Pregenerated sensors for AP5S1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068264Ensembl transcript IDs: ENSMUST00000089506.12, ENSMUST00000110206.2, ENSMUST00000110208.8, ENSMUST00000110210.8, ENSMUST00000153097.3
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCAGCCGGAGGTGGTCAAGGAGGAGGCGAGCCAAGAGCCGGAGCGTaGGCTCAGCCAGCAGCAGGTTCTCATGGGTGTCCAACACCAGGG | + |
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Preference number: 1 (lower is better) Translates to: AAGGGQGGGEPRAGA*AQPAAGSHGCPTPG Trigger: CCCTGGTGTTGGACACCCATGAGAACCTGCTGCTGGCTGAGCGCACGCTCCGGCTCTTGGCTCGCCTCCTCCTTGACCACCTCCGGCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110206.2 |
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| 3UTR TCA 90 bp | TTCTACCCAGGTCCCTTCCTTCGGGCTTGCCCAATCCGTATGTCCTaGGCGTGGCCACACATCAGAGCAGGGAGCAGGCTGGGCAAGAGG | + |
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Preference number: 1 (lower is better) Translates to: FYPGPFLRACPIRMS*AWPHIRAGSRLGKR Trigger: CCTCTTGCCCAGCCTGCTCCCTGCTCTGATGTGTGGCCACGCTCAGGACATACGGATTGGGCAAGCCCGAAGGAAGGGACCTGGGTAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110208.8 |
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| 3UTR CCA 90 bp | GAGGATTCCCTCAATACGGTCAGCCCGCAACAAGAAGTTGGTACCTaGTGTCAGCAGCCGGAGGTGGTCAAGGAGGAGGCGAGCCAAGAG | + |
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Preference number: 1 (lower is better) Translates to: EDSLNTVSPQQEVGT*CQQPEVVKEEASQE Trigger: CTCTTGGCTCGCCTCCTCCTTGACCACCTCCGGCTGCTGACACCAGGTACCAACTTCTTGTTGCGGGCTGACCGTATTGAGGGAATCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110206.2 |
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| 3UTR CCA 90 bp | TCCGTATGTCCTGAGCGTGGCCACACATCAGAGCAGGGAGCAGGCTaGGCAAGAGGCAGATGCCACACTTCCCCTAGCAGTATGCAACCT | + |
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Preference number: 1 (lower is better) Translates to: SVCPERGHTSEQGAG*ARGRCHTSPSSMQP Trigger: AGGTTGCATACTGCTAGGGGAAGTGTGGCATCTGCCTCTTGCCCAGCCTGCTCCCTGCTCTGATGTGTGGCCACGCTCAGGACATACGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110208.8 |
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| 3UTR GCA 90 bp | CGTGGCCACACATCAGAGCAGGGAGCAGGCTGGGCAAGAGGCAGATaGCACACTTCCCCTAGCAGTATGCAACCTTTACCCTCGCTCTTT | + |
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Preference number: 1 (lower is better) Translates to: RGHTSEQGAGWARGR*HTSPSSMQPLPSLF Trigger: AAAGAGCGAGGGTAAAGGTTGCATACTGCTAGGGGAAGTGTGGCATCTGCCTCTTGCCCAGCCTGCTCCCTGCTCTGATGTGTGGCCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110208.8 |
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| 3UTR CCA 90 bp | CAGATCCTGGACAAACTGGTCATTGAGGAAAAGCAGCTGCCCATGTaGCAGGAAGCGGGTGAGGATTCCCTCAATACGGTCAGCCCGCAA | + |
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Preference number: 1 (lower is better) Translates to: QILDKLVIEEKQLPM*QEAGEDSLNTVSPQ Trigger: TTGCGGGCTGACCGTATTGAGGGAATCCTCACCCGCTTCCTGCCACATGGGCAGCTGCTTTTCCTCAATGACCAGTTTGTCCAGGATCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110206.2 |
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| 3UTR TCA 90 bp | GCCTACGCGATCACGGGGCGGTTCCAGCTTCAGGATGCTCTACAATaGATACTTTACAATTCCAGTGGCCTGAGGACAGGCACAGACAGC | + |
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Preference number: 1 (lower is better) Translates to: AYAITGRFQLQDALQ*ILYNSSGLRTGTDS Trigger: GCTGTCTGTGCCTGTCCTCAGGCCACTGGAATTGTAAAGTATTCATTGTAGAGCATCCTGAAGCTGGAACCGCCCCGTGATCGCGTAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110208.8 |
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| 3UTR-3UTR GCA 90 bp | ATAAGGCATCACCTGGGCCAGACGCCTGGCCCCTGCCAGCCAGCAGACAAGAAACAGACGCCTGGCCCCTaGCAGCCAGCAGACAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: IRHHLGQTPGPCQPADKKQTPGP*QPADKK Trigger: TTTCTTGTCTGCTGGCTGGCAGGGGCCAGGCGTCTG...TTTCTTGTCTGCTGGCTGGCAGGGGCCAGGCGTCTGGCCCAGGTGATGCCTTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 |
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| 3UTR-3UTR GCA 90 bp | ATCCTTGCTGATGAGCAAAGGCAGGGACCGGGGCTTGCTAGGGTACCAGCCCAGGTGAGCTCGGCAGTATaGTGCTCCAGTGCTGACAGC | + |
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Preference number: 2 (lower is better) Translates to: ILADEQRQGPGLARVPAQVSSAV*CSSADS Trigger: GCTGTCAGCACTGGAGCAGCATACTGCCGAGCTCAC...CTGGGCTGGTACCCTAGCAAGCCCCGGTCCCTGCCTTTGCTCATCAGCAAGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 |
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| 3UTR-3UTR GCA 90 bp | TGGCACATAAGGAACCGCAGAATCCCCCTGCTCTGCACTGTGGGGGAGCTAGAAACCGCAGAATCCCCCTaGTCTGCACTGTGGGGGAGC | + |
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Preference number: 2 (lower is better) Translates to: WHIRNRRIPLLCTVGELETAESP*SALWGS Trigger: GCTCCCCCACAGTGCAGAGCAGGGGGATTCTGCGGT...TTCTAGCTCCCCCACAGTGCAGAGCAGGGGGATTCTGCGGTTCCTTATGTGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt. Matches the following 3 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 |
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| 3UTR-3UTR CCA 90 bp | CATAAGGAACCGCAGAATCCCCCTGCTCTGCACTGTGGGGGAGCTAGAAGCAGAGAGCAGGGAGCAGGCTaGGCAAGAGGCAGATGCCAC | + |
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Preference number: 2 (lower is better) Translates to: HKEPQNPPALHCGGARSREQGAG*ARGRCH Trigger: GTGGCATCTGCCTCTTGCCCAGCCTGCTCCCTGCTC...TCTGCTTCTAGCTCCCCCACAGTGCAGAGCAGGGGGATTCTGCGGTTCCTTATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000110208.8 |
