RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANKRD52 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000014498

Ensembl transcript IDs: ENSMUST00000014642.10, ENSMUST00000166577.2

Found 299 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAGATTCGGACAAACACCCCGGGCTTCTGGGACCAGCATGAGGTATaGTGCAGGGTATCTGTCGGGAGGAAGGGCTCCCTGGGACGGCCC +
Preference number: 1 (lower is better)
Translates to: KIRTNTPGFWDQHEV*CRVSVGRKGSLGRP
Trigger: GGGCCGTCCCAGGGAGCCCTTCCTCCCGACAGATACCCTGCACCATACCTCATGCTGGTCCCAGAAGCCCGGGGTGTTTGTCCGAATCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR TCA 90 bp GGGCAGGGGACTGAACTGAGCCACAGTGTCAGTCTGTCGCTCCCTTaGCCAGTGATCCCCCTCCCACGGAGGAAAGCCTGCTTCCCTAAC +
Preference number: 1 (lower is better)
Translates to: GQGTELSHSVSLSLP*PVIPLPRRKACFPN
Trigger: GTTAGGGAAGCAGGCTTTCCTCCGTGGGAGGGGGATCACTGGTCAAGGGAGCGACAGACTGACACTGTGGCTCAGTTCAGTCCCCTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR CCA 90 bp GTGTCTTGGCCCCTGGCTGAGGTATTGCGTGTGAGGAAGGGACACTaGGTTACGGGATTGGGTCCAACCGTGCAGAGGCTCACCAAGGAG +
Preference number: 1 (lower is better)
Translates to: VSWPLAEVLRVRKGH*VTGLGPTVQRLTKE
Trigger: CTCCTTGGTGAGCCTCTGCACGGTTGGACCCAATCCCGTAACCCAGTGTCCCTTCCTCACACGCAATACCTCAGCCAGGGGCCAAGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR TCA 90 bp GGAGGGGCAGGACCTCTATTCAAGTTCTGTGTCTTGGCCCCTGGCTaGGGTATTGCGTGTGAGGAAGGGACACTGGGTTACGGGATTGGG +
Preference number: 1 (lower is better)
Translates to: GGAGPLFKFCVLAPG*GIACEEGTLGYGIG
Trigger: CCCAATCCCGTAACCCAGTGTCCCTTCCTCACACGCAATACCTCAGCCAGGGGCCAAGACACAGAACTTGAATAGAGGTCCTGCCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR GCA 90 bp CTCCCACGGAGGAAAGCCTGCTTCCCTAACAGGAGGTCCCCACACTaGCCCTGCCCTTCCTACCATCTTTGGCTTCATATCAGGAGTGAC +
Preference number: 1 (lower is better)
Translates to: LPRRKACFPNRRSPH*PCPSYHLWLHIRSD
Trigger: GTCACTCCTGATATGAAGCCAAAGATGGTAGGAAGGGCAGGGGCAGTGTGGGGACCTCCTGTTAGGGAAGCAGGCTTTCCTCCGTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR CCA 90 bp GGGTTACGGGATTGGGTCCAACCGTGCAGAGGCTCACCAAGGAGATaGACAGGGCATCTGAAGGGACCAGGGCCAGATGCAATGCTACAT +
Preference number: 1 (lower is better)
Translates to: GLRDWVQPCRGSPRR*TGHLKGPGPDAMLH
Trigger: ATGTAGCATTGCATCTGGCCCTGGTCCCTTCAGATGCCCTGTCCATCTCCTTGGTGAGCCTCTGCACGGTTGGACCCAATCCCGTAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR TCA 90 bp GCAGAGTCTACTCAACCATCTCTCCATGCTGGGAGGGCAGGGGACTaGACTGAGCCACAGTGTCAGTCTGTCGCTCCCTTGACCAGTGAT +
Preference number: 1 (lower is better)
Translates to: AESTQPSLHAGRAGD*TEPQCQSVAPLTSD
Trigger: ATCACTGGTCAAGGGAGCGACAGACTGACACTGTGGCTCAGTTCAGTCCCCTGCCCTCCCAGCATGGAGAGATGGTTGAGTAGACTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR GCA 90 bp GTGTGGCAAAGGGTAAACAGCTGCTCCCCAGTGCATCCTCCCCTCTaGCCCACCACCCAGTCGTGTTCTCCTTTAAAGTGCCCTAAATGT +
Preference number: 1 (lower is better)
