates to: TRNEREPAVTYIPISHCLLVLSF*HVHPVM
Trigger: CATCACAGGATGCACATGGCAGAAGGAAAGAACCAG...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR-3UTR CCA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTAGCCAAGACAGGCGAGTaGAGGTCAGAGGATGACTTT +
Preference number: 2 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVAKTGE*RSEDDF
Trigger: AAAGTCATCCTCTGACCTCCACTCGCCTGTCTTGGC...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR-3UTR CCA 90 bp GGTATTCTCAGAATAGACAGGATAACTGGTGTTCTGGCTTCTTGCTTGTCTTTGCTGCTGCACTTCCCATaGCAATCATTTTGTGCTTGG +
Preference number: 2 (lower is better)
Translates to: GILRIDRITGVLASCLSLLLHFP*QSFCAW
Trigger: CCAAGCACAAAATGATTGCCATGGGAAGTGCAGCAG...CAAAGACAAGCAAGAAGCCAGAACACCAGTTATCCTGTCTATTCTGAGAATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR CAA 90 bp GAATCATCCAGTGAACTTCTGAAAGCACAACTAAGGTCAACCCCTTaGCTTTCACAGCCATTATCTCTAGCCAAAGGGTTTAATCCAGCA +
Preference number: 2 (lower is better)
Translates to: ESSSELLKAQLRSTP*LSQPLSLAKGFNPA
Trigger: TGCTGGATTAAACCCTTTGGCTAGAGATAATGGCTGTGAAAGCAAAGGGGTTGACCTTAGTTGTGCTTTCAGAAGTTCACTGGATGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR CAA 90 bp CTGGACAAGTCAATATTCAGGTCTCCCATGCCAAGGAGCATTTACTaGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTAC +
Preference number: 2 (lower is better)
Translates to: LDKSIFRSPMPRSIY*VDQELICLLRAVLY
Trigger: GTACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTCCTTGGCATGGGAGACCTGAATATTGACTTGTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR-3UTR TCA 90 bp TGTCAAGATCAGCAAGGAGTAATGATCTTTCTTTTTCAAGCTCTTCTAGATACCTGTTCTTCTTGGGAATaGCCCCATGGGGACAGGACT +
Preference number: 2 (lower is better)
Translates to: CQDQQGVMIFLFQALLDTCSSWE*PHGDRT
Trigger: AGTCCTGTCCCCATGGGGTCATTCCCAAGAAGAACA...GGTATCTAGAAGAGCTTGAAAAAGAAAGATCATTACTCCTTGCTGATCTTGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000163295.2
3UTR-3UTR TCA 90 bp TTCTGCTGTCTGCAGAGTATTAGCAGAATCTGCTTCCTGTGTTGTCTGATCACATTCCACATGCATTACTaGCTATTGTCAAGCTGTGAG +
Preference number: 2 (lower is better)
Translates to: FCCLQSISRICFLCCLITFHMHY*LLSSCE
Trigger: CTCACAGCTTGACAATAGTCAGTAATGCATGTGGAA...TGTGATCAGACAACACAGGAAGCAGATTCTGCTAATACTCTGCAGACAGCAGAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR GCA 90 bp AATTATGGAGCGTGTGTGGAGGTTGGAGGATTCTGGGGACAGACTTCATGTCACGGACAATGGGATGGATaGTACTTAAATACATGTAAA +
Preference number: 2 (lower is better)
Translates to: NYGACVEVGGFWGQTSCHGQWDG*YLNTCK
Trigger: TTTACATGTATTTAAGTAGCATCCATCCCATTGTCC...GTGACATGAAGTCTGTCCCCAGAATCCTCCAACCTCCACACACGCTCCATAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR-3UTR GCA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACTGTGTGTGCACACATaGAAATGTGCCAAGACAGGC +
Preference number: 2 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVLCVHT*KCAKTG
Trigger: GCCTGTCTTGGCACATTTGCATGTGTGCACACACAG...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR-3UTR GCA 90 bp AGTATTAGCAGAATCTGCTTCCTGTGTTGTCTGATCACATCCTATTTCATCGTCAACCAGAAATGCCAGTaGTCCATCCACAGCACAGAT +
Preference number: 2 (lower is better)
Translates to: SISRICFLCCLITSYFIVNQKCQ*SIHSTD
Trigger: ATCTGTGCTGTGGATGGAGCACTGGCATTTCTGGTT...GACGATGAAATAGGATGTGATCAGACAACACAGGAAGCAGATTCTGCTAATACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR GCA 90 bp TTTTACTTCTGCTGTCTGCAGAGTATTAGCAGAATCTGCTTCCTGTGTTGTCTGGGTGTTCTGGCTTCTTaGTTGTCTTTGCTCGTTTTG +
Preference number: 2 (lower is better)
Translates to: FYFCCLQSISRICFLCCLGVLAS*LSLLVL
Trigger: CAAAACGAGCAAAGACAAGCAAGAAGCCAGAACACC...CAGACAACACAGGAAGCAGATTCTGCTAATACTCTGCAGACAGCAGAAGTAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR CCA 90 bp CAGTCCTTTTCCTTCTCTTCTTTGTCAAGATCAGCAAGGAGTAATGATCTTTCTCAGATCTTCAGTCCTTaGTGGCTTAGCCTTTCCAGC +
Preference number: 2 (lower is better)
Translates to: QSFSFSSLSRSARSNDLSQIFSP*WLSLSS
Trigger: GCTGGAAAGGCTAAGCCACCAAGGACTGAAGATCTG...AGAAAGATCATTACTCCTTGCTGATCTTGACAAAGAAGAGAAGGAAAAGGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163295.2
3UTR-3UTR CCA 90 bp TTGGAGGGAGACTTGGCTCCTGAAGAAAACTCAACAGCTTTATTATGCCTGGTTTTGTTTCTGAACCACTaGTTCCCCTTGACCTATATG +
Preference number: 2 (lower is better)
Translates to: LEGDLAPEENSTALLCLVLFLNH*FPLTYM
Trigger: CATATAGGTCAAGGGGAACCAGTGGTTCAGAAACAA...AACCAGGCATAATAAAGCTGTTGAGTTTTCTTCAGGAGCCAAGTCTCCCTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR TCA 90 bp ATGGGAATTTCGTCTCCAATAGGTGGAATGGACTCTTCTTTTACTTCTAACATTGAGTGCCTCCCAAAATaGCCAGTGAGGACAAAGTGT +
Preference number: 2 (lower is better)
Translates to: MGISSPIGGMDSSFTSNIECLPK*PVRTKC
Trigger: ACACTTTGTCCTCACTGGTCATTTTGGGAGGCACTC...AATGTTAGAAGTAAAAGAAGAGTCCATTCCACCTATTGGAGACGAAATTCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR-3UTR TCA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTATTGCACTGGAAAGCCTaGAAGACAAAACTGGTAACT +
Preference number: 2 (lower is better)
Translates to: TRNEREPAVTYIPISHCLLHWKA*KTKLVT
Trigger: AGTTACCAGTTTTGTCTTTCAGGCTTTCCAGTGCAA...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR-3UTR TCA 90 bp TTGGAGGGAGACTTGGCTCCTGAAGAAAACTCAACAGCTTTATTATGCCTGGTTGGAGGTATGAATGGCTaGTACTTCTTCCATAACTTT +
Preference number: 2 (lower is better)
Translates to: LEGDLAPEENSTALLCLVGGMNG*YFFHNF
Trigger: AAAGTTATGGAAGAAGTATCAGCCATTCATACCTCC...AACCAGGCATAATAAAGCTGTTGAGTTTTCTTCAGGAGCCAAGTCTCCCTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR GCA 90 bp TTCTGCTGTCTGCAGAGTATTAGCAGAATCTGCTTCCTGTGTTGTCTGATCACATTCTCTCTTAGGATTTaGCTGTGGTCTTCGTTTGTA +
Preference number: 2 (lower is better)
Translates to: FCCLQSISRICFLCCLITFSLRI*LWSSFV
Trigger: TACAAACGAAGACCACAGGCAAATCCTAAGAGAGAA...TGTGATCAGACAACACAGGAAGCAGATTCTGCTAATACTCTGCAGACAGCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR CCA 90 bp ATGGGAATTTCGTCTCCAATAGGTGGAATGGACTCTTCTTTTACTTCTAACATTGAGGTTGGAGGATTCTaGGGACAGACTTCATGTCAC +
Preference number: 2 (lower is better)
Translates to: MGISSPIGGMDSSFTSNIEVGGF*GQTSCH
Trigger: GTGACATGAAGTCTGTCCCCAGAATCCTCCAACCTC...AATGTTAGAAGTAAAAGAAGAGTCCATTCCACCTATTGGAGACGAAATTCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR-3UTR CCA 90 bp GACAAGAGTGATGCACTCAGAGGCAGTGGACATCTTGACTTTCGTATTCCTAAGTGCTTATGGCAACCTTaGAGAACAATATGGAATACT +
Preference number: 2 (lower is better)
Translates to: DKSDALRGSGHLDFRIPKCLWQP*RTIWNT
Trigger: AGTATTCCATATTGTTCTCCAAGGTTGCCATAAGCA...CTTAGGAATACGAAAGTCAAGATGTCCACTGCCTCTGAGTGCATCACTCTTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR-3UTR CCA 90 bp AGTATTAGCAGAATCTGCTTCCTGTGTTGTCTGATCACATCCTATTTCATCGTCATAACTTTGGCTATCTaGGCTGCAGTGGTAGTGATC +
Preference number: 2 (lower is better)
Translates to: SISRICFLCCLITSYFIVITLAI*AAVVVI
Trigger: GATCACTACCACTGCAGCCCAGATAGCCAAAGTTAT...GACGATGAAATAGGATGTGATCAGACAACACAGGAAGCAGATTCTGCTAATACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR TCA 90 bp ATGGGAATTTCGTCTCCAATAGGTGGAATGGACTCTTCTTTTACTTCTAACATTTCAATACGGAGAAGATaGCGGGGTAAGACAGTTGCA +
Preference number: 2 (lower is better)
Translates to: MGISSPIGGMDSSFTSNISIRRR*RGKTVA
Trigger: TGCAACTGTCTTACCCCGTCATCTTCTCCGTATTGA...AATGTTAGAAGTAAAAGAAGAGTCCATTCCACCTATTGGAGACGAAATTCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR-3UTR TCA 90 bp AGTATTAGCAGAATCTGCTTCCTGTGTTGTCTGATCACATCCTATTTCATCGTCGTTTCTGATAAATGCTaGGCATCTAGCTCAGCTTCT +
Preference number: 2 (lower is better)
Translates to: SISRICFLCCLITSYFIVVSDKC*ASSSAS
Trigger: AGAAGCTGAGCTAGATGCTCAGCATTTATCAGAAAC...GACGATGAAATAGGATGTGATCAGACAACACAGGAAGCAGATTCTGCTAATACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR GCA 90 bp CTGAATTTCCCTTTCCATAGCCTCTTACTGCCCATCGAAACTAAGTATTTTAAGCGTCAGCTTCATTCATaGAGTAAAGCAAAGCAGGCT +
Preference number: 2 (lower is better)
Translates to: LNFPFHSLLLPIETKYFKRQLHS*SKAKQA
Trigger: AGCCTGCTTTGCTTTACTGCATGAATGAAGCTGACG...CTTAAAATACTTAGTTTCGATGGGCAGTAAGAGGCTATGGAAAGGGAAATTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR-3UTR CCA 90 bp AATACCAGTCCTTTTCCTTCTCTTCTTTGTCAAGATCAGCAAGGAGTAATGATCATCTTCAGTCCTTGGTaGCTTAGCCTTTCCAGCTTT +
Preference number: 2 (lower is better)
Translates to: NTSPFPSLLCQDQQGVMIIFSPW*LSLSSF
Trigger: AAAGCTGGAAAGGCTAAGCCACCAAGGACTGAAGAT...GATCATTACTCCTTGCTGATCTTGACAAAGAAGAGAAGGAAAAGGACTGGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163295.2
3UTR-3UTR CCA 90 bp GGTATTCTCAGAATAGACAGGATAACTGGTGTTCTGGCTTCTTGCTTGTCTTTGTATCATCATGTCGATTaGCGTCAAAAGCATAGTCAC +
Preference number: 2 (lower is better)
Translates to: GILRIDRITGVLASCLSLYHHVD*RQKHSH
Trigger: GTGACTATGCTTTTGACGCCAATCGACATGATGATA...CAAAGACAAGCAAGAAGCCAGAACACCAGTTATCCTGTCTATTCTGAGAATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR CCA 90 bp TATGATTTGCACTGTGTATCTTATGGGCTAGGTCAGCTGGATACTGACCATAACACTGAGGGTTTCATTTaGCCTCTTTTACCATATCCA +
Preference number: 2 (lower is better)
Translates to: YDLHCVSYGLGQLDTDHNTEGFI*PLLPYP
Trigger: TGGATATGGTAAAAGAGGCCAAATGAAACCCTCAGT...GTTATGGTCAGTATCCAGCTGACCTAGCCCATAAGATACACAGTGCAAATCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR CCA 90 bp GAAGAAAACTCAACAGCTTTATTATGCCTGGTTGATTCTGAAGATAAGCCAGAAGCACTGTGTATCTTATaGGCTAGGTCAGCTGGATAC +
Preference number: 2 (lower is better)
Translates to: EENSTALLCLVDSEDKPEALCIL*ARSAGY
Trigger: GTATCCAGCTGACCTAGCCCATAAGATACACAGTGC...TTCTGGCTTATCTTCAGAATCAACCAGGCATAATAAAGCTGTTGAGTTTTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR TCA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTAGGAACCACATTACTGTaGATTTCACAGCCACATGAT +
Preference number: 2 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVGTTLL*ISQPHD
Trigger: ATCATGTGGCTGTGAAATTCACAGTAATGTGGTTCC...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR-3UTR TCA 90 bp AGTATTAGCAGAATCTGCTTCCTGTGTTGTCTGATCACATCCTATTTCATCGTCATTTTGTGCTTGGAATaGATGAGGTTCTTGAGCATG +
Preference number: 2 (lower is better)
Translates to: SISRICFLCCLITSYFIVILCLE*MRFLSM
Trigger: CATGCTCAAGAACCTCATTCATTCCAAGCACAAAAT...GACGATGAAATAGGATGTGATCAGACAACACAGGAAGCAGATTCTGCTAATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR TCA 90 bp GGTATTCTCAGAATAGACAGGATAACTGGTGTTCTGGCTTCTTGCTTGTCTTTGAGTATTGAAATTGTCTaGCCTACTATCATCATGTCG +
Preference number: 2 (lower is better)
Translates to: GILRIDRITGVLASCLSLSIEIV*PTIIMS
Trigger: CGACATGATGATAGTAGGTCAGACAATTTCAATACT...CAAAGACAAGCAAGAAGCCAGAACACCAGTTATCCTGTCTATTCTGAGAATACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR TCA 90 bp TTTTACTTCTGCTGTCTGCAGAGTATTAGCAGAATCTGCTTCCTGTGTTGTCTGAGAGCATGTCCTATTTaGATTTTCCGACTTAGTGAA +
Preference number: 2 (lower is better)
Translates to: FYFCCLQSISRICFLCCLRACPI*IFRLSE
Trigger: TTCACTAAGTCGGAAAATTCAAATAGGACATGCTCT...CAGACAACACAGGAAGCAGATTCTGCTAATACTCTGCAGACAGCAGAAGTAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR GCA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTAACCTTAGGCTTTCTTTaGTGCAGTCCAAAGCTAAGT +
Preference number: 2 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVTLGFL*CSPKLS
Trigger: ACTTAGCTTTGGACTGCAGCAAAGAAAGCCTAAGGT...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR-3UTR GCA 90 bp TATGATTTGCACTGTGTATCTTATGGGCTAGGTCAGCTGGATACTGACCATAACCCACAAAGTTCCACATaGATTACTGACTATTGTCAA +
Preference number: 2 (lower is better)
Translates to: YDLHCVSYGLGQLDTDHNPQSST*ITDYCQ
Trigger: TTGACAATAGTCAGTAATGCATGTGGAACTTTGTGG...GTTATGGTCAGTATCCAGCTGACCTAGCCCATAAGATACACAGTGCAAATCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR GCA 90 bp CCTGTGTTGTCTGATCACATCCTATTTCATCGTCAGCTGATGACAGTGATGATAATCATCCATATGATTTaGACTGTGTATCTTATGGGC +
Preference number: 2 (lower is better)
Translates to: PVLSDHILFHRQLMTVMIIIHMI*TVYLMG
Trigger: GCCCATAAGATACACAGTGCAAATCATATGGATGAT...TATCATCACTGTCATCAGCTGACGATGAAATAGGATGTGATCAGACAACACAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR CCA 90 bp TTTTACTTCTGCTGTCTGCAGAGTATTAGCAGAATCTGCTTCCTGTGTTGTCTGTGTCCAAAATGTGGTTaGAATTTGAGGTGTTTGTCA +
Preference number: 2 (lower is better)
Translates to: FYFCCLQSISRICFLCCLCPKCG*NLRCLS
Trigger: TGACAAACACCTCAAATTCCAACCACATTTTGGACA...CAGACAACACAGGAAGCAGATTCTGCTAATACTCTGCAGACAGCAGAAGTAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR CAA 90 bp AATTTATTGGTGTATCCAGTTCTCCATCATTATCATCCATATGATTaGCACTGTGTATCTTATGGGCTAGGTCAGCTGGATACTGACCAT +
Preference number: 2 (lower is better)
Translates to: NLLVYPVLHHYHPYD*HCVSYGLGQLDTDH
Trigger: ATGGTCAGTATCCAGCTGACCTAGCCCATAAGATACACAGTGCAAATCATATGGATGATAATGATGGAGAACTGGATACACCAATAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR CCA 90 bp CTGAATTTCCCTTTCCATAGCCTCTTACTGCCCATCGAAACTAAGTATTTTAAGATCTCCCATTGCTTATaGCAACCTTGGAGAACAATA +
Preference number: 2 (lower is better)
Translates to: LNFPFHSLLLPIETKYFKISHCL*QPWRTI
Trigger: TATTGTTCTCCAAGGTTGCCATAAGCAATGGGAGAT...CTTAAAATACTTAGTTTCGATGGGCAGTAAGAGGCTATGGAAAGGGAAATTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR-3UTR TCA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTAGACCTGGCCCACTTTTaGATCTTTCTTGAAATATTA +
Preference number: 2 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVDLAHF*IFLEIL
Trigger: TAATATTTCAAGAAAGATTCAAAAGTGGGCCAGGTC...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR-3UTR TCA 90 bp GAAGAAAACTCAACAGCTTTATTATGCCTGGTTGATTCTGAAGATAAGCCAGAATTTAGGATTTCTTGCTaGGAGATTCCACAAAGTTCC +
Preference number: 2 (lower is better)
Translates to: EENSTALLCLVDSEDKPEFRISC*EIPQSS
Trigger: GGAACTTTGTGGAATCTCTCAGCAAGAAATCCTAAA...TTCTGGCTTATCTTCAGAATCAACCAGGCATAATAAAGCTGTTGAGTTTTCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR GCA 90 bp AATACCAGTCCTTTTCCTTCTCTTCTTTGTCAAGATCAGCAAGGAGTAATGATCATACTTCCCTGTAGCTaGTTAAGTACTTCATTACGT +
Preference number: 2 (lower is better)
Translates to: NTSPFPSLLCQDQQGVMIILPCS*LSTSLR
Trigger: ACGTAATGAAGTACTTAAGCAGCTACAGGGAAGTAT...GATCATTACTCCTTGCTGATCTTGACAAAGAAGAGAAGGAAAAGGACTGGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163295.2
3UTR-3UTR GCA 90 bp GAAGAAAACTCAACAGCTTTATTATGCCTGGTTGATTCTGAAGATAAGCCAGAAATTCTCTTTTACTTCTaGTGTCTGCAGAGTATTAGC +
Preference number: 2 (lower is better)
Translates to: EENSTALLCLVDSEDKPEILFYF*CLQSIS
Trigger: GCTAATACTCTGCAGACAGCAGAAGTAAAAGAGAAT...TTCTGGCTTATCTTCAGAATCAACCAGGCATAATAAAGCTGTTGAGTTTTCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR CAA 90 bp ACCGTAGTATTTAAATATGGTGAAAGAACAGTCATGTTTCCAGTATaGAAATTGTCTGACCTACTATCATCATGTCGATTGGCGTCAAAA +
Preference number: 2 (lower is better)
Translates to: TVVFKYGERTVMFPV*KLSDLLSSCRLASK
Trigger: TTTTGACGCCAATCGACATGATGATAGTAGGTCAGACAATTTCAATACTGGAAACATGACTGTTCTTTCACCATATTTAAATACTACGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR GCA 72 bp CCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTaGCTCCCCAGTGCTGGGACTAAAGGTGTGCGCCAC +
Preference number: 3 (lower is better)
Translates to: PGWPRTQKSTCL*LPSAGTKGVRH
Trigger: GTGGCGCACACCTTTAGTCCCAGCACTGGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079362.13
3UTR GCA 72 bp TGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTaGCTCTGCCTCCCCAGTGCTGGGACTAAAGGTGTG +
Preference number: 3 (lower is better)
Translates to: CRPGWPRTQKST*LCLPSAGTKGV
Trigger: CACACCTTTAGTCCCAGCACTGGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079362.13
3UTR GCA 72 bp CCTGCCTCTGCCTCCCCAGTGCTGGGACTAAAGGTGTaGGCCACCACTGCCGGCGTCAATTTAGTTTTAATC +
Preference number: 3 (lower is better)
Translates to: PASASPVLGLKV*ATTAGVNLVLI
Trigger: GATTAAAACTAAATTGACGCCGGCAGTGGTGGCGCACACCTTTAGTCCCAGCACTGGGGAGGCAGAGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079362.13
3UTR GCA 72 bp GGAGGCAGAGCTTCTTCGTGCCGCACTCCTGTCGTCTaGCACACAATGGAACTCGGTGGTAGAAGCAGAACT +
Preference number: 3 (lower is better)
Translates to: GGRASSCRTPVV*HTMELGGRSRT
Trigger: AGTTCTGCTTCTACCACCGAGTTCCATTGTGTGGCAGACGACAGGAGTGCGGCACGAAGAAGCTCTGCCTCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR TCA 72 bp GGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCCTGTaGTGTGAACTGGGCCTTCAGGCTTTGAGGCATCAC +
Preference number: 3 (lower is better)
Translates to: GGWFFPSAMCIL*CELGLQALRHH
Trigger: GTGATGCCTCAAAGCCTGAAGGCCCAGTTCACATCACAGGATGCACATGGCAGAAGGAAAGAACCAGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR GCA 72 bp TGTCTGGCTCCGGTAAGTGAGGGTGCCAACCAGAAATaGCAGTGCTCCATCCACAGCACAGATGTCAGCCTT +
Preference number: 3 (lower is better)
Translates to: CLAPVSEGANQK*QCSIHSTDVSL
Trigger: AAGGCTGACATCTGTGCTGTGGATGGAGCACTGGCATTTCTGGTTGGCACCCTCACTTACCGGAGCCAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR CCA 72 bp CTTCTTCGTGCCGCACTCCTGTCGTCTGCCACACAATaGAACTCGGTGGTAGAAGCAGAACTTCTGTCGTCC +
Preference number: 3 (lower is better)
Translates to: LLRAALLSSATQ*NSVVEAELLSS
Trigger: GGACGACAGAAGTTCTGCTTCTACCACCGAGTTCCATTGTGTGGCAGACGACAGGAGTGCGGCACGAAGAAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR TCA 72 bp CTGGGGACAGACTTCATGTCACCAGGCTTTACCTGCTaGGCCTTCTCGTTAGCCCTGAATGTCCTCATGGAC +
Preference number: 3 (lower is better)
Translates to: LGTDFMSPGFTC*AFSLALNVLMD
Trigger: GTCCATGAGGACATTCAGGGCTAACGAGAAGGCTCAGCAGGTAAAGCCTGGTGACATGAAGTCTGTCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR GCA 72 bp CTCCCCAGTGCTGGGACTAAAGGTGTGCGCCACCACTaGCGGCGTCAATTTAGTTTTAATCTAAGGCAGACC +
Preference number: 3 (lower is better)
Translates to: LPSAGTKGVRHH*RRQFSFNLRQT
Trigger: GGTCTGCCTTAGATTAAAACTAAATTGACGCCGGCAGTGGTGGCGCACACCTTTAGTCCCAGCACTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079362.13
3UTR CCA 72 bp GAAGCCTGGAGTCGGCTGGGTTTGGCTCTAGCATTCTaGGACACTGCTGGAACTTCAGTTGCAGGATCTTCA +
Preference number: 3 (lower is better)
Translates to: EAWSRLGLALAF*DTAGTSVAGSS
Trigger: TGAAGATCCTGCAACTGAAGTTCCAGCAGTGTCCCAGAATGCTAGAGCCAAACCCAGCCGACTCCAGGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR CAA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCGAGCGTGTGTGGAGGTaGGAGGATTCTGGGGACAGA +
Preference number: 3 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPERVWR*EDSGDR
Trigger: TCTGTCCCCAGAATCCTCCAACCTCCACACACGCTC...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR GCA 72 bp ATGTTCTTCTTGGGAATGACCCCATGGGGACAGGACTaGATTCTCCTGAACGGCTGGATACAGATCCTTCCC +
Preference number: 3 (lower is better)
Translates to: MFFLGMTPWGQD*ILLNGWIQILP
Trigger: GGGAAGGATCTGTATCCAGCCGTTCAGGAGAATGCAGTCCTGTCCCCATGGGGTCATTCCCAAGAAGAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163295.2
3UTR GCA 72 bp GTGCTTGGAATGAATGAGGTTCTTGAGCATGCTCACTaGCCCCATGTCCCACAAGGCTTCCTGGTCTTTAGG +
Preference number: 3 (lower is better)
Translates to: VLGMNEVLEHAH*PHVPQGFLVFR
Trigger: CCTAAAGACCAGGAAGCCTTGTGGGACATGGGGGCAGTGAGCATGCTCAAGAACCTCATTCATTCCAAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR CCA 72 bp ACTGGGGCTTATGATGCCACTCACCATTCCACTACATaGCTCACTCTGAACAGAGCTGGCAATGGAGCGACT +
Preference number: 3 (lower is better)
Translates to: TGAYDATHHSTT*LTLNRAGNGAT
Trigger: AGTCGCTCCATTGCCAGCTCTGTTCAGAGTGAGCCATGTAGTGGAATGGTGAGTGGCATCATAAGCCCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR CAA 90 bp GACAGAAGTACACCTGCTGAATACGAGCGGAGTCTCCTGGACATAGTGTTCTGGTGTCTAAACTTCCCCTaGAGGAAGAAGAGCTGGGCA +
Preference number: 3 (lower is better)
Translates to: DRSTPAEYERSLLDIVFWCLNFP*RKKSWA
Trigger: TGCCCAGCTCTTCTTCCTCAAGGGGAAGTTTAGACA...CCAGAACACTATGTCCAGGAGACTCCGCTCGTATTCAGCAGGTGTACTTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR CCA 72 bp GCCATGACTAGGGGAAAGACTGGGTACATAGTTGAGTaGTTCATCAGTGGGGTAGTGTTTAGGTCCCATGGG +
Preference number: 3 (lower is better)
Translates to: AMTRGKTGYIVE*FISGVVFRSHG
Trigger: CCCATGGGACCTAAACACTACCCCACTGATGAACCACTCAACTATGTACCCAGTCTTTCCCCTAGTCATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079362.13
3UTR CCA 72 bp TTATGCCTGGTTGATTCTGAAGATAAGCCAGAAGCCTaGAGTCGGCTGGGTTTGGCTCTAGCATTCTGGGAC +
Preference number: 3 (lower is better)
Translates to: LCLVDSEDKPEA*SRLGLALAFWD
Trigger: GTCCCAGAATGCTAGAGCCAAACCCAGCCGACTCCAGGCTTCTGGCTTATCTTCAGAATCAACCAGGCATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR CAA 90 bp AAGCCAGAAGCCTGGAGTCGGCTGGGTTTGGCTCTAGCATTCTGGGACACTGCTGCTTCTTGCTTGTCTTaGCTCGTTTTGCTTTATTTC +
Preference number: 3 (lower is better)
Translates to: KPEAWSRLGLALAFWDTAASCLS*LVLLYF
Trigger: GAAATAAAGCAAAACGAGCAAAGACAAGCAAGAAGC...AGCAGTGTCCCAGAATGCTAGAGCCAAACCCAGCCGACTCCAGGCTTCTGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR TCA 72 bp CTGGTTCTTTCCTTCTGCCATGTGCATCCTGTGATGTaGACTGGGCCTTCAGGCTTTGAGGCATCACCTTTA +
Preference number: 3 (lower is better)
Translates to: LVLSFCHVHPVM*TGPSGFEASPL
Trigger: TAAAGGTGATGCCTCAAAGCCTGAAGGCCCAGTTCACATCACAGGATGCACATGGCAGAAGGAAAGAACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR CCA 72 bp TCTGCTTGTGTCTCTGCTTACTCCGGTGAGAGGCCTTaGGACTTAGGTTGTCAATGTTGTCGAAGGTTTCTG +
Preference number: 3 (lower is better)
Translates to: SACVSAYSGERP*DLGCQCCRRFL
Trigger: CAGAAACCTTCGACAACATTGACAACCTAAGTCCCAAGGCCTCTCACCGGAGTAAGCAGAGACACAAGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR CAA 90 bp CGACTCTCAAAACTGTCAAGGGAGCTGACAGAAGTACACCTGCTGAATACGAGCCTTTTGGAGGGAGACTaGGCTCCTGAAGAAAACTCA +
Preference number: 3 (lower is better)
Translates to: RLSKLSRELTEVHLLNTSLLEGD*APEENS
Trigger: TGAGTTTTCTTCAGGAGCCAAGTCTCCCTCCAAAAG...GCTCGTATTCAGCAGGTGTACTTCTGTCAGCTCCCTTGACAGTTTTGAGAGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR TCA 72 bp TCTAGCTCAGCTTCTAGAGCTTTCTGTTTCCTAACGTaGAGGGATGGCAGACTTGAGCCGGGAGACATGATA +
Preference number: 3 (lower is better)
Translates to: SSSASRAFCFLT*RDGRLEPGDMI
Trigger: TATCATGTCTCCCGGCTCAAGTCTGCCATCCCTTCACGTTAGGAAACAGAAAGCTCTAGAAGCTGAGCTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR TCA 72 bp GTCTGGCCATTTCTTTGTGCTGAACTTGGACGCAGCTaGTTCTGCCTTTTGGCATTAGATGGAGGTACAGCT +
Preference number: 3 (lower is better)
Translates to: VWPFLCAELGRS*FCLLALDGGTA
Trigger: AGCTGTACCTCCATCTAATGCCAAAAGGCAGAATCAGCTGCGTCCAAGTTCAGCACAAAGAAATGGCCAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR CAA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTAGAGCGTGTGTGGAGGTaGGAGGATTCTGGGGACAGA +
Preference number: 3 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVERVWR*EDSGDR
Trigger: TCTGTCCCCAGAATCCTCCAACCTCCACACACGCTC...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR-3UTR CAA 90 bp GACAAGAGTGATGCACTCAGAGGCAGTGGACATCTTGACTTTCGTATTCCTAAGTATTCCCATCTCCCATaGCTTATGGCAACCTTGGAG +
Preference number: 3 (lower is better)
Translates to: DKSDALRGSGHLDFRIPKYSHLP*LMATLE
Trigger: CTCCAAGGTTGCCATAAGCAATGGGAGATGGGAATA...CTTAGGAATACGAAAGTCAAGATGTCCACTGCCTCTGAGTGCATCACTCTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR-3UTR CAA 90 bp ACAGCTGTATTCTCGCTGCTTGGAGAGAGATGTTCAGGTTTAGTGCTTTGTGCTTCACATGCTTTGGTCTaGCCCACCTTTCATTCTGTG +
Preference number: 3 (lower is better)
Translates to: TAVFSLLGERCSGLVLCASHALV*PTFHSV
Trigger: CACAGAATGAAAGGTGGGCAAGACCAAAGCATGTGA...AGCACAAAGCACTAAACCTGAACATCTCTCTCCAAGCAGCGAGAATACAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR CAA 90 bp CGACTCTCAAAACTGTCAAGGGAGCTGACAGAAGTACACCTGCTGAATACGAGCAGTCTGTATTGTTTCTaGGTTGATGGAGGGGACTTT +
Preference number: 3 (lower is better)
Translates to: RLSKLSRELTEVHLLNTSSLYCF*VDGGDF
Trigger: AAAGTCCCCTCCATCAACCAAGAAACAATACAGACT...GCTCGTATTCAGCAGGTGTACTTCTGTCAGCTCCCTTGACAGTTTTGAGAGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR TCA 72 bp AGGTTCCTGCATTTTCTGTTGTTGGATGGTAAGCACTaGGGCCAATACCTCGCTCTCTCTCCAAACTTCTGT +
Preference number: 3 (lower is better)
Translates to: RFLHFLLLDGKH*GQYLALSPNFC
Trigger: ACAGAAGTTTGGAGAGAGAGCGAGGTATTGGCCTCAGTGCTTACCATCCAACAACAGAAAATGCAGGAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR CCA 72 bp TTCCATTTACAAATGTTCTTCTTGGGAATGACCCCATaGGGACAGGACTGCATTCTCCTGAACGGCTGGATA +
Preference number: 3 (lower is better)
Translates to: FHLQMFFLGMTP*GQDCILLNGWI
Trigger: TATCCAGCCGTTCAGGAGAATGCAGTCCTGTCCCCATGGGGTCATTCCCAAGAAGAACATTTGTAAATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163295.2
3UTR TCA 72 bp GTCCCACAAGGCTTCCTGGTCTTTAGGATTTCTTGCTaGGAGATTCCACAAAGTTCCACATGCATTACTGAC +
Preference number: 3 (lower is better)
Translates to: VPQGFLVFRISC*EIPQSSTCITD
Trigger: GTCAGTAATGCATGTGGAACTTTGTGGAATCTCTCAGCAAGAAATCCTAAAGACCAGGAAGCCTTGTGGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR TCA 72 bp AGCTTTCTGTTTCCTAACGTGAAGGGATGGCAGACTTaGGCCGGGAGACATGATATTGGCATCCTTATACTT +
Preference number: 3 (lower is better)
Translates to: SFLFPNVKGWQT*AGRHDIGILIL
Trigger: AAGTATAAGGATGCCAATATCATGTCTCCCGGCTCAAGTCTGCCATCCCTTCACGTTAGGAAACAGAAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR TCA 72 bp GTGGTAGAAGCAGAACTTCTGTCGTCCTGGGAGGTATaGATGGCTGATACTTCTTCCATAACTTTGGCTATC +
Preference number: 3 (lower is better)
Translates to: VVEAELLSSWEV*MADTSSITLAI
Trigger: GATAGCCAAAGTTATGGAAGAAGTATCAGCCATTCATACCTCCCAGGACGACAGAAGTTCTGCTTCTACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR TCA 72 bp AGTAGTGCCTTTTTGAGTCTGGCCATTTCTTTGTGCTaGACTTGGACGCAGCTGATTCTGCCTTTTGGCATT +
Preference number: 3 (lower is better)
Translates to: SSAFLSLAISLC*TWTQLILPFGI
Trigger: AATGCCAAAAGGCAGAATCAGCTGCGTCCAAGTTCAGCACAAAGAAATGGCCAGACTCAAAAAGGCACTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR GCA 72 bp ATAACTTTGGCTATCTGGGCTGCAGTGGTAGTGATCTaGAGACCTCGTTTTGATGAGGTTCCTGCATTTTCT +
Preference number: 3 (lower is better)
Translates to: ITLAIWAAVVVI*RPRFDEVPAFS
Trigger: AGAAAATGCAGGAACCTCATCAAAACGAGGTCTGCAGATCACTACCACTGCAGCCCAGATAGCCAAAGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR CAA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCCAAGAACTGAAACTCTaGGCTATTAAGTATGTCAGT +
Preference number: 3 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPQELKL*AIKYVS
Trigger: ACTGACATACTTAATAGCCAAGAGTTTCAGTTCTTG...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR-3UTR CAA 90 bp TTGGAGGGAGACTTGGCTCCTGAAGAAAACTCAACAGCTTTATTATGCCTGGTTGCAAGTAGTGCCTTTTaGAGTCTGGCCATTTCTTTG +
Preference number: 3 (lower is better)
Translates to: LEGDLAPEENSTALLCLVASSAF*SLAISL
Trigger: CAAAGAAATGGCCAGACTCAAAAAGGCACTACTTGC...AACCAGGCATAATAAAGCTGTTGAGTTTTCTTCAGGAGCCAAGTCTCCCTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR TCA 72 bp AGTTTCCTTTCACTTACAACCAATCTTCCCTCATCCTaGATTTCCCTTTCCATAGCCTCTTACTGCCCATCG +
Preference number: 3 (lower is better)
Translates to: SFLSLTTNLPSS*ISLSIASYCPS
Trigger: CGATGGGCAGTAAGAGGCTATGGAAAGGGAAATTCAGGATGAGGGAAGATTGGTTGTAAGTGAAAGGAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR GCA 72 bp TTTGGTCTTGCCCACCTTTCATTCTGTGAGGGACTCTaGCTTCCTGAGTTCAACTGCTCATCTGAATATTTA +
Preference number: 3 (lower is better)
Translates to: FGLAHLSFCEGL*LPEFNCSSEYL
Trigger: TAAATATTCAGATGAGCAGTTGAACTCAGGAAGGCAGAGTCCCTCACAGAATGAAAGGTGGGCAAGACCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR CAA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTGTCCAGTGCCTAGTCTaGTGCTATTATAGGCATTTG +
Preference number: 3 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSVQCLV*CYYRHL
Trigger: CAAATGCCTATAATAGCACAAGACTAGGCACTGGAC...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR-3UTR CAA 90 bp TATGATTTGCACTGTGTATCTTATGGGCTAGGTCAGCTGGATACTGACCATAACTCTGCAGACCTCGTTTaGATGAGGTTCCTGCATTTT +
Preference number: 3 (lower is better)
Translates to: YDLHCVSYGLGQLDTDHNSADLV*MRFLHF
Trigger: AAAATGCAGGAACCTCATCAAAACGAGGTCTGCAGA...GTTATGGTCAGTATCCAGCTGACCTAGCCCATAAGATACACAGTGCAAATCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR TCA 72 bp CCTGCTAACAAACGTAAGCTCAATTGTGTTTTGTTTTaGAGCTCACTGTGCACAGGTACAGATCTTCAGTCC +
Preference number: 3 (lower is better)
Translates to: PANKRKLNCVLF*SSLCTGTDLQS
Trigger: GGACTGAAGATCTGTACCTGTGCACAGTGAGCTTCAAAACAAAACACAATTGAGCTTACGTTTGTTAGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163295.2
3UTR TCA 72 bp TGCAGAGTATTAGCAGAATCTGCTTCCTGTGTTGTCTaGTCACATCCTATTTCATCGTCAGCTGATGACAGT +
Preference number: 3 (lower is better)
Translates to: CRVLAESASCVV*SHPISSSADDS
Trigger: ACTGTCATCAGCTGACGATGAAATAGGATGTGATCAGACAACACAGGAAGCAGATTCTGCTAATACTCTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR GCA 72 bp GACCGAGTTACATCATTCTCTTTTACTTCTGCTGTCTaGAGAGTATTAGCAGAATCTGCTTCCTGTGTTGTC +
Preference number: 3 (lower is better)
Translates to: DRVTSFSFTSAV*RVLAESASCVV
Trigger: GACAACACAGGAAGCAGATTCTGCTAATACTCTGCAGACAGCAGAAGTAAAAGAGAATGATGTAACTCGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR CCA 72 bp TTAAGTATGTCAGTGTATTCTCATTCATATGGGCAGTaGGCACTTAATAACATCCCAACCACCGGACCCATT +
Preference number: 3 (lower is better)
Translates to: LSMSVYSHSYGQ*ALNNIPTTGPI
Trigger: AATGGGTCCGGTGGTTGGGATGTTATTAAGTGCCCACTGCCCATATGAATGAGAATACACTGACATACTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR-3UTR CAA 90 bp CTGAATTTCCCTTTCCATAGCCTCTTACTGCCCATCGAAACTAAGTATTTTAAGTATTCCCATCTCCCATaGCTTATGGCAACCTTGGAG +
Preference number: 3 (lower is better)
Translates to: LNFPFHSLLLPIETKYFKYSHLP*LMATLE
Trigger: CTCCAAGGTTGCCATAAGCAATGGGAGATGGGAATA...CTTAAAATACTTAGTTTCGATGGGCAGTAAGAGGCTATGGAAAGGGAAATTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR-3UTR CAA 90 bp TTGGAGGGAGACTTGGCTCCTGAAGAAAACTCAACAGCTTTATTATGCCTGGTTAAATGTGGTTGGAATTaGAGGTGTTTGTCATCGGTA +
Preference number: 3 (lower is better)
Translates to: LEGDLAPEENSTALLCLVKCGWN*RCLSSV
Trigger: TACCGATGACAAACACCTCAAATTCCAACCACATTT...AACCAGGCATAATAAAGCTGTTGAGTTTTCTTCAGGAGCCAAGTCTCCCTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR CAA 90 bp CCTGTGTTGTCTGATCACATCCTATTTCATCGTCAGCTGATGACAGTGATGATATGTATTGTTTCTTGGTaGATGGAGGGGACTTTGCAA +
Preference number: 3 (lower is better)
Translates to: PVLSDHILFHRQLMTVMICIVSW*MEGTLQ
Trigger: TTGCAAAGTCCCCTCCATCAACCAAGAAACAATACA...TATCATCACTGTCATCAGCTGACGATGAAATAGGATGTGATCAGACAACACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR CAA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTAGTCCAGTGCCTAGTCTaGTGCTATTATAGGCATTTG +
Preference number: 3 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVVQCLV*CYYRHL
Trigger: CAAATGCCTATAATAGCACAAGACTAGGCACTGGAC...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR-3UTR CAA 90 bp TTGGAGGGAGACTTGGCTCCTGAAGAAAACTCAACAGCTTTATTATGCCTGGTTTTCTTCTTCTTCATGTaGTTCTTCCTCAGAATAACG +
Preference number: 3 (lower is better)
Translates to: LEGDLAPEENSTALLCLVFFFFM*FFLRIT
Trigger: CGTTATTCTGAGGAAGAACAACATGAAGAAGAAGAA...AACCAGGCATAATAAAGCTGTTGAGTTTTCTTCAGGAGCCAAGTCTCCCTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR CAA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTCCATTAAAAATGAAGTaGTCTTTAGCGGGTAGGAAT +
Preference number: 3 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSPLKMK*SLAGRN
Trigger: ATTCCTACCCGCTAAAGACAACTTCATTTTTAATGG...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR-3UTR CAA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTACAAGAACTGAAACTCTaGGCTATTAAGTATGTCAGT +
Preference number: 3 (lower is better)
Translates to: TRNEREPAVTYIPISHCLQELKL*AIKYVS
Trigger: ACTGACATACTTAATAGCCAAGAGTTTCAGTTCTTG...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR-3UTR CAA 90 bp AATACCAGTCCTTTTCCTTCTCTTCTTTGTCAAGATCAGCAAGGAGTAATGATCCAATTGTGTTTTGTTTaGAAGCTCACTGTGCACAGG +
Preference number: 3 (lower is better)
Translates to: NTSPFPSLLCQDQQGVMIQLCFV*KLTVHR
Trigger: CCTGTGCACAGTGAGCTTCAAAACAAAACACAATTG...GATCATTACTCCTTGCTGATCTTGACAAAGAAGAGAAGGAAAAGGACTGGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163295.2
3UTR-3UTR CAA 90 bp CCTGTGTTGTCTGATCACATCCTATTTCATCGTCAGCTGATGACAGTGATGATAAAAGTTTGTAGGCAATaGTTCTCTCTTAGGATTTGC +
Preference number: 3 (lower is better)
Translates to: PVLSDHILFHRQLMTVMIKVCRQ*FSLRIC
Trigger: GCAAATCCTAAGAGAGAACAATTGCCTACAAACTTT...TATCATCACTGTCATCAGCTGACGATGAAATAGGATGTGATCAGACAACACAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR CAA 90 bp GAAGAAAACTCAACAGCTTTATTATGCCTGGTTGATTCTGAAGATAAGCCAGAAGTTCTGGCTTCTTGCTaGTCTTTGCTCGTTTTGCTT +
Preference number: 3 (lower is better)
Translates to: EENSTALLCLVDSEDKPEVLASC*SLLVLL
Trigger: AAGCAAAACGAGCAAAGACAAGCAAGAAGCCAGAAC...TTCTGGCTTATCTTCAGAATCAACCAGGCATAATAAAGCTGTTGAGTTTTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR CAA 90 bp GAAGAAAACTCAACAGCTTTATTATGCCTGGTTGATTCTGAAGATAAGCCAGAATGGTGTTCTGGCTTCTaGCTTGTCTTTGCTCGTTTT +
Preference number: 3 (lower is better)
Translates to: EENSTALLCLVDSEDKPEWCSGF*LVFARF
Trigger: AAAACGAGCAAAGACAAGCAAGAAGCCAGAACACCA...TTCTGGCTTATCTTCAGAATCAACCAGGCATAATAAAGCTGTTGAGTTTTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR TCA 72 bp TTCCTACCTAATAAGAGTGCCTCCCAAAATGACCAGTaGGGACAAAGTGTACTATCAAATATGGTTTCCAGA +
Preference number: 3 (lower is better)
Translates to: FLPNKSASQNDQ*GQSVLSNMVSR
Trigger: TCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGGCACTCTTATTAGGTAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR TCA 72 bp TTGCTGAGAGATTCCACAAAGTTCCACATGCATTACTaGCTATTGTCAAGCTGTGAGATTTCAAGTGCTGTA +
Preference number: 3 (lower is better)
Translates to: LLRDSTKFHMHY*LLSSCEISSAV
Trigger: TACAGCACTTGAAATCTCACAGCTTGACAATAGTCAGTAATGCATGTGGAACTTTGTGGAATCTCTCAGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR TCA 72 bp ATTGGTGTATCCAGTTCTCCATCATTATCATCCATATaGTTTGCACTGTGTATCTTATGGGCTAGGTCAGCT +
Preference number: 3 (lower is better)
Translates to: IGVSSSPSLSSI*FALCILWARSA
Trigger: AGCTGACCTAGCCCATAAGATACACAGTGCAAATCATATGGATGATAATGATGGAGAACTGGATACACCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR GCA 72 bp CTTTTTCAAGCTCTTCTAGATACCCAGTACTCTCTCTaGTTCCATTTACAAATGTTCTTCTTGGGAATGACC +
Preference number: 3 (lower is better)
Translates to: LFQALLDTQYSL*FHLQMFFLGMT
Trigger: GGTCATTCCCAAGAAGAACATTTGTAAATGGAAGCAGAGAGAGTACTGGGTATCTAGAAGAGCTTGAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163295.2
3UTR GCA 72 bp TTTTACTTCTGCTGTCTGCAGAGTATTAGCAGAATCTaGTTCCTGTGTTGTCTGATCACATCCTATTTCATC +
Preference number: 3 (lower is better)
Translates to: FYFCCLQSISRI*FLCCLITSYFI
Trigger: GATGAAATAGGATGTGATCAGACAACACAGGAAGCAGATTCTGCTAATACTCTGCAGACAGCAGAAGTAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR CAA 90 bp GAAGAAAACTCAACAGCTTTATTATGCCTGGTTGATTCTGAAGATAAGCCAGAATGGGGAAACACATTCTaGTTGTCCAAAATGTGGTTG +
Preference number: 3 (lower is better)
Translates to: EENSTALLCLVDSEDKPEWGNTF*LSKMWL
Trigger: CAACCACATTTTGGACAACAAGAATGTGTTTCCCCA...TTCTGGCTTATCTTCAGAATCAACCAGGCATAATAAAGCTGTTGAGTTTTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR TCA 72 bp TGCAAAGAAACCCTGGCAACCATCTCCCATTTTCAGTaGCAAAGTCATCTTTCAATTAACTTTGTGGTAACA +