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| 3UTR CAA 90 bp | AAGCGGGTGAGGATTCCCTCAATACGGTCAGCCCGCAACAAGAAGTaGGTACCTGGTGTCAGCAGCCGGAGGTGGTCAAGGAGGAGGCGA | + |
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Preference number: 2 (lower is better) Translates to: KRVRIPSIRSARNKK*VPGVSSRRWSRRRR Trigger: TCGCCTCCTCCTTGACCACCTCCGGCTGCTGACACCAGGTACCAACTTCTTGTTGCGGGCTGACCGTATTGAGGGAATCCTCACCCGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110206.2 |
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| 3UTR CAA 90 bp | CCTGCCAGCCAGCAGACAAGAAAAGCTGTTGTGTTCTCAGCTCTCTaGGCAGACACGGGGGCATGGCACATAAGGAACCGCAGAATCCCC | + |
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Preference number: 2 (lower is better) Translates to: PASQQTRKAVVFSAL*ADTGAWHIRNRRIP Trigger: GGGGATTCTGCGGTTCCTTATGTGCCATGCCCCCGTGTCTGCCAAGAGAGCTGAGAACACAACAGCTTTTCTTGTCTGCTGGCTGGCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 |
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| 3UTR-3UTR TCA 90 bp | GGGCCAGACGCCTGGCCCCTGCCAGCCAGCAGACAAGAAAAGCTGTTGTGTTCTGCTGGTAGGGTTGAATaGAGAGGAGTCAAAGACTCG | + |
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Preference number: 2 (lower is better) Translates to: GPDAWPLPASRQEKLLCSAGRVE*RGVKDS Trigger: CGAGTCTTTGACTCCTCTTCATTCAACCCTACCAGC...AGAACACAACAGCTTTTCTTGTCTGCTGGCTGGCAGGGGCCAGGCGTCTGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGGCCCCTGCCAGCCAGCAGACAAGAAAAGCTGTTGTGTTCTCAGCTCTCTTGTGAGCTCGGCAGTATaGTGCTCCAGTGCTGACAGC | + |
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Preference number: 2 (lower is better) Translates to: PGPCQPADKKSCCVLSSLVSSAV*CSSADS Trigger: GCTGTCAGCACTGGAGCAGCATACTGCCGAGCTCAC...AAGAGAGCTGAGAACACAACAGCTTTTCTTGTCTGCTGGCTGGCAGGGGCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 |
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| 3UTR-3UTR GCA 90 bp | CTGATGAGCAAAGGCAGGGACCGGGGCTTGCTAGGGTACCAGCCCAGTTCTCCACTTCCCCTAGCAGTATaGAACCTTTACCCTCGCTCT | + |
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Preference number: 2 (lower is better) Translates to: LMSKGRDRGLLGYQPSSPLPLAV*NLYPRS Trigger: AGAGCGAGGGTAAAGGTTGCATACTGCTAGGGGAAG...TGGAGAACTGGGCTGGTACCCTAGCAAGCCCCGGTCCCTGCCTTTGCTCATCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110208.8 |
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| 3UTR-3UTR GCA 90 bp | CTGAATTCCTTCTCCAGATCCTGGACAAACTGGTCATTGAGGAAAAGCAGCTGCCCAAGAGCCGGAGCGTaGGCTCAGCCAGCAGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: LNSFSRSWTNWSLRKSSCPRAGA*AQPAAG Trigger: ACCTGCTGCTGGCTGAGCGCACGCTCCGGCTCTTGG...GCAGCTGCTTTTCCTCAATGACCAGTTTGTCCAGGATCTGGAGAAGGAATTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110206.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGAACCGCAGAATCCCCCTGCTCTGCACTGTGGGGGAGCTAGAAGCAGAACAGCTGGTAGGGTTGAATaGAGAGGAGTCAAAGACTCG | + |
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Preference number: 2 (lower is better) Translates to: KEPQNPPALHCGGARSRTAGRVE*RGVKDS Trigger: CGAGTCTTTGACTCCTCTTCATTCAACCCTACCAGC...TGTTCTGCTTCTAGCTCCCCCACAGTGCAGAGCAGGGGGATTCTGCGGTTCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCTCCAGATCCTGGACAAACTGGTCATTGAGGAAAAGCAGCTGCCCATGTGGAGCAGCAGGTTCTCATaGGTGTCCAACACCAGGGCG | + |
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Preference number: 2 (lower is better) Translates to: LLQILDKLVIEEKQLPMWSSRFS*VSNTRA Trigger: CGCCCTGGTGTTGGACACCCATGAGAACCTGCTGCT...CCACATGGGCAGCTGCTTTTCCTCAATGACCAGTTTGTCCAGGATCTGGAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110206.2 |
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| 3UTR CAA 90 bp | CAAGCAGCACTGAATTCCTTCTCCAGATCCTGGACAAACTGGTCATaGAGGAAAAGCAGCTGCCCATGTGGCAGGAAGCGGGTGAGGATT | + |
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Preference number: 2 (lower is better) Translates to: QAALNSFSRSWTNWS*RKSSCPCGRKRVRI Trigger: AATCCTCACCCGCTTCCTGCCACATGGGCAGCTGCTTTTCCTCAATGACCAGTTTGTCCAGGATCTGGAGAAGGAATTCAGTGCTGCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110206.2 |
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| 3UTR TCA 72 bp | GGTCCCTTCCTTCGGGCTTGCCCAATCCGTATGTCCTaGGCGTGGCCACACATCAGAGCAGGGAGCAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: GPFLRACPIRMS*AWPHIRAGSRL Trigger: CAGCCTGCTCCCTGCTCTGATGTGTGGCCACGCTCAGGACATACGGATTGGGCAAGCCCGAAGGAAGGGACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110208.8 |
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| 3UTR CCA 72 bp | CTCAATACGGTCAGCCCGCAACAAGAAGTTGGTACCTaGTGTCAGCAGCCGGAGGTGGTCAAGGAGGAGGCG | + |
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Preference number: 3 (lower is better) Translates to: LNTVSPQQEVGT*CQQPEVVKEEA Trigger: CGCCTCCTCCTTGACCACCTCCGGCTGCTGACACCAGGTACCAACTTCTTGTTGCGGGCTGACCGTATTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110206.2 |
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| 3UTR CCA 72 bp | GTTGTGTTCTCAGCTCTCTTGGCAGACACGGGGGCATaGCACATAAGGAACCGCAGAATCCCCCTGCTCTGC | + |
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Preference number: 3 (lower is better) Translates to: VVFSALLADTGA*HIRNRRIPLLC Trigger: GCAGAGCAGGGGGATTCTGCGGTTCCTTATGTGCCATGCCCCCGTGTCTGCCAAGAGAGCTGAGAACACAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 |