Translates to: VWQRVNSCSPVHPPL*PTTQSCSPLKCPKC
Trigger: ACATTTAGGGCACTTTAAAGGAGAACACGACTGGGTGGTGGGGCAGAGGGGAGGATGCACTGGGGAGCAGCTGTTTACCCTTTGCCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR GCA 90 bp CTCACCAAGGAGATGGACAGGGCATCTGAAGGGACCAGGGCCAGATaGAATGCTACATTTGAAGAGAACACTGCCCTCCCCATTCCAGCC +
Preference number: 1 (lower is better)
Translates to: LTKEMDRASEGTRAR*NATFEENTALPIPA
Trigger: GGCTGGAATGGGGAGGGCAGTGTTCTCTTCAAATGTAGCATTGCATCTGGCCCTGGTCCCTTCAGATGCCCTGTCCATCTCCTTGGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR CCA 90 bp CCCTGTCTCCTATGTAGCCCTCGCTCTGTCTCCTTTGCTGGGACCTaGGGCTGTCCCCAGGGTCCTCATGTAAATAGGCCTTTTCACAAA +
Preference number: 1 (lower is better)
Translates to: PCLLCSPRSVSFAGT*GCPQGPHVNRPFHK
Trigger: TTTGTGAAAAGGCCTATTTACATGAGGACCCTGGGGACAGCCCCAGGTCCCAGCAAAGGAGACAGAGCGAGGGCTACATAGGAGACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR TCA 90 bp TCTATTCAAGTTCTGTGTCTTGGCCCCTGGCTGAGGTATTGCGTGTaGGGAAGGGACACTGGGTTACGGGATTGGGTCCAACCGTGCAGA +
Preference number: 1 (lower is better)
Translates to: SIQVLCLGPWLRYCV*GRDTGLRDWVQPCR
Trigger: TCTGCACGGTTGGACCCAATCCCGTAACCCAGTGTCCCTTCCTCACACGCAATACCTCAGCCAGGGGCCAAGACACAGAACTTGAATAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR GCA 90 bp TCCAGCCCAGTTTGGCTTCTCGGGTACATTCCAGAACCTTATCAGTaGAGAGTCTACTCAACCATCTCTCCATGCTGGGAGGGCAGGGGA +
Preference number: 1 (lower is better)
Translates to: SSPVWLLGYIPEPYQ*RVYSTISPCWEGRG
Trigger: TCCCCTGCCCTCCCAGCATGGAGAGATGGTTGAGTAGACTCTGCACTGATAAGGTTCTGGAATGTACCCGAGAAGCCAAACTGGGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR TCA 90 bp ACACTGCCCCTGCCCTTCCTACCATCTTTGGCTTCATATCAGGAGTaGCTGGGGCAGTGGGTACTCTCAGACATGACAGAAGGTAGAGAC +
Preference number: 1 (lower is better)
Translates to: TLPLPFLPSLASYQE*LGQWVLSDMTEGRD
Trigger: GTCTCTACCTTCTGTCATGTCTGAGAGTACCCACTGCCCCAGTCACTCCTGATATGAAGCCAAAGATGGTAGGAAGGGCAGGGGCAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR TCA 90 bp CTTAAGAGAGGTCACATTGATTGTCGTATAGGGAAGGAGAGGTTATaGAGGGGTGTAGGCAAGAGGGGCATTGCAAGGCCCTTTGGCTTT +
Preference number: 1 (lower is better)
Translates to: LKRGHIDCRIGKERL*RGVGKRGIARPFGF
Trigger: AAAGCCAAAGGGCCTTGCAATGCCCCTCTTGCCTACACCCCTTCATAACCTCTCCTTCCCTATACGACAATCAATGTGACCTCTCTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR TCA 90 bp CTCACCAATAATGGTCATTTGGAAGCCTTGAAATGGTTTAGGATCTaGGGGTTGGGGGCAGCAAGACACAAAGATAACAGGGACCATGAA +
Preference number: 1 (lower is better)
Translates to: LTNNGHLEALKWFRI*GLGAARHKDNRDHE
Trigger: TTCATGGTCCCTGTTATCTTTGTGTCTTGCTGCCCCCAACCCTCAGATCCTAAACCATTTCAAGGCTTCCAAATGACCATTATTGGTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR GCA 90 bp CAGGAGGAAGAACATGGTCCCTACCTCCAATCACATGCAAACACATaGCTGAAACACAGGACATATACTAGGGCTGTAGTTTTGAAATGG +
Preference number: 1 (lower is better)
Translates to: QEEEHGPYLQSHANT*LKHRTYTRAVVLKW