Preference number: 3 (lower is better)
Translates to: CKETLATISHFQ*QSHLSINFVVT
Trigger: TGTTACCACAAAGTTAATTGAAAGATGACTTTGTCACTGAAAATGGGAGATGGTTGCCAGGGTTTCTTTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR GCA 72 bp GAACAGCATTATACACAGAACATACAGTCGGAAAGATaGATCAATGGCCTAACAAAAAGCAGAGTTAGAACA +
Preference number: 3 (lower is better)
Translates to: EQHYTQNIQSER*INGLTKSRVRT
Trigger: TGTTCTAACTCTGCTTTTTGTTAGGCCATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR TCA 72 bp AAACACATTCTTGTTGTCCAAAATGTGGTTGGAATTTaGGGTGTTTGTCATCGGTATTCTCAGAATAGACAG +
Preference number: 3 (lower is better)
Translates to: KHILVVQNVVGI*GVCHRYSQNRQ
Trigger: CTGTCTATTCTGAGAATACCGATGACAAACACCTCAAATTCCAACCACATTTTGGACAACAAGAATGTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR GCA 72 bp GAAGTCATAGTCTCATCTTCAATACTTCCCTGTAGCTaGTTAAGTACTTCATTACGTAATGAATACTCTACG +
Preference number: 3 (lower is better)
Translates to: EVIVSSSILPCS*LSTSLRNEYST
Trigger: CGTAGAGTATTCATTACGTAATGAAGTACTTAAGCAGCTACAGGGAAGTATTGAAGATGAGACTATGACTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163295.2
3UTR-3UTR CAA 90 bp ATGGGAATTTCGTCTCCAATAGGTGGAATGGACTCTTCTTTTACTTCTAACATTTTGTTACTTCTGAAATaGAACCGTCAGCTTCATTCA +
Preference number: 3 (lower is better)
Translates to: MGISSPIGGMDSSFTSNILLLLK*NRQLHS
Trigger: TGAATGAAGCTGACGGTTCAATTTCAGAAGTAACAA...AATGTTAGAAGTAAAAGAAGAGTCCATTCCACCTATTGGAGACGAAATTCCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR-3UTR CAA 90 bp GAAGAAAACTCAACAGCTTTATTATGCCTGGTTGATTCTGAAGATAAGCCAGAAGTCATGTTTCCAGTATaGAAATTGTCTGACCTACTA +
Preference number: 3 (lower is better)
Translates to: EENSTALLCLVDSEDKPEVMFPV*KLSDLL
Trigger: TAGTAGGTCAGACAATTTCAATACTGGAAACATGAC...TTCTGGCTTATCTTCAGAATCAACCAGGCATAATAAAGCTGTTGAGTTTTCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR-3UTR CAA 90 bp GAAGAAAACTCAACAGCTTTATTATGCCTGGTTGATTCTGAAGATAAGCCAGAATATCATCCATATGATTaGCACTGTGTATCTTATGGG +
Preference number: 3 (lower is better)
Translates to: EENSTALLCLVDSEDKPEYHPYD*HCVSYG
Trigger: CCCATAAGATACACAGTGCAAATCATATGGATGATA...TTCTGGCTTATCTTCAGAATCAACCAGGCATAATAAAGCTGTTGAGTTTTCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
3UTR CCA 72 bp ACCTATATTCCCATCTCCCATTGCTTATGGCAACCTTaGAGAACAATATGGAATACTGATATAAAACAACTT +
Preference number: 3 (lower is better)
Translates to: TYIPISHCLWQP*RTIWNTDIKQL
Trigger: AAGTTGTTTTATATCAGTATTCCATATTGTTCTCCAAGGTTGCCATAAGCAATGGGAGATGGGAATATAGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCGCATACCCGGATGCCTaGGGCTTACTGGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCIAYPDA*GLLGSP
Trigger: AGGAGAGCCCAGTAAGCCTCAGGCATCCGGGTATGC...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCTGGCAGGTGCCAAGCTaGTCCTCCATTGCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCIWQVPS*SSIAAL
Trigger: CAGGGCTGCAATGGAGGAGCAGCTTGGCACCTGCCA...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GTGCCAAGACAGGCGAGTGGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTAATGATGTTGTGGAGTaGTGCACTGGCCCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: VPRQASGGQRMTLGGWFFNDVVE*CTGPGP
Trigger: CGGGCCAGGGCCAGTGCAGCACTCCACAACATCATT...AAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCCACTCGCCTGTCTTGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GTGCCAAGACAGGCGAGTGGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTGGCCTGCACTGTCTGTaGAGGAGGTGGAGGGGTTTT +
Preference number: 4 (lower is better)
Translates to: VPRQASGGQRMTLGGWFFGLHCL*RRWRGF
Trigger: AAAACCCCTCCACCTCCTCCACAGACAGTGCAGGCC...AAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCCACTCGCCTGTCTTGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp GTGCCAAGACAGGCGAGTGGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTACAGCAGGACAGATCTaGTGCTCAACAGGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: VPRQASGGQRMTLGGWFFTAGQI*CSTGAG
Trigger: GCCAGCTCCTGTTGAGCATCAGATCTGTCCTGCTGT...AAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCCACTCGCCTGTCTTGGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GTGCCAAGACAGGCGAGTGGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTGAGGTGGAGGGGTTTTaGTTCTGCTTGGTGGCATGG +
Preference number: 4 (lower is better)
Translates to: VPRQASGGQRMTLGGWFFEVEGF*FCLVAW
Trigger: CCATGCCACCAAGCAGAAGCAAAACCCCTCCACCTC...AAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCCACTCGCCTGTCTTGGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCACGGCCGGGCTGAAGTaGTGTCTGCGCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPTAGLK*CLRCSS
Trigger: GGAAGAGCAGCGCAGACAGCACTTCAGCCCGGCCGT...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCGGCCTGCACTGTCTGTaGAGGAGGTGGAGGGGTTTT +
Preference number: 4 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCIGLHCL*RRWRGF
Trigger: AAAACCCCTCCACCTCCTCCACAGACAGTGCAGGCC...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp GTGCCAAGACAGGCGAGTGGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTAGGACTGCATTCTCCTaGACGGCTGGATACAGATCC +
Preference number: 4 (lower is better)
Translates to: VPRQASGGQRMTLGGWFFRTAFS*TAGYRS
Trigger: GGATCTGTATCCAGCCGTTCAGGAGAATGCAGTCCT...AAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCCACTCGCCTGTCTTGGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp GTGCCAAGACAGGCGAGTGGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTTGGAGCTACTGGAACTaGAAGGGGTACGCTCTGCTA +
Preference number: 4 (lower is better)
Translates to: VPRQASGGQRMTLGGWFFWSYWN*KGYALL
Trigger: TAGCAGAGCGTACCCCTTTCAGTTCCAGTAGCTCCA...AAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCCACTCGCCTGTCTTGGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp GACAAGAGTGATGCACTCAGAGGCAGTGGACATCTTGACTTTCGTATTCCTAAGCTGAGACGGCCGGGCTaGAGTGCTGTCTGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: DKSDALRGSGHLDFRIPKLRRPG*SAVCAA
Trigger: AGCAGCGCAGACAGCACTTCAGCCCGGCCGTCTCAG...CTTAGGAATACGAAAGTCAAGATGTCCACTGCCTCTGAGTGCATCACTCTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp AATTATGGAGCGTGTGTGGAGGTTGGAGGATTCTGGGGACAGACTTCATGTCACTGGCAGGTGCCAAGCTaGTCCTCCATTGCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: NYGACVEVGGFWGQTSCHWQVPS*SSIAAL
Trigger: CAGGGCTGCAATGGAGGAGCAGCTTGGCACCTGCCA...GTGACATGAAGTCTGTCCCCAGAATCCTCCAACCTCCACACACGCTCCATAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCAGGCAGCATCATGCCTaGTCTGAGATGACCTCTCCG +
Preference number: 4 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCIRQHHA*SEMTSP
Trigger: CGGAGAGGTCATCTCAGAGCAGGCATGATGCTGCCT...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079362.13
CDS-3UTR GCA 90 bp AATTATGGAGCGTGTGTGGAGGTTGGAGGATTCTGGGGACAGACTTCATGTCACGGGAGCATACCCGGATaGCTGAGGCTTACTGGGCTC +
Preference number: 4 (lower is better)
Translates to: NYGACVEVGGFWGQTSCHGSIPG*LRLTGL
Trigger: GAGCCCAGTAAGCCTCAGGCATCCGGGTATGCTCCC...GTGACATGAAGTCTGTCCCCAGAATCCTCCAACCTCCACACACGCTCCATAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCCCGCTAGGTGAGCTGTaGTTGCTGGAGCTACTGGAA +
Preference number: 4 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCIPLGEL*LLELLE
Trigger: TTCCAGTAGCTCCAGCAAGCACAGCTCACCTAGCGG...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCGATAAGCCAGAAGCCTaGAGTCGGCTGGGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCIDKPEA*SRLGLA
Trigger: AGCCAAACCCAGCCGACTCCAGGCTTCTGGCTTATC...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GTGCCAAGACAGGCGAGTGGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTTCTGAGCACCACTTTTaGAGGGAGACTTGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: VPRQASGGQRMTLGGWFFSEHHF*RETWLL
Trigger: CAGGAGCCAAGTCTCCCTCCAAAAGTGGTGCTCAGA...AAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCCACTCGCCTGTCTTGGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCCAGGCTGTGAGTGAATaGTGTTGTGGAGTGCTGCAC +
Preference number: 4 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCIQAVSE*CCGVLH
Trigger: GTGCAGCACTCCACAACATCATTCACTCACAGCCTG...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp CATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATGGGGAACCACATTACCTGAGACGGCCGGGCTaGAGTGCTGTCTGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: HAVKQSRLGKHIHGEPHYLRRPG*SAVCAA
Trigger: AGCAGCGCAGACAGCACTTCAGCCCGGCCGTCTCAG...GTAATGTGGTTCCCCATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCCTCGGATTTCACGCCTaGCTCTCTTGTCATCAGGCT +
Preference number: 4 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCILGFHA*LSCHQA
Trigger: AGCCTGATGACAAGAGAGGCAGGCGTGAAATCCGAG...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GTGCCAAGACAGGCGAGTGGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTGCATTTACAGCAGTCTaGTTAGGCCCACTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: VPRQASGGQRMTLGGWFFAFTAV*LGPLSL
Trigger: GAGAGAGAGTGGGCCTAAGCAGACTGCTGTAAATGC...AAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCCACTCGCCTGTCTTGGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCTGGATTCAGCACCACTaGCAGCACCTGAGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPWIQHH*QHLRKR
Trigger: GCGCTTCCTCAGGTGCTGCCAGTGGTGCTGAATCCA...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GTGCCAAGACAGGCGAGTGGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTGACTTTGGGCTCCACTaGATTCTGTGCTGTCAGTCT +
Preference number: 4 (lower is better)
Translates to: VPRQASGGQRMTLGGWFFDFGLH*ILCCQS
Trigger: AGACTGACAGCACAGAATCCAGTGGAGCCCAAAGTC...AAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCCACTCGCCTGTCTTGGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCTCTGGCTCCGGTAAGTaGGGGTGCCAACCAGAAATG +
Preference number: 4 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPSGSGK*GCQPEM
Trigger: CATTTCTGGTTGGCACCCTCACTTACCGGAGCCAGA...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp AATTATGGAGCGTGTGTGGAGGTTGGAGGATTCTGGGGACAGACTTCATGTCACGGTCACTGGGGCTTATaGTGCCACTCACCATTCCAC +
Preference number: 4 (lower is better)
Translates to: NYGACVEVGGFWGQTSCHGHWGL*CHSPFH
Trigger: GTGGAATGGTGAGTGGCATCATAAGCCCCAGTGACC...GTGACATGAAGTCTGTCCCCAGAATCCTCCAACCTCCACACACGCTCCATAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp GACAAGAGTGATGCACTCAGAGGCAGTGGACATCTTGACTTTCGTATTCCTAAGAGCTGCCTGCTGGCTTaGGTTTGGTTCTGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: DKSDALRGSGHLDFRIPKSCLLA*VWFWAA
Trigger: TGCCGCCCAGAACCAAACTCAAGCCAGCAGGCAGCT...CTTAGGAATACGAAAGTCAAGATGTCCACTGCCTCTGAGTGCATCACTCTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCGAGAGAGCTGTTTCTTaGGAAACAGACAGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCIERAVS*ETDRGV
Trigger: GACACCCCTGTCTGTTTCTCAAGAAACAGCTCTCTC...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp GTGCCAAGACAGGCGAGTGGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTATTTGACCCACTaGTTTGGGAAGTTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: VPRQASGGQRMTLGGWFFPYLTH*FGKFAW
Trigger: CCAGGCAAACTTCCCAAATCAGTGGGTCAAATAAGG...AAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCCACTCGCCTGTCTTGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GTGCCAAGACAGGCGAGTGGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTATCTCACAGTCCACCTaGAATAACTCTGCAATGGCC +
Preference number: 4 (lower is better)
Translates to: VPRQASGGQRMTLGGWFFISQST*NNSAMA
Trigger: GGCCATTGCAGAGTTATTGCAGGTGGACTGTGAGAT...AAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCCACTCGCCTGTCTTGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCGGTGCCAACCAGAAATaGCAGTGCTCCATCCACAGC +
Preference number: 4 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPGANQK*QCSIHS
Trigger: GCTGTGGATGGAGCACTGGCATTTCTGGTTGGCACC...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCTTTGGCTATCTGGGCTaGAGTGGTAGTGATCTGCAG +
Preference number: 4 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCIFGYLG*SGSDLQ
Trigger: CTGCAGATCACTACCACTGCAGCCCAGATAGCCAAA...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp AATTATGGAGCGTGTGTGGAGGTTGGAGGATTCTGGGGACAGACTTCATGTCACCGCACTCCTGTCGTCTaGCACACAATGGAACTCGGT +
Preference number: 4 (lower is better)
Translates to: NYGACVEVGGFWGQTSCHRTPVV*HTMELG
Trigger: ACCGAGTTCCATTGTGTGGCAGACGACAGGAGTGCG...GTGACATGAAGTCTGTCCCCAGAATCCTCCAACCTCCACACACGCTCCATAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCAGGACCTGCACCCTCTaGACGGCAGCATTTACAGCA +
Preference number: 4 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPRTCTL*TAAFTA
Trigger: TGCTGTAAATGCTGCCGTGCAGAGGGTGCAGGTCCT...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GTGCCAAGACAGGCGAGTGGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTGACTTACTAGCTGCCTaGTGGCTTGAGTTTGGTTCT +
Preference number: 4 (lower is better)
Translates to: VPRQASGGQRMTLGGWFFDLLAA*WLEFGS
Trigger: AGAACCAAACTCAAGCCAGCAGGCAGCTAGTAAGTC...AAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCCACTCGCCTGTCTTGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GTGCCAAGACAGGCGAGTGGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTTTTCGCCCTGGAGACTaGATTGGCCTACTTAATGGT +
Preference number: 4 (lower is better)
Translates to: VPRQASGGQRMTLGGWFFFRPGD*IGLLNG
Trigger: ACCATTAAGTAGGCCAATGCAGTCTCCAGGGCGAAA...AAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCCACTCGCCTGTCTTGGCAC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCGCACAGGACTGCCACTaGCCACACTCTGTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPAQDCH*PHSVSH
Trigger: ATGGGAAACAGAGTGTGGGCAGTGGCAGTCCTGTGC...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCTGGGACTGTAAAAGCTaGCGCACGCGCAGTATGTCC +
Preference number: 4 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPWDCKS*RTRSMS
Trigger: GGACATACTGCGCGTGCGCCAGCTTTTACAGTCCCA...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCTCCATGCCTTGTTCGTaGGCTTCCTGCCACTCCCAA +
Preference number: 4 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPSMPCS*ASCHSQ
Trigger: TTGGGAGTGGCAGGAAGCCCACGAACAAGGCATGGA...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp AATTATGGAGCGTGTGTGGAGGTTGGAGGATTCTGGGGACAGACTTCATGTCACTTGGCACCTCTCTCTTaGCCTGCACTGTCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: NYGACVEVGGFWGQTSCHLAPLS*PALSVE
Trigger: CTCCACAGACAGTGCAGGCCAAGAGAGAGGTGCCAA...GTGACATGAAGTCTGTCCCCAGAATCCTCCAACCTCCACACACGCTCCATAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GTGCCAAGACAGGCGAGTGGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTACTCGGCCTTTTCCCTaGAAAGGTCAACATCGTCAT +
Preference number: 4 (lower is better)
Translates to: VPRQASGGQRMTLGGWFFTRPFP*KGQHRH
Trigger: ATGACGATGTTGACCTTTCCAGGGAAAAGGCCGAGT...AAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCCACTCGCCTGTCTTGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCTCTGCAGCACTGGTTTaGACTGTGCTCTGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCISAALV*TVLCLL
Trigger: CAGCAAACAGAGCACAGTCCAAACCAGTGCTGCAGA...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCCCTCAGGGTTGGGCTTaGGGCTTCTTTGATGAAAGT +
Preference number: 4 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCIPQGWA*GFFDES
Trigger: ACTTTCATCAAAGAAGCCCCAAGCCCAACCCTGAGG...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCCAGGCTGTGAGTGAATaGTGTTGTGGAGTGCTGCAC +
Preference number: 4 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPQAVSE*CCGVLH
Trigger: GTGCAGCACTCCACAACATCATTCACTCACAGCCTG...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp GACAAGAGTGATGCACTCAGAGGCAGTGGACATCTTGACTTTCGTATTCCTAAGCTCTGCTTACTCCGGTaGGAGGCCTTGGGACTTAGG +
Preference number: 4 (lower is better)
Translates to: DKSDALRGSGHLDFRIPKLCLLR*EALGLR
Trigger: CCTAAGTCCCAAGGCCTCTCACCGGAGTAAGCAGAG...CTTAGGAATACGAAAGTCAAGATGTCCACTGCCTCTGAGTGCATCACTCTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp GTGCCAAGACAGGCGAGTGGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTGCTTCCTGTGTTGTCTaGTCACATCCTATTTCATCG +
Preference number: 4 (lower is better)
Translates to: VPRQASGGQRMTLGGWFFASCVV*SHPISS
Trigger: CGATGAAATAGGATGTGATCAGACAACACAGGAAGC...AAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCCACTCGCCTGTCTTGGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCGGGAGACTTGGCTCCTaGAGAAAACTCAACAGCTTT +
Preference number: 4 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCIGRLGS*RKLNSF
Trigger: AAAGCTGTTGAGTTTTCTTCAGGAGCCAAGTCTCCC...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCAGCAGTACTGGGAGATaGTGTTCTGGGCAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPSSTGR*CSGQLR
Trigger: TCTCAGCTGCCCAGAACATCATCTCCCAGTACTGCT...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCCTCGGATTTCACGCCTaGCTCTCTTGTCATCAGGCT +
Preference number: 4 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPLGFHA*LSCHQA
Trigger: AGCCTGATGACAAGAGAGGCAGGCGTGAAATCCGAG...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCTGTTCGTGGGCTTCCTaGCACTCCCAACAGGTTTCA +
Preference number: 4 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPCSWAS*HSQQVS
Trigger: TGAAACCTGTTGGGAGTGGCAGGAAGCCCACGAACA...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GTGCCAAGACAGGCGAGTGGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCTGCAGCCTATTCTGTaGTGGCAGAAGTTTATACAC +
Preference number: 4 (lower is better)
Translates to: VPRQASGGQRMTLGGWFFLQPIL*WQKFIH
Trigger: GTGTATAAACTTCTGCCAGCACAGAATAGGCTGCAG...AAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCCACTCGCCTGTCTTGGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp AATTATGGAGCGTGTGTGGAGGTTGGAGGATTCTGGGGACAGACTTCATGTCACCTTCATCTGTCTGGGTaGTGGCATGGAGCTCACATG +
Preference number: 4 (lower is better)
Translates to: NYGACVEVGGFWGQTSCHLHLSG*WHGAHM
Trigger: CATGTGAGCTCCATGCCAGCACCCAGACAGATGAAG...GTGACATGAAGTCTGTCCCCAGAATCCTCCAACCTCCACACACGCTCCATAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GTGCCAAGACAGGCGAGTGGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTACTCTGTCCTGGTTTTaGCTCAGTTCCTTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: VPRQASGGQRMTLGGWFFTLSWF*LSSFLF
Trigger: GAACAGAAAGGAACTGAGGCAAAACCAGGACAGAGT...AAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCCACTCGCCTGTCTTGGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTATGTGGAGTGCTGCACTaGCCCTGGCCCGAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: TRNEREPAVTYIPISHCLCGVLH*PWPEPL
Trigger: AAGAGGCTCGGGCCAGGGCCAGTGCAGCACTCCACA...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp ACCGTCAGCTTCATTCATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATTGTGGAGTGCTGCACTaGCCCTGGCCCGAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: TVSFIHAVKQSRLGKHIHCGVLH*PWPEPL
Trigger: AAGAGGCTCGGGCCAGGGCCAGTGCAGCACTCCACA...ATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATGAATGAAGCTGACGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp AATTATGGAGCGTGTGTGGAGGTTGGAGGATTCTGGGGACAGACTTCATGTCACGTCTGGGTGCTGGCATaGAGCTCACATGCCTTTCAT +
Preference number: 4 (lower is better)
Translates to: NYGACVEVGGFWGQTSCHVWVLA*SSHAFH
Trigger: ATGAAAGGCATGTGAGCTCCATGCCAGCACCCAGAC...GTGACATGAAGTCTGTCCCCAGAATCCTCCAACCTCCACACACGCTCCATAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp GTGCCAAGACAGGCGAGTGGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTTTCCACATGCATTACTaGCTATTGTCAAGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: VPRQASGGQRMTLGGWFFFHMHY*LLSSCE
Trigger: CTCACAGCTTGACAATAGTCAGTAATGCATGTGGAA...AAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCCACTCGCCTGTCTTGGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp GTGCCAAGACAGGCGAGTGGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTAGAATAGGATTCAACTaGGGGTTTCATTTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: VPRQASGGQRMTLGGWFFRIGFN*GFHLAS
Trigger: AGAGGCCAAATGAAACCCTCAGTTGAATCCTATTCT...AAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCCACTCGCCTGTCTTGGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp GTGCCAAGACAGGCGAGTGGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCAAGTAGTGCCTTTTTaGGTCTGGCCATTTCTTTGT +
Preference number: 4 (lower is better)
Translates to: VPRQASGGQRMTLGGWFFQVVPF*VWPFLC
Trigger: ACAAAGAAATGGCCAGACTCAAAAAGGCACTACTTG...AAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCCACTCGCCTGTCTTGGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTAACCACTGGCAGCACCTaGGGAAGCGCTCTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: TRNEREPAVTYIPISHCLTTGST*GSALRS
Trigger: GCTTCTCAGAGCGCTTCCTCAGGTGCTGCCAGTGGT...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp CATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATGGGGAACCACATTACTGCGGTGTTGCTTTCTaGCACTCCGTGGCCTTCGTG +
Preference number: 4 (lower is better)
Translates to: HAVKQSRLGKHIHGEPHYCGVAF*HSVAFV
Trigger: CACGAAGGCCACGGAGTGGCAGAAAGCAACACCGCA...GTAATGTGGTTCCCCATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079362.13
CDS-3UTR GCA 90 bp GACAAGAGTGATGCACTCAGAGGCAGTGGACATCTTGACTTTCGTATTCCTAAGCGCACTCCTGTCGTCTaGCACACAATGGAACTCGGT +
Preference number: 4 (lower is better)
Translates to: DKSDALRGSGHLDFRIPKRTPVV*HTMELG
Trigger: ACCGAGTTCCATTGTGTGGCAGACGACAGGAGTGCG...CTTAGGAATACGAAAGTCAAGATGTCCACTGCCTCTGAGTGCATCACTCTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCAGCATTCTGGGACACTaGTGGAACTTCAGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPSILGH*WNFSCR
Trigger: CCTGCAACTGAAGTTCCAGCAGTGTCCCAGAATGCT...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GACAAGAGTGATGCACTCAGAGGCAGTGGACATCTTGACTTTCGTATTCCTAAGGAGGGGTTTTGCTTCTaGTTGGTGGCATGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: DKSDALRGSGHLDFRIPKEGFCF*LVAWSA
Trigger: GGCAGACCATGCCACCAAGCAGAAGCAAAACCCCTC...CTTAGGAATACGAAAGTCAAGATGTCCACTGCCTCTGAGTGCATCACTCTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GACAAGAGTGATGCACTCAGAGGCAGTGGACATCTTGACTTTCGTATTCCTAAGGAGGTGGAGGGGTTTTaGTTCTGCTTGGTGGCATGG +
Preference number: 4 (lower is better)
Translates to: DKSDALRGSGHLDFRIPKEVEGF*FCLVAW
Trigger: CCATGCCACCAAGCAGAAGCAAAACCCCTCCACCTC...CTTAGGAATACGAAAGTCAAGATGTCCACTGCCTCTGAGTGCATCACTCTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GTGCCAAGACAGGCGAGTGGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTAATCCTTGCTTTCTTTaGCCTTTCTTAACTCGGCCT +
Preference number: 4 (lower is better)
Translates to: VPRQASGGQRMTLGGWFFNPCFL*PFLTRP
Trigger: AGGCCGAGTTAAGAAAGGGCAAAGAAAGCAAGGATT...AAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCCACTCGCCTGTCTTGGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCCACTGGTTTGGACTGTaGTCTGTTTGCTGGATGTTT +
Preference number: 4 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCIHWFGL*SVCWMF
Trigger: AAACATCCAGCAAACAGAGCACAGTCCAAACCAGTG...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTGGGAGCATACCCGGATaGCTGAGGCTTACTGGGCTC +
Preference number: 4 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSGSIPG*LRLTGL
Trigger: GAGCCCAGTAAGCCTCAGGCATCCGGGTATGCTCCC...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCTGTGAATCATCGTCCTaGCTCTTGAGATTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCICESSS*LLRLKA
Trigger: TGCCTTCAATCTCAAGAGGCAGGACGATGATTCACA...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCTTTAGAGACAGGAGGTaGCATCTGATAGATCAGAGG +
Preference number: 4 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCIFRDRR*HLIDQR
Trigger: CCTCTGATCTATCAGATGGCACCTCCTGTCTCTAAA...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCACTCTGTCCTGGTTTTaGCTCAGTTCCTTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCITLSWF*LSSFLF
Trigger: GAACAGAAAGGAACTGAGGCAAAACCAGGACAGAGT...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTCGCTTCTCCATGTCCTaGCAGGTGCCAAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSRFSMS*QVPSCS
Trigger: GGAGCAGCTTGGCACCTGCCAGGACATGGAGAAGCG...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp ACCGTCAGCTTCATTCATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATCGCTTCTCCATGTCCTaGCAGGTGCCAAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: TVSFIHAVKQSRLGKHIHRFSMS*QVPSCS
Trigger: GGAGCAGCTTGGCACCTGCCAGGACATGGAGAAGCG...ATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATGAATGAAGCTGACGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGGTGCTGCACTGGCCCTaGCCCGAGCCTCTTTACTGC +
Preference number: 4 (lower is better)
Translates to: STKNSIIHRTYSRKDASMVLHWP*PEPLYC
Trigger: GCAGTAAAGAGGCTCGGGCCAGGGCCAGTGCAGCAC...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GTGCCAAGACAGGCGAGTGGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTTTGTTTCTGAACCACTaGTTCCCCTTGACCTATATG +
Preference number: 4 (lower is better)
Translates to: VPRQASGGQRMTLGGWFFLFLNH*FPLTYM
Trigger: CATATAGGTCAAGGGGAACCAGTGGTTCAGAAACAA...AAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCCACTCGCCTGTCTTGGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp AATTATGGAGCGTGTGTGGAGGTTGGAGGATTCTGGGGACAGACTTCATGTCACGTTCTGGGGGACTTTTaGGTGTCTGAGCACCACTTT +
Preference number: 4 (lower is better)
Translates to: NYGACVEVGGFWGQTSCHVLGDF*VSEHHF
Trigger: AAAGTGGTGCTCAGACACCCAAAAGTCCCCCAGAAC...GTGACATGAAGTCTGTCCCCAGAATCCTCCAACCTCCACACACGCTCCATAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GTGCCAAGACAGGCGAGTGGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTATCTTTCTGTATAAATaGCTCATCCAGGCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: VPRQASGGQRMTLGGWFFIFLYK*LIQAQS
Trigger: GCTCTGAGCCTGGATGAGCCATTTATACAGAAAGAT...AAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCCACTCGCCTGTCTTGGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCGCGGCTGCAGCAGCTTaGTGCAAACTACTTACTATG +
Preference number: 4 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPAAAAA*CKLLTM
Trigger: CATAGTAAGTAGTTTGCACCAAGCTGCTGCAGCCGC...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCACTTGCTTTAACAACTaGTCATATGAAGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCITCFNN*SYEAAA
Trigger: GGCTGCAGCTTCATATGATCAGTTGTTAAAGCAAGT...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp GACAAGAGTGATGCACTCAGAGGCAGTGGACATCTTGACTTTCGTATTCCTAAGAGGACTGCATTCTCCTaGACGGCTGGATACAGATCC +
Preference number: 4 (lower is better)
Translates to: DKSDALRGSGHLDFRIPKRTAFS*TAGYRS
Trigger: GGATCTGTATCCAGCCGTTCAGGAGAATGCAGTCCT...CTTAGGAATACGAAAGTCAAGATGTCCACTGCCTCTGAGTGCATCACTCTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp GACAAGAGTGATGCACTCAGAGGCAGTGGACATCTTGACTTTCGTATTCCTAAGCCTCCATTGCAGCCCTaGTCTGCCTTGCTTCATACT +
Preference number: 4 (lower is better)
Translates to: DKSDALRGSGHLDFRIPKPPLQP*SALLHT
Trigger: AGTATGAAGCAAGGCAGATCAGGGCTGCAATGGAGG...CTTAGGAATACGAAAGTCAAGATGTCCACTGCCTCTGAGTGCATCACTCTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp ACCGTCAGCTTCATTCATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATGCATCATGCCTGCTCTaGGATGACCTCTCCGCTTCC +
Preference number: 4 (lower is better)
Translates to: TVSFIHAVKQSRLGKHIHASCLL*DDLSAS
Trigger: GGAAGCGGAGAGGTCATCTCAGAGCAGGCATGATGC...ATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATGAATGAAGCTGACGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079362.13
CDS-3UTR TCA 90 bp GACAAGAGTGATGCACTCAGAGGCAGTGGACATCTTGACTTTCGTATTCCTAAGACACTGGCTGTTTCGTaGTCCACACGTGTAGCTGGA +
Preference number: 4 (lower is better)
Translates to: DKSDALRGSGHLDFRIPKTLAVS*STRVAG
Trigger: TCCAGCTACACGTGTGGATCACGAAACAGCCAGTGT...CTTAGGAATACGAAAGTCAAGATGTCCACTGCCTCTGAGTGCATCACTCTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp AATTATGGAGCGTGTGTGGAGGTTGGAGGATTCTGGGGACAGACTTCATGTCACTCATCAGGCTGTGAGTaGATGATGTTGTGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: NYGACVEVGGFWGQTSCHSSGCE*MMLWSA
Trigger: AGCACTCCACAACATCATTCACTCACAGCCTGATGA...GTGACATGAAGTCTGTCCCCAGAATCCTCCAACCTCCACACACGCTCCATAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp AATTATGGAGCGTGTGTGGAGGTTGGAGGATTCTGGGGACAGACTTCATGTCACGAAGTTGTATGTGTTTaGGTGTGTGTGGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: NYGACVEVGGFWGQTSCHEVVCV*VCVGGR
Trigger: TCTGCCTCCCACACACACTCAAACACATACAACTTC...GTGACATGAAGTCTGTCCCCAGAATCCTCCAACCTCCACACACGCTCCATAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCAGAATAGGATTCAACTaGGGGTTTCATTTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCIRIGFN*GFHLAS
Trigger: AGAGGCCAAATGAAACCCTCAGTTGAATCCTATTCT...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp AATTATGGAGCGTGTGTGGAGGTTGGAGGATTCTGGGGACAGACTTCATGTCACGCCATTTCTTTGTGCTaGACTTGGACGCAGCTGATT +
Preference number: 4 (lower is better)
Translates to: NYGACVEVGGFWGQTSCHAISLC*TWTQLI
Trigger: AATCAGCTGCGTCCAAGTTCAGCACAAAGAAATGGC...GTGACATGAAGTCTGTCCCCAGAATCCTCCAACCTCCACACACGCTCCATAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAAAGCTGCCTGCTGGCTTaGGTTTGGTTCTGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPESCLLA*VWFWAA
Trigger: TGCCGCCCAGAACCAAACTCAAGCCAGCAGGCAGCT...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp GTGCCAAGACAGGCGAGTGGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTAGAAAGAATAGAAGATaGGCTTCCAGTTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: VPRQASGGQRMTLGGWFFRKNRR*ASSSSP
Trigger: TGGAGAAGAACTGGAAGCTCATCTTCTATTCTTTCT...AAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCCACTCGCCTGTCTTGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp ACCGTCAGCTTCATTCATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATCCATGTCCTGGCAGGTaGCAAGCTGCTCCTCCATTG +
Preference number: 4 (lower is better)
Translates to: TVSFIHAVKQSRLGKHIHPCPGR*QAAPPL
Trigger: CAATGGAGGAGCAGCTTGGCACCTGCCAGGACATGG...ATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATGAATGAAGCTGACGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp CATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATGGGGAACCACATTACAGGACCTGCACCCTCTaGACGGCAGCATTTACAGCA +
Preference number: 4 (lower is better)
Translates to: HAVKQSRLGKHIHGEPHYRTCTL*TAAFTA
Trigger: TGCTGTAAATGCTGCCGTGCAGAGGGTGCAGGTCCT...GTAATGTGGTTCCCCATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GACAAGAGTGATGCACTCAGAGGCAGTGGACATCTTGACTTTCGTATTCCTAAGCGCTCTGAGAAGCCATaGCTGTGGGAGAAATGTCAC +
Preference number: 4 (lower is better)
Translates to: DKSDALRGSGHLDFRIPKRSEKP*LWEKCH
Trigger: GTGACATTTCTCCCACAGGCATGGCTTCTCAGAGCG...CTTAGGAATACGAAAGTCAAGATGTCCACTGCCTCTGAGTGCATCACTCTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp CTGAATTTCCCTTTCCATAGCCTCTTACTGCCCATCGAAACTAAGTATTTTAAGACGGCCGGGCTGAAGTaGTGTCTGCGCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LNFPFHSLLLPIETKYFKTAGLK*CLRCSS
Trigger: GGAAGAGCAGCGCAGACAGCACTTCAGCCCGGCCGT...CTTAAAATACTTAGTTTCGATGGGCAGTAAGAGGCTATGGAAAGGGAAATTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCCTCCACTGGATTCTGTaGTGTCAGTCTTCGAATCTC +
Preference number: 4 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPLHWIL*CQSSNL
Trigger: GAGATTCGAAGACTGACAGCACAGAATCCAGTGGAG...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp AATTATGGAGCGTGTGTGGAGGTTGGAGGATTCTGGGGACAGACTTCATGTCACCTCCACTGGATTCTGTaGTGTCAGTCTTCGAATCTC +
Preference number: 4 (lower is better)
Translates to: NYGACVEVGGFWGQTSCHLHWIL*CQSSNL
Trigger: GAGATTCGAAGACTGACAGCACAGAATCCAGTGGAG...GTGACATGAAGTCTGTCCCCAGAATCCTCCAACCTCCACACACGCTCCATAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp AATTATGGAGCGTGTGTGGAGGTTGGAGGATTCTGGGGACAGACTTCATGTCACCTATTTGCTGGATCCTaGCTATTCTTCGCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: NYGACVEVGGFWGQTSCHLFAGS*LFFAVH
Trigger: GTGCACAGCGAAGAATAGCCAGGATCCAGCAAATAG...GTGACATGAAGTCTGTCCCCAGAATCCTCCAACCTCCACACACGCTCCATAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp CTGAATTTCCCTTTCCATAGCCTCTTACTGCCCATCGAAACTAAGTATTTTAAGGTGCTGCACTGGCCCTaGCCCGAGCCTCTTTACTGC +
Preference number: 4 (lower is better)
Translates to: LNFPFHSLLLPIETKYFKVLHWP*PEPLYC
Trigger: GCAGTAAAGAGGCTCGGGCCAGGGCCAGTGCAGCAC...CTTAAAATACTTAGTTTCGATGGGCAGTAAGAGGCTATGGAAAGGGAAATTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GTGCCAAGACAGGCGAGTGGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTTATCATCATGTCGATTaGCGTCAAAAGCATAGTCAC +
Preference number: 4 (lower is better)
Translates to: VPRQASGGQRMTLGGWFFYHHVD*RQKHSH
Trigger: GTGACTATGCTTTTGACGCCAATCGACATGATGATA...AAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCCACTCGCCTGTCTTGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCGCACTGTGTATCTTATaGGCTAGGTCAGCTGGATAC +
Preference number: 4 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPALCIL*ARSAGY
Trigger: GTATCCAGCTGACCTAGCCCATAAGATACACAGTGC...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GTGCCAAGACAGGCGAGTGGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTTTCTATCACATGCTTTaGTCTTGCCCACCTTTCATT +
Preference number: 4 (lower is better)
Translates to: VPRQASGGQRMTLGGWFFFYHML*SCPPFI
Trigger: AATGAAAGGTGGGCAAGACCAAAGCATGTGATAGAA...AAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCCACTCGCCTGTCTTGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCTCAGAGCACTTAGGCTaGAGGAACAAGAAAACCCGT +
Preference number: 4 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPSEHLG*RNKKTR
Trigger: ACGGGTTTTCTTGTTCCTCCAGCCTAAGTGCTCTGA...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCTTTGACCCACTGATTTaGGAAGTTTGCCTGGTGATA +
Preference number: 4 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCIFDPLI*EVCLVI
Trigger: TATCACCAGGCAAACTTCCCAAATCAGTGGGTCAAA...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp AATTATGGAGCGTGTGTGGAGGTTGGAGGATTCTGGGGACAGACTTCATGTCACCCTGGTGGGAGAATCTaGTCTAGAAGATGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: NYGACVEVGGFWGQTSCHPGGRI*SRRWRK
Trigger: CTTTCTCCATCTTCTAGACCAGATTCTCCCACCAGG...GTGACATGAAGTCTGTCCCCAGAATCCTCCAACCTCCACACACGCTCCATAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp CATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATGGGGAACCACATTACCCTCCATTGCAGCCCTaGTCTGCCTTGCTTCATACT +
Preference number: 4 (lower is better)
Translates to: HAVKQSRLGKHIHGEPHYPPLQP*SALLHT
Trigger: AGTATGAAGCAAGGCAGATCAGGGCTGCAATGGAGG...GTAATGTGGTTCCCCATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp CCTGTGTTGTCTGATCACATCCTATTTCATCGTCAGCTGATGACAGTGATGATAACAGCAGGACAGATCTaGTGCTCAACAGGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: PVLSDHILFHRQLMTVMITAGQI*CSTGAG
Trigger: GCCAGCTCCTGTTGAGCATCAGATCTGTCCTGCTGT...TATCATCACTGTCATCAGCTGACGATGAAATAGGATGTGATCAGACAACACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