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| 3UTR CCA 72 bp | GGATTCCCTCAATACGGTCAGCCCGCAACAAGAAGTTaGTACCTGGTGTCAGCAGCCGGAGGTGGTCAAGGA | + |
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Preference number: 3 (lower is better) Translates to: GFPQYGQPATRS*YLVSAAGGGQG Trigger: TCCTTGACCACCTCCGGCTGCTGACACCAGGTACCAACTTCTTGTTGCGGGCTGACCGTATTGAGGGAATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110206.2 |
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| 3UTR CCA 72 bp | GCAGCACTGAATTCCTTCTCCAGATCCTGGACAAACTaGTCATTGAGGAAAAGCAGCTGCCCATGTGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: AALNSFSRSWTN*SLRKSSCPCGR Trigger: CCTGCCACATGGGCAGCTGCTTTTCCTCAATGACCAGTTTGTCCAGGATCTGGAGAAGGAATTCAGTGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110206.2 |
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| 3UTR-3UTR CAA 90 bp | CATAAGGAACCGCAGAATCCCCCTGCTCTGCACTGTGGGGGAGCTAGAAGCAGAAGACAAGAAAAGCTGTaGTGTTCTCAGCTCTCTTGG | + |
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Preference number: 3 (lower is better) Translates to: HKEPQNPPALHCGGARSRRQEKL*CSQLSW Trigger: CCAAGAGAGCTGAGAACACAACAGCTTTTCTTGTCT...TCTGCTTCTAGCTCCCCCACAGTGCAGAGCAGGGGGATTCTGCGGTTCCTTATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 |
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| 3UTR-3UTR CAA 90 bp | CCAAGCAGCACTGAATTCCTTCTCCAGATCCTGGACAAACTGGTCATTGAGGAAGCCCGCAACAAGAAGTaGGTACCTGGTGTCAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: PSSTEFLLQILDKLVIEEARNKK*VPGVSS Trigger: GCTGCTGACACCAGGTACCAACTTCTTGTTGCGGGC...TTCCTCAATGACCAGTTTGTCCAGGATCTGGAGAAGGAATTCAGTGCTGCTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110206.2 |
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| 3UTR CCA 72 bp | TCAGGATGCTCTACAATGAATACTTTACAATTCCAGTaGCCTGAGGACAGGCACAGACAGCCTTCTACCCAG | + |
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Preference number: 3 (lower is better) Translates to: SGCSTMNTLQFQ*PEDRHRQPSTQ Trigger: CTGGGTAGAAGGCTGTCTGTGCCTGTCCTCAGGCCACTGGAATTGTAAAGTATTCATTGTAGAGCATCCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110208.8 |
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| CDS-3UTR CCA 90 bp | GCATCACCTGGGCCAGACGCCTGGCCCCTGCCAGCCAGCAGACAAGAAAAGCTGGTCAGCAGCCGGAGGTaGTCAAGGAGGAGGCGAGCC | + |
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Preference number: 4 (lower is better) Translates to: ASPGPDAWPLPASRQEKLVSSRR*SRRRRA Trigger: GGCTCGCCTCCTCCTTGACCACCTCCGGCTGCTGAC...CAGCTTTTCTTGTCTGCTGGCTGGCAGGGGCCAGGCGTCTGGCCCAGGTGATGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 |
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| CDS-3UTR GCA 90 bp | ACCTGGGCCAGACGCCTGGCCCCTGCCAGCCAGCAGACAAGAAAAGCTGTTGTGCCAAGAGCCGGAGCGTaGGCTCAGCCAGCAGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: TWARRLAPASQQTRKAVVPRAGA*AQPAAG Trigger: ACCTGCTGCTGGCTGAGCGCACGCTCCGGCTCTTGG...CACAACAGCTTTTCTTGTCTGCTGGCTGGCAGGGGCCAGGCGTCTGGCCCAGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 |
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| CDS-3UTR CCA 90 bp | ACCTGGGCCAGACGCCTGGCCCCTGCCAGCCAGCAGACAAGAAAAGCTGTTGTGGTCAGCAGCCGGAGGTaGTCAAGGAGGAGGCGAGCC | + |
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Preference number: 4 (lower is better) Translates to: TWARRLAPASQQTRKAVVVSSRR*SRRRRA Trigger: GGCTCGCCTCCTCCTTGACCACCTCCGGCTGCTGAC...CACAACAGCTTTTCTTGTCTGCTGGCTGGCAGGGGCCAGGCGTCTGGCCCAGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 |
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| CDS-3UTR TCA 90 bp | AGGCATCACCTGGGCCAGACGCCTGGCCCCTGCCAGCCAGCAGACAAGAAAAGCATGCTGCTCCAGTGCTaGCAGCTGGTGTCAGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: RHHLGQTPGPCQPADKKSMLLQC*QLVSAA Trigger: GGCTGCTGACACCAGCTGTCAGCACTGGAGCAGCAT...GCTTTTCTTGTCTGCTGGCTGGCAGGGGCCAGGCGTCTGGCCCAGGTGATGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110210.8 |
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| CDS-3UTR GCA 90 bp | CTGGGCCAGACGCCTGGCCCCTGCCAGCCAGCAGACAAGAAAAGCTGTTGTGTTCCAAGAGCCGGAGCGTaGGCTCAGCCAGCAGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: LGQTPGPCQPADKKSCCVPRAGA*AQPAAG Trigger: ACCTGCTGCTGGCTGAGCGCACGCTCCGGCTCTTGG...AACACAACAGCTTTTCTTGTCTGCTGGCTGGCAGGGGCCAGGCGTCTGGCCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 |
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| CDS-3UTR CCA 90 bp | GGCATCACCTGGGCCAGACGCCTGGCCCCTGCCAGCCAGCAGACAAGAAAAGCTGGGGCCCTCAGAGTGTaGATGAGGAAAGCGTGGACC | + |
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Preference number: 4 (lower is better) Translates to: GITWARRLAPASQQTRKAGALRV*MRKAWT Trigger: GGTCCACGCTTTCCTCATCCACACTCTGAGGGCCCC...AGCTTTTCTTGTCTGCTGGCTGGCAGGGGCCAGGCGTCTGGCCCAGGTGATGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 |
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| CDS-3UTR CCA 90 bp | CAAAATAAGGCATCACCTGGGCCAGACGCCTGGCCCCTGCCAGCCAGCAGACAAGTCAGCAGCCGGAGGTaGTCAAGGAGGAGGCGAGCC | + |
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Preference number: 4 (lower is better) Translates to: QNKASPGPDAWPLPASRQVSSRR*SRRRRA Trigger: GGCTCGCCTCCTCCTTGACCACCTCCGGCTGCTGAC...TTGTCTGCTGGCTGGCAGGGGCCAGGCGTCTGGCCCAGGTGATGCCTTATTTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 |
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| CDS-3UTR CCA 90 bp | AGCCAAGAGCCGGAGCGTGCGCTCAGCCAGCAGCAGGTTCTCATGGGTGTCCAAGGGGCCCTCAGAGTGTaGATGAGGAAAGCGTGGACC | + |