Trigger: CCATTTCAAAACTACAGCCCTAGTATATGTCCTGTGTTTCAGGCATGTGTTTGCATGTGATTGGAGGTAGGGACCATGTTCTTCCTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR-3UTR GCA 90 bp GAGCCACAGTGTCAGTCTGTCGCTCCCTTGACCAGTGATCCCCCTCCCACGGAGGGAAGAGGAGGGGTCTaGCTGGCAGCAGAGGAGAGG +
Preference number: 2 (lower is better)
Translates to: EPQCQSVAPLTSDPPPTEGRGGV*LAAEER
Trigger: CCTCTCCTCTGCTGCCAGGCAGACCCCTCCTCTTCC...CTCCGTGGGAGGGGGATCACTGGTCAAGGGAGCGACAGACTGACACTGTGGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR-3UTR GCA 90 bp CAGGGGGCCACGGGTGGGGGAGGTAGCCCGTCAATCTCAGAGTCTCAGTTGGACTCGCTCTGTCTCCTTTaGTGGGACCTGGGGCTGTCC +
Preference number: 2 (lower is better)
Translates to: QGATGGGGSPSISESQLDSLCLL*WDLGLS
Trigger: GGACAGCCCCAGGTCCCAGCAAAGGAGACAGAGCGA...GTCCAACTGAGACTCTGAGATTGACGGGCTACCTCCCCCACCCGTGGCCCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR CAA 90 bp GGGGCCACGGGTGGGGGAGGTAGCCCGTCAATCTCAGAGTCTCAGTaGGACAGTGGCAGTGACTCGGGTCTGTTGGTCCATTCTGGGACC +
Preference number: 2 (lower is better)
Translates to: GATGGGGSPSISESQ*DSGSDSGLLVHSGT
Trigger: GGTCCCAGAATGGACCAACAGACCCGAGTCACTGCCACTGTCCAACTGAGACTCTGAGATTGACGGGCTACCTCCCCCACCCGTGGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR-3UTR CCA 90 bp CAGGGGGCCACGGGTGGGGGAGGTAGCCCGTCAATCTCAGAGTCTCAGTTGGACATGCCCCAGTCATCCTaGGGAAAGCTTCCCTGCTCC +
Preference number: 2 (lower is better)
Translates to: QGATGGGGSPSISESQLDMPQSS*GKLPCS
Trigger: GGAGCAGGGAAGCTTTCCCCAGGATGACTGGGGCAT...GTCCAACTGAGACTCTGAGATTGACGGGCTACCTCCCCCACCCGTGGCCCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR CAA 90 bp CTGGCTGAGGTATTGCGTGTGAGGAAGGGACACTGGGTTACGGGATaGGGTCCAACCGTGCAGAGGCTCACCAAGGAGATGGACAGGGCA +
Preference number: 2 (lower is better)
Translates to: LAEVLRVRKGHWVTG*GPTVQRLTKEMDRA
Trigger: TGCCCTGTCCATCTCCTTGGTGAGCCTCTGCACGGTTGGACCCAATCCCGTAACCCAGTGTCCCTTCCTCACACGCAATACCTCAGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR-3UTR CCA 90 bp GAAGGGTCTCCAGGGGAGACCCCTGTACTGTGTAAACGAAGCCCATCCAGTTCTGGCAAGGATGCACTGTaGGGTGGAGGGGCAGGACCT +
Preference number: 2 (lower is better)
Translates to: EGSPGETPVLCKRSPSSSGKDAL*GGGAGP
Trigger: AGGTCCTGCCCCTCCACCCCACAGTGCATCCTTGCC...AGAACTGGATGGGCTTCGTTTACACAGTACAGGGGTCTCCCCTGGAGACCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR-3UTR CCA 90 bp GCGGCAGCCCTTAAGAGAGGTCACATTGATTGTCGTATAGGGAAGGAGAGGTTAGGAGGAAGGGCTCCCTaGGACGGCCCCTCTCCCCTC +
Preference number: 2 (lower is better)
Translates to: AAALKRGHIDCRIGKERLGGRAP*DGPSPL
Trigger: GAGGGGAGAGGGGCCGTCCCAGGGAGCCCTTCCTCC...TAACCTCTCCTTCCCTATACGACAATCAATGTGACCTCTCTTAAGGGCTGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR-3UTR CCA 90 bp CCAGTTCTCAGTTCTCAAGGGGCAATACTGATGGCAGCCAAACTGGGCAAGGATGAGGAGGGGTCTGCCTaGCAGCAGAGGAGAGGGGAG +
Preference number: 2 (lower is better)
Translates to: PVLSSQGAILMAAKLGKDEEGSA*QQRRGE