CDS-3UTR TCA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTATCTGGCTCCGGTAAGTaGGGGTGCCAACCAGAAATG +
Preference number: 4 (lower is better)
Translates to: TRNEREPAVTYIPISHCLSGSGK*GCQPEM
Trigger: CATTTCTGGTTGGCACCCTCACTTACCGGAGCCAGA...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGCTCTGCTTACTCCGGTaGGAGGCCTTGGGACTTAGG +
Preference number: 4 (lower is better)
Translates to: STKNSIIHRTYSRKDASMLCLLR*EALGLR
Trigger: CCTAAGTCCCAAGGCCTCTCACCGGAGTAAGCAGAG...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCGGAGGTATGAATGGCTaGTACTTCTTCCATAACTTT +
Preference number: 4 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCIGGMNG*YFFHNF
Trigger: AAAGTTATGGAAGAAGTATCAGCCATTCATACCTCC...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCGAGATTTTTCCTCGCTaGGCATCATCTGTACTTCTG +
Preference number: 4 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPEIFPR*ASSVLL
Trigger: CAGAAGTACAGATGATGCTCAGCGAGGAAAAATCTC...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp AATTATGGAGCGTGTGTGGAGGTTGGAGGATTCTGGGGACAGACTTCATGTCACGAGTTTGCGCCTTCCTaGATAGCTTTCCAGTCAAAA +
Preference number: 4 (lower is better)
Translates to: NYGACVEVGGFWGQTSCHEFAPS*IAFQSK
Trigger: TTTTGACTGGAAAGCTATTCAGGAAGGCGCAAACTC...GTGACATGAAGTCTGTCCCCAGAATCCTCCAACCTCCACACACGCTCCATAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp CATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATGGGGAACCACATTACGATGTTCTGGGCAGCTaGGACAGTTTGTTAGGAGGG +
Preference number: 4 (lower is better)
Translates to: HAVKQSRLGKHIHGEPHYDVLGS*DSLLGG
Trigger: CCCTCCTAACAAACTGTCTCAGCTGCCCAGAACATC...GTAATGTGGTTCCCCATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp CTGAATTTCCCTTTCCATAGCCTCTTACTGCCCATCGAAACTAAGTATTTTAAGACCACTGGCAGCACCTaGGGAAGCGCTCTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: LNFPFHSLLLPIETKYFKTTGST*GSALRS
Trigger: GCTTCTCAGAGCGCTTCCTCAGGTGCTGCCAGTGGT...CTTAAAATACTTAGTTTCGATGGGCAGTAAGAGGCTATGGAAAGGGAAATTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTCCCGAGCCTCTTTACTaGCCCGGGAATTTCCCAACA +
Preference number: 4 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSPEPLY*PGNFPT
Trigger: TGTTGGGAAATTCCCGGGGCAGTAAAGAGGCTCGGG...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GACAAGAGTGATGCACTCAGAGGCAGTGGACATCTTGACTTTCGTATTCCTAAGCAGCCTTATTCTCAGTaGAGTGTGCAGACAGGTTCC +
Preference number: 4 (lower is better)
Translates to: DKSDALRGSGHLDFRIPKQPYSQ*SVQTGS
Trigger: GGAACCTGTCTGCACACTGCACTGAGAATAAGGCTG...CTTAGGAATACGAAAGTCAAGATGTCCACTGCCTCTGAGTGCATCACTCTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCGGTGTTCTGGCTTCTTaGTTGTCTTTGCTCGTTTTG +
Preference number: 4 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPGVLAS*LSLLVL
Trigger: CAAAACGAGCAAAGACAAGCAAGAAGCCAGAACACC...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GTGCCAAGACAGGCGAGTGGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTATTCTCTTTTACTTCTaGTGTCTGCAGAGTATTAGC +
Preference number: 4 (lower is better)
Translates to: VPRQASGGQRMTLGGWFFILFYF*CLQSIS
Trigger: GCTAATACTCTGCAGACAGCAGAAGTAAAAGAGAAT...AAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCCACTCGCCTGTCTTGGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp AATTATGGAGCGTGTGTGGAGGTTGGAGGATTCTGGGGACAGACTTCATGTCACGCTAACATGTTTTTGTaGCTGCAGCCTATTCTGTGC +
Preference number: 4 (lower is better)
Translates to: NYGACVEVGGFWGQTSCHANMFL*LQPILC
Trigger: GCACAGAATAGGCTGCAGGCACAAAAACATGTTAGC...GTGACATGAAGTCTGTCCCCAGAATCCTCCAACCTCCACACACGCTCCATAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCATTCAGTCCTTTAGATaGCGACTCACTTCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPIQSFR*RLTSGD
Trigger: ATCCCCAGAAGTGAGTCGGCATCTAAAGGACTGAAT...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp AATTATGGAGCGTGTGTGGAGGTTGGAGGATTCTGGGGACAGACTTCATGTCACTTTAGAGACAGGAGGTaGCATCTGATAGATCAGAGG +
Preference number: 4 (lower is better)
Translates to: NYGACVEVGGFWGQTSCHFRDRR*HLIDQR
Trigger: CCTCTGATCTATCAGATGGCACCTCCTGTCTCTAAA...GTGACATGAAGTCTGTCCCCAGAATCCTCCAACCTCCACACACGCTCCATAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GTAAGAGCTAAAAGAGCCTTTGTGACAGTTAAGAATCAGAAGCATGTCTTTGTCTGCCGGCCAGCTTCATaGGAGGCAGCATCATGCCTG +
Preference number: 4 (lower is better)
Translates to: VRAKRAFVTVKNQKHVFVCRPAS*EAASCL
Trigger: CAGGCATGATGCTGCCTCCCATGAAGCTGGCCGGCA...GACAAAGACATGCTTCTGATTCTTAACTGTCACAAAGGCTCTTTTAGCTCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066133.7
CDS-3UTR CCA 90 bp CTGAATTTCCCTTTCCATAGCCTCTTACTGCCCATCGAAACTAAGTATTTTAAGTGCCGGCCAGCTTCATaGGAGGCAGCATCATGCCTG +
Preference number: 4 (lower is better)
Translates to: LNFPFHSLLLPIETKYFKCRPAS*EAASCL
Trigger: CAGGCATGATGCTGCCTCCCATGAAGCTGGCCGGCA...CTTAAAATACTTAGTTTCGATGGGCAGTAAGAGGCTATGGAAAGGGAAATTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079362.13
CDS-3UTR CCA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTTCCATGCCTTGTTCGTaGGCTTCCTGCCACTCCCAA +
Preference number: 4 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSSMPCS*ASCHSQ
Trigger: TTGGGAGTGGCAGGAAGCCCACGAACAAGGCATGGA...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCTTCTATCACATGCTTTaGTCTTGCCCACCTTTCATT +
Preference number: 4 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCIFYHML*SCPPFI
Trigger: AATGAAAGGTGGGCAAGACCAAAGCATGTGATAGAA...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCCTGGAGTACTTTCTGTaGCGAAGTGTAACAAAGTAT +
Preference number: 4 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCILEYFL*RSVTKY
Trigger: ATACTTTGTTACACTTCGCCACAGAAAGTACTCCAG...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp AATTATGGAGCGTGTGTGGAGGTTGGAGGATTCTGGGGACAGACTTCATGTCACCAGCCTATTCTGTGCTaGCAGAAGTTTATACACAGG +
Preference number: 4 (lower is better)
Translates to: NYGACVEVGGFWGQTSCHQPILC*QKFIHR
Trigger: CCTGTGTATAAACTTCTGCCAGCACAGAATAGGCTG...GTGACATGAAGTCTGTCCCCAGAATCCTCCAACCTCCACACACGCTCCATAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp ACCGTCAGCTTCATTCATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATCCGTCTTTGGAGGACTaGGGGAAAGTGGGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: TVSFIHAVKQSRLGKHIHPSLED*GKVGCF
Trigger: GAAACAGCCCACTTTCCCCCAGTCCTCCAAAGACGG...ATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATGAATGAAGCTGACGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp AATTATGGAGCGTGTGTGGAGGTTGGAGGATTCTGGGGACAGACTTCATGTCACTTGGTAAGATTTTGTTaGCTCAGCTGTCTACCTGGG +
Preference number: 4 (lower is better)
Translates to: NYGACVEVGGFWGQTSCHLVRFC*LSCLPG
Trigger: CCCAGGTAGACAGCTGAGCCAACAAAATCTTACCAA...GTGACATGAAGTCTGTCCCCAGAATCCTCCAACCTCCACACACGCTCCATAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAATGGATTCAGCACCACTaGCAGCACCTGAGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPEWIQHH*QHLRKR
Trigger: GCGCTTCCTCAGGTGCTGCCAGTGGTGCTGAATCCA...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp CAGAAAGTAAGAGCTAAAAGAGCCTTTGTGACAGTTAAGAATCAGAAGCATGTCGCATCATGCCTGCTCTaGGATGACCTCTCCGCTTCC +
Preference number: 4 (lower is better)
Translates to: QKVRAKRAFVTVKNQKHVASCLL*DDLSAS
Trigger: GGAAGCGGAGAGGTCATCTCAGAGCAGGCATGATGC...GACATGCTTCTGATTCTTAACTGTCACAAAGGCTCTTTTAGCTCTTACTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066133.7
CDS-3UTR TCA 90 bp CATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATGGGGAACCACATTACACCTTTGTCCCCAGATaGCTTGTCAACCTTCGAGGA +
Preference number: 4 (lower is better)
Translates to: HAVKQSRLGKHIHGEPHYTFVPR*LVNLRG
Trigger: TCCTCGAAGGTTGACAAGTCATCTGGGGACAAAGGT...GTAATGTGGTTCCCCATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp ACCGTCAGCTTCATTCATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATCTACATGGCTCACTCTaGACAGAGCTGGCAATGGAG +
Preference number: 4 (lower is better)
Translates to: TVSFIHAVKQSRLGKHIHLHGSL*TELAME
Trigger: CTCCATTGCCAGCTCTGTTCAGAGTGAGCCATGTAG...ATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATGAATGAAGCTGACGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp ATGGGAATTTCGTCTCCAATAGGTGGAATGGACTCTTCTTTTACTTCTAACATTGCATACCCGGATGCCTaGGGCTTACTGGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: MGISSPIGGMDSSFTSNIAYPDA*GLLGSP
Trigger: AGGAGAGCCCAGTAAGCCTCAGGCATCCGGGTATGC...AATGTTAGAAGTAAAAGAAGAGTCCATTCCACCTATTGGAGACGAAATTCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTTCTACCAGGGGAAATTaGGTTTCGCCCTGGAGACTG +
Preference number: 4 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSSTRGN*VSPWRL
Trigger: CAGTCTCCAGGGCGAAACTCAATTTCCCCTGGTAGA...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTAGATGTTCTGGGCAGCTaGGACAGTTTGTTAGGAGGG +
Preference number: 4 (lower is better)
Translates to: TRNEREPAVTYIPISHCLDVLGS*DSLLGG
Trigger: CCCTCCTAACAAACTGTCTCAGCTGCCCAGAACATC...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCTTCTACCTTTTTATTTaGCCCATTGCCGTTACTCAT +
Preference number: 4 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCIFYLFI*PIAVTH
Trigger: ATGAGTAACGGCAATGGGTCAAATAAAAAGGTAGAA...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTTGGAGCTACTGGAACTaGAAGGGGTACGCTCTGCTA +
Preference number: 4 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSWSYWN*KGYALL
Trigger: TAGCAGAGCGTACCCCTTTCAGTTCCAGTAGCTCCA...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGAAGCTGCTCCTCCATTaGAGCCCTGATCTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: STKNSIIHRTYSRKDASMKLLLH*SPDLPC
Trigger: GCAAGGCAGATCAGGGCTGCAATGGAGGAGCAGCTT...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GTATACCAGAAAGTAAGAGCTAAAAGAGCCTTTGTGACAGTTAAGAATCAGAAGTGGCAGGTGCCAAGCTaGTCCTCCATTGCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: VYQKVRAKRAFVTVKNQKWQVPS*SSIAAL
Trigger: CAGGGCTGCAATGGAGGAGCAGCTTGGCACCTGCCA...CTTCTGATTCTTAACTGTCACAAAGGCTCTTTTAGCTCTTACTTTCTGGTATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066133.7
CDS-3UTR GCA 90 bp CAGAAAGTAAGAGCTAAAAGAGCCTTTGTGACAGTTAAGAATCAGAAGCATGTCCCATGTCCTGGCAGGTaGCAAGCTGCTCCTCCATTG +
Preference number: 4 (lower is better)
Translates to: QKVRAKRAFVTVKNQKHVPCPGR*QAAPPL
Trigger: CAATGGAGGAGCAGCTTGGCACCTGCCAGGACATGG...GACATGCTTCTGATTCTTAACTGTCACAAAGGCTCTTTTAGCTCTTACTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066133.7
CDS-3UTR GCA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACCATGTCCTGGCAGGTaGCAAGCTGCTCCTCCATTG +
Preference number: 4 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVPCPGR*QAAPPL
Trigger: CAATGGAGGAGCAGCTTGGCACCTGCCAGGACATGG...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCATGTCCTTTTCTATTTaGTGGATCCTGGCTATTCTT +
Preference number: 4 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCIMSFSI*WILAIL
Trigger: AAGAATAGCCAGGATCCAGCAAATAGAAAAGGACAT...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp CAGAAAGTAAGAGCTAAAAGAGCCTTTGTGACAGTTAAGAATCAGAAGCATGTCTGCGGTGTTGCTTTCTaGCACTCCGTGGCCTTCGTG +
Preference number: 4 (lower is better)
Translates to: QKVRAKRAFVTVKNQKHVCGVAF*HSVAFV
Trigger: CACGAAGGCCACGGAGTGGCAGAAAGCAACACCGCA...GACATGCTTCTGATTCTTAACTGTCACAAAGGCTCTTTTAGCTCTTACTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066133.7
CDS-3UTR GCA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTACTTCGAGGAGCAGAGTaGGTGCCGCTAGAACTCAAA +
Preference number: 4 (lower is better)
Translates to: TRNEREPAVTYIPISHCLLRGAE*VPLELK
Trigger: TTTGAGTTCTAGCGGCACGCACTCTGCTCCTCGAAG...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTTGTTCGTGGGCTTCCTaGCACTCCCAACAGGTTTCA +
Preference number: 4 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSCSWAS*HSQQVS
Trigger: TGAAACCTGTTGGGAGTGGCAGGAAGCCCACGAACA...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp CATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATGGGGAACCACATTACTTTGGCTATCTGGGCTaGAGTGGTAGTGATCTGCAG +
Preference number: 4 (lower is better)
Translates to: HAVKQSRLGKHIHGEPHYFGYLG*SGSDLQ
Trigger: CTGCAGATCACTACCACTGCAGCCCAGATAGCCAAA...GTAATGTGGTTCCCCATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCTTTACTTCTGCTGTCTaGAGAGTATTAGCAGAATCT +
Preference number: 4 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCIFTSAV*RVLAES
Trigger: AGATTCTGCTAATACTCTGCAGACAGCAGAAGTAAA...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAAGAGGGGTTTTGCTTCTaGTTGGTGGCATGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPEEGFCF*LVAWSA
Trigger: GGCAGACCATGCCACCAAGCAGAAGCAAAACCCCTC...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GACAAGAGTGATGCACTCAGAGGCAGTGGACATCTTGACTTTCGTATTCCTAAGGGCCTACTTAATGGTTaGTGTGTAGGTCTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: DKSDALRGSGHLDFRIPKGLLNG*CVGLEG
Trigger: TCCCTCAAGACCTACACAGCAACCATTAAGTAGGCC...CTTAGGAATACGAAAGTCAAGATGTCCACTGCCTCTGAGTGCATCACTCTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp ACCGTCAGCTTCATTCATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATCGCTCTGAGAAGCCATaGCTGTGGGAGAAATGTCAC +
Preference number: 4 (lower is better)
Translates to: TVSFIHAVKQSRLGKHIHRSEKP*LWEKCH
Trigger: GTGACATTTCTCCCACAGGCATGGCTTCTCAGAGCG...ATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATGAATGAAGCTGACGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGGCACAGGACTGCCACTaGCCACACTCTGTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: STKNSIIHRTYSRKDASMAQDCH*PHSVSH
Trigger: ATGGGAAACAGAGTGTGGGCAGTGGCAGTCCTGTGC...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTATTGGGAATGACCCCATaGGGACAGGACTGCATTCTC +
Preference number: 4 (lower is better)
Translates to: TRNEREPAVTYIPISHCLLGMTP*GQDCIL
Trigger: GAGAATGCAGTCCTGTCCCCATGGGGTCATTCCCAA...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GACAAGAGTGATGCACTCAGAGGCAGTGGACATCTTGACTTTCGTATTCCTAAGTTGGCTCTAGCATTCTaGGACACTGCTGGAACTTCA +
Preference number: 4 (lower is better)
Translates to: DKSDALRGSGHLDFRIPKLALAF*DTAGTS
Trigger: TGAAGTTCCAGCAGTGTCCCAGAATGCTAGAGCCAA...CTTAGGAATACGAAAGTCAAGATGTCCACTGCCTCTGAGTGCATCACTCTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GACAAGAGTGATGCACTCAGAGGCAGTGGACATCTTGACTTTCGTATTCCTAAGTCAGAGCACTTAGGCTaGAGGAACAAGAAAACCCGT +
Preference number: 4 (lower is better)
Translates to: DKSDALRGSGHLDFRIPKSEHLG*RNKKTR
Trigger: ACGGGTTTTCTTGTTCCTCCAGCCTAAGTGCTCTGA...CTTAGGAATACGAAAGTCAAGATGTCCACTGCCTCTGAGTGCATCACTCTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp AATTATGGAGCGTGTGTGGAGGTTGGAGGATTCTGGGGACAGACTTCATGTCACATCTTTCTGTATAAATaGCTCATCCAGGCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: NYGACVEVGGFWGQTSCHIFLYK*LIQAQS
Trigger: GCTCTGAGCCTGGATGAGCCATTTATACAGAAAGAT...GTGACATGAAGTCTGTCCCCAGAATCCTCCAACCTCCACACACGCTCCATAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCGTCGAGGATGCTTGTTaGACTTGGTCCATTATCTTT +
Preference number: 4 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPVEDAC*TWSIIF
Trigger: AAAGATAATGGACCAAGTCCAACAAGCATCCTCGAC...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGCCGTCTTTGGAGGACTaGGGGAAAGTGGGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: STKNSIIHRTYSRKDASMPSLED*GKVGCF
Trigger: GAAACAGCCCACTTTCCCCCAGTCCTCCAAAGACGG...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTATGCCTGAGGCTTACTaGGCTCTCCTTGTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSMPEAY*ALLVSW
Trigger: CCAACTCACAAGGAGAGCCCAGTAAGCCTCAGGCAT...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GACAAGAGTGATGCACTCAGAGGCAGTGGACATCTTGACTTTCGTATTCCTAAGTGGGAGATGATGTTCTaGGCAGCTGAGACAGTTTGT +
Preference number: 4 (lower is better)
Translates to: DKSDALRGSGHLDFRIPKWEMMF*AAETVC
Trigger: ACAAACTGTCTCAGCTGCCCAGAACATCATCTCCCA...CTTAGGAATACGAAAGTCAAGATGTCCACTGCCTCTGAGTGCATCACTCTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp AATTATGGAGCGTGTGTGGAGGTTGGAGGATTCTGGGGACAGACTTCATGTCACTTCTGGGGATACTGCTaGCATTCTTGGATAAACTTG +
Preference number: 4 (lower is better)
Translates to: NYGACVEVGGFWGQTSCHFWGYC*HSWINL
Trigger: CAAGTTTATCCAAGAATGCCAGCAGTATCCCCAGAA...GTGACATGAAGTCTGTCCCCAGAATCCTCCAACCTCCACACACGCTCCATAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp CATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATGGGGAACCACATTACATGCCGACTCACTTCTaGGGATACTGCTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: HAVKQSRLGKHIHGEPHYMPTHF*GYCWHS
Trigger: AGAATGCCAGCAGTATCCCCAGAAGTGAGTCGGCAT...GTAATGTGGTTCCCCATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR CAA 72 bp GGGACAAGAGTGATGCACTCAGAGGCAGTGGACATCTaGACTTTCGTATTCCTAAGTATGGTGAGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: GTRVMHSEAVDI*TFVFLSMVSFL
Trigger: GAGGAAACTCACCATACTTAGGAATACGAAAGTCAAGATGTCCACTGCCTCTGAGTGCATCACTCTTGTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR CAA 72 bp ATCCTTCCCGACTTCCGTAGGAGCGAAGGGACATTTTaGAGCGTAGTTTCACTCCGGGGAAATTACTATCTA +
Preference number: 4 (lower is better)
Translates to: ILPDFRRSEGTF*SVVSLRGNYYL
Trigger: TAGATAGTAATTTCCCCGGAGTGAAACTACGCTCAAAAATGTCCCTTCGCTCCTACGGAAGTCGGGAAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163295.2
CDS-3UTR TCA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTACCTTTGTCCCCAGATaGCTTGTCAACCTTCGAGGA +
Preference number: 4 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSTFVPR*LVNLRG
Trigger: TCCTCGAAGGTTGACAAGTCATCTGGGGACAAAGGT...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCTTTAGGATTTCTTGCTaGGAGATTCCACAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPFRISC*EIPQSS
Trigger: GGAACTTTGTGGAATCTCTCAGCAAGAAATCCTAAA...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp CATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATGGGGAACCACATTACGAAGTTGTATGTGTTTaGGTGTGTGTGGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: HAVKQSRLGKHIHGEPHYEVVCV*VCVGGR
Trigger: TCTGCCTCCCACACACACTCAAACACATACAACTTC...GTAATGTGGTTCCCCATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGCTACATGGCTCACTCTaGACAGAGCTGGCAATGGAG +
Preference number: 4 (lower is better)
Translates to: STKNSIIHRTYSRKDASMLHGSL*TELAME
Trigger: CTCCATTGCCAGCTCTGTTCAGAGTGAGCCATGTAG...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTGAGAGAGCTGTTTCTTaGGAAACAGACAGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSERAVS*ETDRGV
Trigger: GACACCCCTGTCTGTTTCTCAAGAAACAGCTCTCTC...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTATTGCTGTGTAGGTCTTaGGGGAGTGGAGTCTCTAGA +
Preference number: 4 (lower is better)
Translates to: TRNEREPAVTYIPISHCLLLCRS*GSGVSR
Trigger: TCTAGAGACTCCACTCCCTCAAGACCTACACAGCAA...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAAAGCAGTACTGGGAGATaGTGTTCTGGGCAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPESSTGR*CSGQLR
Trigger: TCTCAGCTGCCCAGAACATCATCTCCCAGTACTGCT...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp ACCGTCAGCTTCATTCATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATATTGCAGCCCTGATCTaGCTTGCTTCATACTCCAGC +
Preference number: 4 (lower is better)
Translates to: TVSFIHAVKQSRLGKHIHIAALI*LASYSS
Trigger: GCTGGAGTATGAAGCAAGGCAGATCAGGGCTGCAAT...ATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATGAATGAAGCTGACGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTAAAGCTGCTCCTCCATTaGAGCCCTGATCTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVKLLLH*SPDLPC
Trigger: GCAAGGCAGATCAGGGCTGCAATGGAGGAGCAGCTT...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp CAGAAAGTAAGAGCTAAAAGAGCCTTTGTGACAGTTAAGAATCAGAAGCATGTCAGGCAGCATCATGCCTaGTCTGAGATGACCTCTCCG +
Preference number: 4 (lower is better)
Translates to: QKVRAKRAFVTVKNQKHVRQHHA*SEMTSP
Trigger: CGGAGAGGTCATCTCAGAGCAGGCATGATGCTGCCT...GACATGCTTCTGATTCTTAACTGTCACAAAGGCTCTTTTAGCTCTTACTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066133.7
CDS-3UTR GCA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTAGGAAGACATCCAGACTaGCGCATGGATATACAGCTG +
Preference number: 4 (lower is better)
Translates to: TRNEREPAVTYIPISHCLGRHPD*RMDIQL
Trigger: CAGCTGTATATCCATGCGGCAGTCTGGATGTCTTCC...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp ATGGGAATTTCGTCTCCAATAGGTGGAATGGACTCTTCTTTTACTTCTAACATTAATGATGTTGTGGAGTaGTGCACTGGCCCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: MGISSPIGGMDSSFTSNINDVVE*CTGPGP
Trigger: CGGGCCAGGGCCAGTGCAGCACTCCACAACATCATT...AATGTTAGAAGTAAAAGAAGAGTCCATTCCACCTATTGGAGACGAAATTCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTATTTTGTCCTGGTCCATaGCTTGTTCGTGGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: TRNEREPAVTYIPISHCLFCPGP*LVRGLP
Trigger: AGGAAGCCCACGAACAAGGCATGGACCAGGACAAAA...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp AATTATGGAGCGTGTGTGGAGGTTGGAGGATTCTGGGGACAGACTTCATGTCACAGCACATTCCATCAATaGTTTCACACTTCCAACTTC +
Preference number: 4 (lower is better)
Translates to: NYGACVEVGGFWGQTSCHSTFHQ*FHTSNF
Trigger: GAAGTTGGAAGTGTGAAAGCATTGATGGAATGTGCT...GTGACATGAAGTCTGTCCCCAGAATCCTCCAACCTCCACACACGCTCCATAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCCTTCCTGAGTTCAACTaGTCATCTGAATATTTAAGA +
Preference number: 4 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCILPEFN*SSEYLR
Trigger: TCTTAAATATTCAGATGAGCAGTTGAACTCAGGAAG...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp AATTATGGAGCGTGTGTGGAGGTTGGAGGATTCTGGGGACAGACTTCATGTCACAGTATTAGCAGAATCTaGTTCCTGTGTTGTCTGATC +
Preference number: 4 (lower is better)
Translates to: NYGACVEVGGFWGQTSCHSISRI*FLCCLI
Trigger: GATCAGACAACACAGGAAGCAGATTCTGCTAATACT...GTGACATGAAGTCTGTCCCCAGAATCCTCCAACCTCCACACACGCTCCATAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp ACCGTCAGCTTCATTCATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATAGCATTCTGGGACACTaGTGGAACTTCAGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: TVSFIHAVKQSRLGKHIHSILGH*WNFSCR
Trigger: CCTGCAACTGAAGTTCCAGCAGTGTCCCAGAATGCT...ATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATGAATGAAGCTGACGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTGCATTTACAGCAGTCTaGTTAGGCCCACTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSAFTAV*LGPLSL
Trigger: GAGAGAGAGTGGGCCTAAGCAGACTGCTGTAAATGC...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCAGAATTGATACATTCTaGAAGAATATCTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCIRIDTF*KNISFL
Trigger: GAGGAAGGAGATATTCTTGCAGAATGTATCAATTCT...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCACTTACTATGGAGTTTaGGCCTTCCTGAATAGCTTT +
Preference number: 4 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPTYYGV*AFLNSF
Trigger: AAAGCTATTCAGGAAGGCGCAAACTCCATAGTAAGT...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp CATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATGGGGAACCACATTACGCTGCAGCAGCTTGGTaGAAACTACTTACTATGGAG +
Preference number: 4 (lower is better)
Translates to: HAVKQSRLGKHIHGEPHYAAAAW*KLLTME
Trigger: CTCCATAGTAAGTAGTTTGCACCAAGCTGCTGCAGC...GTAATGTGGTTCCCCATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp CATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATGGGGAACCACATTACCTGATTTGGGAAGTTTaGCTGGTGATAGGGCTAAGC +
Preference number: 4 (lower is better)
Translates to: HAVKQSRLGKHIHGEPHYLIWEV*LVIGLS
Trigger: GCTTAGCCCTATCACCAGGCAAACTTCCCAAATCAG...GTAATGTGGTTCCCCATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GACAAGAGTGATGCACTCAGAGGCAGTGGACATCTTGACTTTCGTATTCCTAAGATTCAGTCCTTTAGATaGCGACTCACTTCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: DKSDALRGSGHLDFRIPKIQSFR*RLTSGD
Trigger: ATCCCCAGAAGTGAGTCGGCATCTAAAGGACTGAAT...CTTAGGAATACGAAAGTCAAGATGTCCACTGCCTCTGAGTGCATCACTCTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp CTGAATTTCCCTTTCCATAGCCTCTTACTGCCCATCGAAACTAAGTATTTTAAGCCGCTAGGTGAGCTGTaGTTGCTGGAGCTACTGGAA +
Preference number: 4 (lower is better)
Translates to: LNFPFHSLLLPIETKYFKPLGEL*LLELLE
Trigger: TTCCAGTAGCTCCAGCAAGCACAGCTCACCTAGCGG...CTTAAAATACTTAGTTTCGATGGGCAGTAAGAGGCTATGGAAAGGGAAATTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTAATTCTCCTGAACGGCTaGATACAGATCCTTCCCGAC +
Preference number: 4 (lower is better)
Translates to: TRNEREPAVTYIPISHCLILLNG*IQILPD
Trigger: GTCGGGAAGGATCTGTATCCAGCCGTTCAGGAGAAT...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp AAAGTAAGAGCTAAAAGAGCCTTTGTGACAGTTAAGAATCAGAAGCATGTCTTTCGCTTCTCCATGTCCTaGCAGGTGCCAAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: KVRAKRAFVTVKNQKHVFRFSMS*QVPSCS
Trigger: GGAGCAGCTTGGCACCTGCCAGGACATGGAGAAGCG...AAAGACATGCTTCTGATTCTTAACTGTCACAAAGGCTCTTTTAGCTCTTACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066133.7
CDS-3UTR CCA 90 bp GTAAGAGCTAAAAGAGCCTTTGTGACAGTTAAGAATCAGAAGCATGTCTTTGTCTGGGACTGTAAAAGCTaGCGCACGCGCAGTATGTCC +
Preference number: 4 (lower is better)
Translates to: VRAKRAFVTVKNQKHVFVWDCKS*RTRSMS
Trigger: GGACATACTGCGCGTGCGCCAGCTTTTACAGTCCCA...GACAAAGACATGCTTCTGATTCTTAACTGTCACAAAGGCTCTTTTAGCTCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066133.7
CDS-3UTR CCA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTATGGGACTGTAAAAGCTaGCGCACGCGCAGTATGTCC +
Preference number: 4 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVWDCKS*RTRSMS
Trigger: GGACATACTGCGCGTGCGCCAGCTTTTACAGTCCCA...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp ACCGTCAGCTTCATTCATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATGCAATAACTCTGCAATaGCCTGCAGTCCCCCAAGTT +
Preference number: 4 (lower is better)
Translates to: TVSFIHAVKQSRLGKHIHAITLQ*PAVPQV
Trigger: AACTTGGGGGACTGCAGGCCATTGCAGAGTTATTGC...ATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATGAATGAAGCTGACGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GACAAGAGTGATGCACTCAGAGGCAGTGGACATCTTGACTTTCGTATTCCTAAGTGCATTTTCTGTTGTTaGATGGTAAGCACTGAGGCC +
Preference number: 4 (lower is better)
Translates to: DKSDALRGSGHLDFRIPKCIFCC*MVSTEA
Trigger: GGCCTCAGTGCTTACCATCCAACAACAGAAAATGCA...CTTAGGAATACGAAAGTCAAGATGTCCACTGCCTCTGAGTGCATCACTCTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTGTGTTTGAGTGTGTGTaGGAGGCAGAGCTTCTTCGT +
Preference number: 4 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSVFECV*EAELLR
Trigger: ACGAAGAAGCTCTGCCTCCCACACACACTCAAACAC...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp CATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATGGGGAACCACATTACGCACTGTGTATCTTATaGGCTAGGTCAGCTGGATAC +
Preference number: 4 (lower is better)
Translates to: HAVKQSRLGKHIHGEPHYALCIL*ARSAGY
Trigger: GTATCCAGCTGACCTAGCCCATAAGATACACAGTGC...GTAATGTGGTTCCCCATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTAGATAAGCCAGAAGCCTaGAGTCGGCTGGGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVDKPEA*SRLGLA
Trigger: AGCCAAACCCAGCCGACTCCAGGCTTCTGGCTTATC...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGTCTGAGCACCACTTTTaGAGGGAGACTTGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: STKNSIIHRTYSRKDASMSEHHF*RETWLL
Trigger: CAGGAGCCAAGTCTCCCTCCAAAAGTGGTGCTCAGA...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp ACCGTCAGCTTCATTCATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATGTTCTGGGGGACTTTTaGGTGTCTGAGCACCACTTT +
Preference number: 4 (lower is better)
Translates to: TVSFIHAVKQSRLGKHIHVLGDF*VSEHHF
Trigger: AAAGTGGTGCTCAGACACCCAAAAGTCCCCCAGAAC...ATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATGAATGAAGCTGACGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp ACCGTCAGCTTCATTCATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATCTGGACATAGTGTTCTaGGGGACTTTTGGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: TVSFIHAVKQSRLGKHIHLDIVF*GTFGCL
Trigger: CAGACACCCAAAAGTCCCCCAGAACACTATGTCCAG...ATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATGAATGAAGCTGACGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGTTTGCTTCTGCTTGGTaGCATGGTCTGCCCAGGACT +
Preference number: 4 (lower is better)
Translates to: STKNSIIHRTYSRKDASMFASAW*HGLPRT
Trigger: AGTCCTGGGCAGACCATGCCACCAAGCAGAAGCAAA...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp CTGAATTTCCCTTTCCATAGCCTCTTACTGCCCATCGAAACTAAGTATTTTAAGTTGGCACCTCTCTCTTaGCCTGCACTGTCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: LNFPFHSLLLPIETKYFKLAPLS*PALSVE
Trigger: CTCCACAGACAGTGCAGGCCAAGAGAGAGGTGCCAA...CTTAAAATACTTAGTTTCGATGGGCAGTAAGAGGCTATGGAAAGGGAAATTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp CATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATGGGGAACCACATTACAGGGACTTTACTTTTTaGCACCTCTCTCTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: HAVKQSRLGKHIHGEPHYRDFTF*HLSLGL
Trigger: CAGGCCAAGAGAGAGGTGCCAAAAAGTAAAGTCCCT...GTAATGTGGTTCCCCATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GACAAGAGTGATGCACTCAGAGGCAGTGGACATCTTGACTTTCGTATTCCTAAGACTCGGAAAGGCTTGTaGCTTTTTCCTTTGGGCATA +
Preference number: 4 (lower is better)
Translates to: DKSDALRGSGHLDFRIPKTRKGL*LFPLGI
Trigger: TATGCCCAAAGGAAAAAGCCACAAGCCTTTCCGAGT...CTTAGGAATACGAAAGTCAAGATGTCCACTGCCTCTGAGTGCATCACTCTTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp ACCGTCAGCTTCATTCATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATTTACTAGCTGCCTGCTaGCTTGAGTTTGGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: TVSFIHAVKQSRLGKHIHLLAAC*LEFGSG
Trigger: CCCAGAACCAAACTCAAGCCAGCAGGCAGCTAGTAA...ATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATGAATGAAGCTGACGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTATGCTGCCCCTCTATCTaGTCCGTCTTTGGAGGACTG +
Preference number: 4 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVCCPSI*SVFGGL
Trigger: CAGTCCTCCAAAGACGGACCAGATAGAGGGGCAGCA...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp AGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACTGCTGCCCCTCTATCTaGTCCGTCTTTGGAGGACTG +
Preference number: 4 (lower is better)
Translates to: SIYLVDQELICLLRAVLYCCPSI*SVFGGL
Trigger: CAGTCCTCCAAAGACGGACCAGATAGAGGGGCAGCA...GTACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCTTATTGTTGTTTTCCTaGTCAATGTCACTAAGGGAA +
Preference number: 4 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCILLLFS*SMSLRE
Trigger: TTCCCTTAGTGACATTGACCAGGAAAACAACAATAA...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GACAAGAGTGATGCACTCAGAGGCAGTGGACATCTTGACTTTCGTATTCCTAAGTTGGTAAGATTTTGTTaGCTCAGCTGTCTACCTGGG +
Preference number: 4 (lower is better)
Translates to: DKSDALRGSGHLDFRIPKLVRFC*LSCLPG
Trigger: CCCAGGTAGACAGCTGAGCCAACAAAATCTTACCAA...CTTAGGAATACGAAAGTCAAGATGTCCACTGCCTCTGAGTGCATCACTCTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTACCTCAGGGTTGGGCTTaGGGCTTCTTTGATGAAAGT +
Preference number: 4 (lower is better)
Translates to: TRNEREPAVTYIPISHCLPQGWA*GFFDES
Trigger: ACTTTCATCAAAGAAGCCCCAAGCCCAACCCTGAGG...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTTTTCCTCCTCAGGGTTaGGCTTGGGGCTTCTTTGAT +
Preference number: 4 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSFPPQG*AWGFFD
Trigger: ATCAAAGAAGCCCCAAGCCCAACCCTGAGGAGGAAA...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTTCCTCCATGTTCCTTTaGTGGGCACCTGGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSSSMFL*WAPGFP
Trigger: AGGAAAACCAGGTGCCCACCAAAGGAACATGGAGGA...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp CATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATGGGGAACCACATTACGAGAAGCCATGCCTGTaGGAGAAATGTCACTTTCCT +
Preference number: 4 (lower is better)
Translates to: HAVKQSRLGKHIHGEPHYEKPCL*EKCHFP
Trigger: AGGAAAGTGACATTTCTCCCACAGGCATGGCTTCTC...GTAATGTGGTTCCCCATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp ACCGTCAGCTTCATTCATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATGATAGATCAGAGGCTTaGATTCAGCACCACTGGCAG +
Preference number: 4 (lower is better)
Translates to: TVSFIHAVKQSRLGKHIHDRSEA*IQHHWQ
Trigger: CTGCCAGTGGTGCTGAATCCAAGCCTCTGATCTATC...ATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATGAATGAAGCTGACGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR CAA 72 bp TGGGGTGTCTTCTACGCAGTAAGTCTGTATTGTTTCTaGGTTGATGGAGGGGACTTTGCAAGTAGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: WGVFYAVSLYCF*VDGGDFASSAF
Trigger: AAAGGCACTACTTGCAAAGTCCCCTCCATCAACCAAGAAACAATACAGACTTACTGCGTAGAAGACACCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
CDS-3UTR TCA 90 bp GTAAGAGCTAAAAGAGCCTTTGTGACAGTTAAGAATCAGAAGCATGTCTTTGTCTGTTCTTCTTGGGAATaGCCCCATGGGGACAGGACT +
Preference number: 4 (lower is better)
Translates to: VRAKRAFVTVKNQKHVFVCSSWE*PHGDRT
Trigger: AGTCCTGTCCCCATGGGGTCATTCCCAAGAAGAACA...GACAAAGACATGCTTCTGATTCTTAACTGTCACAAAGGCTCTTTTAGCTCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000066133.7
CDS-3UTR TCA 90 bp CTGAATTTCCCTTTCCATAGCCTCTTACTGCCCATCGAAACTAAGTATTTTAAGTGTTCTTCTTGGGAATaGCCCCATGGGGACAGGACT +
Preference number: 4 (lower is better)
Translates to: LNFPFHSLLLPIETKYFKCSSWE*PHGDRT
Trigger: AGTCCTGTCCCCATGGGGTCATTCCCAAGAAGAACA...CTTAAAATACTTAGTTTCGATGGGCAGTAAGAGGCTATGGAAAGGGAAATTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTAACACTGGCTGTTTCGTaGTCCACACGTGTAGCTGGA +
Preference number: 4 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVTLAVS*STRVAG
Trigger: TCCAGCTACACGTGTGGATCACGAAACAGCCAGTGT...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp ACCGTCAGCTTCATTCATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATCTTGTCATCAGGCTGTaGGTGAATGATGTTGTGGAG +
Preference number: 4 (lower is better)
Translates to: TVSFIHAVKQSRLGKHIHLVIRL*VNDVVE
Trigger: CTCCACAACATCATTCACTCACAGCCTGATGACAAG...ATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATGAATGAAGCTGACGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp ATGGGAATTTCGTCTCCAATAGGTGGAATGGACTCTTCTTTTACTTCTAACATTACAGCAGGACAGATCTaGTGCTCAACAGGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: MGISSPIGGMDSSFTSNITAGQI*CSTGAG
Trigger: GCCAGCTCCTGTTGAGCATCAGATCTGTCCTGCTGT...AATGTTAGAAGTAAAAGAAGAGTCCATTCCACCTATTGGAGACGAAATTCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTTGCAGGATCTTCAGCTaGCCGAGTTACATCATTCTC +
Preference number: 4 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSCRIFS*PSYIIL
Trigger: GAGAATGATGTAACTCGGTCAGCTGAAGATCCTGCA...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTAGGGAGACTTGGCTCCTaGAGAAAACTCAACAGCTTT +
Preference number: 4 (lower is better)
Translates to: TRNEREPAVTYIPISHCLGRLGS*RKLNSF
Trigger: AAAGCTGTTGAGTTTTCTTCAGGAGCCAAGTCTCCC...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp CTGAATTTCCCTTTCCATAGCCTCTTACTGCCCATCGAAACTAAGTATTTTAAGGGACTTTTGGGTGTCTaGGCACCACTTTTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: LNFPFHSLLLPIETKYFKGLLGV*APLLEG