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Preference number: 4 (lower is better) Translates to: SQEPERALSQQQVLMGVQGALRV*MRKAWT Trigger: GGTCCACGCTTTCCTCATCCACACTCTGAGGGCCCC...TTGGACACCCATGAGAACCTGCTGCTGGCTGAGCGCACGCTCCGGCTCTTGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110206.2 |
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| CDS-3UTR CCA 90 bp | ATGAGCAAAGGCAGGGACCGGGGCTTGCTAGGGTACCAGCCCAGTTCTCCAGCCGGGGCCCTCAGAGTGTaGATGAGGAAAGCGTGGACC | + |
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Preference number: 4 (lower is better) Translates to: MSKGRDRGLLGYQPSSPAGALRV*MRKAWT Trigger: GGTCCACGCTTTCCTCATCCACACTCTGAGGGCCCC...GGCTGGAGAACTGGGCTGGTACCCTAGCAAGCCCCGGTCCCTGCCTTTGCTCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 |
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| CDS-3UTR TCA 90 bp | CAAAATAAGGCATCACCTGGGCCAGACGCCTGGCCCCTGCCAGCCAGCAGACAACTGCAGCCTACACAGTaGCTCCACCTGTCTGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: QNKASPGPDAWPLPASRQLQPTQ*LHLSGH Trigger: GTGGCCAGACAGGTGGAGTCACTGTGTAGGCTGCAG...TTGTCTGCTGGCTGGCAGGGGCCAGGCGTCTGGCCCAGGTGATGCCTTATTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 |
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| CDS-3UTR GCA 90 bp | AACCGCAGAATCCCCCTGCTCTGCACTGTGGGGGAGCTAGAAGCAGAACAGGCCCCAGCCGCTTGCTGCTaGAGCCTACACAGTGACTCC | + |
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Preference number: 4 (lower is better) Translates to: NRRIPLLCTVGELEAEQAPAACC*SLHSDS Trigger: GGAGTCACTGTGTAGGCTGCAGCAGCAAGCGGCTGG...GGCCTGTTCTGCTTCTAGCTCCCCCACAGTGCAGAGCAGGGGGATTCTGCGGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 |
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| CDS-3UTR CCA 90 bp | CTGATGAGCAAAGGCAGGGACCGGGGCTTGCTAGGGTACCAGCCCAGTTCTCCAGGGGCCCTCAGAGTGTaGATGAGGAAAGCGTGGACC | + |
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Preference number: 4 (lower is better) Translates to: LMSKGRDRGLLGYQPSSPGALRV*MRKAWT Trigger: GGTCCACGCTTTCCTCATCCACACTCTGAGGGCCCC...TGGAGAACTGGGCTGGTACCCTAGCAAGCCCCGGTCCCTGCCTTTGCTCATCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 |
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| CDS-3UTR CCA 90 bp | TTGCTGATGAGCAAAGGCAGGGACCGGGGCTTGCTAGGGTACCAGCCCAGTTCTGAGCAGGGAGCAGGCTaGGCAAGAGGCAGATGCCAC | + |
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Preference number: 4 (lower is better) Translates to: LLMSKGRDRGLLGYQPSSEQGAG*ARGRCH Trigger: GTGGCATCTGCCTCTTGCCCAGCCTGCTCCCTGCTC...AGAACTGGGCTGGTACCCTAGCAAGCCCCGGTCCCTGCCTTTGCTCATCAGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089506.12 |
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| CDS-3UTR CCA 90 bp | AAAATAAGGCATCACCTGGGCCAGACGCCTGGCCCCTGCCAGCCAGCAGACAAGTCCAGTGCTGACAGCTaGTGTCAGCAGCCGGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: KIRHHLGQTPGPCQPADKSSADS*CQQPEV Trigger: CACCTCCGGCTGCTGACACCAGCTGTCAGCACTGGA...CTTGTCTGCTGGCTGGCAGGGGCCAGGCGTCTGGCCCAGGTGATGCCTTATTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110210.8 |
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| CDS-3UTR TCA 90 bp | GGCATCACCTGGGCCAGACGCCTGGCCCCTGCCAGCCAGCAGACAAGAAAAGCTCCGTGGATCATCGGGTaGTTTCTCAGCACCAAAGAC | + |
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Preference number: 4 (lower is better) Translates to: GITWARRLAPASQQTRKAPWIIG*FLSTKD Trigger: GTCTTTGGTGCTGAGAAATCACCCGATGATCCACGG...AGCTTTTCTTGTCTGCTGGCTGGCAGGGGCCAGGCGTCTGGCCCAGGTGATGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 |
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| CDS-3UTR TCA 90 bp | CTTGCTGATGAGCAAAGGCAGGGACCGGGGCTTGCTAGGGTACCAGCCCAGTTCACAATTCCAGTGGCCTaGGGACAGGCACAGACAGCC | + |
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Preference number: 4 (lower is better) Translates to: LADEQRQGPGLARVPAQFTIPVA*GQAQTA Trigger: GGCTGTCTGTGCCTGTCCTCAGGCCACTGGAATTGT...GAACTGGGCTGGTACCCTAGCAAGCCCCGGTCCCTGCCTTTGCTCATCAGCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089506.12 |
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| CDS-3UTR GCA 90 bp | CCCCTGCTCTGCACTGTGGGGGAGCTAGAAGCAGAACAGGCCTTGCCGACAAAACCAGCCGCTTGCTGCTaGAGCCTACACAGTGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLLCTVGELEAEQALPTKPAACC*SLHSDS Trigger: GGAGTCACTGTGTAGGCTGCAGCAGCAAGCGGCTGG...TTTTGTCGGCAAGGCCTGTTCTGCTTCTAGCTCCCCCACAGTGCAGAGCAGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 |
||
| CDS-3UTR GCA 90 bp | CCGCAACAAGAAGTTGGTACCTGGTGTCAGCAGCCGGAGGTGGTCAAGGAGGAGCCAGCCGCTTGCTGCTaGAGCCTACACAGTGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: PQQEVGTWCQQPEVVKEEPAACC*SLHSDS Trigger: GGAGTCACTGTGTAGGCTGCAGCAGCAAGCGGCTGG...CTCCTCCTTGACCACCTCCGGCTGCTGACACCAGGTACCAACTTCTTGTTGCGG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110206.2 |
||
| CDS-3UTR GCA 90 bp | CCAGACGCCTGGCCCCTGCCAGCCAGCAGACAAGAAAAGCTGTTGTGTTCTCAGCCAGCCGCTTGCTGCTaGAGCCTACACAGTGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: PDAWPLPASRQEKLLCSQPAACC*SLHSDS Trigger: GGAGTCACTGTGTAGGCTGCAGCAGCAAGCGGCTGG...CTGAGAACACAACAGCTTTTCTTGTCTGCTGGCTGGCAGGGGCCAGGCGTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 |
||