Trigger: CTCCCCTCTCCTCTGCTGCCAGGCAGACCCCTCCTC...ATCCTTGCCCAGTTTGGCTGCCATCAGTATTGCCCCTTGAGAACTGAGAACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR-3UTR CCA 90 bp GGGCAGTGGGTACTCTCAGACATGACAGAAGGTAGAGACAGACACAGGGCATGGGGGCCAGGCCAGAAGTaGGAAACAGGAGCAGGCTGT +
Preference number: 2 (lower is better)
Translates to: GQWVLSDMTEGRDRHRAWGPGQK*ETGAGC
Trigger: ACAGCCTGCTCCTGTTTCCCACTTCTGGCCTGGCCC...CCATGCCCTGTGTCTGTCTCTACCTTCTGTCATGTCTGAGAGTACCCACTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR-3UTR GCA 90 bp GGGCAGTGGGTACTCTCAGACATGACAGAAGGTAGAGACAGACACAGGGCATGGAAGGCTTCTCACTGCTaGAGGGATGGAGGGCCAAGC +
Preference number: 2 (lower is better)
Translates to: GQWVLSDMTEGRDRHRAWKASHC*RDGGPS
Trigger: GCTTGGCCCTCCATCCCTGCAGCAGTGAGAAGCCTT...CCATGCCCTGTGTCTGTCTCTACCTTCTGTCATGTCTGAGAGTACCCACTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR CAA 90 bp CAGGACCTCTATTCAAGTTCTGTGTCTTGGCCCCTGGCTGAGGTATaGCGTGTGAGGAAGGGACACTGGGTTACGGGATTGGGTCCAACC +
Preference number: 2 (lower is better)
Translates to: QDLYSSSVSWPLAEV*RVRKGHWVTGLGPT
Trigger: GGTTGGACCCAATCCCGTAACCCAGTGTCCCTTCCTCACACGCAATACCTCAGCCAGGGGCCAAGACACAGAACTTGAATAGAGGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR-3UTR TCA 90 bp AGAGAGCCAAGGAAGGAATGGCCACAGGCTCCCCTCTCCCAAAAGAAGTTAAAACCCTTGGTTTGCACATaGGGAGCCAGGGGAGAGCGC +
Preference number: 2 (lower is better)
Translates to: REPRKEWPQAPLSQKKLKPLVCT*GARGER
Trigger: GCGCTCTCCCCTGGCTCCTCATGTGCAAACCAAGGG...TTTTAACTTCTTTTGGGAGAGGGGAGCCTGTGGCCATTCCTTCCTTGGCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR-3UTR GCA 90 bp TTCCCATGTCTGTTTCCCTGTCTCCTATGTAGCCCTCGCTCTGTCTCCTTTGCTAGGAGGTCCCCACACTaGCCCTGCCCTTCCTACCAT +
Preference number: 2 (lower is better)
Translates to: FPCLFPCLLCSPRSVSFARRSPH*PCPSYH
Trigger: ATGGTAGGAAGGGCAGGGGCAGTGTGGGGACCTCCT...AGCAAAGGAGACAGAGCGAGGGCTACATAGGAGACAGGGAAACAGACATGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR-3UTR CCA 90 bp GAAGGGTCTCCAGGGGAGACCCCTGTACTGTGTAAACGAAGCCCATCCAGTTCTCAGGCCAGGATGGTGTaGCAAAGGGTAAACAGCTGC +
Preference number: 2 (lower is better)
Translates to: EGSPGETPVLCKRSPSSSQARMV*QRVNSC
Trigger: GCAGCTGTTTACCCTTTGCCACACCATCCTGGCCTG...AGAACTGGATGGGCTTCGTTTACACAGTACAGGGGTCTCCCCTGGAGACCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR-3UTR CCA 90 bp GAAGGGTCTCCAGGGGAGACCCCTGTACTGTGTAAACGAAGCCCATCCAGTTCTGGGCATGGAAAACTCTaGGGTTGGGGAACACAGGAG +
Preference number: 2 (lower is better)
Translates to: EGSPGETPVLCKRSPSSSGHGKL*GWGTQE
Trigger: CTCCTGTGTTCCCCAACCCCAGAGTTTTCCATGCCC...AGAACTGGATGGGCTTCGTTTACACAGTACAGGGGTCTCCCCTGGAGACCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR-3UTR CCA 90 bp AAAGGTGAGCTGGACTTACAGTCAGAACGGATAGGGGTGAGGAAGGAGGAGGGGCACCCCTGGCAAGGGTaGCAAGACATTCAAGGGACA +
Preference number: 2 (lower is better)