Trigger: TCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCC...CTTAAAATACTTAGTTTCGATGGGCAGTAAGAGGCTATGGAAAGGGAAATTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp CATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATGGGGAACCACATTACCCATTGTCGTTTTCCTaGACTGGAGGCATGATTCTT +
Preference number: 4 (lower is better)
Translates to: HAVKQSRLGKHIHGEPHYPLSFS*TGGMIL
Trigger: AAGAATCATGCCTCCAGTTCAGGAAAACGACAATGG...GTAATGTGGTTCCCCATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp GACAAGAGTGATGCACTCAGAGGCAGTGGACATCTTGACTTTCGTATTCCTAAGCATGGGCTTTACTGGTaGAGTAGGCTTCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: DKSDALRGSGHLDFRIPKHGLYW*SRLLFL
Trigger: AAGAAAAAGAAGCCTACTTCACCAGTAAAGCCCATG...CTTAGGAATACGAAAGTCAAGATGTCCACTGCCTCTGAGTGCATCACTCTTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp CATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATGGGGAACCACATTACGAGTTTGCGCCTTCCTaGATAGCTTTCCAGTCAAAA +
Preference number: 4 (lower is better)
Translates to: HAVKQSRLGKHIHGEPHYEFAPS*IAFQSK
Trigger: TTTTGACTGGAAAGCTATTCAGGAAGGCGCAAACTC...GTAATGTGGTTCCCCATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAAGATAGGGCTAAGCTCTaGCTTTCCTGCTGGCTTAGT +
Preference number: 4 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPEDRAKL*LSCWLS
Trigger: ACTAAGCCAGCAGGAAAGTCAGAGCTTAGCCCTATC...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp CTGAATTTCCCTTTCCATAGCCTCTTACTGCCCATCGAAACTAAGTATTTTAAGTCTACCAGGGGAAATTaGGTTTCGCCCTGGAGACTG +
Preference number: 4 (lower is better)
Translates to: LNFPFHSLLLPIETKYFKSTRGN*VSPWRL
Trigger: CAGTCTCCAGGGCGAAACTCAATTTCCCCTGGTAGA...CTTAAAATACTTAGTTTCGATGGGCAGTAAGAGGCTATGGAAAGGGAAATTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp AATTATGGAGCGTGTGTGGAGGTTGGAGGATTCTGGGGACAGACTTCATGTCACTTCTACCTTTTTATTTaGCCCATTGCCGTTACTCAT +
Preference number: 4 (lower is better)
Translates to: NYGACVEVGGFWGQTSCHFYLFI*PIAVTH
Trigger: ATGAGTAACGGCAATGGGTCAAATAAAAAGGTAGAA...GTGACATGAAGTCTGTCCCCAGAATCCTCCAACCTCCACACACGCTCCATAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp GACAAGAGTGATGCACTCAGAGGCAGTGGACATCTTGACTTTCGTATTCCTAAGAGAAAGGGATTCAAATaGGGCAGATTCCTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: DKSDALRGSGHLDFRIPKRKGFK*GRFLQF
Trigger: AAACTGGAGGAATCTGCCTCATTTGAATCCCTTTCT...CTTAGGAATACGAAAGTCAAGATGTCCACTGCCTCTGAGTGCATCACTCTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GTATACCAGAAAGTAAGAGCTAAAAGAGCCTTTGTGACAGTTAAGAATCAGAAGAAGCTGCTCCTCCATTaGAGCCCTGATCTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: VYQKVRAKRAFVTVKNQKKLLLH*SPDLPC
Trigger: GCAAGGCAGATCAGGGCTGCAATGGAGGAGCAGCTT...CTTCTGATTCTTAACTGTCACAAAGGCTCTTTTAGCTCTTACTTTCTGGTATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066133.7
CDS-3UTR GCA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTATCTCACAGTCCACCTaGAATAACTCTGCAATGGCC +
Preference number: 4 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSISQST*NNSAMA
Trigger: GGCCATTGCAGAGTTATTGCAGGTGGACTGTGAGAT...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GACAAGAGTGATGCACTCAGAGGCAGTGGACATCTTGACTTTCGTATTCCTAAGCTCTCAACGTCTTTTTaGTATTTACATCTGCTCGCC +
Preference number: 4 (lower is better)
Translates to: DKSDALRGSGHLDFRIPKLSTSF*YLHLLA
Trigger: GGCGAGCAGATGTAAATAGCAAAAAGACGTTGAGAG...CTTAGGAATACGAAAGTCAAGATGTCCACTGCCTCTGAGTGCATCACTCTTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTAAACCAGAAATGCCAGTaGTCCATCCACAGCACAGAT +
Preference number: 4 (lower is better)
Translates to: TRNEREPAVTYIPISHCLNQKCQ*SIHSTD
Trigger: ATCTGTGCTGTGGATGGAGCACTGGCATTTCTGGTT...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp ATGGGAATTTCGTCTCCAATAGGTGGAATGGACTCTTCTTTTACTTCTAACATTGGTGCCAACCAGAAATaGCAGTGCTCCATCCACAGC +
Preference number: 4 (lower is better)
Translates to: MGISSPIGGMDSSFTSNIGANQK*QCSIHS
Trigger: GCTGTGGATGGAGCACTGGCATTTCTGGTTGGCACC...AATGTTAGAAGTAAAAGAAGAGTCCATTCCACCTATTGGAGACGAAATTCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCCCACAAAGTTCCACATaGATTACTGACTATTGTCAA +
Preference number: 4 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPPQSST*ITDYCQ
Trigger: TTGACAATAGTCAGTAATGCATGTGGAACTTTGTGG...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp AATTATGGAGCGTGTGTGGAGGTTGGAGGATTCTGGGGACAGACTTCATGTCACCCACAAAGTTCCACATaGATTACTGACTATTGTCAA +
Preference number: 4 (lower is better)
Translates to: NYGACVEVGGFWGQTSCHPQSST*ITDYCQ
Trigger: TTGACAATAGTCAGTAATGCATGTGGAACTTTGTGG...GTGACATGAAGTCTGTCCCCAGAATCCTCCAACCTCCACACACGCTCCATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCATCATCCATATGATTTaGACTGTGTATCTTATGGGC +
Preference number: 4 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPIIHMI*TVYLMG
Trigger: GCCCATAAGATACACAGTGCAAATCATATGGATGAT...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTACATGTTTTTGTGCCTaGAGCCTATTCTGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSTCFCA*SLFCAG
Trigger: GCCAGCACAGAATAGGCTGCAGGCACAAAAACATGT...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp CATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATGGGGAACCACATTACGCTAACATGTTTTTGTaGCTGCAGCCTATTCTGTGC +
Preference number: 4 (lower is better)
Translates to: HAVKQSRLGKHIHGEPHYANMFL*LQPILC
Trigger: GCACAGAATAGGCTGCAGGCACAAAAACATGTTAGC...GTAATGTGGTTCCCCATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp ACCGTCAGCTTCATTCATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATGCTGCAGCAGCTTGGTaGAAACTACTTACTATGGAG +
Preference number: 4 (lower is better)
Translates to: TVSFIHAVKQSRLGKHIHAAAAW*KLLTME
Trigger: CTCCATAGTAAGTAGTTTGCACCAAGCTGCTGCAGC...ATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATGAATGAAGCTGACGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTACTGATTTGGGAAGTTTaGCTGGTGATAGGGCTAAGC +
Preference number: 4 (lower is better)
Translates to: TRNEREPAVTYIPISHCLLIWEV*LVIGLS
Trigger: GCTTAGCCCTATCACCAGGCAAACTTCCCAAATCAG...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTGGCCTACTTAATGGTTaGTGTGTAGGTCTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSGLLNG*CVGLEG
Trigger: TCCCTCAAGACCTACACAGCAACCATTAAGTAGGCC...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp AGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACCTTCATCTGTCTGGGTaGTGGCATGGAGCTCACATG +
Preference number: 4 (lower is better)
Translates to: SIYLVDQELICLLRAVLYLHLSG*WHGAHM
Trigger: CATGTGAGCTCCATGCCAGCACCCAGACAGATGAAG...GTACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAAATTCTCCTGAACGGCTaGATACAGATCCTTCCCGAC +
Preference number: 4 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPEILLNG*IQILPD
Trigger: GTCGGGAAGGATCTGTATCCAGCCGTTCAGGAGAAT...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp CAGAAAGTAAGAGCTAAAAGAGCCTTTGTGACAGTTAAGAATCAGAAGCATGTCTTGGGAATGACCCCATaGGGACAGGACTGCATTCTC +
Preference number: 4 (lower is better)
Translates to: QKVRAKRAFVTVKNQKHVLGMTP*GQDCIL
Trigger: GAGAATGCAGTCCTGTCCCCATGGGGTCATTCCCAA...GACATGCTTCTGATTCTTAACTGTCACAAAGGCTCTTTTAGCTCTTACTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066133.7
CDS-3UTR CCA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTACTATTTGCTGGATCCTaGCTATTCTTCGCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: TRNEREPAVTYIPISHCLLFAGS*LFFAVH
Trigger: GTGCACAGCGAAGAATAGCCAGGATCCAGCAAATAG...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GACAAGAGTGATGCACTCAGAGGCAGTGGACATCTTGACTTTCGTATTCCTAAGTCCTTTTCTATTTGCTaGATCCTGGCTATTCTTCGC +
Preference number: 4 (lower is better)
Translates to: DKSDALRGSGHLDFRIPKSFSIC*ILAILR
Trigger: GCGAAGAATAGCCAGGATCCAGCAAATAGAAAAGGA...CTTAGGAATACGAAAGTCAAGATGTCCACTGCCTCTGAGTGCATCACTCTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAAATCCACACGTGTAGCTaGACTCTGACCACTACTGGA +
Preference number: 4 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPEIHTCS*TLTTTG
Trigger: TCCAGTAGTGGTCAGAGTCCAGCTACACGTGTGGAT...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079362.13
CDS-3UTR CCA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAAATCCAGACTGCCGCATaGATATACAGCTGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPEIQTAA*IYSCLG
Trigger: CCCAAGACAGCTGTATATCCATGCGGCAGTCTGGAT...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTTTGGCTCTAGCATTCTaGGACACTGCTGGAACTTCA +
Preference number: 4 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSLALAF*DTAGTS
Trigger: TGAAGTTCCAGCAGTGTCCCAGAATGCTAGAGCCAA...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTAGGGACTTTACTTTTTaGCACCTCTCTCTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSRDFTF*HLSLGL
Trigger: CAGGCCAAGAGAGAGGTGCCAAAAAGTAAAGTCCCT...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCGATGCTTGTTGGACTTaGTCCATTATCTTTTTCACT +
Preference number: 4 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPDACWT*SIIFFT
Trigger: AGTGAAAAAGATAATGGACCAAGTCCAACAAGCATC...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp ACCGTCAGCTTCATTCATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATACTCGGCCTTTTCCCTaGAAAGGTCAACATCGTCAT +
Preference number: 4 (lower is better)
Translates to: TVSFIHAVKQSRLGKHIHTRPFP*KGQHRH
Trigger: ATGACGATGTTGACCTTTCCAGGGAAAAGGCCGAGT...ATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATGAATGAAGCTGACGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GACAAGAGTGATGCACTCAGAGGCAGTGGACATCTTGACTTTCGTATTCCTAAGCTGTGCTCTGTTTGCTaGATGTTTTATACTGGCTTG +
Preference number: 4 (lower is better)
Translates to: DKSDALRGSGHLDFRIPKLCSVC*MFYTGL
Trigger: CAAGCCAGTATAAAACATCCAGCAAACAGAGCACAG...CTTAGGAATACGAAAGTCAAGATGTCCACTGCCTCTGAGTGCATCACTCTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp AGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACATGCCTGAGGCTTACTaGGCTCTCCTTGTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: SIYLVDQELICLLRAVLYMPEAY*ALLVSW
Trigger: CCAACTCACAAGGAGAGCCCAGTAAGCCTCAGGCAT...GTACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GACAAGAGTGATGCACTCAGAGGCAGTGGACATCTTGACTTTCGTATTCCTAAGACTTTAGTGACAGAATaGAATCTGAGTCGGATGACG +
Preference number: 4 (lower is better)
Translates to: DKSDALRGSGHLDFRIPKTLVTE*NLSRMT
Trigger: CGTCATCCGACTCAGATTCCATTCTGTCACTAAAGT...CTTAGGAATACGAAAGTCAAGATGTCCACTGCCTCTGAGTGCATCACTCTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTACCTGGTGGGAGAATCTaGTCTAGAAGATGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: TRNEREPAVTYIPISHCLPGGRI*SRRWRK
Trigger: CTTTCTCCATCTTCTAGACCAGATTCTCCCACCAGG...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp CTGAATTTCCCTTTCCATAGCCTCTTACTGCCCATCGAAACTAAGTATTTTAAGGTCTGGGTGCTGGCATaGAGCTCACATGCCTTTCAT +
Preference number: 4 (lower is better)
Translates to: LNFPFHSLLLPIETKYFKVWVLA*SSHAFH
Trigger: ATGAAAGGCATGTGAGCTCCATGCCAGCACCCAGAC...CTTAAAATACTTAGTTTCGATGGGCAGTAAGAGGCTATGGAAAGGGAAATTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGCCTTTGGTGGGCACCTaGTTTTCCTTCATCTGTCTG +
Preference number: 4 (lower is better)
Translates to: STKNSIIHRTYSRKDASMPLVGT*FSFICL
Trigger: CAGACAGATGAAGGAAAACCAGGTGCCCACCAAAGG...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp ATGGGAATTTCGTCTCCAATAGGTGGAATGGACTCTTCTTTTACTTCTAACATTTGTTCTTCTTGGGAATaGCCCCATGGGGACAGGACT +
Preference number: 4 (lower is better)
Translates to: MGISSPIGGMDSSFTSNICSSWE*PHGDRT
Trigger: AGTCCTGTCCCCATGGGGTCATTCCCAAGAAGAACA...AATGTTAGAAGTAAAAGAAGAGTCCATTCCACCTATTGGAGACGAAATTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp GACAAGAGTGATGCACTCAGAGGCAGTGGACATCTTGACTTTCGTATTCCTAAGATATCGTCCTTATCATaGGTACCAAGCATTGACAAC +
Preference number: 4 (lower is better)
Translates to: DKSDALRGSGHLDFRIPKISSLS*VPSIDN
Trigger: GTTGTCAATGCTTGGTACTCATGATAAGGACGATAT...CTTAGGAATACGAAAGTCAAGATGTCCACTGCCTCTGAGTGCATCACTCTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAATCATCAGGCTGTGAGTaGATGATGTTGTGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPESSGCE*MMLWSA
Trigger: AGCACTCCACAACATCATTCACTCACAGCCTGATGA...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp CATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATGGGGAACCACATTACTTCCACATGCATTACTaGCTATTGTCAAGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: HAVKQSRLGKHIHGEPHYFHMHY*LLSSCE
Trigger: CTCACAGCTTGACAATAGTCAGTAATGCATGTGGAA...GTAATGTGGTTCCCCATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp GACAAGAGTGATGCACTCAGAGGCAGTGGACATCTTGACTTTCGTATTCCTAAGTTTAGGATTTCTTGCTaGGAGATTCCACAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: DKSDALRGSGHLDFRIPKFRISC*EIPQSS
Trigger: GGAACTTTGTGGAATCTCTCAGCAAGAAATCCTAAA...CTTAGGAATACGAAAGTCAAGATGTCCACTGCCTCTGAGTGCATCACTCTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAAGCCATTTCTTTGTGCTaGACTTGGACGCAGCTGATT +
Preference number: 4 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPEAISLC*TWTQLI
Trigger: AATCAGCTGCGTCCAAGTTCAGCACAAAGAAATGGC...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp ATGGGAATTTCGTCTCCAATAGGTGGAATGGACTCTTCTTTTACTTCTAACATTGGACTTTTGGGTGTCTaGGCACCACTTTTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: MGISSPIGGMDSSFTSNIGLLGV*APLLEG
Trigger: TCCCTCCAAAAGTGGTGCTCAGACACCCAAAAGTCC...AATGTTAGAAGTAAAAGAAGAGTCCATTCCACCTATTGGAGACGAAATTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp AGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACGATAGGGCTAAGCTCTaGCTTTCCTGCTGGCTTAGT +
Preference number: 4 (lower is better)
Translates to: SIYLVDQELICLLRAVLYDRAKL*LSCWLS
Trigger: ACTAAGCCAGCAGGAAAGTCAGAGCTTAGCCCTATC...GTACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp AGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACTTGCTGTGTAGGTCTTaGGGGAGTGGAGTCTCTAGA +
Preference number: 4 (lower is better)
Translates to: SIYLVDQELICLLRAVLYLLCRS*GSGVSR
Trigger: TCTAGAGACTCCACTCCCTCAAGACCTACACAGCAA...GTACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GTAAGAGCTAAAAGAGCCTTTGTGACAGTTAAGAATCAGAAGCATGTCTTTGTCATTGCAGCCCTGATCTaGCTTGCTTCATACTCCAGC +
Preference number: 4 (lower is better)
Translates to: VRAKRAFVTVKNQKHVFVIAALI*LASYSS
Trigger: GCTGGAGTATGAAGCAAGGCAGATCAGGGCTGCAAT...GACAAAGACATGCTTCTGATTCTTAACTGTCACAAAGGCTCTTTTAGCTCTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066133.7
CDS-3UTR GCA 90 bp TACCAGAAAGTAAGAGCTAAAAGAGCCTTTGTGACAGTTAAGAATCAGAAGCATAACTGTGTGCTAACATaGAACACCAGGGTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: YQKVRAKRAFVTVKNQKHNCVLT*NTRVSP
Trigger: GGGGCTGACCCTGGTGTTGCATGTTAGCACACAGTT...ATGCTTCTGATTCTTAACTGTCACAAAGGCTCTTTTAGCTCTTACTTTCTGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066133.7
CDS-3UTR GCA 90 bp ATGGGAATTTCGTCTCCAATAGGTGGAATGGACTCTTCTTTTACTTCTAACATTCTTCGAGGAGCAGAGTaGGTGCCGCTAGAACTCAAA +
Preference number: 4 (lower is better)
Translates to: MGISSPIGGMDSSFTSNILRGAE*VPLELK
Trigger: TTTGAGTTCTAGCGGCACGCACTCTGCTCCTCGAAG...AATGTTAGAAGTAAAAGAAGAGTCCATTCCACCTATTGGAGACGAAATTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACAGCCTTATTCTCAGTaGAGTGTGCAGACAGGTTCC +
Preference number: 4 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVQPYSQ*SVQTGS
Trigger: GGAACCTGTCTGCACACTGCACTGAGAATAAGGCTG...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTGGCATCCTTATACTTTaGAGGTCTGTTTGCCATGAG +
Preference number: 4 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSGILIL*RSVCHE
Trigger: CTCATGGCAAACAGACCTGCAAAGTATAAGGATGCC...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCCTTCCTGAGTTCAACTaGTCATCTGAATATTTAAGA +
Preference number: 4 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPLPEFN*SSEYLR
Trigger: TCTTAAATATTCAGATGAGCAGTTGAACTCAGGAAG...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp CATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATGGGGAACCACATTACTCATCTTCTATCACATaGTTTGGTCTTGCCCACCTT +
Preference number: 4 (lower is better)
Translates to: HAVKQSRLGKHIHGEPHYSSSIT*FGLAHL
Trigger: AAGGTGGGCAAGACCAAAGCATGTGATAGAAGATGA...GTAATGTGGTTCCCCATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp CATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATGGGGAACCACATTACAATATCTCCTTCCTCTaGTTTGTTGTCATCCAGGTC +
Preference number: 4 (lower is better)
Translates to: HAVKQSRLGKHIHGEPHYNISFL*FVVIQV
Trigger: GACCTGGATGACAACAAAGCAGAGGAAGGAGATATT...GTAATGTGGTTCCCCATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGGACTTACTAGCTGCCTaGTGGCTTGAGTTTGGTTCT +
Preference number: 4 (lower is better)
Translates to: STKNSIIHRTYSRKDASMDLLAA*WLEFGS
Trigger: AGAACCAAACTCAAGCCAGCAGGCAGCTAGTAAGTC...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GTAAGAGCTAAAAGAGCCTTTGTGACAGTTAAGAATCAGAAGCATGTCTTTGTCATTCTCCTGAACGGCTaGATACAGATCCTTCCCGAC +
Preference number: 4 (lower is better)
Translates to: VRAKRAFVTVKNQKHVFVILLNG*IQILPD
Trigger: GTCGGGAAGGATCTGTATCCAGCCGTTCAGGAGAAT...GACAAAGACATGCTTCTGATTCTTAACTGTCACAAAGGCTCTTTTAGCTCTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066133.7
CDS-3UTR CCA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGGATATACAGCTGTCTTaGGAGCTGGACATAGCTAGC +
Preference number: 4 (lower is better)
Translates to: STKNSIIHRTYSRKDASMDIQLS*ELDIAS
Trigger: GCTAGCTATGTCCAGCTCCCAAGACAGCTGTATATC...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTAATCCAGACTGCCGCATaGATATACAGCTGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVIQTAA*IYSCLG
Trigger: CCCAAGACAGCTGTATATCCATGCGGCAGTCTGGAT...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTACTCTCAGATTTTAACTaGGCCACAAGTGCTCTCATG +
Preference number: 4 (lower is better)
Translates to: TRNEREPAVTYIPISHCLLSDFN*ATSALM
Trigger: CATGAGAGCACTTGTGGCCCAGTTAAAATCTGAGAG...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTATCCCACAAGGCTTCCTaGTCTTTAGGATTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: TRNEREPAVTYIPISHCLSHKAS*SLGFLA
Trigger: AGCAAGAAATCCTAAAGACCAGGAAGCCTTGTGGGA...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTTCCCACAAGGCTTCCTaGTCTTTAGGATTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSSHKAS*SLGFLA
Trigger: AGCAAGAAATCCTAAAGACCAGGAAGCCTTGTGGGA...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GACAAGAGTGATGCACTCAGAGGCAGTGGACATCTTGACTTTCGTATTCCTAAGTATCATCATGTCGATTaGCGTCAAAAGCATAGTCAC +
Preference number: 4 (lower is better)
Translates to: DKSDALRGSGHLDFRIPKYHHVD*RQKHSH
Trigger: GTGACTATGCTTTTGACGCCAATCGACATGATGATA...CTTAGGAATACGAAAGTCAAGATGTCCACTGCCTCTGAGTGCATCACTCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp CATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATGGGGAACCACATTACTTTTGGAGGGAGACTTaGCTCCTGAAGAAAACTCAA +
Preference number: 4 (lower is better)
Translates to: HAVKQSRLGKHIHGEPHYFWRET*LLKKTQ
Trigger: TTGAGTTTTCTTCAGGAGCCAAGTCTCCCTCCAAAA...GTAATGTGGTTCCCCATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp AGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACCTGGACATAGTGTTCTaGGGGACTTTTGGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: SIYLVDQELICLLRAVLYLDIVF*GTFGCL
Trigger: CAGACACCCAAAAGTCCCCCAGAACACTATGTCCAG...GTACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp ATGGGAATTTCGTCTCCAATAGGTGGAATGGACTCTTCTTTTACTTCTAACATTTTTGCTTCTGCTTGGTaGCATGGTCTGCCCAGGACT +
Preference number: 4 (lower is better)
Translates to: MGISSPIGGMDSSFTSNIFASAW*HGLPRT
Trigger: AGTCCTGGGCAGACCATGCCACCAAGCAGAAGCAAA...AATGTTAGAAGTAAAAGAAGAGTCCATTCCACCTATTGGAGACGAAATTCCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTCAGCCTATTCTGTGCTaGCAGAAGTTTATACACAGG +
Preference number: 4 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSQPILC*QKFIHR
Trigger: CCTGTGTATAAACTTCTGCCAGCACAGAATAGGCTG...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTAACTCGGAAAGGCTTGTaGCTTTTTCCTTTGGGCATA +
Preference number: 4 (lower is better)
Translates to: TRNEREPAVTYIPISHCLTRKGL*LFPLGI
Trigger: TATGCCCAAAGGAAAAAGCCACAAGCCTTTCCGAGT...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTAATGCCGACTCACTTCTaGGGATACTGCTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVMPTHF*GYCWHS
Trigger: AGAATGCCAGCAGTATCCCCAGAAGTGAGTCGGCAT...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTGAAGGACTTTCAGAATaGGAGCGTGCAATATCATGC +
Preference number: 4 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSEGLSE*ERAISC
Trigger: GCATGATATTGCACGCTCCCATTCTGAAAGTCCTTC...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACCTTTGGTGGGCACCTaGTTTTCCTTCATCTGTCTG +
Preference number: 4 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVPLVGT*FSFICL
Trigger: CAGACAGATGAAGGAAAACCAGGTGCCCACCAAAGG...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp AGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACTCCTCCATGTTCCTTTaGTGGGCACCTGGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: SIYLVDQELICLLRAVLYSSMFL*WAPGFP
Trigger: AGGAAAACCAGGTGCCCACCAAAGGAACATGGAGGA...GTACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp AGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACGATAGATCAGAGGCTTaGATTCAGCACCACTGGCAG +
Preference number: 4 (lower is better)
Translates to: SIYLVDQELICLLRAVLYDRSEA*IQHHWQ
Trigger: CTGCCAGTGGTGCTGAATCCAAGCCTCTGATCTATC...GTACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp ACCGTCAGCTTCATTCATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATAGTTCCTTTCTGTTCTaGGGCCTCTACCTGAACAAA +
Preference number: 4 (lower is better)
Translates to: TVSFIHAVKQSRLGKHIHSSFLF*GLYLNK
Trigger: TTTGTTCAGGTAGAGGCCCCAGAACAGAAAGGAACT...ATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATGAATGAAGCTGACGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR CAA 72 bp AAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATaGCTTATGGCAACCTTGGAGAACAATATGGAATAC +
Preference number: 4 (lower is better)
Translates to: KRTSCDLYSHLP*LMATLENNMEY
Trigger: GTATTCCATATTGTTCTCCAAGGTTGCCATAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR CAA 72 bp AGTGAACTTCTGAAAGCACAACTAAGGTCAACCCCTTaGCTTTCACAGCCATTATCTCTAGCCAAAGGGTTT +
Preference number: 4 (lower is better)
Translates to: SELLKAQLRSTP*LSQPLSLAKGF
Trigger: AAACCCTTTGGCTAGAGATAATGGCTGTGAAAGCAAAGGGGTTGACCTTAGTTGTGCTTTCAGAAGTTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR CAA 72 bp AACCCATTCGATTTGTTTCTGAACCACTGGTTCCCCTaGACCTATATGGGGAAACACATTCTTGTTGTCCAA +
Preference number: 4 (lower is better)
Translates to: NPFDLFLNHWFP*TYMGKHILVVQ
Trigger: TTGGACAACAAGAATGTGTTTCCCCATATAGGTCAAGGGGAACCAGTGGTTCAGAAACAAATCGAATGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
CDS-3UTR TCA 90 bp AAAGTAAGAGCTAAAAGAGCCTTTGTGACAGTTAAGAATCAGAAGCATGTCTTTAGGACTGCATTCTCCTaGACGGCTGGATACAGATCC +
Preference number: 4 (lower is better)
Translates to: KVRAKRAFVTVKNQKHVFRTAFS*TAGYRS
Trigger: GGATCTGTATCCAGCCGTTCAGGAGAATGCAGTCCT...AAAGACATGCTTCTGATTCTTAACTGTCACAAAGGCTCTTTTAGCTCTTACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066133.7
CDS-3UTR TCA 90 bp AAAGTATACCAGAAAGTAAGAGCTAAAAGAGCCTTTGTGACAGTTAAGAATCAGCCTCCATTGCAGCCCTaGTCTGCCTTGCTTCATACT +
Preference number: 4 (lower is better)
Translates to: KVYQKVRAKRAFVTVKNQPPLQP*SALLHT
Trigger: AGTATGAAGCAAGGCAGATCAGGGCTGCAATGGAGG...CTGATTCTTAACTGTCACAAAGGCTCTTTTAGCTCTTACTTTCTGGTATACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066133.7
CDS-3UTR TCA 90 bp CTGAATTTCCCTTTCCATAGCCTCTTACTGCCCATCGAAACTAAGTATTTTAAGCTTGTCATCAGGCTGTaGGTGAATGATGTTGTGGAG +
Preference number: 4 (lower is better)
Translates to: LNFPFHSLLLPIETKYFKLVIRL*VNDVVE
Trigger: CTCCACAACATCATTCACTCACAGCCTGATGACAAG...CTTAAAATACTTAGTTTCGATGGGCAGTAAGAGGCTATGGAAAGGGAAATTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACAGGTCTGTTTGCCATaGGATTCCTTAAAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVQVCLP*DSLKLL
Trigger: CAGCAGCTTTAAGGAATCTCATGGCAAACAGACCTG...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGGCTTCCTGTGTTGTCTaGTCACATCCTATTTCATCG +
Preference number: 4 (lower is better)
Translates to: STKNSIIHRTYSRKDASMASCVV*SHPISS
Trigger: CGATGAAATAGGATGTGATCAGACAACACAGGAAGC...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp CTGAATTTCCCTTTCCATAGCCTCTTACTGCCCATCGAAACTAAGTATTTTAAGTGCAGGATCTTCAGCTaGCCGAGTTACATCATTCTC +
Preference number: 4 (lower is better)
Translates to: LNFPFHSLLLPIETKYFKCRIFS*PSYIIL
Trigger: GAGAATGATGTAACTCGGTCAGCTGAAGATCCTGCA...CTTAAAATACTTAGTTTCGATGGGCAGTAAGAGGCTATGGAAAGGGAAATTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAACCATTGTCGTTTTCCTaGACTGGAGGCATGATTCTT +
Preference number: 4 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPEPLSFS*TGGMIL
Trigger: AAGAATCATGCCTCCAGTTCAGGAAAACGACAATGG...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAAGAGATTTTTCCTCGCTaGGCATCATCTGTACTTCTG +
Preference number: 4 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPEEIFPR*ASSVLL
Trigger: CAGAAGTACAGATGATGCTCAGCGAGGAAAAATCTC...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAATTTCGCTCTCACTCTTaGGTCTTGAAGGCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPEFRSHS*VLKAFS
Trigger: AGAAAAGGCCTTCAAGACTCAAGAGTGAGAGCGAAA...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp ATGGGAATTTCGTCTCCAATAGGTGGAATGGACTCTTCTTTTACTTCTAACATTGGAAGACATCCAGACTaGCGCATGGATATACAGCTG +
Preference number: 4 (lower is better)
Translates to: MGISSPIGGMDSSFTSNIGRHPD*RMDIQL
Trigger: CAGCTGTATATCCATGCGGCAGTCTGGATGTCTTCC...AATGTTAGAAGTAAAAGAAGAGTCCATTCCACCTATTGGAGACGAAATTCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp ATGGGAATTTCGTCTCCAATAGGTGGAATGGACTCTTCTTTTACTTCTAACATTTTTTGTCCTGGTCCATaGCTTGTTCGTGGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: MGISSPIGGMDSSFTSNIFCPGP*LVRGLP
Trigger: AGGAAGCCCACGAACAAGGCATGGACCAGGACAAAA...AATGTTAGAAGTAAAAGAAGAGTCCATTCCACCTATTGGAGACGAAATTCCCAT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTACTCTCAACGTCTTTTTaGTATTTACATCTGCTCGCC +
Preference number: 4 (lower is better)
Translates to: TRNEREPAVTYIPISHCLLSTSF*YLHLLA
Trigger: GGCGAGCAGATGTAAATAGCAAAAAGACGTTGAGAG...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTAAACCAGAAATGCCAGTaGTCCATCCACAGCACAGAT +
Preference number: 4 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVNQKCQ*SIHSTD
Trigger: ATCTGTGCTGTGGATGGAGCACTGGCATTTCTGGTT...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp CATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATGGGGAACCACATTACTTCTCTCTTAGGATTTaGCTGTGGTCTTCGTTTGTA +
Preference number: 4 (lower is better)
Translates to: HAVKQSRLGKHIHGEPHYFSLRI*LWSSFV
Trigger: TACAAACGAAGACCACAGGCAAATCCTAAGAGAGAA...GTAATGTGGTTCCCCATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAAGGCATCCTTATACTTTaGAGGTCTGTTTGCCATGAG +
Preference number: 4 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPEGILIL*RSVCHE
Trigger: CTCATGGCAAACAGACCTGCAAAGTATAAGGATGCC...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGCTGCAGCCTATTCTGTaGTGGCAGAAGTTTATACAC +
Preference number: 4 (lower is better)
Translates to: STKNSIIHRTYSRKDASMLQPIL*WQKFIH
Trigger: GTGTATAAACTTCTGCCAGCACAGAATAGGCTGCAG...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp AGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACACATGTTTTTGTGCCTaGAGCCTATTCTGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: SIYLVDQELICLLRAVLYTCFCA*SLFCAG
Trigger: GCCAGCACAGAATAGGCTGCAGGCACAAAAACATGT...GTACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp ACCGTCAGCTTCATTCATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATTGGCTTCGGAATCCTTaGTTTCTTTGCCCTTTCTTA +
Preference number: 4 (lower is better)
Translates to: TVSFIHAVKQSRLGKHIHWLRNP*FLCPFL
Trigger: TAAGAAAGGGCAAAGAAAGCAAGGATTCCGAAGCCA...ATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATGAATGAAGCTGACGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGTGTGAATCATCGTCCTaGCTCTTGAGATTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: STKNSIIHRTYSRKDASMCESSS*LLRLKA
Trigger: TGCCTTCAATCTCAAGAGGCAGGACGATGATTCACA...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGGGCATGGAGCTCACATaGCTTTCATCCTCACTTTTT +
Preference number: 4 (lower is better)
Translates to: STKNSIIHRTYSRKDASMGMELT*LSSSLF
Trigger: AAAAAGTGAGGATGAAAGGCATGTGAGCTCCATGCC...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTAGATATACAGCTGTCTTaGGAGCTGGACATAGCTAGC +
Preference number: 4 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVDIQLS*ELDIAS
Trigger: GCTAGCTATGTCCAGCTCCCAAGACAGCTGTATATC...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACTGCTGCACTTCCCATaGCAATCATTTTGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVLLHFP*QSFCAW
Trigger: CCAAGCACAAAATGATTGCCATGGGAAGTGCAGCAG...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp CTGAATTTCCCTTTCCATAGCCTCTTACTGCCCATCGAAACTAAGTATTTTAAGCTGCTGCACTTCCCATaGCAATCATTTTGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: LNFPFHSLLLPIETKYFKLLHFP*QSFCAW
Trigger: CCAAGCACAAAATGATTGCCATGGGAAGTGCAGCAG...CTTAAAATACTTAGTTTCGATGGGCAGTAAGAGGCTATGGAAAGGGAAATTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGTGCATTTTCTGTTGTTaGATGGTAAGCACTGAGGCC +
Preference number: 4 (lower is better)
Translates to: STKNSIIHRTYSRKDASMCIFCC*MVSTEA
Trigger: GGCCTCAGTGCTTACCATCCAACAACAGAAAATGCA...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGATAACTTTGGCTATCTaGGCTGCAGTGGTAGTGATC +
Preference number: 4 (lower is better)
Translates to: STKNSIIHRTYSRKDASMITLAI*AAVVVI
Trigger: GATCACTACCACTGCAGCCCAGATAGCCAAAGTTAT...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTTTGTTTCTGAACCACTaGTTCCCCTTGACCTATATG +
Preference number: 4 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSLFLNH*FPLTYM
Trigger: CATATAGGTCAAGGGGAACCAGTGGTTCAGAAACAA...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp ACCGTCAGCTTCATTCATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATGTCTGTATTGTTTCTTaGTTGATGGAGGGGACTTTG +
Preference number: 4 (lower is better)
Translates to: TVSFIHAVKQSRLGKHIHVCIVS*LMEGTL
Trigger: CAAAGTCCCCTCCATCAACCAAGAAACAATACAGAC...ATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATGAATGAAGCTGACGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp ATGGGAATTTCGTCTCCAATAGGTGGAATGGACTCTTCTTTTACTTCTAACATTGCGGCTGCAGCAGCTTaGTGCAAACTACTTACTATG +
Preference number: 4 (lower is better)
Translates to: MGISSPIGGMDSSFTSNIAAAAA*CKLLTM
Trigger: CATAGTAAGTAGTTTGCACCAAGCTGCTGCAGCCGC...AATGTTAGAAGTAAAAGAAGAGTCCATTCCACCTATTGGAGACGAAATTCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTATTTGACCCACTGATTTaGGAAGTTTGCCTGGTGATA +
Preference number: 4 (lower is better)
Translates to: TRNEREPAVTYIPISHCLFDPLI*EVCLVI
Trigger: TATCACCAGGCAAACTTCCCAAATCAGTGGGTCAAA...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTATGGGAGATGATGTTCTaGGCAGCTGAGACAGTTTGT +
Preference number: 4 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVWEMMF*AAETVC
Trigger: ACAAACTGTCTCAGCTGCCCAGAACATCATCTCCCA...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp ATGGGAATTTCGTCTCCAATAGGTGGAATGGACTCTTCTTTTACTTCTAACATTTTTCCTCCTCAGGGTTaGGCTTGGGGCTTCTTTGAT +
Preference number: 4 (lower is better)
Translates to: MGISSPIGGMDSSFTSNIFPPQG*AWGFFD
Trigger: ATCAAAGAAGCCCCAAGCCCAACCCTGAGGAGGAAA...AATGTTAGAAGTAAAAGAAGAGTCCATTCCACCTATTGGAGACGAAATTCCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAAAGTTCCTTTCTGTTCTaGGGCCTCTACCTGAACAAA +
Preference number: 4 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPESSFLF*GLYLNK
Trigger: TTTGTTCAGGTAGAGGCCCCAGAACAGAAAGGAACT...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp ATGGGAATTTCGTCTCCAATAGGTGGAATGGACTCTTCTTTTACTTCTAACATTGACTTTGGGCTCCACTaGATTCTGTGCTGTCAGTCT +
Preference number: 4 (lower is better)
Translates to: MGISSPIGGMDSSFTSNIDFGLH*ILCCQS
Trigger: AGACTGACAGCACAGAATCCAGTGGAGCCCAAAGTC...AATGTTAGAAGTAAAAGAAGAGTCCATTCCACCTATTGGAGACGAAATTCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR CAA 72 bp GTGTATCCAGTTCTCCATCATTATCATCCATATGATTaGCACTGTGTATCTTATGGGCTAGGTCAGCTGGAT +
Preference number: 4 (lower is better)
Translates to: VYPVLHHYHPYD*HCVSYGLGQLD
Trigger: ATCCAGCTGACCTAGCCCATAAGATACACAGTGCAAATCATATGGATGATAATGATGGAGAACTGGATACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
CDS-3UTR TCA 90 bp CAGAAAGTAAGAGCTAAAAGAGCCTTTGTGACAGTTAAGAATCAGAAGCATGTCCTCTTGTCGAAGATTTaGGTTCTCCATCTTCAGTGC +
Preference number: 4 (lower is better)
Translates to: QKVRAKRAFVTVKNQKHVLLSKI*VLHLQC
Trigger: GCACTGAAGATGGAGAACTCAAATCTTCGACAAGAG...GACATGCTTCTGATTCTTAACTGTCACAAAGGCTCTTTTAGCTCTTACTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066133.7
CDS-3UTR TCA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTATGAGTACCAAGCATTaGCAACAAGGAATACACCAT +
Preference number: 4 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSMSTKH*QQGIHH
Trigger: ATGGTGTATTCCTTGTTGTCAATGCTTGGTACTCAT...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp AGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACATCTGTTCCAAAAGATaGAGGACTCGGATTTCACGC +
Preference number: 4 (lower is better)
Translates to: SIYLVDQELICLLRAVLYICSKR*RTRISR
Trigger: GCGTGAAATCCGAGTCCTTCATCTTTTGGAACAGAT...GTACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTAATCTGTTCCAAAAGATaGAGGACTCGGATTTCACGC +
Preference number: 4 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVICSKR*RTRISR
Trigger: GCGTGAAATCCGAGTCCTTCATCTTTTGGAACAGAT...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTATTTTGTGCTTGGAATaGATGAGGTTCTTGAGCATG +
Preference number: 4 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSILCLE*MRFLSM
Trigger: CATGCTCAAGAACCTCATTCATTCCAAGCACAAAAT...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp ATGGGAATTTCGTCTCCAATAGGTGGAATGGACTCTTCTTTTACTTCTAACATTCAGGTCTGTTTGCCATaGGATTCCTTAAAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: MGISSPIGGMDSSFTSNIQVCLP*DSLKLL
Trigger: CAGCAGCTTTAAGGAATCTCATGGCAAACAGACCTG...AATGTTAGAAGTAAAAGAAGAGTCCATTCCACCTATTGGAGACGAAATTCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAAGTTTCTGATAAATGCTaGGCATCTAGCTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPEVSDKC*ASSSAS
Trigger: AGAAGCTGAGCTAGATGCTCAGCATTTATCAGAAAC...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp CATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATGGGGAACCACATTACAGAGCATGTCCTATTTaGATTTTCCGACTTAGTGAA +
Preference number: 4 (lower is better)
Translates to: HAVKQSRLGKHIHGEPHYRACPI*IFRLSE
Trigger: TTCACTAAGTCGGAAAATTCAAATAGGACATGCTCT...GTAATGTGGTTCCCCATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTACCTGAACTGGAGGCATaGTTCTTAATTCTACATCTT +
Preference number: 4 (lower is better)