| CDS-3UTR GCA 90 bp | TGGCCCCTGCCAGCCAGCAGACAAGAAAAGCTGTTGTGTTCTCAGCTCTCTTGGCCAAGAGCCGGAGCGTaGGCTCAGCCAGCAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WPLPASRQEKLLCSQLSWPRAGA*AQPAAG Trigger: ACCTGCTGCTGGCTGAGCGCACGCTCCGGCTCTTGG...CCAAGAGAGCTGAGAACACAACAGCTTTTCTTGTCTGCTGGCTGGCAGGGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 |
||
| CDS-3UTR GCA 90 bp | GGGCCAGACGCCTGGCCCCTGCCAGCCAGCAGACAAGAAAAGCTGTTGTGTTCTGTGAGCTCGGCAGTATaGTGCTCCAGTGCTGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: GPDAWPLPASRQEKLLCSVSSAV*CSSADS Trigger: GCTGTCAGCACTGGAGCAGCATACTGCCGAGCTCAC...AGAACACAACAGCTTTTCTTGTCTGCTGGCTGGCAGGGGCCAGGCGTCTGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110210.8 |
||
| CDS-3UTR CCA 90 bp | AACCGCAGAATCCCCCTGCTCTGCACTGTGGGGGAGCTAGAAGCAGAACAGGCCAGCAGCAGGTTCTCATaGGTGTCCAACACCAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: NRRIPLLCTVGELEAEQASSRFS*VSNTRA Trigger: CGCCCTGGTGTTGGACACCCATGAGAACCTGCTGCT...GGCCTGTTCTGCTTCTAGCTCCCCCACAGTGCAGAGCAGGGGGATTCTGCGGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 |
||
| CDS-3UTR CCA 90 bp | GAACCGCAGAATCCCCCTGCTCTGCACTGTGGGGGAGCTAGAAGCAGAACAGGCAAGCAGCTGCCCATGTaGCAGGAAGCGGGTGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: EPQNPPALHCGGARSRTGKQLPM*QEAGED Trigger: ATCCTCACCCGCTTCCTGCCACATGGGCAGCTGCTT...GCCTGTTCTGCTTCTAGCTCCCCCACAGTGCAGAGCAGGGGGATTCTGCGGTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000110208.8 |
||
| CDS-3UTR TCA 90 bp | CTTGCTGATGAGCAAAGGCAGGGACCGGGGCTTGCTAGGGTACCAGCCCAGTTCGGACACAGGTTCAGCTaGGAACTGAGGCTGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LADEQRQGPGLARVPAQFGHRFS*ELRLKV Trigger: GACCTTCAGCCTCAGTTCTCAGCTGAACCTGTGTCC...GAACTGGGCTGGTACCCTAGCAAGCCCCGGTCCCTGCCTTTGCTCATCAGCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 |
||
| CDS-3UTR TCA 90 bp | CCCCCTGCTCTGCACTGTGGGGGAGCTAGAAGCAGAACAGGCCTTGCCGACAAAGGGGCCAAGCAGCACTaGATTCCTTCTCCAGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: PPALHCGGARSRTGLADKGAKQH*IPSPDP Trigger: AGGATCTGGAGAAGGAATTCAGTGCTGCTTGGCCCC...TTTGTCGGCAAGGCCTGTTCTGCTTCTAGCTCCCCCACAGTGCAGAGCAGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 |
||
| CDS-3UTR TCA 90 bp | TTCAAAATAAGGCATCACCTGGGCCAGACGCCTGGCCCCTGCCAGCCAGCAGACGGGGCCAAGCAGCACTaGATTCCTTCTCCAGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: FKIRHHLGQTPGPCQPADGAKQH*IPSPDP Trigger: AGGATCTGGAGAAGGAATTCAGTGCTGCTTGGCCCC...GTCTGCTGGCTGGCAGGGGCCAGGCGTCTGGCCCAGGTGATGCCTTATTTTGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 |
||
| CDS-3UTR CCA 90 bp | CAGACGCCTGGCCCCTGCCAGCCAGCAGACAAGAAAAGCTGTTGTGTTCTCAGCAGCAGCAGGTTCTCATaGGTGTCCAACACCAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: QTPGPCQPADKKSCCVLSSSRFS*VSNTRA Trigger: CGCCCTGGTGTTGGACACCCATGAGAACCTGCTGCT...GCTGAGAACACAACAGCTTTTCTTGTCTGCTGGCTGGCAGGGGCCAGGCGTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 |
||
| CDS-3UTR CCA 90 bp | GCACATAAGGAACCGCAGAATCCCCCTGCTCTGCACTGTGGGGGAGCTAGAAGCAGCAGCAGGTTCTCATaGGTGTCCAACACCAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: AHKEPQNPPALHCGGARSSSRFS*VSNTRA Trigger: CGCCCTGGTGTTGGACACCCATGAGAACCTGCTGCT...GCTTCTAGCTCCCCCACAGTGCAGAGCAGGGGGATTCTGCGGTTCCTTATGTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 |
||
| CDS-3UTR CCA 90 bp | GGAGCGTGCGCTCAGCCAGCAGCAGGTTCTCATGGGTGTCCAACACCAGGGCGACACAGTGACTCCACCTaGCCACTGCCAAAATCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GACAQPAAGSHGCPTPGRHSDST*PLPKSV Trigger: AACAGATTTTGGCAGTGGCCAGGTGGAGTCACTGTG...TCGCCCTGGTGTTGGACACCCATGAGAACCTGCTGCTGGCTGAGCGCACGCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110206.2 |
||
| CDS-3UTR TCA 90 bp | CCCCCTGCTCTGCACTGTGGGGGAGCTAGAAGCAGAACAGGCCTTGCCGACAAACCGTGGATCATCGGGTaGTTTCTCAGCACCAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PPALHCGGARSRTGLADKPWIIG*FLSTKD Trigger: GTCTTTGGTGCTGAGAAATCACCCGATGATCCACGG...TTTGTCGGCAAGGCCTGTTCTGCTTCTAGCTCCCCCACAGTGCAGAGCAGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 |
||
| CDS-3UTR TCA 90 bp | CCCGCAACAAGAAGTTGGTACCTGGTGTCAGCAGCCGGAGGTGGTCAAGGAGGAGGACACAGGTTCAGCTaGGAACTGAGGCTGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PATRSWYLVSAAGGGQGGGHRFS*ELRLKV Trigger: GACCTTCAGCCTCAGTTCTCAGCTGAACCTGTGTCC...TCCTCCTTGACCACCTCCGGCTGCTGACACCAGGTACCAACTTCTTGTTGCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110206.2 |
||
| CDS-3UTR TCA 90 bp | GCACATAAGGAACCGCAGAATCCCCCTGCTCTGCACTGTGGGGGAGCTAGAAGCGGACACAGGTTCAGCTaGGAACTGAGGCTGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: AHKEPQNPPALHCGGARSGHRFS*ELRLKV Trigger: GACCTTCAGCCTCAGTTCTCAGCTGAACCTGTGTCC...GCTTCTAGCTCCCCCACAGTGCAGAGCAGGGGGATTCTGCGGTTCCTTATGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 |
||
| CDS-3UTR TCA 90 bp | CATAAGGAACCGCAGAATCCCCCTGCTCTGCACTGTGGGGGAGCTAGAAGCAGAGTGGCAGGAAGCGGGTaGGGATTCCCTCAATACGGT | + |
|
Preference number: 4 (lower is better) Translates to: HKEPQNPPALHCGGARSRVAGSG*GFPQYG Trigger: ACCGTATTGAGGGAATCCTCACCCGCTTCCTGCCAC...TCTGCTTCTAGCTCCCCCACAGTGCAGAGCAGGGGGATTCTGCGGTTCCTTATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000110208.8 |
||
| CDS-3UTR GCA 90 bp | TTCCAGTGGCCTGAGGACAGGCACAGACAGCCTTCTACCCAGGTCCCTTCCTTCTTGAGGAAAAGCAGCTaGCCATGTGGCAGGAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: FQWPEDRHRQPSTQVPSFLRKSS*PCGRKR Trigger: CCGCTTCCTGCCACATGGGCAGCTGCTTTTCCTCAA...GAAGGAAGGGACCTGGGTAGAAGGCTGTCTGTGCCTGTCCTCAGGCCACTGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110208.8 |
||