Translates to: KGELDLQSERIGVRKEEGHPWQG*QDIQGT
Trigger: TGTCCCTTGAATGTCTTGCCACCCTTGCCAGGGGTG...CCCCTCCTCCTTCCTCACCCCTATCCGTTCTGACTGTAAGTCCAGCTCACCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR CAA 90 bp TGGACAGGGCATCTGAAGGGACCAGGGCCAGATGCAATGCTACATTaGAAGAGAACACTGCCCTCCCCATTCCAGCCCAGTTTGGCTTCT +
Preference number: 2 (lower is better)
Translates to: WTGHLKGPGPDAMLH*KRTLPSPFQPSLAS
Trigger: AGAAGCCAAACTGGGCTGGAATGGGGAGGGCAGTGTTCTCTTCAAATGTAGCATTGCATCTGGCCCTGGTCCCTTCAGATGCCCTGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR-3UTR GCA 90 bp AAGTTAAAAGAAAGAAGCAAGGTTAAAGTGCGTGGTGAGGGGGCCAGGCCAGAAGTGCATCCTCCCCTCTaGCCCACCACCCAGTCGTGT +
Preference number: 2 (lower is better)
Translates to: KLKERSKVKVRGEGARPEVHPPL*PTTQSC
Trigger: ACACGACTGGGTGGTGGGGCAGAGGGGAGGATGCAC...TTCTGGCCTGGCCCCCTCACCACGCACTTTAACCTTGCTTCTTTCTTTTAACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR-3UTR GCA 90 bp CCAGTTCTCAGTTCTCAAGGGGCAATACTGATGGCAGCCAAACTGGGCAAGGATTCAACCATCTCTCCATaGTGGGAGGGCAGGGGACTG +
Preference number: 2 (lower is better)
Translates to: PVLSSQGAILMAAKLGKDSTISP*WEGRGL
Trigger: CAGTCCCCTGCCCTCCCAGCATGGAGAGATGGTTGA...ATCCTTGCCCAGTTTGGCTGCCATCAGTATTGCCCCTTGAGAACTGAGAACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR-3UTR CCA 90 bp TTCCCATGTCTGTTTCCCTGTCTCCTATGTAGCCCTCGCTCTGTCTCCTTTGCTCAGAAGGGATTGCCCTaGGGGTACCAAGAGCCTAGG +
Preference number: 2 (lower is better)
Translates to: FPCLFPCLLCSPRSVSFAQKGLP*GYQEPR
Trigger: CCTAGGCTCTTGGTACCCCCAGGGCAATCCCTTCTG...AGCAAAGGAGACAGAGCGAGGGCTACATAGGAGACAGGGAAACAGACATGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR-3UTR CCA 90 bp CCAGTTCTCAGTTCTCAAGGGGCAATACTGATGGCAGCCAAACTGGGCAAGGATACCATCTCTCCATGCTaGGAGGGCAGGGGACTGAAC +
Preference number: 2 (lower is better)
Translates to: PVLSSQGAILMAAKLGKDTISPC*EGRGLN
Trigger: GTTCAGTCCCCTGCCCTCCCAGCATGGAGAGATGGT...ATCCTTGCCCAGTTTGGCTGCCATCAGTATTGCCCCTTGAGAACTGAGAACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR CAA 90 bp GGGCTCCCGACAAATCCTCAGACTCTCCTCTGTCATCACCAAGCATaGATAAAGGAGAACACGACCGATGCCCCAGTCATCCTGGGGAAA +
Preference number: 2 (lower is better)
Translates to: GLPTNPQTLLCHHQA*IKENTTDAPVILGK
Trigger: TTTCCCCAGGATGACTGGGGCATCGGTCGTGTTCTCCTTTATCAATGCTTGGTGATGACAGAGGAGAGTCTGAGGATTTGTCGGGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR-3UTR TCA 90 bp AAAGGTGAGCTGGACTTACAGTCAGAACGGATAGGGGTGAGGAAGGAGGAGGGGGGGTACTCTCAGACATaGCAGAAGGTAGAGACAGAC +
Preference number: 2 (lower is better)
Translates to: KGELDLQSERIGVRKEEGGYSQT*QKVETD
Trigger: GTCTGTCTCTACCTTCTGTCATGTCTGAGAGTACCC...CCCCTCCTCCTTCCTCACCCCTATCCGTTCTGACTGTAAGTCCAGCTCACCTTT
53% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR-3UTR TCA 90 bp TTCCCATGTCTGTTTCCCTGTCTCCTATGTAGCCCTCGCTCTGTCTCCTTTGCTCTCAAGGGGCAATACTaGTGGCAGCCAAACTGGGCA +
Preference number: 2 (lower is better)