Translates to: TRNEREPAVTYIPISHCLPELEA*FLILHL
Trigger: AAGATGTAGAATTAAGAATCATGCCTCCAGTTCAGG...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp ACCGTCAGCTTCATTCATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATCCTGAACTGGAGGCATaGTTCTTAATTCTACATCTT +
Preference number: 4 (lower is better)
Translates to: TVSFIHAVKQSRLGKHIHPELEA*FLILHL
Trigger: AAGATGTAGAATTAAGAATCATGCCTCCAGTTCAGG...ATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATGAATGAAGCTGACGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTATTATACACAGGTAGCTaGCTTGGTTTCCTTGCCACA +
Preference number: 4 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVLYTGS*LGFLAT
Trigger: TGTGGCAAGGAAACCAAGTCAGCTACCTGTGTATAA...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp CTGAATTTCCCTTTCCATAGCCTCTTACTGCCCATCGAAACTAAGTATTTTAAGTTATACACAGGTAGCTaGCTTGGTTTCCTTGCCACA +
Preference number: 4 (lower is better)
Translates to: LNFPFHSLLLPIETKYFKLYTGS*LGFLAT
Trigger: TGTGGCAAGGAAACCAAGTCAGCTACCTGTGTATAA...CTTAAAATACTTAGTTTCGATGGGCAGTAAGAGGCTATGGAAAGGGAAATTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGCATGGGCTTTACTGGTaGAGTAGGCTTCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: STKNSIIHRTYSRKDASMHGLYW*SRLLFL
Trigger: AAGAAAAAGAAGCCTACTTCACCAGTAAAGCCCATG...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTCAGGTTCAGCTTCTTTaGTTGGTTCACTTTCTTTGT +
Preference number: 4 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSQVQLL*LVHFLC
Trigger: ACAAAGAAAGTGAACCAATCAAAGAAGCTGAACCTG...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp CTGAATTTCCCTTTCCATAGCCTCTTACTGCCCATCGAAACTAAGTATTTTAAGTTTCGCTCTCACTCTTaGGTCTTGAAGGCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: LNFPFHSLLLPIETKYFKFRSHS*VLKAFS
Trigger: AGAAAAGGCCTTCAAGACTCAAGAGTGAGAGCGAAA...CTTAAAATACTTAGTTTCGATGGGCAGTAAGAGGCTATGGAAAGGGAAATTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGTTGGCTGGAAATTTCTaGATTGGAGCGAATCTTTCC +
Preference number: 4 (lower is better)
Translates to: STKNSIIHRTYSRKDASMLAGNF*IGANLS
Trigger: GGAAAGATTCGCTCCAATTCAGAAATTTCCAGCCAA...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGAGAAAGGGATTCAAATaGGGCAGATTCCTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: STKNSIIHRTYSRKDASMRKGFK*GRFLQF
Trigger: AAACTGGAGGAATCTGCCTCATTTGAATCCCTTTCT...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp CCTGTGTTGTCTGATCACATCCTATTTCATCGTCAGCTGATGACAGTGATGATAAACGCTTTTGAGGGTTaGTTCCAAGTTCATTCATTG +
Preference number: 4 (lower is better)
Translates to: PVLSDHILFHRQLMTVMINAFEG*FQVHSL
Trigger: CAATGAATGAACTTGGAATCAACCCTCAAAAGCGTT...TATCATCACTGTCATCAGCTGACGATGAAATAGGATGTGATCAGACAACACAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
CDS-3UTR GCA 90 bp CATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATGGGGAACCACATTACTTTGCTATTTACATCTaGTCGCCAAGACAAATTCCT +
Preference number: 4 (lower is better)
Translates to: HAVKQSRLGKHIHGEPHYFAIYI*SPRQIP
Trigger: AGGAATTTGTCTTGGCGAGCAGATGTAAATAGCAAA...GTAATGTGGTTCCCCATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAATCATCTTCTATCACATaGTTTGGTCTTGCCCACCTT +
Preference number: 4 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPESSSIT*FGLAHL
Trigger: AAGGTGGGCAAGACCAAAGCATGTGATAGAAGATGA...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp AGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACGGTGTTCTGGCTTCTTaGTTGTCTTTGCTCGTTTTG +
Preference number: 4 (lower is better)
Translates to: SIYLVDQELICLLRAVLYGVLAS*LSLLVL
Trigger: CAAAACGAGCAAAGACAAGCAAGAAGCCAGAACACC...GTACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp ACCGTCAGCTTCATTCATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATAGTATTAGCAGAATCTaGTTCCTGTGTTGTCTGATC +
Preference number: 4 (lower is better)
Translates to: TVSFIHAVKQSRLGKHIHSISRI*FLCCLI
Trigger: GATCAGACAACACAGGAAGCAGATTCTGCTAATACT...ATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATGAATGAAGCTGACGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp CATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATGGGGAACCACATTACTTTACTTCTGCTGTCTaGAGAGTATTAGCAGAATCT +
Preference number: 4 (lower is better)
Translates to: HAVKQSRLGKHIHGEPHYFTSAV*RVLAES
Trigger: AGATTCTGCTAATACTCTGCAGACAGCAGAAGTAAA...GTAATGTGGTTCCCCATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAAAATATCTCCTTCCTCTaGTTTGTTGTCATCCAGGTC +
Preference number: 4 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPENISFL*FVVIQV
Trigger: GACCTGGATGACAACAAAGCAGAGGAAGGAGATATT...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAATGGCTTCGGAATCCTTaGTTTCTTTGCCCTTTCTTA +
Preference number: 4 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPEWLRNP*FLCPFL
Trigger: TAAGAAAGGGCAAAGAAAGCAAGGATTCCGAAGCCA...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTAACTTACTATGGAGTTTaGGCCTTCCTGAATAGCTTT +
Preference number: 4 (lower is better)
Translates to: TRNEREPAVTYIPISHCLTYYGV*AFLNSF
Trigger: AAAGCTATTCAGGAAGGCGCAAACTCCATAGTAAGT...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp ATGGGAATTTCGTCTCCAATAGGTGGAATGGACTCTTCTTTTACTTCTAACATTTTTCGCCCTGGAGACTaGATTGGCCTACTTAATGGT +
Preference number: 4 (lower is better)
Translates to: MGISSPIGGMDSSFTSNIFRPGD*IGLLNG
Trigger: ACCATTAAGTAGGCCAATGCAGTCTCCAGGGCGAAA...AATGTTAGAAGTAAAAGAAGAGTCCATTCCACCTATTGGAGACGAAATTCCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTAGGCATGGAGCTCACATaGCTTTCATCCTCACTTTTT +
Preference number: 4 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVGMELT*LSSSLF
Trigger: AAAAAGTGAGGATGAAAGGCATGTGAGCTCCATGCC...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp ATGTCGATTGGCGTCAAAAGCATAGTCACCATAAAGATTCTGCTTGTGTCTCTGTCCAAGTTCATTCATTaGATGCCTATGCTCTTCATC +
Preference number: 4 (lower is better)
Translates to: MSIGVKSIVTIKILLVSLSKFIH*MPMLFI
Trigger: GATGAAGAGCATAGGCATGCAATGAATGAACTTGGA...CAGAGACACAAGCAGAATCTTTATGGTGACTATGCTTTTGACGCCAATCGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
CDS-3UTR CCA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGTCCTTTTCTATTTGCTaGATCCTGGCTATTCTTCGC +
Preference number: 4 (lower is better)
Translates to: STKNSIIHRTYSRKDASMSFSIC*ILAILR
Trigger: GCGAAGAATAGCCAGGATCCAGCAAATAGAAAAGGA...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp AGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACCTCTCAGATTTTAACTaGGCCACAAGTGCTCTCATG +
Preference number: 4 (lower is better)
Translates to: SIYLVDQELICLLRAVLYLSDFN*ATSALM
Trigger: CATGAGAGCACTTGTGGCCCAGTTAAAATCTGAGAG...GTACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp ACCGTCAGCTTCATTCATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATACTGAGGGTTTCATTTaGCCTCTTTTACCATATCCA +
Preference number: 4 (lower is better)
Translates to: TVSFIHAVKQSRLGKHIHTEGFI*PLLPYP
Trigger: TGGATATGGTAAAAGAGGCCAAATGAAACCCTCAGT...ATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATGAATGAAGCTGACGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTACTGAGGGTTTCATTTaGCCTCTTTTACCATATCCA +
Preference number: 4 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSTEGFI*PLLPYP
Trigger: TGGATATGGTAAAAGAGGCCAAATGAAACCCTCAGT...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTAAATAGACAGGATAACTaGTGTTCTGGCTTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: TRNEREPAVTYIPISHCLNRQDN*CSGFLL
Trigger: AAGCAAGAAGCCAGAACACCAGTTATCCTGTCTATT...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp CATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATGGGGAACCACATTACTGTCCAAAATGTGGTTaGAATTTGAGGTGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: HAVKQSRLGKHIHGEPHYCPKCG*NLRCLS
Trigger: TGACAAACACCTCAAATTCCAACCACATTTTGGACA...GTAATGTGGTTCCCCATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAATTTTGGAGGGAGACTTaGCTCCTGAAGAAAACTCAA +
Preference number: 4 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPEFWRET*LLKKTQ
Trigger: TTGAGTTTTCTTCAGGAGCCAAGTCTCCCTCCAAAA...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGACTTTAGTGACAGAATaGAATCTGAGTCGGATGACG +
Preference number: 4 (lower is better)
Translates to: STKNSIIHRTYSRKDASMTLVTE*NLSRMT
Trigger: CGTCATCCGACTCAGATTCCATTCTGTCACTAAAGT...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAATTCTGGGGATACTGCTaGCATTCTTGGATAAACTTG +
Preference number: 4 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPEFWGYC*HSWINL
Trigger: CAAGTTTATCCAAGAATGCCAGCAGTATCCCCAGAA...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp AGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACACTTGCTTTAACAACTaGTCATATGAAGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: SIYLVDQELICLLRAVLYTCFNN*SYEAAA
Trigger: GGCTGCAGCTTCATATGATCAGTTGTTAAAGCAAGT...GTACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp ATGGGAATTTCGTCTCCAATAGGTGGAATGGACTCTTCTTTTACTTCTAACATTCTCTTGTCGAAGATTTaGGTTCTCCATCTTCAGTGC +
Preference number: 4 (lower is better)
Translates to: MGISSPIGGMDSSFTSNILLSKI*VLHLQC
Trigger: GCACTGAAGATGGAGAACTCAAATCTTCGACAAGAG...AATGTTAGAAGTAAAAGAAGAGTCCATTCCACCTATTGGAGACGAAATTCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGATGAGTACCAAGCATTaGCAACAAGGAATACACCAT +
Preference number: 4 (lower is better)
Translates to: STKNSIIHRTYSRKDASMMSTKH*QQGIHH
Trigger: ATGGTGTATTCCTTGTTGTCAATGCTTGGTACTCAT...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp AGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACGTTTCTGATAAATGCTaGGCATCTAGCTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SIYLVDQELICLLRAVLYVSDKC*ASSSAS
Trigger: AGAAGCTGAGCTAGATGCTCAGCATTTATCAGAAAC...GTACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp ACCGTCAGCTTCATTCATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATAGTATTGAAATTGTCTaGCCTACTATCATCATGTCG +
Preference number: 4 (lower is better)
Translates to: TVSFIHAVKQSRLGKHIHSIEIV*PTIIMS
Trigger: CGACATGATGATAGTAGGTCAGACAATTTCAATACT...ATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATGAATGAAGCTGACGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGCAGGTTCAGCTTCTTTaGTTGGTTCACTTTCTTTGT +
Preference number: 4 (lower is better)
Translates to: STKNSIIHRTYSRKDASMQVQLL*LVHFLC
Trigger: ACAAAGAAAGTGAACCAATCAAAGAAGCTGAACCTG...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAACCTTTTTCCCGCCTTTaGTTCCTTTGTTTTCAGATT +
Preference number: 4 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPEPFSRL*FLCFQI
Trigger: AATCTGAAAACAAAGGAATCAAAGGCGGGAAAAAGG...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAAACCCAGTACTCTCTCTaGTTCCATTTACAAATGTTC +
Preference number: 4 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPETQYSL*FHLQMF
Trigger: GAACATTTGTAAATGGAAGCAGAGAGAGTACTGGGT...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGACCCAGTACTCTCTCTaGTTCCATTTACAAATGTTC +
Preference number: 4 (lower is better)
Translates to: STKNSIIHRTYSRKDASMTQYSL*FHLQMF
Trigger: GAACATTTGTAAATGGAAGCAGAGAGAGTACTGGGT...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACCCAAGTTCATTCATTaGATGCCTATGCTCTTCATC +
Preference number: 4 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVPKFIH*MPMLFI
Trigger: GATGAAGAGCATAGGCATGCAATGAATGAACTTGGG...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp CATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATGGGGAACCACATTACTCAATAGCAAAATTCTaGAGTTTTTCGTCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: HAVKQSRLGKHIHGEPHYSIAKF*SFSSVA
Trigger: AGCAACTGACGAAAAACTGCAGAATTTTGCTATTGA...GTAATGTGGTTCCCCATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp AAAGTAAGAGCTAAAAGAGCCTTTGTGACAGTTAAGAATCAGAAGCATGTCTTTCTATTTGCTGGATCCTaGCTATTCTTCGCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: KVRAKRAFVTVKNQKHVFLFAGS*LFFAVH
Trigger: GTGCACAGCGAAGAATAGCCAGGATCCAGCAAATAG...AAAGACATGCTTCTGATTCTTAACTGTCACAAAGGCTCTTTTAGCTCTTACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066133.7
CDS-3UTR CCA 90 bp CAGAAAGTAAGAGCTAAAAGAGCCTTTGTGACAGTTAAGAATCAGAAGCATGTCTCCTTTTCTATTTGCTaGATCCTGGCTATTCTTCGC +
Preference number: 4 (lower is better)
Translates to: QKVRAKRAFVTVKNQKHVSFSIC*ILAILR
Trigger: GCGAAGAATAGCCAGGATCCAGCAAATAGAAAAGGA...GACATGCTTCTGATTCTTAACTGTCACAAAGGCTCTTTTAGCTCTTACTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066133.7
CDS-3UTR CCA 90 bp ATGGGAATTTCGTCTCCAATAGGTGGAATGGACTCTTCTTTTACTTCTAACATTATAACTTTGGCTATCTaGGCTGCAGTGGTAGTGATC +
Preference number: 4 (lower is better)
Translates to: MGISSPIGGMDSSFTSNIITLAI*AAVVVI
Trigger: GATCACTACCACTGCAGCCCAGATAGCCAAAGTTAT...AATGTTAGAAGTAAAAGAAGAGTCCATTCCACCTATTGGAGACGAAATTCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAAAATAGACAGGATAACTaGTGTTCTGGCTTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPENRQDN*CSGFLL
Trigger: AAGCAAGAAGCCAGAACACCAGTTATCCTGTCTATT...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTATGTCCAAAATGTGGTTaGAATTTGAGGTGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: TRNEREPAVTYIPISHCLCPKCG*NLRCLS
Trigger: TGACAAACACCTCAAATTCCAACCACATTTTGGACA...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTAGTCTGTATTGTTTCTTaGTTGATGGAGGGGACTTTG +
Preference number: 4 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVVCIVS*LMEGTL
Trigger: CAAAGTCCCCTCCATCAACCAAGAAACAATACAGAC...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTAGTCGAGGATGCTTGTTaGACTTGGTCCATTATCTTT +
Preference number: 4 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVVEDAC*TWSIIF
Trigger: AAAGATAATGGACCAAGTCCAACAAGCATCCTCGAC...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTAGCAAACTACTTACTATaGAGTTTGCGCCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVANYLL*SLRLPE
Trigger: TTCAGGAAGGCGCAAACTCCATAGTAAGTAGTTTGC...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp AGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACGCAAACTACTTACTATaGAGTTTGCGCCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: SIYLVDQELICLLRAVLYANYLL*SLRLPE
Trigger: TTCAGGAAGGCGCAAACTCCATAGTAAGTAGTTTGC...GTACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp CTGAATTTCCCTTTCCATAGCCTCTTACTGCCCATCGAAACTAAGTATTTTAAGGAACAGATGGATGTGTaGACAGAGACATATCAGGAA +
Preference number: 4 (lower is better)
Translates to: LNFPFHSLLLPIETKYFKEQMDV*TETYQE
Trigger: TTCCTGATATGTCTCTGTCCACACATCCATCTGTTC...CTTAAAATACTTAGTTTCGATGGGCAGTAAGAGGCTATGGAAAGGGAAATTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp AGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACGAACAGATGGATGTGTaGACAGAGACATATCAGGAA +
Preference number: 4 (lower is better)
Translates to: SIYLVDQELICLLRAVLYEQMDV*TETYQE
Trigger: TTCCTGATATGTCTCTGTCCACACATCCATCTGTTC...GTACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp ATGGGAATTTCGTCTCCAATAGGTGGAATGGACTCTTCTTTTACTTCTAACATTGAAGGACTTTCAGAATaGGAGCGTGCAATATCATGC +
Preference number: 4 (lower is better)
Translates to: MGISSPIGGMDSSFTSNIEGLSE*ERAISC
Trigger: GCATGATATTGCACGCTCCCATTCTGAAAGTCCTTC...AATGTTAGAAGTAAAAGAAGAGTCCATTCCACCTATTGGAGACGAAATTCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR CAA 72 bp TCAATATTCAGGTCTCCCATGCCAAGGAGCATTTACTaGGTAGATCAGGAACTCATTTGCTTATTAAGAGCT +
Preference number: 4 (lower is better)
Translates to: SIFRSPMPRSIY*VDQELICLLRA
Trigger: AGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTCCTTGGCATGGGAGACCTGAATATTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTAATATCGTCCTTATCATaGGTACCAAGCATTGACAAC +
Preference number: 4 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVISSLS*VPSIDN
Trigger: GTTGTCAATGCTTGGTACTCATGATAAGGACGATAT...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp AGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACATTTTGTGCTTGGAATaGATGAGGTTCTTGAGCATG +
Preference number: 4 (lower is better)
Translates to: SIYLVDQELICLLRAVLYILCLE*MRFLSM
Trigger: CATGCTCAAGAACCTCATTCATTCCAAGCACAAAAT...GTACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp CTGAATTTCCCTTTCCATAGCCTCTTACTGCCCATCGAAACTAAGTATTTTAAGGGAGGTATGAATGGCTaGTACTTCTTCCATAACTTT +
Preference number: 4 (lower is better)
Translates to: LNFPFHSLLLPIETKYFKGGMNG*YFFHNF
Trigger: AAAGTTATGGAAGAAGTATCAGCCATTCATACCTCC...CTTAAAATACTTAGTTTCGATGGGCAGTAAGAGGCTATGGAAAGGGAAATTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp ATGGGAATTTCGTCTCCAATAGGTGGAATGGACTCTTCTTTTACTTCTAACATTCAAGTAGTGCCTTTTTaGGTCTGGCCATTTCTTTGT +
Preference number: 4 (lower is better)
Translates to: MGISSPIGGMDSSFTSNIQVVPF*VWPFLC
Trigger: ACAAAGAAATGGCCAGACTCAAAAAGGCACTACTTG...AATGTTAGAAGTAAAAGAAGAGTCCATTCCACCTATTGGAGACGAAATTCCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp CTGAATTTCCCTTTCCATAGCCTCTTACTGCCCATCGAAACTAAGTATTTTAAGCCTTTTTCCCGCCTTTaGTTCCTTTGTTTTCAGATT +
Preference number: 4 (lower is better)
Translates to: LNFPFHSLLLPIETKYFKPFSRL*FLCFQI
Trigger: AATCTGAAAACAAAGGAATCAAAGGCGGGAAAAAGG...CTTAAAATACTTAGTTTCGATGGGCAGTAAGAGGCTATGGAAAGGGAAATTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp AGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACAGAAAGAATAGAAGATaGGCTTCCAGTTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: SIYLVDQELICLLRAVLYRKNRR*ASSSSP
Trigger: TGGAGAAGAACTGGAAGCTCATCTTCTATTCTTTCT...GTACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp CAGAAAGTAAGAGCTAAAAGAGCCTTTGTGACAGTTAAGAATCAGAAGCATGTCACCCAGTACTCTCTCTaGTTCCATTTACAAATGTTC +
Preference number: 4 (lower is better)
Translates to: QKVRAKRAFVTVKNQKHVTQYSL*FHLQMF
Trigger: GAACATTTGTAAATGGAAGCAGAGAGAGTACTGGGT...GACATGCTTCTGATTCTTAACTGTCACAAAGGCTCTTTTAGCTCTTACTTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066133.7
CDS-3UTR GCA 90 bp ATGGGAATTTCGTCTCCAATAGGTGGAATGGACTCTTCTTTTACTTCTAACATTCCCAAGTTCATTCATTaGATGCCTATGCTCTTCATC +
Preference number: 4 (lower is better)
Translates to: MGISSPIGGMDSSFTSNIPKFIH*MPMLFI
Trigger: GATGAAGAGCATAGGCATGCAATGAATGAACTTGGG...AATGTTAGAAGTAAAAGAAGAGTCCATTCCACCTATTGGAGACGAAATTCCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAATTTGCTATTTACATCTaGTCGCCAAGACAAATTCCT +
Preference number: 4 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPEFAIYI*SPRQIP
Trigger: AGGAATTTGTCTTGGCGAGCAGATGTAAATAGCAAA...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp AGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACAGCACATTCCATCAATaGTTTCACACTTCCAACTTC +
Preference number: 4 (lower is better)
Translates to: SIYLVDQELICLLRAVLYSTFHQ*FHTSNF
Trigger: GAAGTTGGAAGTGTGAAAGCATTGATGGAATGTGCT...GTACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp AGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACTTCTCTCTTAGGATTTaGCTGTGGTCTTCGTTTGTA +
Preference number: 4 (lower is better)
Translates to: SIYLVDQELICLLRAVLYFSLRI*LWSSFV
Trigger: TACAAACGAAGACCACAGGCAAATCCTAAGAGAGAA...GTACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAAATCATCCATATGATTTaGACTGTGTATCTTATGGGC +
Preference number: 4 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPEIIHMI*TVYLMG
Trigger: GCCCATAAGATACACAGTGCAAATCATATGGATGAT...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACTGGAGTACTTTCTGTaGCGAAGTGTAACAAAGTAT +
Preference number: 4 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVLEYFL*RSVTKY
Trigger: ATACTTTGTTACACTTCGCCACAGAAAGTACTCCAG...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTATCTACCTCTTTATCCTaGTTTTCATTTGATTCCTCA +
Preference number: 4 (lower is better)
Translates to: TRNEREPAVTYIPISHCLSTSLS*FSFDSS
Trigger: TGAGGAATCAAATGAAAACCAGGATAAAGAGGTAGA...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAAGATGCTTGTTGGACTTaGTCCATTATCTTTTTCACT +
Preference number: 4 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPEDACWT*SIIFFT
Trigger: AGTGAAAAAGATAATGGACCAAGTCCAACAAGCATC...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp ATGGGAATTTCGTCTCCAATAGGTGGAATGGACTCTTCTTTTACTTCTAACATTCTGTGCTCTGTTTGCTaGATGTTTTATACTGGCTTG +
Preference number: 4 (lower is better)
Translates to: MGISSPIGGMDSSFTSNILCSVC*MFYTGL
Trigger: CAAGCCAGTATAAAACATCCAGCAAACAGAGCACAG...AATGTTAGAAGTAAAAGAAGAGTCCATTCCACCTATTGGAGACGAAATTCCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp ACCGTCAGCTTCATTCATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATTTATTGTTGTTTTCCTaGTCAATGTCACTAAGGGAA +
Preference number: 4 (lower is better)
Translates to: TVSFIHAVKQSRLGKHIHLLLFS*SMSLRE
Trigger: TTCCCTTAGTGACATTGACCAGGAAAACAACAATAA...ATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATGAATGAAGCTGACGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGGTTGTTTCATTTGGCTaGAAATTTCTGAATTGGAGC +
Preference number: 4 (lower is better)
Translates to: STKNSIIHRTYSRKDASMVVSFG*KFLNWS
Trigger: GCTCCAATTCAGAAATTTCCAGCCAAATGAAACAAC...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR CAA 72 bp TATGGTGAAAGAACAGTCATGTTTCCAGTATTGAAATaGTCTGACCTACTATCATCATGTCGATTGGCGTCA +
Preference number: 4 (lower is better)
Translates to: YGERTVMFPVLK*SDLLSSCRLAS
Trigger: TGACGCCAATCGACATGATGATAGTAGGTCAGACAATTTCAATACTGGAAACATGACTGTTCTTTCACCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
CDS-3UTR TCA 90 bp AAAGTAAGAGCTAAAAGAGCCTTTGTGACAGTTAAGAATCAGAAGCATGTCTTTACTTGCTTTAACAACTaGTCATATGAAGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: KVRAKRAFVTVKNQKHVFTCFNN*SYEAAA
Trigger: GGCTGCAGCTTCATATGATCAGTTGTTAAAGCAAGT...AAAGACATGCTTCTGATTCTTAACTGTCACAAAGGCTCTTTTAGCTCTTACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066133.7
CDS-3UTR TCA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTAAGTATTGAAATTGTCTaGCCTACTATCATCATGTCG +
Preference number: 4 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVSIEIV*PTIIMS
Trigger: CGACATGATGATAGTAGGTCAGACAATTTCAATACT...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp AGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACAGAGCATGTCCTATTTaGATTTTCCGACTTAGTGAA +
Preference number: 4 (lower is better)
Translates to: SIYLVDQELICLLRAVLYRACPI*IFRLSE
Trigger: TTCACTAAGTCGGAAAATTCAAATAGGACATGCTCT...GTACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR TCA 90 bp ATGGGAATTTCGTCTCCAATAGGTGGAATGGACTCTTCTTTTACTTCTAACATTAATGTGGTTGGAATTTaGGGTGTTTGTCATCGGTAT +
Preference number: 4 (lower is better)
Translates to: MGISSPIGGMDSSFTSNINVVGI*GVCHRY
Trigger: ATACCGATGACAAACACCTCAAATTCCAACCACATT...AATGTTAGAAGTAAAAGAAGAGTCCATTCCACCTATTGGAGACGAAATTCCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGAGTTCATTCATTGCATaGCTATGCTCTTCATCAAAT +
Preference number: 4 (lower is better)
Translates to: STKNSIIHRTYSRKDASMSSFIA*LCSSSN
Trigger: ATTTGATGAAGAGCATAGGCATGCAATGAATGAACT...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGTCAATAGCAAAATTCTaGAGTTTTTCGTCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: STKNSIIHRTYSRKDASMSIAKF*SFSSVA
Trigger: AGCAACTGACGAAAAACTGCAGAATTTTGCTATTGA...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACAGCTTTATTATGCCTaGTTGATTCTGAAGATAAGC +
Preference number: 4 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVQLYYA*LILKIS
Trigger: GCTTATCTTCAGAATCAACCAGGCATAATAAAGCTG...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp GTATACCAGAAAGTAAGAGCTAAAAGAGCCTTTGTGACAGTTAAGAATCAGAAGATGTCCTTTTCTATTTaGTGGATCCTGGCTATTCTT +
Preference number: 4 (lower is better)
Translates to: VYQKVRAKRAFVTVKNQKMSFSI*WILAIL
Trigger: AAGAATAGCCAGGATCCAGCAAATAGAAAAGGACAT...CTTCTGATTCTTAACTGTCACAAAGGCTCTTTTAGCTCTTACTTTCTGGTATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066133.7
CDS-3UTR GCA 90 bp ATGGGAATTTCGTCTCCAATAGGTGGAATGGACTCTTCTTTTACTTCTAACATTATGTCCTTTTCTATTTaGTGGATCCTGGCTATTCTT +
Preference number: 4 (lower is better)
Translates to: MGISSPIGGMDSSFTSNIMSFSI*WILAIL
Trigger: AAGAATAGCCAGGATCCAGCAAATAGAAAAGGACAT...AATGTTAGAAGTAAAAGAAGAGTCCATTCCACCTATTGGAGACGAAATTCCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp AGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACAGTTCATTCATTGCATaGCTATGCTCTTCATCAAAT +
Preference number: 4 (lower is better)
Translates to: SIYLVDQELICLLRAVLYSSFIA*LCSSSN
Trigger: ATTTGATGAAGAGCATAGGCATGCAATGAATGAACT...GTACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp ATGTTTCCAGTATTGAAATTGTCTGACCTACTATCATCATGTCGATTGGCGTCAAGTTCATTCATTGCATaGCTATGCTCTTCATCAAAT +
Preference number: 4 (lower is better)
Translates to: MFPVLKLSDLLSSCRLASSSFIA*LCSSSN
Trigger: ATTTGATGAAGAGCATAGGCATGCAATGAATGAACT...TGACGCCAATCGACATGATGATAGTAGGTCAGACAATTTCAATACTGGAAACAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
CDS-3UTR GCA 90 bp ATGGGAATTTCGTCTCCAATAGGTGGAATGGACTCTTCTTTTACTTCTAACATTATTCTCTTTTACTTCTaGTGTCTGCAGAGTATTAGC +
Preference number: 4 (lower is better)
Translates to: MGISSPIGGMDSSFTSNIILFYF*CLQSIS
Trigger: GCTAATACTCTGCAGACAGCAGAAGTAAAAGAGAAT...AATGTTAGAAGTAAAAGAAGAGTCCATTCCACCTATTGGAGACGAAATTCCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp AGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACAGAATTGATACATTCTaGAAGAATATCTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SIYLVDQELICLLRAVLYRIDTF*KNISFL
Trigger: GAGGAAGGAGATATTCTTGCAGAATGTATCAATTCT...GTACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR GCA 90 bp TTAAATTCTTTAAGACGCTCTAGTAAGTCAATCTGTCCAGAAGTCATAGTCTCATCAAGTTCTGGTCAATaGATCTTCAGTTCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: LNSLRRSSKSICPEVIVSSSSGQ*IFSSQK
Trigger: TTTCTGGGAACTGAAGATGCATTGACCAGAACTTGA...TGAGACTATGACTTCTGGACAGATTGACTTACTAGAGCGTCTTAAAGAATTTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163295.2
CDS-3UTR CCA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTATCTACCTCTTTATCCTaGTTTTCATTTGATTCCTCA +
Preference number: 4 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVSTSLS*FSFDSS
Trigger: TGAGGAATCAAATGAAAACCAGGATAAAGAGGTAGA...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CCA 90 bp ATGGGAATTTCGTCTCCAATAGGTGGAATGGACTCTTCTTTTACTTCTAACATTGTTGTTTCATTTGGCTaGAAATTTCTGAATTGGAGC +
Preference number: 4 (lower is better)
Translates to: MGISSPIGGMDSSFTSNIVVSFG*KFLNWS
Trigger: GCTCCAATTCAGAAATTTCCAGCCAAATGAAACAAC...AATGTTAGAAGTAAAAGAAGAGTCCATTCCACCTATTGGAGACGAAATTCCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
3UTR CAA 72 bp ATAATCATCTTCCTGACACAGAGACTGGTTTACATTTaGATTAATTGCATGACTAGAACCCATTCGATTTGT +
Preference number: 4 (lower is better)
Translates to: IIIFLTQRLVYI*INCMTRTHSIC
Trigger: ACAAATCGAATGGGTTCTAGTCATGCAATTAATCAAAATGTAAACCAGTCTCTGTGTCAGGAAGATGATTAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
CDS GCA 90 bp GGCCTTCGTGCTGCCGGCCAGCTTCATGGGAGGCAGCATCATGCCTaGTCTGAGATGACCTCTCCGCTTCCGCCGCCTGGGACTGTAAAA +
Preference number: 5 (lower is better)
Translates to: GLRAAGQLHGRQHHA*SEMTSPLPPPGTVK
Trigger: TTTTACAGTCCCAGGCGGCGGAAGCGGAGAGGTCATCTCAGAGCAGGCATGATGCTGCCTCCCATGAAGCTGGCCGGCAGCACGAAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066133.7
ENSMUST00000079362.13
CDS GCA 90 bp GGCCTTCGTGCTGCCGGCCAGCTTCATGGGAGGCAGCATCATGCCTaGTCTGAGATGACCTCTGTGCACGCTTCTCCATGTCCTGGCAGG +
Preference number: 5 (lower is better)
Translates to: GLRAAGQLHGRQHHA*SEMTSVHASPCPGR
Trigger: CCTGCCAGGACATGGAGAAGCGTGCACAGAGGTCATCTCAGAGCAGGCATGATGCTGCCTCCCATGAAGCTGGCCGGCAGCACGAAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171187.8
CDS TCA 90 bp TCGTGCTGCCGGCCAGCTTCATGGGAGGCAGCATCATGCCTGCTCTaGGATGACCTCTGTGCACGCTTCTCCATGTCCTGGCAGGTGCCA +
Preference number: 5 (lower is better)
Translates to: SCCRPASWEAASCLL*DDLCARFSMSWQVP
Trigger: TGGCACCTGCCAGGACATGGAGAAGCGTGCACAGAGGTCATCTCAGAGCAGGCATGATGCTGCCTCCCATGAAGCTGGCCGGCAGCACGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171187.8
CDS TCA 90 bp GGAGCAGAGTGCGTGCCGCTAGAACTCAAAACACTGGCTGTTTCGTaGTCCACACGTGTAGCTGGACTTCGCTCCGCTTCCGCCGCCTGG +
Preference number: 5 (lower is better)
Translates to: GAECVPLELKTLAVS*STRVAGLRSASAAW
Trigger: CCAGGCGGCGGAAGCGGAGCGAAGTCCAGCTACACGTGTGGATCACGAAACAGCCAGTGTTTTGAGTTCTAGCGGCACGCACTCTGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115781.10
CDS TCA 90 bp GGGGTGTCTTCGACGTGGAAGGACTTGGGAGCATACCCGGATGCCTaGGGCTTACTGGGCTCTCCTTGTGAGTTGGCAGGTTCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: GVSSTWKDLGAYPDA*GLLGSPCELAGSAS
Trigger: AGAAGCTGAACCTGCCAACTCACAAGGAGAGCCCAGTAAGCCTCAGGCATCCGGGTATGCTCCCAAGTCCTTCCACGTCGAAGACACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS TCA 90 bp CTTCGTGTTGGTGCTCACTGGCGTAGGGATCTGAGACGGCCGGGCTaGAGTGCTGTCTGCGCTGCTCTTCCTAGGGCTAGGGTTGTAATT +
Preference number: 5 (lower is better)
Translates to: LRVGAHWRRDLRRPG*SAVCAALPRARVVI
Trigger: AATTACAACCCTAGCCCTAGGAAGAGCAGCGCAGACAGCACTTCAGCCCGGCCGTCTCAGATCCCTACGCCAGTGAGCACCAACACGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS TCA 90 bp TTCGAATCTCTCTTCTTCGTGTTGGTGCTCACTGGCGTAGGGATCTaGGACGGCCGGGCTGAAGTGCTGTCTGCGCTGCTCTTCCTAGGG +
Preference number: 5 (lower is better)
Translates to: FESLFFVLVLTGVGI*DGRAEVLSALLFLG
Trigger: CCCTAGGAAGAGCAGCGCAGACAGCACTTCAGCCCGGCCGTCTCAGATCCCTACGCCAGTGAGCACCAACACGAAGAAGAGAGATTCGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS GCA 90 bp TGCACGCTTCTCCATGTCCTGGCAGGTGCCAAGCTGCTCCTCCATTaGAGCCCTGATCTGCCTTGCTTCATACTCCAGCTGCCGTCTTGT +
Preference number: 5 (lower is better)
Translates to: CTLLHVLAGAKLLLH*SPDLPCFILQLPSC
Trigger: ACAAGACGGCAGCTGGAGTATGAAGCAAGGCAGATCAGGGCTGCAATGGAGGAGCAGCTTGGCACCTGCCAGGACATGGAGAAGCGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066133.7
ENSMUST00000079362.13
ENSMUST00000115781.10
ENSMUST00000171187.8
CDS GCA 90 bp GATGACCTCTGTGCACGCTTCTCCATGTCCTGGCAGGTGCCAAGCTaGTCCTCCATTGCAGCCCTGATCTGCCTTGCTTCATACTCCAGC +
Preference number: 5 (lower is better)
Translates to: DDLCARFSMSWQVPS*SSIAALICLASYSS
Trigger: GCTGGAGTATGAAGCAAGGCAGATCAGGGCTGCAATGGAGGAGCAGCTTGGCACCTGCCAGGACATGGAGAAGCGTGCACAGAGGTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171187.8
CDS CCA 90 bp CAGGAGGTGCCATCTGATAGATCAGAGGCTTGGATTCAGCACCACTaGCAGCACCTGAGGAAGCGCTCTGAGAAGCCATGCCTGTGGGAG +
Preference number: 5 (lower is better)
Translates to: QEVPSDRSEAWIQHH*QHLRKRSEKPCLWE
Trigger: CTCCCACAGGCATGGCTTCTCAGAGCGCTTCCTCAGGTGCTGCCAGTGGTGCTGAATCCAAGCCTCTGATCTATCAGATGGCACCTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CCA 90 bp GTAGCTGGACTTCGCTCCGCTTCCGCCGCCTGGGACTGTAAAAGCTaGCGCACGCGCAGTATGTCCTTTTCTATTTGCTGGATCCTGGCT +
Preference number: 5 (lower is better)
Translates to: VAGLRSASAAWDCKS*RTRSMSFSICWILA
Trigger: AGCCAGGATCCAGCAAATAGAAAAGGACATACTGCGCGTGCGCCAGCTTTTACAGTCCCAGGCGGCGGAAGCGGAGCGAAGTCCAGCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115781.10
CDS TCA 90 bp CCTCAGTTCCTTTCTGTTCTGGGGCCTCTACCTGAACAAAGGAGTTaGGGCGGGTTTCCAGACCCACGGTTTGCACAGGACTGCCACTGC +
Preference number: 5 (lower is better)
Translates to: PQFLSVLGPLPEQRS*GGFPDPRFAQDCHC
Trigger: GCAGTGGCAGTCCTGTGCAAACCGTGGGTCTGGAAACCCGCCTCAACTCCTTTGTTCAGGTAGAGGCCCCAGAACAGAAAGGAACTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS GCA 90 bp ATTCTTCGCTGTGCACGCTTCTCCATGTCCTGGCAGGTGCCAAGCTaGTCCTCCATTGCAGCCCTGATCTGCCTTGCTTCATACTCCAGC +
Preference number: 5 (lower is better)
Translates to: ILRCARFSMSWQVPS*SSIAALICLASYSS
Trigger: GCTGGAGTATGAAGCAAGGCAGATCAGGGCTGCAATGGAGGAGCAGCTTGGCACCTGCCAGGACATGGAGAAGCGTGCACAGCGAAGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066133.7
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCGTCCTGGTCCATGCCTaGTTCGTGGGCTTCCTGCCA +
Preference number: 5 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCIVLVHA*FVGFLP
Trigger: TGGCAGGAAGCCCACGAACAAGGCATGGACCAGGAC...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GTGCCAAGACAGGCGAGTGGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTTGGAGTCGGCTGGGTTaGGCTCTAGCATTCTGGGAC +
Preference number: 5 (lower is better)
Translates to: VPRQASGGQRMTLGGWFFWSRLG*ALAFWD
Trigger: GTCCCAGAATGCTAGAGCCAAACCCAGCCGACTCCA...AAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCCACTCGCCTGTCTTGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS TCA 90 bp ATAGTGGGGCTGAGATTAGGCGGGAGCTTTCGCCACCCACCTGCCTaGACAGATGGATGTGTGGACAGAGACATATCAGGAAGGGAAGGG +
Preference number: 5 (lower is better)
Translates to: IVGLRLGGSFRHPPA*TDGCVDRDISGREG
Trigger: CCCTTCCCTTCCTGATATGTCTCTGTCCACACATCCATCTGTTCAGGCAGGTGGGTGGCGAAAGCTCCCGCCTAATCTCAGCCCCACTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS GCA 90 bp CTCGATAGTGGGGCTGAGATTAGGCGGGAGCTTTCGCCACCCACCTaGCTGAACAGATGGATGTGTGGACAGAGACATATCAGGAAGGGA +
Preference number: 5 (lower is better)
Translates to: LDSGAEIRRELSPPT*LNRWMCGQRHIRKG
Trigger: TCCCTTCCTGATATGTCTCTGTCCACACATCCATCTGTTCAGGCAGGTGGGTGGCGAAAGCTCCCGCCTAATCTCAGCCCCACTATCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CCA 90 bp CTTAGGCCCACTCTCTCTCTTCTCAGCAGCAGGGACTTTACTTTTTaGCACCTCTCTCTTGGCCTGCACTGTCTGTGGAGGAGGTGGAGG +
Preference number: 5 (lower is better)
Translates to: LRPTLSLLSSRDFTF*HLSLGLHCLWRRWR
Trigger: CCTCCACCTCCTCCACAGACAGTGCAGGCCAAGAGAGAGGTGCCAAAAAGTAAAGTCCCTGCTGCTGAGAAGAGAGAGAGTGGGCCTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS GCA 90 bp TCTGGAAGGACCTGCACCCTCTGCACGGCAGCATTTACAGCAGTCTaGTTAGGCCCACTCTCTCTCTTCTCAGCAGCAGGGACTTTACTT +
Preference number: 5 (lower is better)
Translates to: SGRTCTLCTAAFTAV*LGPLSLFSAAGTLL
Trigger: AAGTAAAGTCCCTGCTGCTGAGAAGAGAGAGAGTGGGCCTAAGCAGACTGCTGTAAATGCTGCCGTGCAGAGGGTGCAGGTCCTTCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS GCA 90 bp GCGAAGTGTAACAAAGTATCCACGTCTGGAAGGACCTGCACCCTCTaGACGGCAGCATTTACAGCAGTCTGCTTAGGCCCACTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: AKCNKVSTSGRTCTL*TAAFTAVCLGPLSL
Trigger: GAGAGAGAGTGGGCCTAAGCAGACTGCTGTAAATGCTGCCGTGCAGAGGGTGCAGGTCCTTCCAGACGTGGATACTTTGTTACACTTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CCA 90 bp AAAGCTGGCGCACGCGCAGTATGTCCTTTTCTATTTGCTGGATCCTaGCTATTCTTCGCTGTGCACGCTTCTCCATGTCCTGGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: KAGARAVCPFLFAGS*LFFAVHASPCPGRC
Trigger: GCACCTGCCAGGACATGGAGAAGCGTGCACAGCGAAGAATAGCCAGGATCCAGCAAATAGAAAAGGACATACTGCGCGTGCGCCAGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066133.7
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CCA 90 bp TGTTTCTTGAGAAACAGACAGGGGTGTCTTCGACGTGGAAGGACTTaGGAGCATACCCGGATGCCTGAGGCTTACTGGGCTCTCCTTGTG +
Preference number: 5 (lower is better)
Translates to: CFLRNRQGCLRRGRT*EHTRMPEAYWALLV
Trigger: CACAAGGAGAGCCCAGTAAGCCTCAGGCATCCGGGTATGCTCCCAAGTCCTTCCACGTCGAAGACACCCCTGTCTGTTTCTCAAGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS TCA 90 bp CCTGGTGGGAGAATCTGGTCTAGAAGATGGAGAAAGGGATTCAAATaGGGCAGATTCCTCCAGTTTCCTCCTCAGGGTTGGGCTTGGGGC +