| CDS-3UTR CCA 90 bp | CAGACGCCTGGCCCCTGCCAGCCAGCAGACAAGAAAAGCTGTTGTGTTCTCAGCGAGGCTGAAGGTCTGTaGAGGAACATCCAGCCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QTPGPCQPADKKSCCVLSEAEGL*RNIQPL Trigger: AAGCGGCTGGATGTTCCTCCACAGACCTTCAGCCTC...GCTGAGAACACAACAGCTTTTCTTGTCTGCTGGCTGGCAGGGGCCAGGCGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 |
||
| 3UTR CAA 72 bp | AAATCCTTGCTGATGAGCAAAGGCAGGGACCGGGGCTaGCTAGGGTACCAGCCCAGTTCTCCAGCCGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KSLLMSKGRDRG*LGYQPSSPAVK Trigger: CTTCACGGCTGGAGAACTGGGCTGGTACCCTAGCAAGCCCCGGTCCCTGCCTTTGCTCATCAGCAAGGATTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 |
||
| CDS-3UTR TCA 90 bp | AGACGCCTGGCCCCTGCCAGCCAGCAGACAAGAAAAGCTGTTGTGTTCTCAGCTGGACACAGGTTCAGCTaGGAACTGAGGCTGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RRLAPASQQTRKAVVFSAGHRFS*ELRLKV Trigger: GACCTTCAGCCTCAGTTCTCAGCTGAACCTGTGTCC...AGCTGAGAACACAACAGCTTTTCTTGTCTGCTGGCTGGCAGGGGCCAGGCGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 |
||
| CDS-3UTR GCA 90 bp | TCACCTGGGCCAGACGCCTGGCCCCTGCCAGCCAGCAGACAAGAAAAGCTGTTGCCAAAATCTGTTCCTTaGGGAAGAGCCTGTCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SPGPDAWPLPASRQEKLLPKSVP*GRACPF Trigger: AAAGGGACAGGCTCTTCCGCAAGGAACAGATTTTGG...CAACAGCTTTTCTTGTCTGCTGGCTGGCAGGGGCCAGGCGTCTGGCCCAGGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 |
||
| CDS-3UTR GCA 90 bp | AAAATAAGGCATCACCTGGGCCAGACGCCTGGCCCCTGCCAGCCAGCAGACAAGCTTCCCCTAGCAGTATaGAACCTTTACCCTCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KIRHHLGQTPGPCQPADKLPLAV*NLYPRS Trigger: AGAGCGAGGGTAAAGGTTGCATACTGCTAGGGGAAG...CTTGTCTGCTGGCTGGCAGGGGCCAGGCGTCTGGCCCAGGTGATGCCTTATTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089506.12 |
||
| CDS-3UTR CCA 90 bp | CCGACAAAATCCTTGCTGATGAGCAAAGGCAGGGACCGGGGCTTGCTAGGGTACCAAGAAGTTGGTACCTaGTGTCAGCAGCCGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PTKSLLMSKGRDRGLLGYQEVGT*CQQPEV Trigger: CACCTCCGGCTGCTGACACCAGGTACCAACTTCTTG...GTACCCTAGCAAGCCCCGGTCCCTGCCTTTGCTCATCAGCAAGGATTTTGTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110208.8 |
||
| 3UTR CAA 72 bp | AGGATTCCCTCAATACGGTCAGCCCGCAACAAGAAGTaGGTACCTGGTGTCAGCAGCCGGAGGTGGTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RIPSIRSARNKK*VPGVSSRRWSR Trigger: CCTTGACCACCTCCGGCTGCTGACACCAGGTACCAACTTCTTGTTGCGGGCTGACCGTATTGAGGGAATCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110206.2 |
||
| CDS-3UTR TCA 90 bp | TCCCTCAATACGGTCAGCCCGCAACAAGAAGTTGGTACCTGGTGTCAGCAGCCGCCGTGGATCATCGGGTaGTTTCTCAGCACCAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SLNTVSPQQEVGTWCQQPPWIIG*FLSTKD Trigger: GTCTTTGGTGCTGAGAAATCACCCGATGATCCACGG...CGGCTGCTGACACCAGGTACCAACTTCTTGTTGCGGGCTGACCGTATTGAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110206.2 |
||
| CDS-3UTR GCA 90 bp | ATAAGGCATCACCTGGGCCAGACGCCTGGCCCCTGCCAGCCAGCAGACAAGAAACCAAAATCTGTTCCTTaGGGAAGAGCCTGTCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IRHHLGQTPGPCQPADKKPKSVP*GRACPF Trigger: AAAGGGACAGGCTCTTCCGCAAGGAACAGATTTTGG...TTTCTTGTCTGCTGGCTGGCAGGGGCCAGGCGTCTGGCCCAGGTGATGCCTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 |
||
| CDS-3UTR GCA 90 bp | AGCTGTTGTGTTCTCAGCTCTCTTGGCAGACACGGGGGCATGGCACATAAGGAAAGCTCGGCAGTATGCTaGTCCAGTGCTGACAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SCCVLSSLGRHGGMAHKESSAVC*SSADSW Trigger: CCAGCTGTCAGCACTGGAGCAGCATACTGCCGAGCT...TTCCTTATGTGCCATGCCCCCGTGTCTGCCAAGAGAGCTGAGAACACAACAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110210.8 |
||
| CDS-3UTR CCA 90 bp | CTTGCTGATGAGCAAAGGCAGGGACCGGGGCTTGCTAGGGTACCAGCCCAGTTCTCCTTCTCCAGATCCTaGACAAACTGGTCATTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LADEQRQGPGLARVPAQFSFSRS*TNWSLR Trigger: CCTCAATGACCAGTTTGTCCAGGATCTGGAGAAGGA...GAACTGGGCTGGTACCCTAGCAAGCCCCGGTCCCTGCCTTTGCTCATCAGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110208.8 |
||
| CDS-3UTR TCA 90 bp | TGGCCCCTGCCAGCCAGCAGACAAGAAAAGCTGTTGTGTTCTCAGCTCTCTTGGCCGTGGATCATCGGGTaGTTTCTCAGCACCAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: WPLPASRQEKLLCSQLSWPWIIG*FLSTKD Trigger: GTCTTTGGTGCTGAGAAATCACCCGATGATCCACGG...CCAAGAGAGCTGAGAACACAACAGCTTTTCTTGTCTGCTGGCTGGCAGGGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 |
||
| CDS-3UTR GCA 90 bp | GACAAAATCCTTGCTGATGAGCAAAGGCAGGGACCGGGGCTTGCTAGGGTACCACACCTGTCTGGCCACTaGCAAAATCTGTTCCTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: DKILADEQRQGPGLARVPHLSGH*QNLFLA Trigger: CGCAAGGAACAGATTTTGGCAGTGGCCAGACAGGTG...TGGTACCCTAGCAAGCCCCGGTCCCTGCCTTTGCTCATCAGCAAGGATTTTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 |
||
| 3UTR CAA 72 bp | CAGCAGACAAGAAAAGCTGTTGTGTTCTCAGCTCTCTaGGCAGACACGGGGGCATGGCACATAAGGAACCGC | + |
|
Preference number: 4 (lower is better) Translates to: QQTRKAVVFSAL*ADTGAWHIRNR Trigger: GCGGTTCCTTATGTGCCATGCCCCCGTGTCTGCCAAGAGAGCTGAGAACACAACAGCTTTTCTTGTCTGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 |
||
| 3UTR CAA 72 bp | CTGAATTCCTTCTCCAGATCCTGGACAAACTGGTCATaGAGGAAAAGCAGCTGCCCATGTGGCAGGAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LNSFSRSWTNWS*RKSSCPCGRKR Trigger: CCGCTTCCTGCCACATGGGCAGCTGCTTTTCCTCAATGACCAGTTTGTCCAGGATCTGGAGAAGGAATTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110206.2 |
||
| CDS-3UTR GCA 90 bp | TGGCCCCTGCCAGCCAGCAGACAAGAAAAGCTGTTGTGTTCTCAGCTCTCTTGGCCAAAATCTGTTCCTTaGGGAAGAGCCTGTCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: WPLPASRQEKLLCSQLSWPKSVP*GRACPF Trigger: AAAGGGACAGGCTCTTCCGCAAGGAACAGATTTTGG...CCAAGAGAGCTGAGAACACAACAGCTTTTCTTGTCTGCTGGCTGGCAGGGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 |