Translates to: FPCLFPCLLCSPRSVSFALKGQY*WQPNWA
Trigger: TGCCCAGTTTGGCTGCCATCAGTATTGCCCCTTGAG...AGCAAAGGAGACAGAGCGAGGGCTACATAGGAGACAGGGAAACAGACATGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR-3UTR GCA 90 bp TTCCCATGTCTGTTTCCCTGTCTCCTATGTAGCCCTCGCTCTGTCTCCTTTGCTCAGCATGAGGTATGGTaGAGGGTATCTGTCGGGAGG +
Preference number: 2 (lower is better)
Translates to: FPCLFPCLLCSPRSVSFAQHEVW*RVSVGR
Trigger: CCTCCCGACAGATACCCTGCACCATACCTCATGCTG...AGCAAAGGAGACAGAGCGAGGGCTACATAGGAGACAGGGAAACAGACATGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR-3UTR GCA 90 bp TGTGTAAACGAAGCCCATCCAGTTCTCAGTTCTCAAGGGGCAATACTGATGGCACTTGGCAGAAGGGATTaGCCTGGGGGTACCAAGAGC +
Preference number: 2 (lower is better)
Translates to: CVNEAHPVLSSQGAILMALGRRD*PGGTKS
Trigger: GCTCTTGGTACCCCCAGGGCAATCCCTTCTGCCAAG...TGCCATCAGTATTGCCCCTTGAGAACTGAGAACTGGATGGGCTTCGTTTACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR-3UTR GCA 90 bp TTCCCATGTCTGTTTCCCTGTCTCCTATGTAGCCCTCGCTCTGTCTCCTTTGCTATTAAGGCTTCTCACTaGTGCAGGGATGGAGGGCCA +
Preference number: 2 (lower is better)
Translates to: FPCLFPCLLCSPRSVSFAIKASH*CRDGGP
Trigger: TGGCCCTCCATCCCTGCAGCAGTGAGAAGCCTTAAT...AGCAAAGGAGACAGAGCGAGGGCTACATAGGAGACAGGGAAACAGACATGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR-3UTR GCA 90 bp TTCCCATGTCTGTTTCCCTGTCTCCTATGTAGCCCTCGCTCTGTCTCCTTTGCTGGGACACCCCCAGAGTaGTCACACAGTACCAGAAAT +
Preference number: 2 (lower is better)
Translates to: FPCLFPCLLCSPRSVSFAGTPPE*SHSTRN
Trigger: ATTTCTGGTACTGTGTGAGCACTCTGGGGGTGTCCC...AGCAAAGGAGACAGAGCGAGGGCTACATAGGAGACAGGGAAACAGACATGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR-3UTR CCA 90 bp AAGTTAAAAGAAAGAAGCAAGGTTAAAGTGCGTGGTGAGGGGGCCAGGCCAGAAGGAGAGCGCAAGTTCTaGGCCGGGTTCAGTAGTTGC +
Preference number: 2 (lower is better)
Translates to: KLKERSKVKVRGEGARPEGERKF*AGFSSC
Trigger: GCAACTACTGAACCCGGCCCAGAACTTGCGCTCTCC...TTCTGGCCTGGCCCCCTCACCACGCACTTTAACCTTGCTTCTTTCTTTTAACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR-3UTR CCA 90 bp GCGGCAGCCCTTAAGAGAGGTCACATTGATTGTCGTATAGGGAAGGAGAGGTTAGACAGACACAGGGCATaGAAAACTCTGGGGTTGGGG +
Preference number: 2 (lower is better)
Translates to: AAALKRGHIDCRIGKERLDRHRA*KTLGLG
Trigger: CCCCAACCCCAGAGTTTTCCATGCCCTGTGTCTGTC...TAACCTCTCCTTCCCTATACGACAATCAATGTGACCTCTCTTAAGGGCTGCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR-3UTR CCA 90 bp AAGCCTCAAAAGTTCAAGGAGAAGAGAGCCAAGGAAGGAATGGCCACAGGCTCCTCATTTTGGGACACTTaGCAGAAGGGATTGCCCTGG +
Preference number: 2 (lower is better)
Translates to: KPQKFKEKRAKEGMATGSSFWDT*QKGLPW
Trigger: CCAGGGCAATCCCTTCTGCCAAGTGTCCCAAAATGA...GGAGCCTGTGGCCATTCCTTCCTTGGCTCTCTTCTCCTTGAACTTTTGAGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR-3UTR CCA 90 bp GCGGCAGCCCTTAAGAGAGGTCACATTGATTGTCGTATAGGGAAGGAGAGGTTAGGAAAACTCTGGGGTTaGGGAACACAGGAGGAAGAA +