Preference number: 5 (lower is better)
Translates to: PGGRIWSRRWRKGFK*GRFLQFPPQGWAWG
Trigger: GCCCCAAGCCCAACCCTGAGGAGGAAACTGGAGGAATCTGCCTCATTTGAATCCCTTTCTCCATCTTCTAGACCAGATTCTCCCACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS TCA 90 bp CATCTGATAGATCAGAGGCTTGGATTCAGCACCACTGGCAGCACCTaGGGAAGCGCTCTGAGAAGCCATGCCTGTGGGAGAAATGTCACT +
Preference number: 5 (lower is better)
Translates to: HLIDQRLGFSTTGST*GSALRSHACGRNVT
Trigger: AGTGACATTTCTCCCACAGGCATGGCTTCTCAGAGCGCTTCCTCAGGTGCTGCCAGTGGTGCTGAATCCAAGCCTCTGATCTATCAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS GCA 90 bp CTTTCTGTGGCGAAGTGTAACAAAGTATCCACGTCTGGAAGGACCTaGACCCTCTGCACGGCAGCATTTACAGCAGTCTGCTTAGGCCCA +
Preference number: 5 (lower is better)
Translates to: LSVAKCNKVSTSGRT*TLCTAAFTAVCLGP
Trigger: TGGGCCTAAGCAGACTGCTGTAAATGCTGCCGTGCAGAGGGTGCAGGTCCTTCCAGACGTGGATACTTTGTTACACTTCGCCACAGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCTGGAGTCGGCTGGGTTaGGCTCTAGCATTCTGGGAC +
Preference number: 5 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPWSRLG*ALAFWD
Trigger: GTCCCAGAATGCTAGAGCCAAACCCAGCCGACTCCA...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GTGCCAAGACAGGCGAGTGGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTTCCTGCCTCTTGAGATaGAAGGCATGTTTGTCGGGA +
Preference number: 5 (lower is better)
Translates to: VPRQASGGQRMTLGGWFFSCLLR*KACLSG
Trigger: TCCCGACAAACATGCCTTCAATCTCAAGAGGCAGGA...AAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCCACTCGCCTGTCTTGGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCTTCCTCCATGTTCCTTaGGTGGGCACCTGGTTTTCC +
Preference number: 5 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCIFLHVP*VGTWFS
Trigger: GGAAAACCAGGTGCCCACCAAAGGAACATGGAGGAA...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS TCA 90 bp GAGACAGGGCTTGTACTAGAGGAGCTATTCCGAAGCCCTGGGATGTaGATCATCGTCCTGCCTCTTGAGATTGAAGGCATGTTTGTCGGG +
Preference number: 5 (lower is better)
Translates to: ETGLVLEELFRSPGM*IIVLPLEIEGMFVG
Trigger: CCCGACAAACATGCCTTCAATCTCAAGAGGCAGGACGATGATTCACATCCCAGGGCTTCGGAATAGCTCCTCTAGTACAAGCCCTGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS TCA 90 bp AGAGGCTTGGATTCAGCACCACTGGCAGCACCTGAGGAAGCGCTCTaGGAAGCCATGCCTGTGGGAGAAATGTCACTTTCCTTGATTTTC +
Preference number: 5 (lower is better)
Translates to: RGLDSAPLAAPEEAL*EAMPVGEMSLSLIF
Trigger: GAAAATCAAGGAAAGTGACATTTCTCCCACAGGCATGGCTTCTCAGAGCGCTTCCTCAGGTGCTGCCAGTGGTGCTGAATCCAAGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS TCA 90 bp GTTGTAATTAAAAGGTGTCACTCTGGCAGCAACAGTCCCGCTAGGTaGGCTGTGCTTGCTGGAGCTACTGGAACTGAAAGGGGTACGCTC +
Preference number: 5 (lower is better)
Translates to: VVIKRCHSGSNSPAR*AVLAGATGTERGTL
Trigger: GAGCGTACCCCTTTCAGTTCCAGTAGCTCCAGCAAGCACAGCTCACCTAGCGGGACTGTTGCTGCCAGAGTGACACCTTTTAATTACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS GCA 90 bp TGGGACTGTAAAAGCTGGCGCACGCGCAGTATGTCCTTTTCTATTTaGTGGATCCTGGCTATTCTTCGCTGTGCACGCTTCTCCATGTCC +
Preference number: 5 (lower is better)
Translates to: WDCKSWRTRSMSFSI*WILAILRCARFSMS
Trigger: GGACATGGAGAAGCGTGCACAGCGAAGAATAGCCAGGATCCAGCAAATAGAAAAGGACATACTGCGCGTGCGCCAGCTTTTACAGTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066133.7
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS GCA 90 bp TTAAAAGGTGTCACTCTGGCAGCAACAGTCCCGCTAGGTGAGCTGTaGTTGCTGGAGCTACTGGAACTGAAAGGGGTACGCTCTGCTATA +
Preference number: 5 (lower is better)
Translates to: LKGVTLAATVPLGEL*LLELLELKGVRSAI
Trigger: TATAGCAGAGCGTACCCCTTTCAGTTCCAGTAGCTCCAGCAAGCACAGCTCACCTAGCGGGACTGTTGCTGCCAGAGTGACACCTTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS GCA 90 bp ATCTGTCCAGAAGTCATAGTCTCATCTTCAATACTTCCCTGTAGCTaGTTAAGTACTTCCTGCCAGACGCTCGCTCCGCGGCCGCAAGCT +
Preference number: 5 (lower is better)
Translates to: ICPEVIVSSSILPCS*LSTSCQTLAPRPQA
Trigger: AGCTTGCGGCCGCGGAGCGAGCGTCTGGCAGGAAGTACTTAAGCAGCTACAGGGAAGTATTGAAGATGAGACTATGACTTCTGGACAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171187.8
CDS CCA 90 bp GACTGTAAAAGCTGGCGCACGCGCAGTATGTCCTTTTCTATTTGCTaGATCCTGGCTATTCTTCGCTGTGCACGCTTCTCCATGTCCTGG +
Preference number: 5 (lower is better)
Translates to: DCKSWRTRSMSFSIC*ILAILRCARFSMSW
Trigger: CCAGGACATGGAGAAGCGTGCACAGCGAAGAATAGCCAGGATCCAGCAAATAGAAAAGGACATACTGCGCGTGCGCCAGCTTTTACAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066133.7
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CCA 90 bp CAGGTTCCCGCCCGGTTGATTGGTAGTCTGGAAGGACTTTCAGAATaGGAGCGTGCAATATCATGCCGTTTTGTGGGCCTTCCGTCATTA +
Preference number: 5 (lower is better)
Translates to: QVPARLIGSLEGLSE*ERAISCRFVGLPSL
Trigger: TAATGACGGAAGGCCCACAAAACGGCATGATATTGCACGCTCCCATTCTGAAAGTCCTTCCAGACTACCAATCAACCGGGCGGGAACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCTCTCCTTCCTCTGCTTaGTTGTCATCCAGGTCTGGT +
Preference number: 5 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCISPSSA*LSSRSG
Trigger: ACCAGACCTGGATGACAACAAAGCAGAGGAAGGAGA...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GTGCCAAGACAGGCGAGTGGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTGAATCCTTGCTTTCTTaGCCCTTTCTTAACTCGGCC +
Preference number: 5 (lower is better)
Translates to: VPRQASGGQRMTLGGWFFESLLS*PFLNSA
Trigger: GGCCGAGTTAAGAAAGGGCAAAGAAAGCAAGGATTC...AAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCCACTCGCCTGTCTTGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GTGCCAAGACAGGCGAGTGGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTAGATTGAAGGCATGTTaGTCGGGAGGGGTTGTTTCA +
Preference number: 5 (lower is better)
Translates to: VPRQASGGQRMTLGGWFFRLKAC*SGGVVS
Trigger: TGAAACAACCCCTCCCGACAAACATGCCTTCAATCT...AAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCCACTCGCCTGTCTTGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS TCA 90 bp ACGAGGAATGTTTGCTGTGTTCACGCTTCCAGGTTCCCGCCCGGTTaGTTGGTAGTCTGGAAGGACTTTCAGAATGGGAGCGTGCAATAT +
Preference number: 5 (lower is better)
Translates to: TRNVCCVHASRFPPG*LVVWKDFQNGSVQY
Trigger: ATATTGCACGCTCCCATTCTGAAAGTCCTTCCAGACTACCAATCAACCGGGCGGGAACCTGGAAGCGTGAACACAGCAAACATTCCTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS GCA 90 bp AGAGACATATCAGGAAGGGAAGGGCTTAAAACTGGGGTCTGTGCCTaGGACCTGGTGGGAGAATCTGGTCTAGAAGATGGAGAAAGGGAT +
Preference number: 5 (lower is better)
Translates to: RDISGREGLKTGVCA*DLVGESGLEDGERD
Trigger: ATCCCTTTCTCCATCTTCTAGACCAGATTCTCCCACCAGGTCGCAGGCACAGACCCCAGTTTTAAGCCCTTCCCTTCCTGATATGTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS GCA 90 bp GGAACTGAAAGGGGTACGCTCTGCTATACACGTCTCAGCAGTCTCTaGTATAGAGACTGGGTTACTCTGTCCTGGTTTTGCCTCAGTTCC +
Preference number: 5 (lower is better)
Translates to: GTERGTLCYTRLSSL*YRDWVTLSWFCLSS
Trigger: GGAACTGAGGCAAAACCAGGACAGAGTAACCCAGTCTCTATAGCAGAGACTGCTGAGACGTGTATAGCAGAGCGTACCCCTTTCAGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CCA 90 bp CACTTAGGCTGGAGGAACAAGAAAACCCGTCTGGAGTACTTTCTGTaGCGAAGTGTAACAAAGTATCCACGTCTGGAAGGACCTGCACCC +
Preference number: 5 (lower is better)
Translates to: HLGWRNKKTRLEYFL*RSVTKYPRLEGPAP
Trigger: GGGTGCAGGTCCTTCCAGACGTGGATACTTTGTTACACTTCGCCACAGAAAGTACTCCAGACGGGTTTTCTTGTTCCTCCAGCCTAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CCA 90 bp TCCTCCATGTTCCTTTGGTGGGCACCTGGTTTTCCTTCATCTGTCTaGGTGCTGGCATGGAGCTCACATGCCTTTCATCCTCACTTTTTG +
Preference number: 5 (lower is better)
Translates to: SSMFLWWAPGFPSSV*VLAWSSHAFHPHFL
Trigger: CAAAAAGTGAGGATGAAAGGCATGTGAGCTCCATGCCAGCACCCAGACAGATGAAGGAAAACCAGGTGCCCACCAAAGGAACATGGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCACTCCAGCTGCCGTCTaGTCATGTCTGTCTGTAAGG +
Preference number: 5 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPTPAAV*SCLSVR
Trigger: CCTTACAGACAGACATGACAAGACGGCAGCTGGAGT...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp CATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATGGGGAACCACATTACGTCCTGGTCCATGCCTaGTTCGTGGGCTTCCTGCCA +
Preference number: 5 (lower is better)
Translates to: HAVKQSRLGKHIHGEPHYVLVHA*FVGFLP
Trigger: TGGCAGGAAGCCCACGAACAAGGCATGGACCAGGAC...GTAATGTGGTTCCCCATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp AATTATGGAGCGTGTGTGGAGGTTGGAGGATTCTGGGGACAGACTTCATGTCACCAACAGGAGCTGGCATaGGGTTTTTGTCCTGGTCCA +
Preference number: 5 (lower is better)
Translates to: NYGACVEVGGFWGQTSCHQQELA*GFCPGP
Trigger: TGGACCAGGACAAAAACCCAATGCCAGCTCCTGTTG...GTGACATGAAGTCTGTCCCCAGAATCCTCCAACCTCCACACACGCTCCATAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GTGCCAAGACAGGCGAGTGGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTTGGTGTTCTGGCTTCTaGCTTGTCTTTGCTCGTTTT +
Preference number: 5 (lower is better)
Translates to: VPRQASGGQRMTLGGWFFWCSGF*LVFARF
Trigger: AAAACGAGCAAAGACAAGCAAGAAGCCAGAACACCA...AAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCCACTCGCCTGTCTTGGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCACACAGGTAGCTGACTaGGTTTCCTTGCCACAGGTG +
Preference number: 5 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPTQVAD*VSLPQV
Trigger: CACCTGTGGCAAGGAAACCAAGTCAGCTACCTGTGT...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GTGCCAAGACAGGCGAGTGGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTTTTTCGCTCTCACTCTaGAGTCTTGAAGGCCTTTTC +
Preference number: 5 (lower is better)
Translates to: VPRQASGGQRMTLGGWFFFSLSL*SLEGLF
Trigger: GAAAAGGCCTTCAAGACTCAAGAGTGAGAGCGAAAA...AAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCCACTCGCCTGTCTTGGCAC
51% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp AATTATGGAGCGTGTGTGGAGGTTGGAGGATTCTGGGGACAGACTTCATGTCACGGCGGCTGCAGCAGCTaGGTGCAAACTACTTACTAT +
Preference number: 5 (lower is better)
Translates to: NYGACVEVGGFWGQTSCHGGCSS*VQTTYY
Trigger: ATAGTAAGTAGTTTGCACCAAGCTGCTGCAGCCGCC...GTGACATGAAGTCTGTCCCCAGAATCCTCCAACCTCCACACACGCTCCATAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp AATTATGGAGCGTGTGTGGAGGTTGGAGGATTCTGGGGACAGACTTCATGTCACTTCCTCCATGTTCCTTaGGTGGGCACCTGGTTTTCC +
Preference number: 5 (lower is better)
Translates to: NYGACVEVGGFWGQTSCHFLHVP*VGTWFS
Trigger: GGAAAACCAGGTGCCCACCAAAGGAACATGGAGGAA...GTGACATGAAGTCTGTCCCCAGAATCCTCCAACCTCCACACACGCTCCATAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS TCA 90 bp AGCATTGACAACAAGGAATACACCATTTCCACCTTTGTCCCCAGATaGCTTGTCAACCTTCGAGGAGCAGAGTGCGTGCCGCTAGAACTC +
Preference number: 5 (lower is better)
Translates to: SIDNKEYTISTFVPR*LVNLRGAECVPLEL
Trigger: GAGTTCTAGCGGCACGCACTCTGCTCCTCGAAGGTTGACAAGTCATCTGGGGACAAAGGTGGAAATGGTGTATTCCTTGTTGTCAATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
ENSMUST00000171187.8
CDS GCA 90 bp CTGTTTGCTGGATGTTTTATACTGGCTTGTGACTTACTAGCTGCCTaGTGGCTTGAGTTTGGTTCTGGGCGGCAGGTAACTTTGGCTTCG +
Preference number: 5 (lower is better)
Translates to: LFAGCFILACDLLAA*WLEFGSGRQVTLAS
Trigger: CGAAGCCAAAGTTACCTGCCGCCCAGAACCAAACTCAAGCCAGCAGGCAGCTAGTAAGTCACAAGCCAGTATAAAACATCCAGCAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS GCA 90 bp CTATCTGGTCCGTCTTTGGAGGACTGGGGGAAAGTGGGCTGTTTCTaGAGCACTGGTTTGGACTGTGCTCTGTTTGCTGGATGTTTTATA +
Preference number: 5 (lower is better)
Translates to: LSGPSLEDWGKVGCF*STGLDCALFAGCFI
Trigger: TATAAAACATCCAGCAAACAGAGCACAGTCCAAACCAGTGCTGCAGAAACAGCCCACTTTCCCCCAGTCCTCCAAAGACGGACCAGATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS GCA 90 bp CCATGTTCCTTTGGTGGGCACCTGGTTTTCCTTCATCTGTCTGGGTaGTGGCATGGAGCTCACATGCCTTTCATCCTCACTTTTTGCTTT +
Preference number: 5 (lower is better)
Translates to: PCSFGGHLVFLHLSG*WHGAHMPFILTFCF
Trigger: AAAGCAAAAAGTGAGGATGAAAGGCATGTGAGCTCCATGCCAGCACCCAGACAGATGAAGGAAAACCAGGTGCCCACCAAAGGAACATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS GCA 90 bp CTCAGCAGTCTCTGCTATAGAGACTGGGTTACTCTGTCCTGGTTTTaGCTCAGTTCCTTTCTGTTCTGGGGCCTCTACCTGAACAAAGGA +
Preference number: 5 (lower is better)
Translates to: LSSLCYRDWVTLSWF*LSSFLFWGLYLNKG
Trigger: TCCTTTGTTCAGGTAGAGGCCCCAGAACAGAAAGGAACTGAGGCAAAACCAGGACAGAGTAACCCAGTCTCTATAGCAGAGACTGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CCA 90 bp ATGTCACTTTCCTTGATTTTCCTCCATGTTCCTTTGGTGGGCACCTaGTTTTCCTTCATCTGTCTGGGTGCTGGCATGGAGCTCACATGC +
Preference number: 5 (lower is better)
Translates to: MSLSLIFLHVPLVGT*FSFICLGAGMELTC
Trigger: GCATGTGAGCTCCATGCCAGCACCCAGACAGATGAAGGAAAACCAGGTGCCCACCAAAGGAACATGGAGGAAAATCAAGGAAAGTGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CCA 90 bp GGTACGCTCTGCTATACACGTCTCAGCAGTCTCTGCTATAGAGACTaGGTTACTCTGTCCTGGTTTTGCCTCAGTTCCTTTCTGTTCTGG +
Preference number: 5 (lower is better)
Translates to: GTLCYTRLSSLCYRD*VTLSWFCLSSFLFW
Trigger: CCAGAACAGAAAGGAACTGAGGCAAAACCAGGACAGAGTAACCCAGTCTCTATAGCAGAGACTGCTGAGACGTGTATAGCAGAGCGTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCTCTGCAGACCTCGTTTaGATGAGGTTCCTGCATTTT +
Preference number: 5 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCISADLV*MRFLHF
Trigger: AAAATGCAGGAACCTCATCAAAACGAGGTCTGCAGA...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCCTTCTATCACATGCTTaGGTCTTGCCCACCTTTCAT +
Preference number: 5 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCILLSHA*VLPTFH
Trigger: ATGAAAGGTGGGCAAGACCAAAGCATGTGATAGAAG...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCTTCTTTGTGCTGAACTaGGACGCAGCTGATTCTGCC +
Preference number: 5 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPFFVLN*DAADSA
Trigger: GGCAGAATCAGCTGCGTCCAAGTTCAGCACAAAGAA...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCGCAAGTAGTGCCTTTTaGAGTCTGGCCATTTCTTTG +
Preference number: 5 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCIASSAF*SLAISL
Trigger: CAAAGAAATGGCCAGACTCAAAAAGGCACTACTTGC...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GTGCCAAGACAGGCGAGTGGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTAAAGCTAACATGTTTTaGTGCCTGCAGCCTATTCTG +
Preference number: 5 (lower is better)
Translates to: VPRQASGGQRMTLGGWFFKANMF*CLQPIL
Trigger: CAGAATAGGCTGCAGGCACAAAAACATGTTAGCTTT...AAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCCACTCGCCTGTCTTGGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCAGTCGAGGATGCTTGTaGGACTTGGTCCATTATCTT +
Preference number: 5 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCISRGCL*DLVHYL
Trigger: AAGATAATGGACCAAGTCCAACAAGCATCCTCGACT...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCTTGGCTTCGGAATCCTaGCTTTCTTTGCCCTTTCTT +
Preference number: 5 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCILASES*LSLPFL
Trigger: AAGAAAGGGCAAAGAAAGCAAGGATTCCGAAGCCAA...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp AATTATGGAGCGTGTGTGGAGGTTGGAGGATTCTGGGGACAGACTTCATGTCACATGGCGTTTAGGACTTaGGGCTCCACTGGATTCTGT +
Preference number: 5 (lower is better)
Translates to: NYGACVEVGGFWGQTSCHMAFRT*GSTGFC
Trigger: ACAGAATCCAGTGGAGCCCAAAGTCCTAAACGCCAT...GTGACATGAAGTCTGTCCCCAGAATCCTCCAACCTCCACACACGCTCCATAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CCA 90 bp TTCCTCCTCAGGGTTGGGCTTGGGGCTTCTTTGATGAAAGTAGACTaGCGTACTAATGCAGGCCTTTCTGATCTGTCTGATTCACTTCCA +
Preference number: 5 (lower is better)
Translates to: FLLRVGLGASLMKVD*RTNAGLSDLSDSLP
Trigger: TGGAAGTGAATCAGACAGATCAGAAAGGCCTGCATTAGTACGCCAGTCTACTTTCATCAAAGAAGCCCCAAGCCCAACCCTGAGGAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCTCTCTCAACGTCTTTTaGCTATTTACATCTGCTCGC +
Preference number: 5 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCISLNVF*LFTSAR
Trigger: GCGAGCAGATGTAAATAGCAAAAAGACGTTGAGAGA...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp AATTATGGAGCGTGTGTGGAGGTTGGAGGATTCTGGGGACAGACTTCATGTCACTCACATGCTTTGGTCTaGCCCACCTTTCATTCTGTG +
Preference number: 5 (lower is better)
Translates to: NYGACVEVGGFWGQTSCHSHALV*PTFHSV
Trigger: CACAGAATGAAAGGTGGGCAAGACCAAAGCATGTGA...GTGACATGAAGTCTGTCCCCAGAATCCTCCAACCTCCACACACGCTCCATAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GTGCCAAGACAGGCGAGTGGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTTTGTCCAAAATGTGGTaGGAATTTGAGGTGTTTGTC +
Preference number: 5 (lower is better)
Translates to: VPRQASGGQRMTLGGWFFLSKMW*EFEVFV
Trigger: GACAAACACCTCAAATTCCAACCACATTTTGGACAA...AAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCCACTCGCCTGTCTTGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp AATTATGGAGCGTGTGTGGAGGTTGGAGGATTCTGGGGACAGACTTCATGTCACCAGGTGGAGGTAATTTaGAAGCAGTCTGGGCTAGTT +
Preference number: 5 (lower is better)
Translates to: NYGACVEVGGFWGQTSCHQVEVI*KQSGLV
Trigger: AACTAGCCCAGACTGCTTCAAAATTACCTCCACCTG...GTGACATGAAGTCTGTCCCCAGAATCCTCCAACCTCCACACACGCTCCATAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCAAAGCTAACATGTTTTaGTGCCTGCAGCCTATTCTG +
Preference number: 5 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCIKANMF*CLQPIL
Trigger: CAGAATAGGCTGCAGGCACAAAAACATGTTAGCTTT...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GTGCCAAGACAGGCGAGTGGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTTTGTGGCTTTTTCCTTaGGGCATAGCAGAATTGATA +
Preference number: 5 (lower is better)
Translates to: VPRQASGGQRMTLGGWFFLWLFP*GIAELI
Trigger: TATCAATTCTGCTATGCCCAAAGGAAAAAGCCACAA...AAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCCACTCGCCTGTCTTGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCCGCACTCTGTCTTCATaGTTAGGTAGCTTTTCATTG +
Preference number: 5 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCIRTLSS*LGSFSL
Trigger: CAATGAAAAGCTACCTAACAATGAAGACAGAGTGCG...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCTCATCGTCCTGCCTCTaGAGATTGAAGGCATGTTTG +
Preference number: 5 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPSSSCL*RLKACL
Trigger: CAAACATGCCTTCAATCTCAAGAGGCAGGACGATGA...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS TCA 90 bp GAGGACTTAGTTGAAGCAGTACTGGGAGATGATGTTCTGGGCAGCTaGGACAGTTTGTTAGGAGGGCTTATTCCATTTCTACCAGGGGAA +
Preference number: 5 (lower is better)
Translates to: EDLVEAVLGDDVLGS*DSLLGGLIPFLPGE
Trigger: TTCCCCTGGTAGAAATGGAATAAGCCCTCCTAACAAACTGTCTCAGCTGCCCAGAACATCATCTCCCAGTACTGCTTCAACTAAGTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS GCA 90 bp GAAATTGAGTTTCGCCCTGGAGACTGCATTGGCCTACTTAATGGTTaGTGTGTAGGTCTTGAGGGAGTGGAGTCTCTAGATCCTGATCTA +
Preference number: 5 (lower is better)
Translates to: EIEFRPGDCIGLLNG*CVGLEGVESLDPDL
Trigger: TAGATCAGGATCTAGAGACTCCACTCCCTCAAGACCTACACAGCAACCATTAAGTAGGCCAATGCAGTCTCCAGGGCGAAACTCAATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GACAAGAGTGATGCACTCAGAGGCAGTGGACATCTTGACTTTCGTATTCCTAAGTTCTTTGTGCTGAACTaGGACGCAGCTGATTCTGCC +
Preference number: 5 (lower is better)
Translates to: DKSDALRGSGHLDFRIPKFFVLN*DAADSA
Trigger: GGCAGAATCAGCTGCGTCCAAGTTCAGCACAAAGAA...CTTAGGAATACGAAAGTCAAGATGTCCACTGCCTCTGAGTGCATCACTCTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp CATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATGGGGAACCACATTACCTGCTGGAACTTCAGTaGCAGGATCTTCAGCTGACC +
Preference number: 5 (lower is better)
Translates to: HAVKQSRLGKHIHGEPHYLLELQ*QDLQLT
Trigger: GGTCAGCTGAAGATCCTGCAACTGAAGTTCCAGCAG...GTAATGTGGTTCCCCATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCTTTGGTAAGATTTTGTaGGCTCAGCTGTCTACCTGG +
Preference number: 5 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPFGKIL*AQLSTW
Trigger: CCAGGTAGACAGCTGAGCCAACAAAATCTTACCAAA...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCATACTGCTGGCATTCTaGGATAAACTTGCTTGTTTG +
Preference number: 5 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCIILLAF*DKLACL
Trigger: CAAACAAGCAAGTTTATCCAAGAATGCCAGCAGTAT...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CCA 90 bp TCTCTAGATCCTGATCTAGAAGACCCCTTATTTGACCCACTGATTTaGGAAGTTTGCCTGGTGATAGGGCTAAGCTCTGACTTTCCTGCT +
Preference number: 5 (lower is better)
Translates to: SLDPDLEDPLFDPLI*EVCLVIGLSSDFPA
Trigger: AGCAGGAAAGTCAGAGCTTAGCCCTATCACCAGGCAAACTTCCCAAATCAGTGGGTCAAATAAGGGGTCTTCTAGATCAGGATCTAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp CATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATGGGGAACCACATTACAGCGAAGGGACATTTTaGAGCGTAGTTTCACTCCGG +
Preference number: 5 (lower is better)
Translates to: HAVKQSRLGKHIHGEPHYSEGTF*SVVSLR
Trigger: CCGGAGTGAAACTACGCTCAAAAATGTCCCTTCGCT...GTAATGTGGTTCCCCATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp ACCGTCAGCTTCATTCATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATCAACAGGAGCTGGCATaGGGTTTTTGTCCTGGTCCA +
Preference number: 5 (lower is better)
Translates to: TVSFIHAVKQSRLGKHIHQQELA*GFCPGP
Trigger: TGGACCAGGACAAAAACCCAATGCCAGCTCCTGTTG...ATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATGAATGAAGCTGACGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GGAGGTCAGAGGATGACTTTAGGGGGCTGGTTCTTTCCTTCTGCCATGTGCATCAAAGTTTGTAGGCAATaGTTCTCTCTTAGGATTTGC +
Preference number: 5 (lower is better)
Translates to: GGQRMTLGGWFFPSAMCIKVCRQ*FSLRIC
Trigger: GCAAATCCTAAGAGAGAACAATTGCCTACAAACTTT...GATGCACATGGCAGAAGGAAAGAACCAGCCCCCTAAAGTCATCCTCTGACCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTCTGCTGGAACTTCAGTaGCAGGATCTTCAGCTGACC +
Preference number: 5 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSLLELQ*QDLQLT
Trigger: GGTCAGCTGAAGATCCTGCAACTGAAGTTCCAGCAG...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGTTTGGCACCTCTCTCTaGGCCTGCACTGTCTGTGGA +
Preference number: 5 (lower is better)
Translates to: STKNSIIHRTYSRKDASMFGTSL*ACTVCG
Trigger: TCCACAGACAGTGCAGGCCAAGAGAGAGGTGCCAAA...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCTTAGGTAGCTTTTCATaGAAGGCCTTGGCATTGGTT +
Preference number: 5 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPLGSFS*KALALV
Trigger: AACCAATGCCAAGGCCTTCAATGAAAAGCTACCTAA...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTATTAGAGGCTGGAGTCTaGAGGGGTGGGCCTTTCTTA +
Preference number: 5 (lower is better)
Translates to: TRNEREPAVTYIPISHCLLEAGV*RGGPFL
Trigger: TAAGAAAGGCCCACCCCTCAAGACTCCAGCCTCTAA...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp AATTATGGAGCGTGTGTGGAGGTTGGAGGATTCTGGGGACAGACTTCATGTCACTTGTTTGGTAAGATTTaGTTGGCTCAGCTGTCTACC +
Preference number: 5 (lower is better)
Translates to: NYGACVEVGGFWGQTSCHLFGKI*LAQLST
Trigger: GGTAGACAGCTGAGCCAACAAAATCTTACCAAACAA...GTGACATGAAGTCTGTCCCCAGAATCCTCCAACCTCCACACACGCTCCATAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTCGTCCAGATCTAGGGTaGTTAATGGGGCAGTCCTCA +
Preference number: 5 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSRPDLG*LMGQSS
Trigger: TGAGGACTGCCCCATTAACAACCCTAGATCTGGACG...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS TCA 90 bp TCATCAAATGAAAGCTTCATTAGAACACACACAGCAGGACAGATCTaGTGCTCAACAGGAGCTGGCATTGGGTTTTTGTCCTGGTCCATG +
Preference number: 5 (lower is better)
Translates to: SSNESFIRTHTAGQI*CSTGAGIGFLSWSM
Trigger: CATGGACCAGGACAAAAACCCAATGCCAGCTCCTGTTGAGCATCAGATCTGTCCTGCTGTGTGTGTTCTAATGAAGCTTTCATTTGATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
ENSMUST00000171187.8
CDS-3UTR CAA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAATTGTCCCCAGATGACTaGTCAACCTTCGAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPELSPDD*STFEEQ
Trigger: CTGCTCCTCGAAGGTTGACAAGTCATCTGGGGACAA...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTATGTCTAAACTTCCCCTaGAGGAAGAAGAGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: TRNEREPAVTYIPISHCLCLNFP*RKKSWA
Trigger: TGCCCAGCTCTTCTTCCTCAAGGGGAAGTTTAGACA...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GACAAGAGTGATGCACTCAGAGGCAGTGGACATCTTGACTTTCGTATTCCTAAGTGGTGTTCTGGCTTCTaGCTTGTCTTTGCTCGTTTT +
Preference number: 5 (lower is better)
Translates to: DKSDALRGSGHLDFRIPKWCSGF*LVFARF
Trigger: AAAACGAGCAAAGACAAGCAAGAAGCCAGAACACCA...CTTAGGAATACGAAAGTCAAGATGTCCACTGCCTCTGAGTGCATCACTCTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCAATCTGCTTCCTGTGTaGTCTGATCACATCCTATTT +
Preference number: 5 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPNLLPV*SDHILF
Trigger: AAATAGGATGTGATCAGACAACACAGGAAGCAGATT...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCCTTTATTATGCCTGGTaGATTCTGAAGATAAGCCAG +
Preference number: 5 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPLYYAW*ILKISQ
Trigger: CTGGCTTATCTTCAGAATCAACCAGGCATAATAAAG...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp AGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACTTTGGCACCTCTCTCTaGGCCTGCACTGTCTGTGGA +
Preference number: 5 (lower is better)
Translates to: SIYLVDQELICLLRAVLYFGTSL*ACTVCG
Trigger: TCCACAGACAGTGCAGGCCAAGAGAGAGGTGCCAAA...GTACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp ACCGTCAGCTTCATTCATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATCAGGGACTTTACTTTTaGGCACCTCTCTCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: TVSFIHAVKQSRLGKHIHQGLYF*APLSWP
Trigger: AGGCCAAGAGAGAGGTGCCAAAAAGTAAAGTCCCTG...ATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATGAATGAAGCTGACGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTCCTTCCTCTGCTTTGTaGTCATCCAGGTCTGGTGTA +
Preference number: 5 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSPSSAL*SSRSGV
Trigger: TACACCAGACCTGGATGACAACAAAGCAGAGGAAGG...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp ACCGTCAGCTTCATTCATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATTCTCCTTCCTCTGCTTaGTTGTCATCCAGGTCTGGT +
Preference number: 5 (lower is better)
Translates to: TVSFIHAVKQSRLGKHIHSPSSA*LSSRSG
Trigger: ACCAGACCTGGATGACAACAAAGCAGAGGAAGGAGA...ATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATGAATGAAGCTGACGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GACAAGAGTGATGCACTCAGAGGCAGTGGACATCTTGACTTTCGTATTCCTAAGTTGGCTTCGGAATCCTaGCTTTCTTTGCCCTTTCTT +
Preference number: 5 (lower is better)
Translates to: DKSDALRGSGHLDFRIPKLASES*LSLPFL
Trigger: AAGAAAGGGCAAAGAAAGCAAGGATTCCGAAGCCAA...CTTAGGAATACGAAAGTCAAGATGTCCACTGCCTCTGAGTGCATCACTCTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGGCAGTTTTTCGTCAGTaGCTGCCCCTCTATCTGGTC +
Preference number: 5 (lower is better)
Translates to: STKNSIIHRTYSRKDASMAVFRQ*LPLYLV
Trigger: GACCAGATAGAGGGGCAGCAACTGACGAAAAACTGC...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAAGCAGTTTTTCGTCAGTaGCTGCCCCTCTATCTGGTC +
Preference number: 5 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPEAVFRQ*LPLYLV
Trigger: GACCAGATAGAGGGGCAGCAACTGACGAAAAACTGC...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCACCTTTTTCCCGCCTTaGATTCCTTTGTTTTCAGAT +
Preference number: 5 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPTFFPP*IPLFSD
Trigger: ATCTGAAAACAAAGGAATCAAAGGCGGGAAAAAGGT...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp CATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATGGGGAACCACATTACGTTTGTCGGGAGGGGTaGTTTCATTTGGCTGGAAAT +
Preference number: 5 (lower is better)
Translates to: HAVKQSRLGKHIHGEPHYVCREG*FHLAGN
Trigger: ATTTCCAGCCAAATGAAACAACCCCTCCCGACAAAC...GTAATGTGGTTCCCCATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTTCCTGCCTCTTGAGATaGAAGGCATGTTTGTCGGGA +
Preference number: 5 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSSCLLR*KACLSG
Trigger: TCCCGACAAACATGCCTTCAATCTCAAGAGGCAGGA...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAAGGGCTTGGGGCTTCTTaGATGAAAGTAGACTGGCGT +
Preference number: 5 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPEGLGAS*MKVDWR
Trigger: ACGCCAGTCTACTTTCATCAAAGAAGCCCCAAGCCC...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGGGGCTTGGGGCTTCTTaGATGAAAGTAGACTGGCGT +
Preference number: 5 (lower is better)
Translates to: STKNSIIHRTYSRKDASMGLGAS*MKVDWR
Trigger: ACGCCAGTCTACTTTCATCAAAGAAGCCCCAAGCCC...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCGAAATGTCACTTTCCTaGATTTTCCTCCATGTTCCT +
Preference number: 5 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPEMSLS*IFLHVP
Trigger: AGGAACATGGAGGAAAATCAAGGAAAGTGACATTTC...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp ACAGCTGTATTCTCGCTGCTTGGAGAGAGATGTTCAGGTTTAGTGCTTTGTGCTGCACTCAAAACGCTTTaGAGGGTTGATTCCAAGTTC +
Preference number: 5 (lower is better)
Translates to: TAVFSLLGERCSGLVLCAALKTL*RVDSKF
Trigger: GAACTTGGAATCAACCCTCAAAAGCGTTTTGAGTGC...AGCACAAAGCACTAAACCTGAACATCTCTCTCCAAGCAGCGAGAATACAGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
CDS TCA 90 bp TCCTTCCTCTGCTTTGTTGTCATCCAGGTCTGGTGTAACTATAGATaGGATTTTTCCTCGCTGAGCATCATCTGTACTTCTGCCTTCTGT +
Preference number: 5 (lower is better)
Translates to: SFLCFVVIQVWCNYR*DFSSLSIICTSAFC
Trigger: ACAGAAGGCAGAAGTACAGATGATGCTCAGCGAGGAAAAATCTCATCTATAGTTACACCAGACCTGGATGACAACAAAGCAGAGGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CCA 90 bp GAATTTCCCAACAATACAGAGTCTTTGTCATTGCCATGTAAAAGCTaGATGAGGAGAGGAAGACATCCAGACTGCCGCATGGATATACAG +
Preference number: 5 (lower is better)
Translates to: EFPNNTESLSLPCKS*MRRGRHPDCRMDIQ
Trigger: CTGTATATCCATGCGGCAGTCTGGATGTCTTCCTCTCCTCATCCAGCTTTTACATGGCAATGACAAAGACTCTGTATTGTTGGGAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
ENSMUST00000171187.8
CDS CCA 90 bp ACACTTGCAATAACCTGCTGTAAGTCTTCACTCTCAGATTTTAACTaGGCCACAAGTGCTCTCATGCAGCCTTTCATAGAACACAGCGTA +
Preference number: 5 (lower is better)
Translates to: TLAITCCKSSLSDFN*ATSALMQPFIEHSV
Trigger: TACGCTGTGTTCTATGAAAGGCTGCATGAGAGCACTTGTGGCCCAGTTAAAATCTGAGAGTGAAGACTTACAGCAGGTTATTGCAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
ENSMUST00000171187.8
CDS CCA 90 bp CCTCTTGAGATTGAAGGCATGTTTGTCGGGAGGGGTTGTTTCATTTaGCTGGAAATTTCTGAATTGGAGCGAATCTTTCCCGTAATCAAG +
Preference number: 5 (lower is better)
Translates to: PLEIEGMFVGRGCFI*LEISELERIFPVIK
Trigger: CTTGATTACGGGAAAGATTCGCTCCAATTCAGAAATTTCCAGCCAAATGAAACAACCCCTCCCGACAAACATGCCTTCAATCTCAAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GACAAGAGTGATGCACTCAGAGGCAGTGGACATCTTGACTTTCGTATTCCTAAGTGTGAGGTTCTGAAGTaGAGCATAATACCAGTCCTT +
Preference number: 5 (lower is better)
Translates to: DKSDALRGSGHLDFRIPKCEVLK*SIIPVL
Trigger: AAGGACTGGTATTATGCTCAACTTCAGAACCTCACA...CTTAGGAATACGAAAGTCAAGATGTCCACTGCCTCTGAGTGCATCACTCTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GTAAGAGCTAAAAGAGCCTTTGTGACAGTTAAGAATCAGAAGCATGTCTTTGTCACTCCAGCTGCCGTCTaGTCATGTCTGTCTGTAAGG +
Preference number: 5 (lower is better)
Translates to: VRAKRAFVTVKNQKHVFVTPAAV*SCLSVR
Trigger: CCTTACAGACAGACATGACAAGACGGCAGCTGGAGT...GACAAAGACATGCTTCTGATTCTTAACTGTCACAAAGGCTCTTTTAGCTCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066133.7
CDS-3UTR CAA 90 bp AGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACACTCCAGCTGCCGTCTaGTCATGTCTGTCTGTAAGG +
Preference number: 5 (lower is better)
Translates to: SIYLVDQELICLLRAVLYTPAAV*SCLSVR
Trigger: CCTTACAGACAGACATGACAAGACGGCAGCTGGAGT...GTACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCGTCATGTTTCCAGTATaGAAATTGTCTGACCTACTA +
Preference number: 5 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPVMFPV*KLSDLL
Trigger: TAGTAGGTCAGACAATTTCAATACTGGAAACATGAC...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCTTCTTCTTCTTCATGTaGTTCTTCCTCAGAATAACG +
Preference number: 5 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPFFFFM*FFLRIT
Trigger: CGTTATTCTGAGGAAGAACAACATGAAGAAGAAGAA...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTCTTTTGGAGGGAGACTaGGCTCCTGAAGAAAACTCA +
Preference number: 5 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSLLEGD*APEENS
Trigger: TGAGTTTTCTTCAGGAGCCAAGTCTCCCTCCAAAAG...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAAGCTGACTTGGTTTCCTaGCCACAGGTGGAGGTAATT +
Preference number: 5 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPEADLVS*PQVEVI
Trigger: AATTACCTCCACCTGTGGCAAGGAAACCAAGTCAGC...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTATTGGAGGGGACTCTATaGTCAGATCACTTAGAGACG +
Preference number: 5 (lower is better)
Translates to: TRNEREPAVTYIPISHCLLEGTL*SDHLET
Trigger: CGTCTCTAAGTGATCTGACAATAGAGTCCCCTCCAA...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCTTGGGCATAGCAGAATaGATACATTCTGCAAGAATA +
Preference number: 5 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPLGIAE*IHSARI
Trigger: TATTCTTGCAGAATGTATCAATTCTGCTATGCCCAA...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GGGTTTAATCCAGCAACTCCATCTTCAAGGGACAACACAAGACAGACCCTTCCCCATTGGTTTGTAAGCTaGGTTTCTTTGAGTCTTTGT +
Preference number: 5 (lower is better)
Translates to: GFNPATPSSRDNTRQTLPHWFVS*VSLSLC
Trigger: ACAAAGACTCAAAGAAACCAAGCTTACAAACCAATG...GGGAAGGGTCTGTCTTGTGTTGTCCCTTGAAGATGGAGTTGCTGGATTAAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGTTCTGCAGCACTGGTTaGGACTGTGCTCTGTTTGCT +
Preference number: 5 (lower is better)
Translates to: STKNSIIHRTYSRKDASMFCSTG*DCALFA
Trigger: AGCAAACAGAGCACAGTCCAAACCAGTGCTGCAGAA...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp AGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACGGCGGCTGCAGCAGCTaGGTGCAAACTACTTACTAT +
Preference number: 5 (lower is better)
Translates to: SIYLVDQELICLLRAVLYGGCSS*VQTTYY
Trigger: ATAGTAAGTAGTTTGCACCAAGCTGCTGCAGCCGCC...GTACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTAAGATTGAAGGCATGTTaGTCGGGAGGGGTTGTTTCA +
Preference number: 5 (lower is better)
Translates to: TRNEREPAVTYIPISHCLRLKAC*SGGVVS
Trigger: TGAAACAACCCCTCCCGACAAACATGCCTTCAATCT...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTAGCCCTGGAGACTGCATaGGCCTACTTAATGGTTGCT +
Preference number: 5 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVALETA*AYLMVA
Trigger: AGCAACCATTAAGTAGGCCAATGCAGTCTCCAGGGC...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp CTGAATTTCCCTTTCCATAGCCTCTTACTGCCCATCGAAACTAAGTATTTTAAGGCCCTGGAGACTGCATaGGCCTACTTAATGGTTGCT +
Preference number: 5 (lower is better)
Translates to: LNFPFHSLLLPIETKYFKALETA*AYLMVA
Trigger: AGCAACCATTAAGTAGGCCAATGCAGTCTCCAGGGC...CTTAAAATACTTAGTTTCGATGGGCAGTAAGAGGCTATGGAAAGGGAAATTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGATGGCGTTTAGGACTTaGGGCTCCACTGGATTCTGT +
Preference number: 5 (lower is better)
Translates to: STKNSIIHRTYSRKDASMMAFRT*GSTGFC
Trigger: ACAGAATCCAGTGGAGCCCAAAGTCCTAAACGCCAT...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS TCA 90 bp CTAGAAAGTTCTACCTTTTTATTTGACCCATTGCCGTTACTCATCTaGTTCAGTCCTTTAGATGCCGACTCACTTCTGGGGATACTGCTG +
Preference number: 5 (lower is better)
Translates to: LESSTFLFDPLPLLI*FSPLDADSLLGILL
Trigger: CAGCAGTATCCCCAGAAGTGAGTCGGCATCTAAAGGACTGAATCAGATGAGTAACGGCAATGGGTCAAATAAAAAGGTAGAACTTTCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTGCTCTTGTCGAAGATTaGAGTTCTCCATCTTCAGTG +