||
| CDS-3UTR TCA 90 bp | AACCGCAGAATCCCCCTGCTCTGCACTGTGGGGGAGCTAGAAGCAGAACAGGCCCAGGATGCTCTACAATaGATACTTTACAATTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NRRIPLLCTVGELEAEQAQDALQ*ILYNSS Trigger: ACTGGAATTGTAAAGTATTCATTGTAGAGCATCCTG...GGCCTGTTCTGCTTCTAGCTCCCCCACAGTGCAGAGCAGGGGGATTCTGCGGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000089506.12 |
||
| CDS-3UTR GCA 90 bp | AGGAAGCGGGTGAGGATTCCCTCAATACGGTCAGCCCGCAACAAGAAGTTGGTACCAAAATCTGTTCCTTaGGGAAGAGCCTGTCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RKRVRIPSIRSARNKKLVPKSVP*GRACPF Trigger: AAAGGGACAGGCTCTTCCGCAAGGAACAGATTTTGG...TACCAACTTCTTGTTGCGGGCTGACCGTATTGAGGGAATCCTCACCCGCTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110206.2 |
||
| CDS-3UTR GCA 90 bp | AGCTGTTGTGTTCTCAGCTCTCTTGGCAGACACGGGGGCATGGCACATAAGGAAGTTCCAGCTTCAGGATaGTCTACAATGAATACTTTA | + |
|
Preference number: 4 (lower is better) Translates to: SCCVLSSLGRHGGMAHKEVPASG*STMNTL Trigger: TAAAGTATTCATTGTAGAGCATCCTGAAGCTGGAAC...TTCCTTATGTGCCATGCCCCCGTGTCTGCCAAGAGAGCTGAGAACACAACAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089506.12 |
||
| CDS CCA 90 bp | TCGACTAGGGTGAGCTCGGCAGTATGCTGCTCCAGTGCTGACAGCTaGTGTCAGCAGCCGGAGGTGGTCAAGGAGGAGGCGAGCCAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: STRVSSAVCCSSADS*CQQPEVVKEEASQE Trigger: CTCTTGGCTCGCCTCCTCCTTGACCACCTCCGGCTGCTGACACCAGCTGTCAGCACTGGAGCAGCATACTGCCGAGCTCACCCTAGTCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110210.8 |
||
| CDS CCA 90 bp | CGAGCCAAGAGCCGGAGCGTGCGCTCAGCCAGCAGCAGGTTCTCATaGGTGTCCAACACCAGGGCGAAACCTAAGGAGAGTATACCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RAKSRSVRSASSRFS*VSNTRAKPKESIPS Trigger: GCTGGGTATACTCTCCTTAGGTTTCGCCCTGGTGTTGGACACCCATGAGAACCTGCTGCTGGCTGAGCGCACGCTCCGGCTCTTGGCTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 ENSMUST00000153097.3 |
||
| CDS GCA 90 bp | GAGCAGGCTGGGCAAGAGGCAGATGCCACACTTCCCCTAGCAGTATaGAACCTTTACCCTCGCTCTTTGTCTGGTGAGGGGTCAGCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: EQAGQEADATLPLAV*NLYPRSLSGEGSAG Trigger: CCCCGCTGACCCCTCACCAGACAAAGAGCGAGGGTAAAGGTTGCATACTGCTAGGGGAAGTGTGGCATCTGCCTCTTGCCCAGCCTGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089506.12 |
||
| CDS-3UTR CAA 90 bp | TTCAAAATAAGGCATCACCTGGGCCAGACGCCTGGCCCCTGCCAGCCAGCAGACGCCCGCAACAAGAAGTaGGTACCTGGTGTCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FKIRHHLGQTPGPCQPADARNKK*VPGVSS Trigger: GCTGCTGACACCAGGTACCAACTTCTTGTTGCGGGC...GTCTGCTGGCTGGCAGGGGCCAGGCGTCTGGCCCAGGTGATGCCTTATTTTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110208.8 |
||
| CDS-3UTR CAA 90 bp | CTGGGCCAGACGCCTGGCCCCTGCCAGCCAGCAGACAAGAAAAGCTGTTGTGTTGCCAAAATCTGTTCCTaGCGGAAGAGCCTGTCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LGQTPGPCQPADKKSCCVAKICS*RKSLSL Trigger: AAGGGACAGGCTCTTCCGCAAGGAACAGATTTTGGC...AACACAACAGCTTTTCTTGTCTGCTGGCTGGCAGGGGCCAGGCGTCTGGCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 |
||
| CDS CCA 90 bp | CATGCAGGGACACAGGTTCAGCTGAGAACTGAGGCTGAAGGTCTGTaGAGGAACATCCAGCCGCTTGCTGCTGCAGCCTACACAGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: HAGTQVQLRTEAEGL*RNIQPLAAAAYTVT Trigger: AGTCACTGTGTAGGCTGCAGCAGCAAGCGGCTGGATGTTCCTCCACAGACCTTCAGCCTCAGTTCTCAGCTGAACCTGTGTCCCTGCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000089506.12 ENSMUST00000110206.2 ENSMUST00000110208.8 ENSMUST00000110210.8 ENSMUST00000153097.3 |
||
| CDS CCA 90 bp | CGGGGCCAAGCAGCACTGAATTCCTTCTCCAGATCCTGGACAAACTaGTCATTGAGGAAAAGCAGCTGCCCATGTGGCAGGAAGCGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RGQAALNSFSRSWTN*SLRKSSCPCGRKRV Trigger: CACCCGCTTCCTGCCACATGGGCAGCTGCTTTTCCTCAATGACCAGTTTGTCCAGGATCTGGAGAAGGAATTCAGTGCTGCTTGGCCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110208.8 |
||
| CDS-3UTR CAA 90 bp | CAGACGCCTGGCCCCTGCCAGCCAGCAGACAAGAAAAGCTGTTGTGTTCTCAGCGCCAAAATCTGTTCCTaGCGGAAGAGCCTGTCCCTT | + |
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Preference number: 5 (lower is better) Translates to: QTPGPCQPADKKSCCVLSAKICS*RKSLSL Trigger: AAGGGACAGGCTCTTCCGCAAGGAACAGATTTTGGC...GCTGAGAACACAACAGCTTTTCTTGTCTGCTGGCTGGCAGGGGCCAGGCGTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 |
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| CDS-3UTR CAA 90 bp | AACCGCAGAATCCCCCTGCTCTGCACTGTGGGGGAGCTAGAAGCAGAACAGGCCTGGACAAACTGGTCATaGAGGAAAAGCAGCTGCCCA | + |
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Preference number: 5 (lower is better) Translates to: NRRIPLLCTVGELEAEQAWTNWS*RKSSCP Trigger: TGGGCAGCTGCTTTTCCTCAATGACCAGTTTGTCCA...GGCCTGTTCTGCTTCTAGCTCCCCCACAGTGCAGAGCAGGGGGATTCTGCGGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000110208.8 |
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| CDS-3UTR CAA 90 bp | CCTCAATACGGTCAGCCCGCAACAAGAAGTTGGTACCTGGTGTCAGCAGCCGGAGCCAAAATCTGTTCCTaGCGGAAGAGCCTGTCCCTT | + |
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Preference number: 5 (lower is better) Translates to: PQYGQPATRSWYLVSAAGAKICS*RKSLSL Trigger: AAGGGACAGGCTCTTCCGCAAGGAACAGATTTTGGC...TCCGGCTGCTGACACCAGGTACCAACTTCTTGTTGCGGGCTGACCGTATTGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110206.2 |
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| CDS GCA 90 bp | AGCCTACACAGTGACTCCACCTGGCCACTGCCAAAATCTGTTCCTTaGGGAAGAGCCTGTCCCTTTCTGCACCATGTGACCGTGGATCAT | + |