Preference number: 2 (lower is better)
Translates to: AAALKRGHIDCRIGKERLGKLWG*GTQEEE
Trigger: TTCTTCCTCCTGTGTTCCCCAACCCCAGAGTTTTCC...TAACCTCTCCTTCCCTATACGACAATCAATGTGACCTCTCTTAAGGGCTGCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR CAA 90 bp ATGCTACATTTGAAGAGAACACTGCCCTCCCCATTCCAGCCCAGTTaGGCTTCTCGGGTACATTCCAGAACCTTATCAGTGCAGAGTCTA +
Preference number: 2 (lower is better)
Translates to: MLHLKRTLPSPFQPS*ASRVHSRTLSVQSL
Trigger: TAGACTCTGCACTGATAAGGTTCTGGAATGTACCCGAGAAGCCAAACTGGGCTGGAATGGGGAGGGCAGTGTTCTCTTCAAATGTAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR-3UTR GCA 90 bp ACAGGGCATCTGAAGGGACCAGGGCCAGATGCAATGCTACATTTGAAGAGAACAGCCGGGTTCAGTAGTTaGTGCTTCAAGTGTTTGCAT +
Preference number: 2 (lower is better)
Translates to: TGHLKGPGPDAMLHLKRTAGFSS*CFKCLH
Trigger: ATGCAAACACTTGAAGCAGCAACTACTGAACCCGGC...TGTTCTCTTCAAATGTAGCATTGCATCTGGCCCTGGTCCCTTCAGATGCCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR-3UTR CCA 90 bp AAATCAGAAACTAAAAACTGGCTCTTTTCGTGTCACCCTCTGATTCCCATGTCTGAGCCAAGGAAGGAATaGCCACAGGCTCCCCTCTCC +
Preference number: 2 (lower is better)
Translates to: KSETKNWLFSCHPLIPMSEPRKE*PQAPLS
Trigger: GGAGAGGGGAGCCTGTGGCCATTCCTTCCTTGGCTC...AGACATGGGAATCAGAGGGTGACACGAAAAGAGCCAGTTTTTAGTTTCTGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR-3UTR GCA 90 bp GGGAGACCCCTGTACTGTGTAAACGAAGCCCATCCAGTTCTCAGTTCTCAAGGGTCACATGCAAACACATaGCTGAAACACAGGACATAT +
Preference number: 2 (lower is better)
Translates to: GRPLYCVNEAHPVLSSQGSHANT*LKHRTY
Trigger: ATATGTCCTGTGTTTCAGGCATGTGTTTGCATGTGA...CCCTTGAGAACTGAGAACTGGATGGGCTTCGTTTACACAGTACAGGGGTCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR-3UTR CCA 90 bp TGTGTAAACGAAGCCCATCCAGTTCTCAGTTCTCAAGGGGCAATACTGATGGCACCTTCCTACCATCTTTaGCTTCATATCAGGAGTGAC +
Preference number: 2 (lower is better)
Translates to: CVNEAHPVLSSQGAILMAPSYHL*LHIRSD
Trigger: GTCACTCCTGATATGAAGCCAAAGATGGTAGGAAGG...TGCCATCAGTATTGCCCCTTGAGAACTGAGAACTGGATGGGCTTCGTTTACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR TCA 72 bp AGGCTGTGGGGGCAGAAGCAGCCCTTGGTTTGCACATaGGGAGCCAGGGGAGAGCGCAAGTTCTGGGCCGGG +
Preference number: 3 (lower is better)
Translates to: RLWGQKQPLVCT*GARGERKFWAG
Trigger: CCCGGCCCAGAACTTGCGCTCTCCCCTGGCTCCTCATGTGCAAACCAAGGGCTGCTTCTGCCCCCACAGCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR CCA 72 bp CCCCTGGCTGAGGTATTGCGTGTGAGGAAGGGACACTaGGTTACGGGATTGGGTCCAACCGTGCAGAGGCTC +
Preference number: 3 (lower is better)
Translates to: PLAEVLRVRKGH*VTGLGPTVQRL
Trigger: GAGCCTCTGCACGGTTGGACCCAATCCCGTAACCCAGTGTCCCTTCCTCACACGCAATACCTCAGCCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR CCA 72 bp CCTCAGCCCCTCCACCCCAAGGAACACATGTCTACGTaGGGTGGCTGTCCCTCAGTCTCATGTTTCCCACCC +
Preference number: 3 (lower is better)
Translates to: PQPLHPKEHMST*GGCPSVSCFPP