Preference number: 5 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSALVED*SSPSSV
Trigger: CACTGAAGATGGAGAACTCAAATCTTCGACAAGAGC...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp ATGGGAATTTCGTCTCCAATAGGTGGAATGGACTCTTCTTTTACTTCTAACATTTTGTCCCCAGATGACTaGTCAACCTTCGAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: MGISSPIGGMDSSFTSNILSPDD*STFEEQ
Trigger: CTGCTCCTCGAAGGTTGACAAGTCATCTGGGGACAA...AATGTTAGAAGTAAAAGAAGAGTCCATTCCACCTATTGGAGACGAAATTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTACCCCAAGTTCATTCATaGCATGCCTATGCTCTTCAT +
Preference number: 5 (lower is better)
Translates to: TRNEREPAVTYIPISHCLPQVHS*HAYALH
Trigger: ATGAAGAGCATAGGCATGCAATGAATGAACTTGGGG...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GACAAGAGTGATGCACTCAGAGGCAGTGGACATCTTGACTTTCGTATTCCTAAGGCACTCAAAACGCTTTaGAGGGTTGATTCCTTTTTA +
Preference number: 5 (lower is better)
Translates to: DKSDALRGSGHLDFRIPKALKTL*RVDSFL
Trigger: TAAAAAGGAATCAACCCTCAAAAGCGTTTTGAGTGC...CTTAGGAATACGAAAGTCAAGATGTCCACTGCCTCTGAGTGCATCACTCTTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp AGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACTGTCTAAACTTCCCCTaGAGGAAGAAGAGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: SIYLVDQELICLLRAVLYCLNFP*RKKSWA
Trigger: TGCCCAGCTCTTCTTCCTCAAGGGGAAGTTTAGACA...GTACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTACTTCTATCACATGCTTaGGTCTTGCCCACCTTTCAT +
Preference number: 5 (lower is better)
Translates to: TRNEREPAVTYIPISHCLLLSHA*VLPTFH
Trigger: ATGAAAGGTGGGCAAGACCAAAGCATGTGATAGAAG...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTAGTTCTGGCTTCTTGCTaGTCTTTGCTCGTTTTGCTT +
Preference number: 5 (lower is better)
Translates to: TRNEREPAVTYIPISHCLVLASC*SLLVLL
Trigger: AAGCAAAACGAGCAAAGACAAGCAAGAAGCCAGAAC...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACAGGGACTTTACTTTTaGGCACCTCTCTCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVQGLYF*APLSWP
Trigger: AGGCCAAGAGAGAGGTGCCAAAAAGTAAAGTCCCTG...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTAGCTGACTTGGTTTCCTaGCCACAGGTGGAGGTAATT +
Preference number: 5 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVADLVS*PQVEVI
Trigger: AATTACCTCCACCTGTGGCAAGGAAACCAAGTCAGC...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp ATGGGAATTTCGTCTCCAATAGGTGGAATGGACTCTTCTTTTACTTCTAACATTACACAGGTAGCTGACTaGGTTTCCTTGCCACAGGTG +
Preference number: 5 (lower is better)
Translates to: MGISSPIGGMDSSFTSNITQVAD*VSLPQV
Trigger: CACCTGTGGCAAGGAAACCAAGTCAGCTACCTGTGT...AATGTTAGAAGTAAAAGAAGAGTCCATTCCACCTATTGGAGACGAAATTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGTTGGAGGGGACTCTATaGTCAGATCACTTAGAGACG +
Preference number: 5 (lower is better)
Translates to: STKNSIIHRTYSRKDASMLEGTL*SDHLET
Trigger: CGTCTCTAAGTGATCTGACAATAGAGTCCCCTCCAA...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp AGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACCCTTCCTCTGCTTTGTaGTCATCCAGGTCTGGTGTA +
Preference number: 5 (lower is better)
Translates to: SIYLVDQELICLLRAVLYPSSAL*SSRSGV
Trigger: TACACCAGACCTGGATGACAACAAAGCAGAGGAAGG...GTACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTAAGTCGAGGATGCTTGTaGGACTTGGTCCATTATCTT +
Preference number: 5 (lower is better)
Translates to: TRNEREPAVTYIPISHCLSRGCL*DLVHYL
Trigger: AAGATAATGGACCAAGTCCAACAAGCATCCTCGACT...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAAGAATCCTTGCTTTCTTaGCCCTTTCTTAACTCGGCC +
Preference number: 5 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPEESLLS*PFLNSA
Trigger: GGCCGAGTTAAGAAAGGGCAAAGAAAGCAAGGATTC...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTTGGACTGTGCTCTGTTaGCTGGATGTTTTATACTGG +
Preference number: 5 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSWTVLC*LDVLYW
Trigger: CCAGTATAAAACATCCAGCAAACAGAGCACAGTCCA...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTATTCTGCAGCACTGGTTaGGACTGTGCTCTGTTTGCT +
Preference number: 5 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVFCSTG*DCALFA
Trigger: AGCAAACAGAGCACAGTCCAAACCAGTGCTGCAGAA...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp ACCGTCAGCTTCATTCATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATTTTTCGCTCTCACTCTaGAGTCTTGAAGGCCTTTTC +
Preference number: 5 (lower is better)
Translates to: TVSFIHAVKQSRLGKHIHFSLSL*SLEGLF
Trigger: GAAAAGGCCTTCAAGACTCAAGAGTGAGAGCGAAAA...ATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATGAATGAAGCTGACGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GACAAGAGTGATGCACTCAGAGGCAGTGGACATCTTGACTTTCGTATTCCTAAGACCTTTTTCCCGCCTTaGATTCCTTTGTTTTCAGAT +
Preference number: 5 (lower is better)
Translates to: DKSDALRGSGHLDFRIPKTFFPP*IPLFSD
Trigger: ATCTGAAAACAAAGGAATCAAAGGCGGGAAAAAGGT...CTTAGGAATACGAAAGTCAAGATGTCCACTGCCTCTGAGTGCATCACTCTTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGGTTTGTCGGGAGGGGTaGTTTCATTTGGCTGGAAAT +
Preference number: 5 (lower is better)
Translates to: STKNSIIHRTYSRKDASMVCREG*FHLAGN
Trigger: ATTTCCAGCCAAATGAAACAACCCCTCCCGACAAAC...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAATCATCGTCCTGCCTCTaGAGATTGAAGGCATGTTTG +
Preference number: 5 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPESSSCL*RLKACL
Trigger: CAAACATGCCTTCAATCTCAAGAGGCAGGACGATGA...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp ATGGGAATTTCGTCTCCAATAGGTGGAATGGACTCTTCTTTTACTTCTAACATTTTAGAGGCTGGAGTCTaGAGGGGTGGGCCTTTCTTA +
Preference number: 5 (lower is better)
Translates to: MGISSPIGGMDSSFTSNILEAGV*RGGPFL
Trigger: TAAGAAAGGCCCACCCCTCAAGACTCCAGCCTCTAA...AATGTTAGAAGTAAAAGAAGAGTCCATTCCACCTATTGGAGACGAAATTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp CATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATGGGGAACCACATTACTTGTTTGGTAAGATTTaGTTGGCTCAGCTGTCTACC +
Preference number: 5 (lower is better)
Translates to: HAVKQSRLGKHIHGEPHYLFGKI*LAQLST
Trigger: GGTAGACAGCTGAGCCAACAAAATCTTACCAAACAA...GTAATGTGGTTCCCCATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp ATGGGAATTTCGTCTCCAATAGGTGGAATGGACTCTTCTTTTACTTCTAACATTCGTCCAGATCTAGGGTaGTTAATGGGGCAGTCCTCA +
Preference number: 5 (lower is better)
Translates to: MGISSPIGGMDSSFTSNIRPDLG*LMGQSS
Trigger: TGAGGACTGCCCCATTAACAACCCTAGATCTGGACG...AATGTTAGAAGTAAAAGAAGAGTCCATTCCACCTATTGGAGACGAAATTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS TCA 90 bp GAGCTGGACATAGCTAGCAAAGTTCGTGACATATCGTCCTTATCATaGGTACCAAGCATTGACAACAAGGAATACACCATTTCCACCTTT +
Preference number: 5 (lower is better)
Translates to: ELDIASKVRDISSLS*VPSIDNKEYTISTF
Trigger: AAAGGTGGAAATGGTGTATTCCTTGTTGTCAATGCTTGGTACTCATGATAAGGACGATATGTCACGAACTTTGCTAGCTATGTCCAGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
ENSMUST00000171187.8
CDS CCA 90 bp GCTTGTTGGACTTGGTCCATTATCTTTTTCACTCGGAAAGGCTTGTaGCTTTTTCCTTTGGGCATAGCAGAATTGATACATTCTGCAAGA +
Preference number: 5 (lower is better)
Translates to: ACWTWSIIFFTRKGL*LFPLGIAELIHSAR
Trigger: TCTTGCAGAATGTATCAATTCTGCTATGCCCAAAGGAAAAAGCCACAAGCCTTTCCGAGTGAAAAAGATAATGGACCAAGTCCAACAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp TACCAGAAAGTAAGAGCTAAAAGAGCCTTTGTGACAGTTAAGAATCAGAAGCATAGCGAAGGGACATTTTaGAGCGTAGTTTCACTCCGG +
Preference number: 5 (lower is better)
Translates to: YQKVRAKRAFVTVKNQKHSEGTF*SVVSLR
Trigger: CCGGAGTGAAACTACGCTCAAAAATGTCCCTTCGCT...ATGCTTCTGATTCTTAACTGTCACAAAGGCTCTTTTAGCTCTTACTTTCTGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066133.7
CDS-3UTR CAA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAATTACAAATGTTCTTCTaGGGAATGACCCCATGGGGA +
Preference number: 5 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPELQMFF*GMTPWG
Trigger: TCCCCATGGGGTCATTCCCAAGAAGAACATTTGTAA...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTATGTGAGGTTCTGAAGTaGAGCATAATACCAGTCCTT +
Preference number: 5 (lower is better)
Translates to: TRNEREPAVTYIPISHCLCEVLK*SIIPVL
Trigger: AAGGACTGGTATTATGCTCAACTTCAGAACCTCACA...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTAACACCATTTCCACCTTaGTCCCCAGATGACTTGTCA +
Preference number: 5 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVTPFPP*SPDDLS
Trigger: TGACAAGTCATCTGGGGACAAAGGTGGAAATGGTGT...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp AGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACACACCATTTCCACCTTaGTCCCCAGATGACTTGTCA +
Preference number: 5 (lower is better)
Translates to: SIYLVDQELICLLRAVLYTPFPP*SPDDLS
Trigger: TGACAAGTCATCTGGGGACAAAGGTGGAAATGGTGT...GTACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTCATGAGTACCAAGCATaGACAACAAGGAATACACCA +
Preference number: 5 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSHEYQA*TTRNTP
Trigger: TGGTGTATTCCTTGTTGTCAATGCTTGGTACTCATG...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAAGTTCTGGCTTCTTGCTaGTCTTTGCTCGTTTTGCTT +
Preference number: 5 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPEVLASC*SLLVLL
Trigger: AAGCAAAACGAGCAAAGACAAGCAAGAAGCCAGAAC...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp CATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATGGGGAACCACATTACTTGTCCAAAATGTGGTaGGAATTTGAGGTGTTTGTC +
Preference number: 5 (lower is better)
Translates to: HAVKQSRLGKHIHGEPHYLSKMW*EFEVFV
Trigger: GACAAACACCTCAAATTCCAACCACATTTTGGACAA...GTAATGTGGTTCCCCATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGGCAAGTAGTGCCTTTTaGAGTCTGGCCATTTCTTTG +
Preference number: 5 (lower is better)
Translates to: STKNSIIHRTYSRKDASMASSAF*SLAISL
Trigger: CAAAGAAATGGCCAGACTCAAAAAGGCACTACTTGC...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTAGTCTGTATTGTTTCTaGGTTGATGGAGGGGACTTT +
Preference number: 5 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSSLYCF*VDGGDF
Trigger: AAAGTCCCCTCCATCAACCAAGAAACAATACAGACT...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp AGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACCAGGTGGAGGTAATTTaGAAGCAGTCTGGGCTAGTT +
Preference number: 5 (lower is better)
Translates to: SIYLVDQELICLLRAVLYQVEVI*KQSGLV
Trigger: AACTAGCCCAGACTGCTTCAAAATTACCTCCACCTG...GTACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp ACCGTCAGCTTCATTCATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATTTAGGTAGCTTTTCATaGAAGGCCTTGGCATTGGTT +
Preference number: 5 (lower is better)
Translates to: TVSFIHAVKQSRLGKHIHLGSFS*KALALV
Trigger: AACCAATGCCAAGGCCTTCAATGAAAAGCTACCTAA...ATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATGAATGAAGCTGACGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp TTGGAGGGAGACTTGGCTCCTGAAGAAAACTCAACAGCTTTATTATGCCTGGTTTTCCAAGTTCATTCATaGCATGCCTATGCTCTTCAT +
Preference number: 5 (lower is better)
Translates to: LEGDLAPEENSTALLCLVFQVHS*HAYALH
Trigger: ATGAAGAGCATAGGCATGCAATGAATGAACTTGGAA...AACCAGGCATAATAAAGCTGTTGAGTTTTCTTCAGGAGCCAAGTCTCCCTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165590.2
CDS-3UTR CAA 90 bp GTAAGAGCTAAAAGAGCCTTTGTGACAGTTAAGAATCAGAAGCATGTCTTTGTCGCTCTTGTCGAAGATTaGAGTTCTCCATCTTCAGTG +
Preference number: 5 (lower is better)
Translates to: VRAKRAFVTVKNQKHVFVALVED*SSPSSV
Trigger: CACTGAAGATGGAGAACTCAAATCTTCGACAAGAGC...GACAAAGACATGCTTCTGATTCTTAACTGTCACAAAGGCTCTTTTAGCTCTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066133.7
CDS-3UTR CAA 90 bp AGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACGCTCTTGTCGAAGATTaGAGTTCTCCATCTTCAGTG +
Preference number: 5 (lower is better)
Translates to: SIYLVDQELICLLRAVLYALVED*SSPSSV
Trigger: CACTGAAGATGGAGAACTCAAATCTTCGACAAGAGC...GTACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp CAGAAAGTAAGAGCTAAAAGAGCCTTTGTGACAGTTAAGAATCAGAAGCATGTCTTACAAATGTTCTTCTaGGGAATGACCCCATGGGGA +
Preference number: 5 (lower is better)
Translates to: QKVRAKRAFVTVKNQKHVLQMFF*GMTPWG
Trigger: TCCCCATGGGGTCATTCCCAAGAAGAACATTTGTAA...GACATGCTTCTGATTCTTAACTGTCACAAAGGCTCTTTTAGCTCTTACTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000066133.7
CDS-3UTR CAA 90 bp CTGAATTTCCCTTTCCATAGCCTCTTACTGCCCATCGAAACTAAGTATTTTAAGTTACAAATGTTCTTCTaGGGAATGACCCCATGGGGA +
Preference number: 5 (lower is better)
Translates to: LNFPFHSLLLPIETKYFKLQMFF*GMTPWG
Trigger: TCCCCATGGGGTCATTCCCAAGAAGAACATTTGTAA...CTTAAAATACTTAGTTTCGATGGGCAGTAAGAGGCTATGGAAAGGGAAATTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGACAGAGTCTTTGTCATaGCCATGTAAAAGCTGGATG +
Preference number: 5 (lower is better)
Translates to: STKNSIIHRTYSRKDASMTESLS*PCKSWM
Trigger: CATCCAGCTTTTACATGGCAATGACAAAGACTCTGT...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACCCCAAGTTCATTCATaGCATGCCTATGCTCTTCAT +
Preference number: 5 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVPQVHS*HAYALH
Trigger: ATGAAGAGCATAGGCATGCAATGAATGAACTTGGGG...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGTCTCTCAACGTCTTTTaGCTATTTACATCTGCTCGC +
Preference number: 5 (lower is better)
Translates to: STKNSIIHRTYSRKDASMSLNVF*LFTSAR
Trigger: GCGAGCAGATGTAAATAGCAAAAAGACGTTGAGAGA...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp CTGAATTTCCCTTTCCATAGCCTCTTACTGCCCATCGAAACTAAGTATTTTAAGTCTGCAGACCTCGTTTaGATGAGGTTCCTGCATTTT +
Preference number: 5 (lower is better)
Translates to: LNFPFHSLLLPIETKYFKSADLV*MRFLHF
Trigger: AAAATGCAGGAACCTCATCAAAACGAGGTCTGCAGA...CTTAAAATACTTAGTTTCGATGGGCAGTAAGAGGCTATGGAAAGGGAAATTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp ATGGGAATTTCGTCTCCAATAGGTGGAATGGACTCTTCTTTTACTTCTAACATTTCACATGCTTTGGTCTaGCCCACCTTTCATTCTGTG +
Preference number: 5 (lower is better)
Translates to: MGISSPIGGMDSSFTSNISHALV*PTFHSV
Trigger: CACAGAATGAAAGGTGGGCAAGACCAAAGCATGTGA...AATGTTAGAAGTAAAAGAAGAGTCCATTCCACCTATTGGAGACGAAATTCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTAGCTTCTTGCTTGTCTTaGCTCGTTTTGCTTTATTTC +
Preference number: 5 (lower is better)
Translates to: TRNEREPAVTYIPISHCLASCLS*LVLLYF
Trigger: GAAATAAAGCAAAACGAGCAAAGACAAGCAAGAAGC...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAATGTATTGTTTCTTGGTaGATGGAGGGGACTTTGCAA +
Preference number: 5 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPECIVSW*MEGTLQ
Trigger: TTGCAAAGTCCCCTCCATCAACCAAGAAACAATACA...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGAGTCTGTATTGTTTCTaGGTTGATGGAGGGGACTTT +
Preference number: 5 (lower is better)
Translates to: STKNSIIHRTYSRKDASMSLYCF*VDGGDF
Trigger: AAAGTCCCCTCCATCAACCAAGAAACAATACAGACT...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGACCTTGAAAAACATATaGGGGTGTCTTCTACGCAGT +
Preference number: 5 (lower is better)
Translates to: STKNSIIHRTYSRKDASMTLKNI*GCLLRS
Trigger: ACTGCGTAGAAGACACCCCAATATGTTTTTCAAGGT...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp ACCGTCAGCTTCATTCATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATAATCTGCTTCCTGTGTaGTCTGATCACATCCTATTT +
Preference number: 5 (lower is better)
Translates to: TVSFIHAVKQSRLGKHIHNLLPV*SDHILF
Trigger: AAATAGGATGTGATCAGACAACACAGGAAGCAGATT...ATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATGAATGAAGCTGACGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTACTTTATTATGCCTGGTaGATTCTGAAGATAAGCCAG +
Preference number: 5 (lower is better)
Translates to: TRNEREPAVTYIPISHCLLYYAW*ILKISQ
Trigger: CTGGCTTATCTTCAGAATCAACCAGGCATAATAAAG...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp ATGGGAATTTCGTCTCCAATAGGTGGAATGGACTCTTCTTTTACTTCTAACATTCTTTTGGAGGGAGACTaGGCTCCTGAAGAAAACTCA +
Preference number: 5 (lower is better)
Translates to: MGISSPIGGMDSSFTSNILLEGD*APEENS
Trigger: TGAGTTTTCTTCAGGAGCCAAGTCTCCCTCCAAAAG...AATGTTAGAAGTAAAAGAAGAGTCCATTCCACCTATTGGAGACGAAATTCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp AGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACGTCTGGGCTAGTTTTTaGGCTTTGCGTGATGACTTT +
Preference number: 5 (lower is better)
Translates to: SIYLVDQELICLLRAVLYVWASF*ALRDDF
Trigger: AAAGTCATCACGCAAAGCCAAAAAACTAGCCCAGAC...GTACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTATCTATATTCAGTATTTaGTGGCATGGGCTTTACTGG +
Preference number: 5 (lower is better)
Translates to: TRNEREPAVTYIPISHCLSIFSI*WHGLYW
Trigger: CCAGTAAAGCCCATGCCACAAAATACTGAATATAGA...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp CATGCAGTAAAGCAAAGCAGGCTGGGTAAACATATTCATGGGGAACCACATTACCATTGGTTTGTAAGCTaGGTTTCTTTGAGTCTTTGT +
Preference number: 5 (lower is better)
Translates to: HAVKQSRLGKHIHGEPHYHWFVS*VSLSLC
Trigger: ACAAAGACTCAAAGAAACCAAGCTTACAAACCAATG...GTAATGTGGTTCCCCATGAATATGTTTACCCAGCCTGCTTTGCTTTACTGCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTATGGACTGTGCTCTGTTaGCTGGATGTTTTATACTGG +
Preference number: 5 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVWTVLC*LDVLYW
Trigger: CCAGTATAAAACATCCAGCAAACAGAGCACAGTCCA...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp ACTAGGAATGAAAGAGAACCAGCTGTGACCTATATTCCCATCTCCCATTGCTTAGAATGGCTTTTCCTCTaGATCAGGTGTAAGATGAAA +
Preference number: 5 (lower is better)
Translates to: TRNEREPAVTYIPISHCLEWLFL*IRCKMK
Trigger: TTTCATCTTACACCTGATCAAGAGGAAAAGCCATTC...TAAGCAATGGGAGATGGGAATATAGGTCACAGCTGGTTCTCTTTCATTCCTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTATTTGGTAAGATTTTGTaGGCTCAGCTGTCTACCTGG +
Preference number: 5 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVFGKIL*AQLSTW
Trigger: CCAGGTAGACAGCTGAGCCAACAAAATCTTACCAAA...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTGTTCTACCTTTTTATTaGACCCATTGCCGTTACTCA +
Preference number: 5 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSVLPFY*THCRYS
Trigger: TGAGTAACGGCAATGGGTCAAATAAAAAGGTAGAAC...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAAGCACTCAAAACGCTTTaGAGGGTTGATTCCTTTTTA +
Preference number: 5 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPEALKTL*RVDSFL
Trigger: TAAAAAGGAATCAACCCTCAAAAGCGTTTTGAGTGC...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAAAAATGTGGTTGGAATTaGAGGTGTTTGTCATCGGTA +
Preference number: 5 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPEKCGWN*RCLSSV
Trigger: TACCGATGACAAACACCTCAAATTCCAACCACATTT...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp CTGAATTTCCCTTTCCATAGCCTCTTACTGCCCATCGAAACTAAGTATTTTAAGTGGGGAAACACATTCTaGTTGTCCAAAATGTGGTTG +
Preference number: 5 (lower is better)
Translates to: LNFPFHSLLLPIETKYFKWGNTF*LSKMWL
Trigger: CAACCACATTTTGGACAACAAGAATGTGTTTCCCCA...CTTAAAATACTTAGTTTCGATGGGCAGTAAGAGGCTATGGAAAGGGAAATTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTATGGGGAAACACATTCTaGTTGTCCAAAATGTGGTTG +
Preference number: 5 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVWGNTF*LSKMWL
Trigger: CAACCACATTTTGGACAACAAGAATGTGTTTCCCCA...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp CTGAATTTCCCTTTCCATAGCCTCTTACTGCCCATCGAAACTAAGTATTTTAAGTGTATTGTTTCTTGGTaGATGGAGGGGACTTTGCAA +
Preference number: 5 (lower is better)
Translates to: LNFPFHSLLLPIETKYFKCIVSW*MEGTLQ
Trigger: TTGCAAAGTCCCCTCCATCAACCAAGAAACAATACA...CTTAAAATACTTAGTTTCGATGGGCAGTAAGAGGCTATGGAAAGGGAAATTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTAACCTTGAAAAACATATaGGGGTGTCTTCTACGCAGT +
Preference number: 5 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVTLKNI*GCLLRS
Trigger: ACTGCGTAGAAGACACCCCAATATGTTTTTCAAGGT...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGTTGTGGCTTTTTCCTTaGGGCATAGCAGAATTGATA +
Preference number: 5 (lower is better)
Translates to: STKNSIIHRTYSRKDASMLWLFP*GIAELI
Trigger: TATCAATTCTGCTATGCCCAAAGGAAAAAGCCACAA...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp AGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACGGATGCTTGTTGGACTaGGTCCATTATCTTTTTCAC +
Preference number: 5 (lower is better)
Translates to: SIYLVDQELICLLRAVLYGCLLD*VHYLFH
Trigger: GTGAAAAAGATAATGGACCAAGTCCAACAAGCATCC...GTACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGTCTATATTCAGTATTTaGTGGCATGGGCTTTACTGG +
Preference number: 5 (lower is better)
Translates to: STKNSIIHRTYSRKDASMSIFSI*WHGLYW
Trigger: CCAGTAAAGCCCATGCCACAAAATACTGAATATAGA...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAAGTAAGCTTGGTTTCTTaGAGTCTTTGTTGTCTGAGA +
Preference number: 5 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPEVSLVS*SLCCLR
Trigger: TCTCAGACAACAAAGACTCAAAGAAACCAAGCTTAC...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACGCACTCTGTCTTCATaGTTAGGTAGCTTTTCATTG +
Preference number: 5 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVRTLSS*LGSFSL
Trigger: CAATGAAAAGCTACCTAACAATGAAGACAGAGTGCG...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp AGCACCAAGAACAGCATTATACACAGAACATACAGTCGGAAAGATGCATCAATGAAGGCCTTTTCTTTTTaGGCATGGCAGAACTTATAC +
Preference number: 5 (lower is better)
Translates to: STKNSIIHRTYSRKDASMKAFSF*AWQNLY
Trigger: GTATAAGTTCTGCCATGCCAAAAAAGAAAAGGCCTT...CATTGATGCATCTTTCCGACTGTATGTTCTGTGTATAATGCTGTTCTTGGTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp CAACTCTTATCAAACTGCGGGTGTGTGCCCAGAAATGATCTAACAAACACTTCTGATAAACTTGCTTGTTaGGTAAGATTTTGTTGGCTC +
Preference number: 5 (lower is better)
Translates to: QLLSNCGCVPRNDLTNTSDKLAC*VRFCWL
Trigger: GAGCCAACAAAATCTTACCAAACAAGCAAGTTTATC...AGAAGTGTTTGTTAGATCATTTCTGGGCACACACCCGCAGTTTGATAAGAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS GCA 90 bp ATTCCATCAATGCTTTCACACTTCCAACTTCTCTCAACGTCTTTTTaGTATTTACATCTGCTCGCCAAGACAAATTCCTCAAAACACTTG +
Preference number: 5 (lower is better)
Translates to: IPSMLSHFQLLSTSF*YLHLLAKTNSSKHL
Trigger: CAAGTGTTTTGAGGAATTTGTCTTGGCGAGCAGATGTAAATAGCAAAAAGACGTTGAGAGAAGTTGGAAGTGTGAAAGCATTGATGGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
ENSMUST00000171187.8
CDS-3UTR CAA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTATTTTCCTTCTCTTCTTaGTCAAGATCAGCAAGGAGT +
Preference number: 5 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVFSFSS*SRSARS
Trigger: ACTCCTTGCTGATCTTGACAAAGAAGAGAAGGAAAA...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp CTGAATTTCCCTTTCCATAGCCTCTTACTGCCCATCGAAACTAAGTATTTTAAGTTTTCCTTCTCTTCTTaGTCAAGATCAGCAAGGAGT +
Preference number: 5 (lower is better)
Translates to: LNFPFHSLLLPIETKYFKFSFSS*SRSARS
Trigger: ACTCCTTGCTGATCTTGACAAAGAAGAGAAGGAAAA...CTTAAAATACTTAGTTTCGATGGGCAGTAAGAGGCTATGGAAAGGGAAATTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GTATACCAGAAAGTAAGAGCTAAAAGAGCCTTTGTGACAGTTAAGAATCAGAAGTGTGAGGTTCTGAAGTaGAGCATAATACCAGTCCTT +
Preference number: 5 (lower is better)
Translates to: VYQKVRAKRAFVTVKNQKCEVLK*SIIPVL
Trigger: AAGGACTGGTATTATGCTCAACTTCAGAACCTCACA...CTTCTGATTCTTAACTGTCACAAAGGCTCTTTTAGCTCTTACTTTCTGGTATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066133.7
CDS-3UTR CAA 90 bp CAGAAAGTAAGAGCTAAAAGAGCCTTTGTGACAGTTAAGAATCAGAAGCATGTCTATGTCCTTTTCTATTaGCTGGATCCTGGCTATTCT +
Preference number: 5 (lower is better)
Translates to: QKVRAKRAFVTVKNQKHVYVLFY*LDPGYS
Trigger: AGAATAGCCAGGATCCAGCAAATAGAAAAGGACATA...GACATGCTTCTGATTCTTAACTGTCACAAAGGCTCTTTTAGCTCTTACTTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066133.7
CDS-3UTR CAA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTATATGTCCTTTTCTATTaGCTGGATCCTGGCTATTCT +
Preference number: 5 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVYVLFY*LDPGYS
Trigger: AGAATAGCCAGGATCCAGCAAATAGAAAAGGACATA...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp ATGGGAATTTCGTCTCCAATAGGTGGAATGGACTCTTCTTTTACTTCTAACATTCATGAGTACCAAGCATaGACAACAAGGAATACACCA +
Preference number: 5 (lower is better)
Translates to: MGISSPIGGMDSSFTSNIHEYQA*TTRNTP
Trigger: TGGTGTATTCCTTGTTGTCAATGCTTGGTACTCATG...AATGTTAGAAGTAAAAGAAGAGTCCATTCCACCTATTGGAGACGAAATTCCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAAAACAATACAGAGTCTTaGTCATTGCCATGTAAAAGC +
Preference number: 5 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPENNTES*SLPCKS
Trigger: GCTTTTACATGGCAATGACAAAGACTCTGTATTGTT...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAAGTCATGTTTCCAGTATaGAAATTGTCTGACCTACTA +
Preference number: 5 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPEVMFPV*KLSDLL
Trigger: TAGTAGGTCAGACAATTTCAATACTGGAAACATGAC...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp AGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACGCTTCTTGCTTGTCTTaGCTCGTTTTGCTTTATTTC +
Preference number: 5 (lower is better)
Translates to: SIYLVDQELICLLRAVLYASCLS*LVLLYF
Trigger: GAAATAAAGCAAAACGAGCAAAGACAAGCAAGAAGC...GTACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTAAAATGTGGTTGGAATTaGAGGTGTTTGTCATCGGTA +
Preference number: 5 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVKCGWN*RCLSSV
Trigger: TACCGATGACAAACACCTCAAATTCCAACCACATTT...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTAGGAAACACATTCTTGTaGTCCAAAATGTGGTTGGAA +
Preference number: 5 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVGNTFL*SKMWLE
Trigger: TTCCAACCACATTTTGGACAACAAGAATGTGTTTCC...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp CCTCCCAAAATGACCAGTGAGGACAAAGTGTACTATCAAATATGGTTTCCAGAATTCTTCTTCTTCATGTaGTTCTTCCTCAGAATAACG +
Preference number: 5 (lower is better)
Translates to: PPKMTSEDKVYYQIWFPEFFFFM*FFLRIT
Trigger: CGTTATTCTGAGGAAGAACAACATGAAGAAGAAGAA...TTCTGGAAACCATATTTGATAGTACACTTTGTCCTCACTGGTCATTTTGGGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp ATGGGAATTTCGTCTCCAATAGGTGGAATGGACTCTTCTTTTACTTCTAACATTGGATGCTTGTTGGACTaGGTCCATTATCTTTTTCAC +
Preference number: 5 (lower is better)
Translates to: MGISSPIGGMDSSFTSNIGCLLD*VHYLFH
Trigger: GTGAAAAAGATAATGGACCAAGTCCAACAAGCATCC...AATGTTAGAAGTAAAAGAAGAGTCCATTCCACCTATTGGAGACGAAATTCCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp CTGAATTTCCCTTTCCATAGCCTCTTACTGCCCATCGAAACTAAGTATTTTAAGGTAAGCTTGGTTTCTTaGAGTCTTTGTTGTCTGAGA +
Preference number: 5 (lower is better)
Translates to: LNFPFHSLLLPIETKYFKVSLVS*SLCCLR
Trigger: TCTCAGACAACAAAGACTCAAAGAAACCAAGCTTAC...CTTAAAATACTTAGTTTCGATGGGCAGTAAGAGGCTATGGAAAGGGAAATTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp AGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACAAGGCCTTTTCTTTTTaGGCATGGCAGAACTTATAC +
Preference number: 5 (lower is better)
Translates to: SIYLVDQELICLLRAVLYKAFSF*AWQNLY
Trigger: GTATAAGTTCTGCCATGCCAAAAAAGAAAAGGCCTT...GTACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTAGAATGGCTTTTCCTCTaGATCAGGTGTAAGATGAAA +
Preference number: 5 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVEWLFL*IRCKMK
Trigger: TTTCATCTTACACCTGATCAAGAGGAAAAGCCATTC...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTAGTTCTACCTTTTTATTaGACCCATTGCCGTTACTCA +
Preference number: 5 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVVLPFY*THCRYS
Trigger: TGAGTAACGGCAATGGGTCAAATAAAAAGGTAGAAC...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp AGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTACGAAATGTCACTTTCCTaGATTTTCCTCCATGTTCCT +
Preference number: 5 (lower is better)
Translates to: SIYLVDQELICLLRAVLYEMSLS*IFLHVP
Trigger: AGGAACATGGAGGAAAATCAAGGAAAGTGACATTTC...GTACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp CTGAATTTCCCTTTCCATAGCCTCTTACTGCCCATCGAAACTAAGTATTTTAAGAAAGTTTGTAGGCAATaGTTCTCTCTTAGGATTTGC +
Preference number: 5 (lower is better)
Translates to: LNFPFHSLLLPIETKYFKKVCRQ*FSLRIC
Trigger: GCAAATCCTAAGAGAGAACAATTGCCTACAAACTTT...CTTAAAATACTTAGTTTCGATGGGCAGTAAGAGGCTATGGAAAGGGAAATTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTATATCATCCATATGATTaGCACTGTGTATCTTATGGG +
Preference number: 5 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVYHPYD*HCVSYG
Trigger: CCCATAAGATACACAGTGCAAATCATATGGATGATA...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp CTGAATTTCCCTTTCCATAGCCTCTTACTGCCCATCGAAACTAAGTATTTTAAGTATCATCCATATGATTaGCACTGTGTATCTTATGGG +
Preference number: 5 (lower is better)
Translates to: LNFPFHSLLLPIETKYFKYHPYD*HCVSYG
Trigger: CCCATAAGATACACAGTGCAAATCATATGGATGATA...CTTAAAATACTTAGTTTCGATGGGCAGTAAGAGGCTATGGAAAGGGAAATTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp GAGCATTTACTTGGTAGATCAGGAACTCATTTGCTTATTAAGAGCTGTGCTGTATTGGGCATAGCAGAATaGATACATTCTGCAAGAATA +
Preference number: 5 (lower is better)
Translates to: EHLLGRSGTHLLIKSCAVLGIAE*IHSARI
Trigger: TATTCTTGCAGAATGTATCAATTCTGCTATGCCCAA...TACAGCACAGCTCTTAATAAGCAAATGAGTTCCTGATCTACCAAGTAAATGCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp AAAGTAAGAGCTAAAAGAGCCTTTGTGACAGTTAAGAATCAGAAGCATGTCTTTTTTTCCTTCTCTTCTTaGTCAAGATCAGCAAGGAGT +
Preference number: 5 (lower is better)
Translates to: KVRAKRAFVTVKNQKHVFFSFSS*SRSARS
Trigger: ACTCCTTGCTGATCTTGACAAAGAAGAGAAGGAAAA...AAAGACATGCTTCTGATTCTTAACTGTCACAAAGGCTCTTTTAGCTCTTACTTT
37% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENSMUST00000066133.7
CDS-3UTR CAA 90 bp ATGGGAATTTCGTCTCCAATAGGTGGAATGGACTCTTCTTTTACTTCTAACATTAACAATACAGAGTCTTaGTCATTGCCATGTAAAAGC +
Preference number: 5 (lower is better)
Translates to: MGISSPIGGMDSSFTSNINNTES*SLPCKS
Trigger: GCTTTTACATGGCAATGACAAAGACTCTGTATTGTT...AATGTTAGAAGTAAAAGAAGAGTCCATTCCACCTATTGGAGACGAAATTCCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS-3UTR CAA 90 bp ATGGGAATTTCGTCTCCAATAGGTGGAATGGACTCTTCTTTTACTTCTAACATTGATAAACTTGCTTGTTaGGTAAGATTTTGTTGGCTC +
Preference number: 5 (lower is better)
Translates to: MGISSPIGGMDSSFTSNIDKLAC*VRFCWL
Trigger: GAGCCAACAAAATCTTACCAAACAAGCAAGTTTATC...AATGTTAGAAGTAAAAGAAGAGTCCATTCCACCTATTGGAGACGAAATTCCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS TCA 72 bp CGGCCAGCTTCATGGGAGGCAGCATCATGCCTGCTCTaGGATGACCTCTCCGCTTCCGCCGCCTGGGACTGT +
Preference number: 6 (lower is better)
Translates to: RPASWEAASCLL*DDLSASAAWDC
Trigger: ACAGTCCCAGGCGGCGGAAGCGGAGAGGTCATCTCAGAGCAGGCATGATGCTGCCTCCCATGAAGCTGGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066133.7
ENSMUST00000079362.13
CDS TCA 72 bp GGTGCTCACTGGCGTAGGGATCTGAGACGGCCGGGCTaGAGTGCTGTCTGCGCTGCTCTTCCTAGGGCTAGG +
Preference number: 6 (lower is better)
Translates to: GAHWRRDLRRPG*SAVCAALPRAR
Trigger: CCTAGCCCTAGGAAGAGCAGCGCAGACAGCACTTCAGCCCGGCCGTCTCAGATCCCTACGCCAGTGAGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS GCA 72 bp GCTGCGGTGTTGCTTTCTGCCACTCCGTGGCCTTCGTaGTGCCGGCCAGCTTCATGGGAGGCAGCATCATGC +
Preference number: 6 (lower is better)
Translates to: AAVLLSATPWPS*CRPASWEAASC
Trigger: GCATGATGCTGCCTCCCATGAAGCTGGCCGGCAGCACGAAGGCCACGGAGTGGCAGAAAGCAACACCGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066133.7
ENSMUST00000079362.13
ENSMUST00000171187.8
CDS GCA 72 bp TCTCTGACCACTACTGGAGGCTGCGGTGTTGCTTTCTaGCACTCCGTGGCCTTCGTGCTGCCGGCCAGCTTC +
Preference number: 6 (lower is better)
Translates to: SLTTTGGCGVAF*HSVAFVLPASF
Trigger: GAAGCTGGCCGGCAGCACGAAGGCCACGGAGTGGCAGAAAGCAACACCGCAGCCTCCAGTAGTGGTCAGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066133.7
CDS CCA 72 bp ACACGTGTAGCTGGACTTCGCTCCGCTTCCGCCGCCTaGGACTGTAAAAGCTGGCGCACGCGCAGTATGTCC +
Preference number: 6 (lower is better)
Translates to: TRVAGLRSASAA*DCKSWRTRSMS
Trigger: GGACATACTGCGCGTGCGCCAGCTTTTACAGTCCCAGGCGGCGGAAGCGGAGCGAAGTCCAGCTACACGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115781.10
CDS TCA 72 bp CTCTTCTTCGTGTTGGTGCTCACTGGCGTAGGGATCTaGGACGGCCGGGCTGAAGTGCTGTCTGCGCTGCTC +
Preference number: 6 (lower is better)
Translates to: LFFVLVLTGVGI*DGRAEVLSALL
Trigger: GAGCAGCGCAGACAGCACTTCAGCCCGGCCGTCTCAGATCCCTACGCCAGTGAGCACCAACACGAAGAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS GCA 72 bp CACACGTGTAGCTGGACTCTGACCACTACTGGAGGCTaGGGTGTTGCTTTCTGCCACTCCGTGGCCTTCGTG +
Preference number: 6 (lower is better)
Translates to: HTCSWTLTTTGG*GVAFCHSVAFV
Trigger: CACGAAGGCCACGGAGTGGCAGAAAGCAACACCGCAGCCTCCAGTAGTGGTCAGAGTCCAGCTACACGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000171187.8
CDS CCA 72 bp CTGGCTATTCTTCGCTGTGCACGCTTCTCCATGTCCTaGCAGGTGCCAAGCTGCTCCTCCATTGCAGCCCTG +
Preference number: 6 (lower is better)
Translates to: LAILRCARFSMS*QVPSCSSIAAL
Trigger: CAGGGCTGCAATGGAGGAGCAGCTTGGCACCTGCCAGGACATGGAGAAGCGTGCACAGCGAAGAATAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066133.7
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS TCA 72 bp TCGACGTGGAAGGACTTGGGAGCATACCCGGATGCCTaGGGCTTACTGGGCTCTCCTTGTGAGTTGGCAGGT +
Preference number: 6 (lower is better)
Translates to: STWKDLGAYPDA*GLLGSPCELAG
Trigger: ACCTGCCAACTCACAAGGAGAGCCCAGTAAGCCTCAGGCATCCGGGTATGCTCCCAAGTCCTTCCACGTCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS GCA 72 bp CTCCATGTCCTGGCAGGTGCCAAGCTGCTCCTCCATTaGAGCCCTGATCTGCCTTGCTTCATACTCCAGCTG +
Preference number: 6 (lower is better)
Translates to: LHVLAGAKLLLH*SPDLPCFILQL
Trigger: CAGCTGGAGTATGAAGCAAGGCAGATCAGGGCTGCAATGGAGGAGCAGCTTGGCACCTGCCAGGACATGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066133.7
ENSMUST00000079362.13
ENSMUST00000115781.10
ENSMUST00000171187.8
CDS GCA 72 bp ACCTGCACCCTCTGCACGGCAGCATTTACAGCAGTCTaGTTAGGCCCACTCTCTCTCTTCTCAGCAGCAGGG +
Preference number: 6 (lower is better)
Translates to: TCTLCTAAFTAV*LGPLSLFSAAG
Trigger: CCCTGCTGCTGAGAAGAGAGAGAGTGGGCCTAAGCAGACTGCTGTAAATGCTGCCGTGCAGAGGGTGCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS GCA 72 bp GTCACTCTGGCAGCAACAGTCCCGCTAGGTGAGCTGTaGTTGCTGGAGCTACTGGAACTGAAAGGGGTACGC +
Preference number: 6 (lower is better)
Translates to: VTLAATVPLGEL*LLELLELKGVR
Trigger: GCGTACCCCTTTCAGTTCCAGTAGCTCCAGCAAGCACAGCTCACCTAGCGGGACTGTTGCTGCCAGAGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CCA 72 bp GACCTCTCCGCTTCCGCCGCCTGGGACTGTAAAAGCTaGCGCACGCGCAGTATGTCCTTTTCTATTTGCTGG +
Preference number: 6 (lower is better)
Translates to: DLSASAAWDCKS*RTRSMSFSICW
Trigger: CCAGCAAATAGAAAAGGACATACTGCGCGTGCGCCAGCTTTTACAGTCCCAGGCGGCGGAAGCGGAGAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066133.7
ENSMUST00000079362.13
CDS CCA 72 bp CTTCGCTCCGCTTCCGCCGCCTGGGACTGTAAAAGCTaGCGCACGCGCAGTATGTCCTTTTCTATTTGCTGG +
Preference number: 6 (lower is better)
Translates to: LRSASAAWDCKS*RTRSMSFSICW
Trigger: CCAGCAAATAGAAAAGGACATACTGCGCGTGCGCCAGCTTTTACAGTCCCAGGCGGCGGAAGCGGAGCGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115781.10
CDS GCA 72 bp CACGTTCAGAAAGTGTCTCTGACCACTACTGGAGGCTaGGGTGTTGCTTTCTGCCACTCCGTGGCCTTCGTG +
Preference number: 6 (lower is better)
Translates to: HVQKVSLTTTGG*GVAFCHSVAFV
Trigger: CACGAAGGCCACGGAGTGGCAGAAAGCAACACCGCAGCCTCCAGTAGTGGTCAGAGACACTTTCTGAACGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066133.7
CDS GCA 72 bp CAACAGGAGCTGGCATTGGGTTTTTGTCCTGGTCCATaGCTTGTTCGTGGGCTTCCTGCCACTCCCAACAGG +
Preference number: 6 (lower is better)