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Preference number: 5 (lower is better) Translates to: SLHSDSTWPLPKSVP*GRACPFLHHVTVDH Trigger: ATGATCCACGGTCACATGGTGCAGAAAGGGACAGGCTCTTCCGCAAGGAACAGATTTTGGCAGTGGCCAGGTGGAGTCACTGTGTAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110206.2 |
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| CDS GCA 90 bp | TACACAGTGACTCCACCTGTCTGGCCACTGCCAAAATCTGTTCCTTaGGGAAGAGCCTGTCCCTTTCTGCACCATGTGACCGTGGATCAT | + |
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Preference number: 5 (lower is better) Translates to: YTVTPPVWPLPKSVP*GRACPFLHHVTVDH Trigger: ATGATCCACGGTCACATGGTGCAGAAAGGGACAGGCTCTTCCGCAAGGAACAGATTTTGGCAGTGGCCAGACAGGTGGAGTCACTGTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 |
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| CDS-3UTR CAA 90 bp | AGCTGTTGTGTTCTCAGCTCTCTTGGCAGACACGGGGGCATGGCACATAAGGAAGCCAAAATCTGTTCCTaGCGGAAGAGCCTGTCCCTT | + |
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Preference number: 5 (lower is better) Translates to: SCCVLSSLGRHGGMAHKEAKICS*RKSLSL Trigger: AAGGGACAGGCTCTTCCGCAAGGAACAGATTTTGGC...TTCCTTATGTGCCATGCCCCCGTGTCTGCCAAGAGAGCTGAGAACACAACAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 |
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| CDS TCA 72 bp | TGGAAAGGGTCCCCGGCTGCCAGGTGGAAGGCTCCATaGGGGGCCTCATGCAGGGACACAGGTTCAGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: WKGSPAARWKAP*GASCRDTGSAE Trigger: CTCAGCTGAACCTGTGTCCCTGCATGAGGCCCCTCATGGAGCCTTCCACCTGGCAGCCGGGGACCCTTTCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000089506.12 ENSMUST00000110206.2 ENSMUST00000110208.8 ENSMUST00000110210.8 ENSMUST00000153097.3 |
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| CDS CCA 72 bp | GAGAGTATACCCAGCCATAGCACTGTCCGAGGCTCCTaGAAAGGGTCCCCGGCTGCCAGGTGGAAGGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: ESIPSHSTVRGS*KGSPAARWKAP Trigger: TGGAGCCTTCCACCTGGCAGCCGGGGACCCTTTCCAGGAGCCTCGGACAGTGCTATGGCTGGGTATACTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000089506.12 ENSMUST00000110206.2 ENSMUST00000110208.8 ENSMUST00000110210.8 ENSMUST00000153097.3 |
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| CDS CCA 72 bp | AGCCGGAGCGTGCGCTCAGCCAGCAGCAGGTTCTCATaGGTGTCCAACACCAGGGCGAAACCTAAGGAGAGT | + |
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Preference number: 6 (lower is better) Translates to: SRSVRSASSRFS*VSNTRAKPKES Trigger: ACTCTCCTTAGGTTTCGCCCTGGTGTTGGACACCCATGAGAACCTGCTGCTGGCTGAGCGCACGCTCCGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 ENSMUST00000153097.3 |
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| CDS CCA 72 bp | CGGGGCCAAGCAGCACTGAATTCCTTCTCCAGATCCTaGACAAACTGGTGTCAGCAGCCGGAGGTGGTCAAG | + |
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Preference number: 6 (lower is better) Translates to: RGQAALNSFSRS*TNWCQQPEVVK Trigger: CTTGACCACCTCCGGCTGCTGACACCAGTTTGTCCAGGATCTGGAGAAGGAATTCAGTGCTGCTTGGCCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089506.12 |
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| CDS TCA 72 bp | GGAACATCCAGCCGCTTGCTGCTGCAGCCTACACAGTaGCTCCACCTGTCTGGCCACTGCCAAAATCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: GTSSRLLLQPTQ*LHLSGHCQNLF Trigger: GAACAGATTTTGGCAGTGGCCAGACAGGTGGAGTCACTGTGTAGGCTGCAGCAGCAAGCGGCTGGATGTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 |
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| CDS CCA 72 bp | ACACAGGTTCAGCTGAGAACTGAGGCTGAAGGTCTGTaGAGGAACATCCAGCCGCTTGCTGCTGCAGCCTAC | + |
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Preference number: 6 (lower is better) Translates to: TQVQLRTEAEGL*RNIQPLAAAAY Trigger: GTAGGCTGCAGCAGCAAGCGGCTGGATGTTCCTCCACAGACCTTCAGCCTCAGTTCTCAGCTGAACCTGTGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000089506.12 ENSMUST00000110206.2 ENSMUST00000110208.8 ENSMUST00000110210.8 ENSMUST00000153097.3 |
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| CDS GCA 72 bp | ACTCCACCTGTCTGGCCACTGCCAAAATCTGTTCCTTaGGGAAGAGCCTGTCCCTTTCTGCACCATGTGACC | + |
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Preference number: 6 (lower is better) Translates to: TPPVWPLPKSVP*GRACPFLHHVT Trigger: GGTCACATGGTGCAGAAAGGGACAGGCTCTTCCGCAAGGAACAGATTTTGGCAGTGGCCAGACAGGTGGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 |
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| CDS CAA 90 bp | CTACACAGTGACTCCACCTGTCTGGCCACTGCCAAAATCTGTTCCTaGCGGAAGAGCCTGTCCCTTTCTGCACCATGTGACCGTGGATCA | + |
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Preference number: 6 (lower is better) Translates to: LHSDSTCLATAKICS*RKSLSLSAPCDRGS Trigger: TGATCCACGGTCACATGGTGCAGAAAGGGACAGGCTCTTCCGCAAGGAACAGATTTTGGCAGTGGCCAGACAGGTGGAGTCACTGTGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089506.12 ENSMUST00000110208.8 ENSMUST00000110210.8 |
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| CDS CCA 72 bp | CGGGGCCAAGCAGCACTGAATTCCTTCTCCAGATCCTaGACAAACTGGTCATTGAGGAAAAGCAGCTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: RGQAALNSFSRS*TNWSLRKSSCP Trigger: TGGGCAGCTGCTTTTCCTCAATGACCAGTTTGTCCAGGATCTGGAGAAGGAATTCAGTGCTGCTTGGCCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110208.8 |
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