Translates to: QQELALGFCPGP*LVRGLPATPNR
Trigger: CCTGTTGGGAGTGGCAGGAAGCCCACGAACAAGGCATGGACCAGGACAAAAACCCAATGCCAGCTCCTGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
ENSMUST00000171187.8
CDS CCA 72 bp AGAAACAGACAGGGGTGTCTTCGACGTGGAAGGACTTaGGAGCATACCCGGATGCCTGAGGCTTACTGGGCT +
Preference number: 6 (lower is better)
Translates to: RNRQGCLRRGRT*EHTRMPEAYWA
Trigger: AGCCCAGTAAGCCTCAGGCATCCGGGTATGCTCCCAAGTCCTTCCACGTCGAAGACACCCCTGTCTGTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CAA 72 bp CTCCAAGTACTCACTCGAGGAAGGGACGAGGAATGTTaGCTGTGTTCACGCTTCCAGGTTCCCGCCCGGTTG +
Preference number: 6 (lower is better)
Translates to: LQVLTRGRDEEC*LCSRFQVPARL
Trigger: CAACCGGGCGGGAACCTGGAAGCGTGAACACAGCAAACATTCCTCGTCCCTTCCTCGAGTGAGTACTTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CAA 72 bp ACTCTGGCAGCAACAGTCCCGCTAGGTGAGCTGTGCTaGCTGGAGCTACTGGAACTGAAAGGGGTACGCTCT +
Preference number: 6 (lower is better)
Translates to: TLAATVPLGELC*LELLELKGVRS
Trigger: AGAGCGTACCCCTTTCAGTTCCAGTAGCTCCAGCAAGCACAGCTCACCTAGCGGGACTGTTGCTGCCAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS TCA 72 bp GATTCAGCACCACTGGCAGCACCTGAGGAAGCGCTCTaGGAAGCCATGCCTGTGGGAGAAATGTCACTTTCC +
Preference number: 6 (lower is better)
Translates to: DSAPLAAPEEAL*EAMPVGEMSLS
Trigger: GGAAAGTGACATTTCTCCCACAGGCATGGCTTCTCAGAGCGCTTCCTCAGGTGCTGCCAGTGGTGCTGAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS TCA 72 bp TGCGTGCCGCTAGAACTCAAAACACTGGCTGTTTCGTaGTCCACACGTGTAGCTGGACTTCGCTCCGCTTCC +
Preference number: 6 (lower is better)
Translates to: CVPLELKTLAVS*STRVAGLRSAS
Trigger: GGAAGCGGAGCGAAGTCCAGCTACACGTGTGGATCACGAAACAGCCAGTGTTTTGAGTTCTAGCGGCACGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115781.10
CDS GCA 72 bp CCGTCTTTGGAGGACTGGGGGAAAGTGGGCTGTTTCTaGAGCACTGGTTTGGACTGTGCTCTGTTTGCTGGA +
Preference number: 6 (lower is better)
Translates to: PSLEDWGKVGCF*STGLDCALFAG
Trigger: TCCAGCAAACAGAGCACAGTCCAAACCAGTGCTGCAGAAACAGCCCACTTTCCCCCAGTCCTCCAAAGACGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CCA 72 bp CAGCAGCAGGGACTTTACTTTTTGGCACCTCTCTCTTaGCCTGCACTGTCTGTGGAGGAGGTGGAGGGGTTT +
Preference number: 6 (lower is better)
Translates to: QQQGLYFLAPLS*PALSVEEVEGF
Trigger: AAACCCCTCCACCTCCTCCACAGACAGTGCAGGCCAAGAGAGAGGTGCCAAAAAGTAAAGTCCCTGCTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CCA 72 bp TTTCGTCAGTTGCTGCCCCTCTATCTGGTCCGTCTTTaGAGGACTGGGGGAAAGTGGGCTGTTTCTGCAGCA +
Preference number: 6 (lower is better)
Translates to: FRQLLPLYLVRL*RTGGKWAVSAA
Trigger: TGCTGCAGAAACAGCCCACTTTCCCCCAGTCCTCCAAAGACGGACCAGATAGAGGGGCAGCAACTGACGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CCA 72 bp AGGACTTGGGAGCATACCCGGATGCCTGAGGCTTACTaGGCTCTCCTTGTGAGTTGGCAGGTTCAGCTTCTT +
Preference number: 6 (lower is better)
Translates to: RTWEHTRMPEAY*ALLVSWQVQLL
Trigger: AAGAAGCTGAACCTGCCAACTCACAAGGAGAGCCCAGTAAGCCTCAGGCATCCGGGTATGCTCCCAAGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CAA 72 bp AGGAGCTGGCATTGGGTTTTTGTCCTGGTCCATGCCTaGTTCGTGGGCTTCCTGCCACTCCCAACAGGTTTC +
Preference number: 6 (lower is better)
Translates to: RSWHWVFVLVHA*FVGFLPLPTGF
Trigger: GAAACCTGTTGGGAGTGGCAGGAAGCCCACGAACAAGGCATGGACCAGGACAAAAACCCAATGCCAGCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
ENSMUST00000171187.8
CDS CAA 72 bp TCAGCAGCAGGGACTTTACTTTTTGGCACCTCTCTCTaGGCCTGCACTGTCTGTGGAGGAGGTGGAGGGGTT +
Preference number: 6 (lower is better)
Translates to: SAAGTLLFGTSL*ACTVCGGGGGV
Trigger: AACCCCTCCACCTCCTCCACAGACAGTGCAGGCCAAGAGAGAGGTGCCAAAAAGTAAAGTCCCTGCTGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CAA 90 bp AAAGGTGTCACTCTGGCAGCAACAGTCCCGCTAGGTGAGCTGTGCTaGCTGGAGCTACTGGAACTGAAAGGGGTACGCTCTGCTATACAC +
Preference number: 6 (lower is better)
Translates to: KGVTLAATVPLGELC*LELLELKGVRSAIH
Trigger: GTGTATAGCAGAGCGTACCCCTTTCAGTTCCAGTAGCTCCAGCAAGCACAGCTCACCTAGCGGGACTGTTGCTGCCAGAGTGACACCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS TCA 72 bp GTTTGCTGTGTTCACGCTTCCAGGTTCCCGCCCGGTTaGTTGGTAGTCTGGAAGGACTTTCAGAATGGGAGC +
Preference number: 6 (lower is better)
Translates to: VCCVHASRFPPG*LVVWKDFQNGS
Trigger: GCTCCCATTCTGAAAGTCCTTCCAGACTACCAATCAACCGGGCGGGAACCTGGAAGCGTGAACACAGCAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS TCA 72 bp AAAAGGTGTCACTCTGGCAGCAACAGTCCCGCTAGGTaGGCTGTGCTTGCTGGAGCTACTGGAACTGAAAGG +
Preference number: 6 (lower is better)
Translates to: KRCHSGSNSPAR*AVLAGATGTER
Trigger: CCTTTCAGTTCCAGTAGCTCCAGCAAGCACAGCTCACCTAGCGGGACTGTTGCTGCCAGAGTGACACCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS GCA 72 bp AACAAAGTATCCACGTCTGGAAGGACCTGCACCCTCTaGACGGCAGCATTTACAGCAGTCTGCTTAGGCCCA +
Preference number: 6 (lower is better)
Translates to: NKVSTSGRTCTL*TAAFTAVCLGP
Trigger: TGGGCCTAAGCAGACTGCTGTAAATGCTGCCGTGCAGAGGGTGCAGGTCCTTCCAGACGTGGATACTTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS GCA 72 bp GCGAAGTGTAACAAAGTATCCACGTCTGGAAGGACCTaGACCCTCTGCACGGCAGCATTTACAGCAGTCTGC +
Preference number: 6 (lower is better)
Translates to: AKCNKVSTSGRT*TLCTAAFTAVC
Trigger: GCAGACTGCTGTAAATGCTGCCGTGCAGAGGGTGCAGGTCCTTCCAGACGTGGATACTTTGTTACACTTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS GCA 72 bp TCAGGAAGGGAAGGGCTTAAAACTGGGGTCTGTGCCTaGGACCTGGTGGGAGAATCTGGTCTAGAAGATGGA +
Preference number: 6 (lower is better)
Translates to: SGREGLKTGVCA*DLVGESGLEDG
Trigger: TCCATCTTCTAGACCAGATTCTCCCACCAGGTCGCAGGCACAGACCCCAGTTTTAAGCCCTTCCCTTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS GCA 72 bp GGGTTTCCAGACCCACGGTTTGCACAGGACTGCCACTaGCCACACTCTGTTTCCCATGGGTGTCTTTTGAAT +
Preference number: 6 (lower is better)
Translates to: GFPDPRFAQDCH*PHSVSHGCLLN
Trigger: ATTCAAAAGACACCCATGGGAAACAGAGTGTGGGCAGTGGCAGTCCTGTGCAAACCGTGGGTCTGGAAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CCA 72 bp AGCTGGCGCACGCGCAGTATGTCCTTTTCTATTTGCTaGATCCTGGCTATTCTTCGCTGTGCACGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: SWRTRSMSFSIC*ILAILRCARFS
Trigger: GGAGAAGCGTGCACAGCGAAGAATAGCCAGGATCCAGCAAATAGAAAAGGACATACTGCGCGTGCGCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066133.7
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CCA 72 bp GCTTGTCTAGATAAGCACGCGGCGGCTGCAGCAGCTTaGTGCAAACTACTTACTATGGAGTTTGCGCCTTCC +
Preference number: 6 (lower is better)
Translates to: ACLDKHAAAAAA*CKLLTMEFAPS
Trigger: GGAAGGCGCAAACTCCATAGTAAGTAGTTTGCACCAAGCTGCTGCAGCCGCCGCGTGCTTATCTAGACAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CAA 72 bp CGTCACGAGGTAAGACCCGGAATGGCGTTTAGGACTTaGGGCTCCACTGGATTCTGTGCTGTCAGTCTTCGA +
Preference number: 6 (lower is better)
Translates to: RHEVRPGMAFRT*GSTGFCAVSLR
Trigger: TCGAAGACTGACAGCACAGAATCCAGTGGAGCCCAAAGTCCTAAACGCCATTCCGGGTCTTACCTCGTGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CAA 90 bp ATGCTCAACAGGAGCTGGCATTGGGTTTTTGTCCTGGTCCATGCCTaGTTCGTGGGCTTCCTGCCACTCCCAACAGGTTTCACAGTAAGC +
Preference number: 6 (lower is better)
Translates to: MLNRSWHWVFVLVHA*FVGFLPLPTGFTVS
Trigger: GCTTACTGTGAAACCTGTTGGGAGTGGCAGGAAGCCCACGAACAAGGCATGGACCAGGACAAAAACCCAATGCCAGCTCCTGTTGAGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
ENSMUST00000171187.8
CDS CAA 90 bp CTAGCTGCCTGCTGGCTTGAGTTTGGTTCTGGGCGGCAGGTAACTTaGGCTTCGGAATCCTTGCTTTCTTTGCCCTTTCTTAACTCGGCC +
Preference number: 6 (lower is better)
Translates to: LAACWLEFGSGRQVT*ASESLLSLPFLNSA
Trigger: GGCCGAGTTAAGAAAGGGCAAAGAAAGCAAGGATTCCGAAGCCAAAGTTACCTGCCGCCCAGAACCAAACTCAAGCCAGCAGGCAGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CAA 90 bp CCAGTTCTTCTCCAAGTACTCACTCGAGGAAGGGACGAGGAATGTTaGCTGTGTTCACGCTTCCAGGTTCCCGCCCGGTTGATTGGTAGT +
Preference number: 6 (lower is better)
Translates to: PVLLQVLTRGRDEEC*LCSRFQVPARLIGS
Trigger: ACTACCAATCAACCGGGCGGGAACCTGGAAGCGTGAACACAGCAAACATTCCTCGTCCCTTCCTCGAGTGAGTACTTGGAGAAGAACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS GCA 72 bp CTTTTCTATTTGCTGGATCCTGGCTATTCTTCGCTGTaGACGCTTCTCCATGTCCTGGCAGGTGCCAAGCTG +
Preference number: 6 (lower is better)
Translates to: LFYLLDPGYSSL*TLLHVLAGAKL
Trigger: CAGCTTGGCACCTGCCAGGACATGGAGAAGCGTGCACAGCGAAGAATAGCCAGGATCCAGCAAATAGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066133.7
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS GCA 72 bp AGCTATTCCGAAGCCCTGGGATGTGAATCATCGTCCTaGCTCTTGAGATTGAAGGCATGTTTGTCGGGAGGG +
Preference number: 6 (lower is better)
Translates to: SYSEALGCESSS*LLRLKACLSGG
Trigger: CCCTCCCGACAAACATGCCTTCAATCTCAAGAGGCAGGACGATGATTCACATCCCAGGGCTTCGGAATAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS GCA 72 bp TTTGGTGGGCACCTGGTTTTCCTTCATCTGTCTGGGTaGTGGCATGGAGCTCACATGCCTTTCATCCTCACT +
Preference number: 6 (lower is better)
Translates to: FGGHLVFLHLSG*WHGAHMPFILT
Trigger: AGTGAGGATGAAAGGCATGTGAGCTCCATGCCAGCACCCAGACAGATGAAGGAAAACCAGGTGCCCACCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CCA 72 bp GGTGGGCACCTGGTTTTCCTTCATCTGTCTGGGTGCTaGCATGGAGCTCACATGCCTTTCATCCTCACTTTT +
Preference number: 6 (lower is better)
Translates to: GGHLVFLHLSGC*HGAHMPFILTF
Trigger: AAAAGTGAGGATGAAAGGCATGTGAGCTCCATGCCAGCACCCAGACAGATGAAGGAAAACCAGGTGCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CAA 72 bp TCCGAAGCCCTGGGATGTGAATCATCGTCCTGCCTCTaGAGATTGAAGGCATGTTTGTCGGGAGGGGTTGTT +
Preference number: 6 (lower is better)
Translates to: SEALGCESSSCL*RLKACLSGGVV
Trigger: AACAACCCCTCCCGACAAACATGCCTTCAATCTCAAGAGGCAGGACGATGATTCACATCCCAGGGCTTCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CAA 72 bp TGTTTGCTGTGTTCACGCTTCCAGGTTCCCGCCCGGTaGATTGGTAGTCTGGAAGGACTTTCAGAATGGGAG +
Preference number: 6 (lower is better)
Translates to: CLLCSRFQVPAR*IGSLEGLSEWE
Trigger: CTCCCATTCTGAAAGTCCTTCCAGACTACCAATCAACCGGGCGGGAACCTGGAAGCGTGAACACAGCAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CAA 90 bp GACGAGGAATGTTTGCTGTGTTCACGCTTCCAGGTTCCCGCCCGGTaGATTGGTAGTCTGGAAGGACTTTCAGAATGGGAGCGTGCAATA +
Preference number: 6 (lower is better)
Translates to: DEECLLCSRFQVPAR*IGSLEGLSEWERAI
Trigger: TATTGCACGCTCCCATTCTGAAAGTCCTTCCAGACTACCAATCAACCGGGCGGGAACCTGGAAGCGTGAACACAGCAAACATTCCTCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CAA 90 bp GGTTCTGGGCGGCAGGTAACTTTGGCTTCGGAATCCTTGCTTTCTTaGCCCTTTCTTAACTCGGCCTTTTCCCTGGAAAGGTCAACATCG +
Preference number: 6 (lower is better)
Translates to: GSGRQVTLASESLLS*PFLNSAFSLERSTS
Trigger: CGATGTTGACCTTTCCAGGGAAAAGGCCGAGTTAAGAAAGGGCAAAGAAAGCAAGGATTCCGAAGCCAAAGTTACCTGCCGCCCAGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CAA 90 bp AGGAGCTATTCCGAAGCCCTGGGATGTGAATCATCGTCCTGCCTCTaGAGATTGAAGGCATGTTTGTCGGGAGGGGTTGTTTCATTTGGC +
Preference number: 6 (lower is better)
Translates to: RSYSEALGCESSSCL*RLKACLSGGVVSFG
Trigger: GCCAAATGAAACAACCCCTCCCGACAAACATGCCTTCAATCTCAAGAGGCAGGACGATGATTCACATCCCAGGGCTTCGGAATAGCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CAA 90 bp GCAGATTCCTCCAGTTTCCTCCTCAGGGTTGGGCTTGGGGCTTCTTaGATGAAAGTAGACTGGCGTACTAATGCAGGCCTTTCTGATCTG +
Preference number: 6 (lower is better)
Translates to: ADSSSFLLRVGLGAS*MKVDWRTNAGLSDL
Trigger: CAGATCAGAAAGGCCTGCATTAGTACGCCAGTCTACTTTCATCAAAGAAGCCCCAAGCCCAACCCTGAGGAGGAAACTGGAGGAATCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS GCA 72 bp AAAAGCTGGCGCACGCGCAGTATGTCCTTTTCTATTTaGTGGATCCTGGCTATTCTTCGCTGTGCACGCTTC +
Preference number: 6 (lower is better)
Translates to: KSWRTRSMSFSI*WILAILRCARF
Trigger: GAAGCGTGCACAGCGAAGAATAGCCAGGATCCAGCAAATAGAAAAGGACATACTGCGCGTGCGCCAGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000066133.7
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS GCA 72 bp GAAGTCATAGTCTCATCTTCAATACTTCCCTGTAGCTaGTTAAGTACTTCCTGCCAGACGCTCGCTCCGCGG +
Preference number: 6 (lower is better)
Translates to: EVIVSSSILPCS*LSTSCQTLAPR
Trigger: CCGCGGAGCGAGCGTCTGGCAGGAAGTACTTAAGCAGCTACAGGGAAGTATTGAAGATGAGACTATGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171187.8
CDS CCA 72 bp GCACGCGCAGTATGTCCTTTTCTATTTGCTGGATCCTaGCTATTCTTCGCTGTGCACGCTTCTCCATGTCCT +
Preference number: 6 (lower is better)
Translates to: ARAVCPFLFAGS*LFFAVHASPCP
Trigger: AGGACATGGAGAAGCGTGCACAGCGAAGAATAGCCAGGATCCAGCAAATAGAAAAGGACATACTGCGCGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066133.7
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CCA 72 bp GCCCGGTTGATTGGTAGTCTGGAAGGACTTTCAGAATaGGAGCGTGCAATATCATGCCGTTTTGTGGGCCTT +
Preference number: 6 (lower is better)
Translates to: ARLIGSLEGLSE*ERAISCRFVGL
Trigger: AAGGCCCACAAAACGGCATGATATTGCACGCTCCCATTCTGAAAGTCCTTCCAGACTACCAATCAACCGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CAA 72 bp GAGTCCAAGGCGAAGCTCCCCCGCACTCTGTCTTCATaGTTAGGTAGCTTTTCATTGAAGGCCTTGGCATTG +
Preference number: 6 (lower is better)
Translates to: ESKAKLPRTLSS*LGSFSLKALAL
Trigger: CAATGCCAAGGCCTTCAATGAAAAGCTACCTAACAATGAAGACAGAGTGCGGGGGAGCTTCGCCTTGGACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CAA 90 bp TCTTTGGAGGACTGGGGGAAAGTGGGCTGTTTCTGCAGCACTGGTTaGGACTGTGCTCTGTTTGCTGGATGTTTTATACTGGCTTGTGAC +
Preference number: 6 (lower is better)
Translates to: SLEDWGKVGCFCSTG*DCALFAGCFILACD
Trigger: GTCACAAGCCAGTATAAAACATCCAGCAAACAGAGCACAGTCCAAACCAGTGCTGCAGAAACAGCCCACTTTCCCCCAGTCCTCCAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS TCA 72 bp CTTGTACTAGAGGAGCTATTCCGAAGCCCTGGGATGTaGATCATCGTCCTGCCTCTTGAGATTGAAGGCATG +
Preference number: 6 (lower is better)
Translates to: LVLEELFRSPGM*IIVLPLEIEGM
Trigger: CATGCCTTCAATCTCAAGAGGCAGGACGATGATTCACATCCCAGGGCTTCGGAATAGCTCCTCTAGTACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS GCA 72 bp TGGTCATTAGTAAGCCCATACATCTCACAGTCCACCTaGAATAACTCTGCAATGGCCTGCAGTCCCCCAAGT +
Preference number: 6 (lower is better)
Translates to: WSLVSPYISQST*NNSAMACSPPS
Trigger: ACTTGGGGGACTGCAGGCCATTGCAGAGTTATTGCAGGTGGACTGTGAGATGTATGGGCTTACTAATGACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
ENSMUST00000171187.8
CDS GCA 72 bp GGATGTTTTATACTGGCTTGTGACTTACTAGCTGCCTaGTGGCTTGAGTTTGGTTCTGGGCGGCAGGTAACT +
Preference number: 6 (lower is better)
Translates to: GCFILACDLLAA*WLEFGSGRQVT
Trigger: AGTTACCTGCCGCCCAGAACCAAACTCAAGCCAGCAGGCAGCTAGTAAGTCACAAGCCAGTATAAAACATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS GCA 72 bp TTTCGCCCTGGAGACTGCATTGGCCTACTTAATGGTTaGTGTGTAGGTCTTGAGGGAGTGGAGTCTCTAGAT +
Preference number: 6 (lower is better)
Translates to: FRPGDCIGLLNG*CVGLEGVESLD
Trigger: ATCTAGAGACTCCACTCCCTCAAGACCTACACAGCAACCATTAAGTAGGCCAATGCAGTCTCCAGGGCGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CCA 72 bp CATACATCTCACAGTCCACCTGCAATAACTCTGCAATaGCCTGCAGTCCCCCAAGTTCATTCATTGCATGCC +
Preference number: 6 (lower is better)
Translates to: HTSHSPPAITLQ*PAVPQVHSLHA
Trigger: GGCATGCAATGAATGAACTTGGGGGACTGCAGGCCATTGCAGAGTTATTGCAGGTGGACTGTGAGATGTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
ENSMUST00000171187.8
CDS CCA 72 bp GCACCTGGTTTTCCTTCATCTGTCTGGGTGCTGGCATaGAGCTCACATGCCTTTCATCCTCACTTTTTGCTT +
Preference number: 6 (lower is better)
Translates to: APGFPSSVWVLA*SSHAFHPHFLL
Trigger: AAGCAAAAAGTGAGGATGAAAGGCATGTGAGCTCCATGCCAGCACCCAGACAGATGAAGGAAAACCAGGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CAA 72 bp CGGCAGGTAACTTTGGCTTCGGAATCCTTGCTTTCTTaGCCCTTTCTTAACTCGGCCTTTTCCCTGGAAAGG +
Preference number: 6 (lower is better)
Translates to: RQVTLASESLLS*PFLNSAFSLER
Trigger: CCTTTCCAGGGAAAAGGCCGAGTTAAGAAAGGGCAAAGAAAGCAAGGATTCCGAAGCCAAAGTTACCTGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CAA 72 bp TGCTGGCTTGAGTTTGGTTCTGGGCGGCAGGTAACTTaGGCTTCGGAATCCTTGCTTTCTTTGCCCTTTCTT +
Preference number: 6 (lower is better)
Translates to: CWLEFGSGRQVT*ASESLLSLPFL
Trigger: AAGAAAGGGCAAAGAAAGCAAGGATTCCGAAGCCAAAGTTACCTGCCGCCCAGAACCAAACTCAAGCCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CAA 72 bp GACTGGGGGAAAGTGGGCTGTTTCTGCAGCACTGGTTaGGACTGTGCTCTGTTTGCTGGATGTTTTATACTG +
Preference number: 6 (lower is better)
Translates to: DWGKVGCFCSTG*DCALFAGCFIL
Trigger: CAGTATAAAACATCCAGCAAACAGAGCACAGTCCAAACCAGTGCTGCAGAAACAGCCCACTTTCCCCCAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CAA 72 bp GCCCTGGGATGTGAATCATCGTCCTGCCTCTTGAGATaGAAGGCATGTTTGTCGGGAGGGGTTGTTTCATTT +
Preference number: 6 (lower is better)
Translates to: ALGCESSSCLLR*KACLSGGVVSF
Trigger: AAATGAAACAACCCCTCCCGACAAACATGCCTTCAATCTCAAGAGGCAGGACGATGATTCACATCCCAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CAA 90 bp TATTCCGAAGCCCTGGGATGTGAATCATCGTCCTGCCTCTTGAGATaGAAGGCATGTTTGTCGGGAGGGGTTGTTTCATTTGGCTGGAAA +
Preference number: 6 (lower is better)
Translates to: YSEALGCESSSCLLR*KACLSGGVVSFGWK
Trigger: TTTCCAGCCAAATGAAACAACCCCTCCCGACAAACATGCCTTCAATCTCAAGAGGCAGGACGATGATTCACATCCCAGGGCTTCGGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CAA 90 bp TTAAACAGACGTCACGAGGTAAGACCCGGAATGGCGTTTAGGACTTaGGGCTCCACTGGATTCTGTGCTGTCAGTCTTCGAATCTCTCTT +
Preference number: 6 (lower is better)
Translates to: LNRRHEVRPGMAFRT*GSTGFCAVSLRISL
Trigger: AAGAGAGATTCGAAGACTGACAGCACAGAATCCAGTGGAGCCCAAAGTCCTAAACGCCATTCCGGGTCTTACCTCGTGACGTCTGTTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS GCA 72 bp TTCAATAGCAAAATTCTGCAGTTTTTCGTCAGTTGCTaGCCCTCTATCTGGTCCGTCTTTGGAGGACTGGGG +
Preference number: 6 (lower is better)
Translates to: FNSKILQFFVSC*PSIWSVFGGLG
Trigger: CCCCAGTCCTCCAAAGACGGACCAGATAGAGGGGCAGCAACTGACGAAAAACTGCAGAATTTTGCTATTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS GCA 72 bp CCCATTGCCGTTACTCATCTGATTCAGTCCTTTAGATaGCGACTCACTTCTGGGGATACTGCTGGCATTCTT +
Preference number: 6 (lower is better)
Translates to: PIAVTHLIQSFR*RLTSGDTAGIL
Trigger: AAGAATGCCAGCAGTATCCCCAGAAGTGAGTCGGCATCTAAAGGACTGAATCAGATGAGTAACGGCAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS GCA 72 bp TCCTTCATCTGTCTGGGTGCTGGCATGGAGCTCACATaGCTTTCATCCTCACTTTTTGCTTTTTCACTGGAC +
Preference number: 6 (lower is better)
Translates to: SFICLGAGMELT*LSSSLFAFSLD
Trigger: GTCCAGTGAAAAAGCAAAAAGTGAGGATGAAAGGCATGTGAGCTCCATGCCAGCACCCAGACAGATGAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CCA 72 bp AGACATCCAGACTGCCGCATGGATATACAGCTGTCTTaGGAGCTGGACATAGCTAGCAAAGTTCGTGACATA +
Preference number: 6 (lower is better)
Translates to: RHPDCRMDIQLS*ELDIASKVRDI
Trigger: TATGTCACGAACTTTGCTAGCTATGTCCAGCTCCCAAGACAGCTGTATATCCATGCGGCAGTCTGGATGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
ENSMUST00000171187.8
CDS CCA 72 bp AGGGTTGGGCTTGGGGCTTCTTTGATGAAAGTAGACTaGCGTACTAATGCAGGCCTTTCTGATCTGTCTGAT +
Preference number: 6 (lower is better)
Translates to: RVGLGASLMKVD*RTNAGLSDLSD
Trigger: ATCAGACAGATCAGAAAGGCCTGCATTAGTACGCCAGTCTACTTTCATCAAAGAAGCCCCAAGCCCAACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CAA 72 bp GGGCACATCATCCCCTGGTGTAAAGCTAACATGTTTTaGTGCCTGCAGCCTATTCTGTGCTGGCAGAAGTTT +
Preference number: 6 (lower is better)
Translates to: GHIIPWCKANMF*CLQPILCWQKF
Trigger: AAACTTCTGCCAGCACAGAATAGGCTGCAGGCACAAAAACATGTTAGCTTTACACCAGGGGATGATGTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CAA 90 bp CGAGCCTCTTTACTGCCCCGGGAATTTCCCAACAATACAGAGTCTTaGTCATTGCCATGTAAAAGCTGGATGAGGAGAGGAAGACATCCA +
Preference number: 6 (lower is better)
Translates to: RASLLPREFPNNTES*SLPCKSWMRRGRHP
Trigger: TGGATGTCTTCCTCTCCTCATCCAGCTTTTACATGGCAATGACAAAGACTCTGTATTGTTGGGAAATTCCCGGGGCAGTAAAGAGGCTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
ENSMUST00000171187.8
CDS CAA 90 bp TCTTTACTGCCCCGGGAATTTCCCAACAATACAGAGTCTTTGTCATaGCCATGTAAAAGCTGGATGAGGAGAGGAAGACATCCAGACTGC +
Preference number: 6 (lower is better)
Translates to: SLLPREFPNNTESLS*PCKSWMRRGRHPDC
Trigger: GCAGTCTGGATGTCTTCCTCTCCTCATCCAGCTTTTACATGGCAATGACAAAGACTCTGTATTGTTGGGAAATTCCCGGGGCAGTAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
ENSMUST00000171187.8
CDS CAA 90 bp GCGAAGCTCCCCCGCACTCTGTCTTCATTGTTAGGTAGCTTTTCATaGAAGGCCTTGGCATTGGTTTGTAAGCTTGGTTTCTTTGAGTCT +
Preference number: 6 (lower is better)
Translates to: AKLPRTLSSLLGSFS*KALALVCKLGFFES
Trigger: AGACTCAAAGAAACCAAGCTTACAAACCAATGCCAAGGCCTTCAATGAAAAGCTACCTAACAATGAAGACAGAGTGCGGGGGAGCTTCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CAA 90 bp CTGGGATGTGAATCATCGTCCTGCCTCTTGAGATTGAAGGCATGTTaGTCGGGAGGGGTTGTTTCATTTGGCTGGAAATTTCTGAATTGG +
Preference number: 6 (lower is better)
Translates to: LGCESSSCLLRLKAC*SGGVVSFGWKFLNW
Trigger: CCAATTCAGAAATTTCCAGCCAAATGAAACAACCCCTCCCGACAAACATGCCTTCAATCTCAAGAGGCAGGACGATGATTCACATCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS TCA 72 bp GAAAGCTTCATTAGAACACACACAGCAGGACAGATCTaGTGCTCAACAGGAGCTGGCATTGGGTTTTTGTCC +
Preference number: 6 (lower is better)
Translates to: ESFIRTHTAGQI*CSTGAGIGFLS
Trigger: GGACAAAAACCCAATGCCAGCTCCTGTTGAGCATCAGATCTGTCCTGCTGTGTGTGTTCTAATGAAGCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
ENSMUST00000171187.8
CDS GCA 72 bp TCTTCAGCTAATATGCCACCCACTTTTCTAGGGCTCTaGTTTTCGCTCTCACTCTTGAGTCTTGAAGGCCTT +
Preference number: 6 (lower is better)
Translates to: SSANMPPTFLGL*FSLSLLSLEGL
Trigger: AAGGCCTTCAAGACTCAAGAGTGAGAGCGAAAAGCAGAGCCCTAGAAAAGTGGGTGGCATATTAGCTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CCA 72 bp TGGAGGAACAAGAAAACCCGTCTGGAGTACTTTCTGTaGCGAAGTGTAACAAAGTATCCACGTCTGGAAGGA +
Preference number: 6 (lower is better)
Translates to: WRNKKTRLEYFL*RSVTKYPRLEG
Trigger: TCCTTCCAGACGTGGATACTTTGTTACACTTCGCCACAGAAAGTACTCCAGACGGGTTTTCTTGTTCCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CCA 72 bp TGCTATACACGTCTCAGCAGTCTCTGCTATAGAGACTaGGTTACTCTGTCCTGGTTTTGCCTCAGTTCCTTT +
Preference number: 6 (lower is better)
Translates to: CYTRLSSLCYRD*VTLSWFCLSSF
Trigger: AAAGGAACTGAGGCAAAACCAGGACAGAGTAACCCAGTCTCTATAGCAGAGACTGCTGAGACGTGTATAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS TCA 72 bp TTCTGTAGGAATGGTATCTCGTTTTTCAAATTCACCTaGCTGTATACCCGCTCTGACCCCATCTCCAGTAGC +
Preference number: 6 (lower is better)
Translates to: FCRNGISFFKFT*LYTRSDPISSS
Trigger: GCTACTGGAGATGGGGTCAGAGCGGGTATACAGTCAGGTGAATTTGAAAAACGAGATACCATTCCTACAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS GCA 72 bp ATTGCAGCCCTGATCTGCCTTGCTTCATACTCCAGCTaGCGTCTTGTCATGTCTGTCTGTAAGGAAAAATTT +
Preference number: 6 (lower is better)
Translates to: IAALICLASYSS*RLVMSVCKEKF
Trigger: AAATTTTTCCTTACAGACAGACATGACAAGACGGCAGCTGGAGTATGAAGCAAGGCAGATCAGGGCTGCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000066133.7
ENSMUST00000079362.13
ENSMUST00000115781.10
ENSMUST00000171187.8
CDS CCA 72 bp TTAGCTCCAGATGAAGTCGAGGATGCTTGTTGGACTTaGTCCATTATCTTTTTCACTCGGAAAGGCTTGTGG +
Preference number: 6 (lower is better)
Translates to: LAPDEVEDACWT*SIIFFTRKGLW
Trigger: CCACAAGCCTTTCCGAGTGAAAAAGATAATGGACCAAGTCCAACAAGCATCCTCGACTTCATCTGGAGCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CAA 72 bp CCCCGGGAATTTCCCAACAATACAGAGTCTTTGTCATaGCCATGTAAAAGCTGGATGAGGAGAGGAAGACAT +
Preference number: 6 (lower is better)
Translates to: PREFPNNTESLS*PCKSWMRRGRH
Trigger: ATGTCTTCCTCTCCTCATCCAGCTTTTACATGGCAATGACAAAGACTCTGTATTGTTGGGAAATTCCCGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
ENSMUST00000171187.8
CDS CAA 72 bp TTACTGCCCCGGGAATTTCCCAACAATACAGAGTCTTaGTCATTGCCATGTAAAAGCTGGATGAGGAGAGGA +
Preference number: 6 (lower is better)
Translates to: LLPREFPNNTES*SLPCKSWMRRG
Trigger: TCCTCTCCTCATCCAGCTTTTACATGGCAATGACAAAGACTCTGTATTGTTGGGAAATTCCCGGGGCAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
ENSMUST00000171187.8
CDS CAA 72 bp ACTCTGCAATGGCCTGCAGTCCCCCAAGTTCATTCATaGCATGCCTATGCTCTTCATCAAATGAAAGCTTCA +
Preference number: 6 (lower is better)
Translates to: TLQWPAVPQVHS*HAYALHQMKAS
Trigger: TGAAGCTTTCATTTGATGAAGAGCATAGGCATGCAATGAATGAACTTGGGGGACTGCAGGCCATTGCAGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
ENSMUST00000171187.8
CDS CAA 72 bp GGTGGAGGTAATTTTGAAGCAGTCTGGGCTAGTTTTTaGGCTTTGCGTGATGACTTTGTTGGCATGGCTGAA +
Preference number: 6 (lower is better)
Translates to: GGGNFEAVWASF*ALRDDFVGMAE
Trigger: TTCAGCCATGCCAACAAAGTCATCACGCAAAGCCAAAAAACTAGCCCAGACTGCTTCAAAATTACCTCCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CAA 72 bp TCTGTGCTGGCAGAAGTTTATACACAGGTAGCTGACTaGGTTTCCTTGCCACAGGTGGAGGTAATTTTGAAG +
Preference number: 6 (lower is better)
Translates to: SVLAEVYTQVAD*VSLPQVEVILK
Trigger: CTTCAAAATTACCTCCACCTGTGGCAAGGAAACCAAGTCAGCTACCTGTGTATAAACTTCTGCCAGCACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CAA 72 bp CCCCGCACTCTGTCTTCATTGTTAGGTAGCTTTTCATaGAAGGCCTTGGCATTGGTTTGTAAGCTTGGTTTC +
Preference number: 6 (lower is better)
Translates to: PRTLSSLLGSFS*KALALVCKLGF
Trigger: GAAACCAAGCTTACAAACCAATGCCAAGGCCTTCAATGAAAAGCTACCTAACAATGAAGACAGAGTGCGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CAA 72 bp GAATCATCGTCCTGCCTCTTGAGATTGAAGGCATGTTaGTCGGGAGGGGTTGTTTCATTTGGCTGGAAATTT +
Preference number: 6 (lower is better)
Translates to: ESSSCLLRLKAC*SGGVVSFGWKF
Trigger: AAATTTCCAGCCAAATGAAACAACCCCTCCCGACAAACATGCCTTCAATCTCAAGAGGCAGGACGATGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CAA 90 bp AGTCCTTTAGATGCCGACTCACTTCTGGGGATACTGCTGGCATTCTaGGATAAACTTGCTTGTTTGGTAAGATTTTGTTGGCTCAGCTGT +
Preference number: 6 (lower is better)
Translates to: SPLDADSLLGILLAF*DKLACLVRFCWLSC
Trigger: ACAGCTGAGCCAACAAAATCTTACCAAACAAGCAAGTTTATCCAAGAATGCCAGCAGTATCCCCAGAAGTGAGTCGGCATCTAAAGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS TCA 72 bp CTATTCTGTGCTGGCAGAAGTTTATACACAGGTAGCTaGCTTGGTTTCCTTGCCACAGGTGGAGGTAATTTT +
Preference number: 6 (lower is better)
Translates to: LFCAGRSLYTGS*LGFLATGGGNF
Trigger: AAAATTACCTCCACCTGTGGCAAGGAAACCAAGTCAGCTACCTGTGTATAAACTTCTGCCAGCACAGAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS TCA 72 bp TGGTGCAAACTACTTACTATGGAGTTTGCGCCTTCCTaGATAGCTTTCCAGTCAAAATTTTCTGAGTCGGGG +
Preference number: 6 (lower is better)
Translates to: WCKLLTMEFAPS*IAFQSKFSESG
Trigger: CCCCGACTCAGAAAATTTTGACTGGAAAGCTATTCAGGAAGGCGCAAACTCCATAGTAAGTAGTTTGCACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS TCA 72 bp TCTACCTTTTTATTTGACCCATTGCCGTTACTCATCTaGTTCAGTCCTTTAGATGCCGACTCACTTCTGGGG +
Preference number: 6 (lower is better)
Translates to: STFLFDPLPLLI*FSPLDADSLLG
Trigger: CCCCAGAAGTGAGTCGGCATCTAAAGGACTGAATCAGATGAGTAACGGCAATGGGTCAAATAAAAAGGTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS GCA 72 bp TCATCCCCTGGTGTAAAGCTAACATGTTTTTGTGCCTaGAGCCTATTCTGTGCTGGCAGAAGTTTATACACA +
Preference number: 6 (lower is better)
Translates to: SSPGVKLTCFCA*SLFCAGRSLYT
Trigger: TGTGTATAAACTTCTGCCAGCACAGAATAGGCTGCAGGCACAAAAACATGTTAGCTTTACACCAGGGGATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS GCA 72 bp CACATCATCCCCTGGTGTAAAGCTAACATGTTTTTGTaGCTGCAGCCTATTCTGTGCTGGCAGAAGTTTATA +
Preference number: 6 (lower is better)
Translates to: HIIPWCKANMFL*LQPILCWQKFI
Trigger: TATAAACTTCTGCCAGCACAGAATAGGCTGCAGGCACAAAAACATGTTAGCTTTACACCAGGGGATGATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CAA 72 bp TCTTGGGCCTTTATTGCTTGTGAATGGCTTTTCCTCTaGATCAGGTGTAAGATGAAAAGGCGATCCCAGAGA +
Preference number: 6 (lower is better)
Translates to: SWAFIACEWLFL*IRCKMKRRSQR
Trigger: TCTCTGGGATCGCCTTTTCATCTTACACCTGATCAAGAGGAAAAGCCATTCACAAGCAATAAAGGCCCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CAA 90 bp CTAGCAAAGTTCGTGACATATCGTCCTTATCATGAGTACCAAGCATaGACAACAAGGAATACACCATTTCCACCTTTGTCCCCAGATGAC +
Preference number: 6 (lower is better)
Translates to: LAKFVTYRPYHEYQA*TTRNTPFPPLSPDD
Trigger: GTCATCTGGGGACAAAGGTGGAAATGGTGTATTCCTTGTTGTCAATGCTTGGTACTCATGATAAGGACGATATGTCACGAACTTTGCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
ENSMUST00000171187.8
CDS CAA 90 bp CCCCGCACTCTGTCTTCATTGTTAGGTAGCTTTTCATTGAAGGCCTaGGCATTGGTTTGTAAGCTTGGTTTCTTTGAGTCTTTGTTGTCT +
Preference number: 6 (lower is better)
Translates to: PRTLSSLLGSFSLKA*ALVCKLGFFESLLS
Trigger: AGACAACAAAGACTCAAAGAAACCAAGCTTACAAACCAATGCCAAGGCCTTCAATGAAAAGCTACCTAACAATGAAGACAGAGTGCGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CAA 90 bp TTTGAGAATTCTTGGGCCTTTATTGCTTGTGAATGGCTTTTCCTCTaGATCAGGTGTAAGATGAAAAGGCGATCCCAGAGAAATGCCGGA +
Preference number: 6 (lower is better)
Translates to: FENSWAFIACEWLFL*IRCKMKRRSQRNAG
Trigger: TCCGGCATTTCTCTGGGATCGCCTTTTCATCTTACACCTGATCAAGAGGAAAAGCCATTCACAAGCAATAAAGGCCCAAGAATTCTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS TCA 72 bp TGTCGGGAGGGGTTGTTTCATTTGGCTGGAAATTTCTaGATTGGAGCGAATCTTTCCCGTAATCAAGCTTTT +
Preference number: 6 (lower is better)
Translates to: CREGLFHLAGNF*IGANLSRNQAF
Trigger: AAAAGCTTGATTACGGGAAAGATTCGCTCCAATTCAGAAATTTCCAGCCAAATGAAACAACCCCTCCCGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS GCA 72 bp TGCAGCAGCTTGGTGCAAACTACTTACTATGGAGTTTaGGCCTTCCTGAATAGCTTTCCAGTCAAAATTTTC +
Preference number: 6 (lower is better)
Translates to: CSSLVQTTYYGV*AFLNSFPVKIF
Trigger: GAAAATTTTGACTGGAAAGCTATTCAGGAAGGCGCAAACTCCATAGTAAGTAGTTTGCACCAAGCTGCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CCA 72 bp TTTTTGTTAGCTCCAGATGAAGTCGAGGATGCTTGTTaGACTTGGTCCATTATCTTTTTCACTCGGAAAGGC +
Preference number: 6 (lower is better)
Translates to: FLLAPDEVEDAC*TWSIIFFTRKG
Trigger: GCCTTTCCGAGTGAAAAAGATAATGGACCAAGTCCAACAAGCATCCTCGACTTCATCTGGAGCTAACAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CAA 90 bp GATGCTTGTTGGACTTGGTCCATTATCTTTTTCACTCGGAAAGGCTaGTGGCTTTTTCCTTTGGGCATAGCAGAATTGATACATTCTGCA +
Preference number: 6 (lower is better)
Translates to: DACWTWSIIFFTRKG*WLFPLGIAELIHSA
Trigger: TGCAGAATGTATCAATTCTGCTATGCCCAAAGGAAAAAGCCACAAGCCTTTCCGAGTGAAAAAGATAATGGACCAAGTCCAACAAGCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS TCA 72 bp TGCTTTGTTGTCATCCAGGTCTGGTGTAACTATAGATaGGATTTTTCCTCGCTGAGCATCATCTGTACTTCT +
Preference number: 6 (lower is better)
Translates to: CFVVIQVWCNYR*DFSSLSIICTS
Trigger: AGAAGTACAGATGATGCTCAGCGAGGAAAAATCTCATCTATAGTTACACCAGACCTGGATGACAACAAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CAA 72 bp TTCGTGACATATCGTCCTTATCATGAGTACCAAGCATaGACAACAAGGAATACACCATTTCCACCTTTGTCC +
Preference number: 6 (lower is better)
Translates to: FVTYRPYHEYQA*TTRNTPFPPLS
Trigger: GGACAAAGGTGGAAATGGTGTATTCCTTGTTGTCAATGCTTGGTACTCATGATAAGGACGATATGTCACGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
ENSMUST00000171187.8
CDS CAA 72 bp TGGACTTGGTCCATTATCTTTTTCACTCGGAAAGGCTaGTGGCTTTTTCCTTTGGGCATAGCAGAATTGATA +
Preference number: 6 (lower is better)
Translates to: WTWSIIFFTRKG*WLFPLGIAELI
Trigger: TATCAATTCTGCTATGCCCAAAGGAAAAAGCCACAAGCCTTTCCGAGTGAAAAAGATAATGGACCAAGTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS GCA 72 bp ATGCTTTCACACTTCCAACTTCTCTCAACGTCTTTTTaGTATTTACATCTGCTCGCCAAGACAAATTCCTCA +
Preference number: 6 (lower is better)
Translates to: MLSHFQLLSTSF*YLHLLAKTNSS
Trigger: TGAGGAATTTGTCTTGGCGAGCAGATGTAAATAGCAAAAAGACGTTGAGAGAAGTTGGAAGTGTGAAAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
ENSMUST00000171187.8
CDS CCA 72 bp ACTTGGTCCATTATCTTTTTCACTCGGAAAGGCTTGTaGCTTTTTCCTTTGGGCATAGCAGAATTGATACAT +
Preference number: 6 (lower is better)
Translates to: TWSIIFFTRKGL*LFPLGIAELIH
Trigger: ATGTATCAATTCTGCTATGCCCAAAGGAAAAAGCCACAAGCCTTTCCGAGTGAAAAAGATAATGGACCAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CCA 72 bp AGGTTTGAGAATTCTTGGGCCTTTATTGCTTGTGAATaGCTTTTCCTCTTGATCAGGTGTAAGATGAAAAGG +
Preference number: 6 (lower is better)
Translates to: RFENSWAFIACE*LFLLIRCKMKR
Trigger: CCTTTTCATCTTACACCTGATCAAGAGGAAAAGCCATTCACAAGCAATAAAGGCCCAAGAATTCTCAAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CAA 72 bp AGTCAGGCTTTTCTACCTCTTTATCCTGGTTTTCATTaGATTCCTCAGGCTGTTCTGATTCAGTTTCATTCC +
Preference number: 6 (lower is better)
Translates to: SQAFLPLYPGFH*IPQAVLIQFHS
Trigger: GGAATGAAACTGAATCAGAACAGCCTGAGGAATCAAATGAAAACCAGGATAAAGAGGTAGAAAAGCCTGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CAA 72 bp CTGTCTTCATTGTTAGGTAGCTTTTCATTGAAGGCCTaGGCATTGGTTTGTAAGCTTGGTTTCTTTGAGTCT +
Preference number: 6 (lower is better)
Translates to: LSSLLGSFSLKA*ALVCKLGFFES
Trigger: AGACTCAAAGAAACCAAGCTTACAAACCAATGCCAAGGCCTTCAATGAAAAGCTACCTAACAATGAAGACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CAA 90 bp CATTCCATCAATGCTTTCACACTTCCAACTTCTCTCAACGTCTTTTaGCTATTTACATCTGCTCGCCAAGACAAATTCCTCAAAACACTT +
Preference number: 6 (lower is better)
Translates to: HSINAFTLPTSLNVF*LFTSARQDKFLKTL
Trigger: AAGTGTTTTGAGGAATTTGTCTTGGCGAGCAGATGTAAATAGCAAAAAGACGTTGAGAGAAGTTGGAAGTGTGAAAGCATTGATGGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
ENSMUST00000171187.8
CDS CAA 90 bp ACTCTGTCTTCATTGTTAGGTAGCTTTTCATTGAAGGCCTTGGCATaGGTTTGTAAGCTTGGTTTCTTTGAGTCTTTGTTGTCTGAGAAA +
Preference number: 6 (lower is better)
Translates to: TLSSLLGSFSLKALA*VCKLGFFESLLSEK
Trigger: TTTCTCAGACAACAAAGACTCAAAGAAACCAAGCTTACAAACCAATGCCAAGGCCTTCAATGAAAAGCTACCTAACAATGAAGACAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS GCA 72 bp GAAGTCATAGTCTCATCTTCAATACTTCCCTGTAGCTaGTTAAGTACTTCCTTCATATTAGATGCCTCAGTT +
Preference number: 6 (lower is better)
Translates to: EVIVSSSILPCS*LSTSFILDASV
Trigger: AACTGAGGCATCTAATATGAAGGAAGTACTTAAGCAGCTACAGGGAAGTATTGAAGATGAGACTATGACTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066133.7
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CCA 72 bp TTCTTGGATAAACTTGCTTGTTTGGTAAGATTTTGTTaGCTCAGCTGTCTACCTGGGGATGTATATGACATT +
Preference number: 6 (lower is better)
Translates to: FLDKLACLVRFC*LSCLPGDVYDI
Trigger: AATGTCATATACATCCCCAGGTAGACAGCTGAGCCAACAAAATCTTACCAAACAAGCAAGTTTATCCAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CAA 72 bp GATGATTGGAATTATCTTCTAGCTCTTGTCGAAGATTaGAGTTCTCCATCTTCAGTGCCTCAACTTGCTTTA +
Preference number: 6 (lower is better)
Translates to: DDWNYLLALVED*SSPSSVPQLAL
Trigger: TAAAGCAAGTTGAGGCACTGAAGATGGAGAACTCAAATCTTCGACAAGAGCTAGAAGATAATTCCAATCATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000066133.7
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS CAA 72 bp TCATTGTTAGGTAGCTTTTCATTGAAGGCCTTGGCATaGGTTTGTAAGCTTGGTTTCTTTGAGTCTTTGTTG +
Preference number: 6 (lower is better)
Translates to: SLLGSFSLKALA*VCKLGFFESLL
Trigger: CAACAAAGACTCAAAGAAACCAAGCTTACAAACCAATGCCAAGGCCTTCAATGAAAAGCTACCTAACAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10
CDS TCA 72 bp TGTTCTGATTCAGTTTCATTCCCATTGTCGTTTTCCTaGACTGGAGGCATGATTCTTAATTCTACATCTTTC +
Preference number: 6 (lower is better)
Translates to: CSDSVSFPLSFS*TGGMILNSTSF
Trigger: GAAAGATGTAGAATTAAGAATCATGCCTCCAGTTCAGGAAAACGACAATGGGAATGAAACTGAATCAGAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079362.13
ENSMUST00000115781.10