Trigger: GGGTGGGAAACATGAGACTGAGGGACAGCCACCCCACGTAGACATGTGTTCCTTGGGGTGGAGGGGCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR TCA 72 bp GATTCGGACAAACACCCCGGGCTTCTGGGACCAGCATaGGGTATGGTGCAGGGTATCTGTCGGGAGGAAGGG +
Preference number: 3 (lower is better)
Translates to: DSDKHPGLLGPA*GMVQGICREEG
Trigger: CCCTTCCTCCCGACAGATACCCTGCACCATACCTCATGCTGGTCCCAGAAGCCCGGGGTGTTTGTCCGAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR GCA 72 bp GGAAGGGACACTGGGTTACGGGATTGGGTCCAACCGTaGAGAGGCTCACCAAGGAGATGGACAGGGCATCTG +
Preference number: 3 (lower is better)
Translates to: GRDTGLRDWVQP*RGSPRRWTGHL
Trigger: CAGATGCCCTGTCCATCTCCTTGGTGAGCCTCTGCACGGTTGGACCCAATCCCGTAACCCAGTGTCCCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR-3UTR CAA 90 bp AAAGGTGAGCTGGACTTACAGTCAGAACGGATAGGGGTGAGGAAGGAGGAGGGGCCCCTGGCTGAGGTATaGCGTGTGAGGAAGGGACAC +
Preference number: 3 (lower is better)
Translates to: KGELDLQSERIGVRKEEGPLAEV*RVRKGH
Trigger: GTGTCCCTTCCTCACACGCAATACCTCAGCCAGGGG...CCCCTCCTCCTTCCTCACCCCTATCCGTTCTGACTGTAAGTCCAGCTCACCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR CCA 72 bp CTATGTAGCCCTCGCTCTGTCTCCTTTGCTGGGACCTaGGGCTGTCCCCAGGGTCCTCATGTAAATAGGCCT +
Preference number: 3 (lower is better)
Translates to: LCSPRSVSFAGT*GCPQGPHVNRP
Trigger: AGGCCTATTTACATGAGGACCCTGGGGACAGCCCCAGGTCCCAGCAAAGGAGACAGAGCGAGGGCTACATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR TCA 72 bp GTTCTGTGTCTTGGCCCCTGGCTGAGGTATTGCGTGTaGGGAAGGGACACTGGGTTACGGGATTGGGTCCAA +
Preference number: 3 (lower is better)
Translates to: VLCLGPWLRYCV*GRDTGLRDWVQ
Trigger: TTGGACCCAATCCCGTAACCCAGTGTCCCTTCCTCACACGCAATACCTCAGCCAGGGGCCAAGACACAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR TCA 72 bp CCCGTCAATCTCAGAGTCTCAGTTGGACAGTGGCAGTaGCTCGGGTCTGTTGGTCCATTCTGGGACCCACAG +
Preference number: 3 (lower is better)
Translates to: PVNLRVSVGQWQ*LGSVGPFWDPQ
Trigger: CTGTGGGTCCCAGAATGGACCAACAGACCCGAGTCACTGCCACTGTCCAACTGAGACTCTGAGATTGACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR CCA 72 bp GTGGAGGGGCAGGACCTCTATTCAAGTTCTGTGTCTTaGCCCCTGGCTGAGGTATTGCGTGTGAGGAAGGGA +
Preference number: 3 (lower is better)
Translates to: VEGQDLYSSSVS*PLAEVLRVRKG
Trigger: TCCCTTCCTCACACGCAATACCTCAGCCAGGGGCCAAGACACAGAACTTGAATAGAGGTCCTGCCCCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR CCA 72 bp TGCTTATTACTTGAAGCAAGTGCTTTAGAGCTGCGGTaGGGAGAGGGGAGGGGGAGGAGAGGGAGAGGGAAG +
Preference number: 3 (lower is better)
Translates to: CLLLEASALELR*GEGRGRRGRGK
Trigger: CTTCCCTCTCCCTCTCCTCCCCCTCCCCTCTCCCCACCGCAGCTCTAAAGCACTTGCTTCAAGTAATAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR CCA 72 bp CAATCATTTTGGGACACTTGGCAGAAGGGATTGCCCTaGGGGTACCAAGAGCCTAGGGTGCTCCCTGTAGGT +
Preference number: 3 (lower is better)
Translates to: QSFWDTWQKGLP*GYQEPRVLPVG
Trigger: ACCTACAGGGAGCACCCTAGGCTCTTGGTACCCCCAGGGCAATCCCTTCTGCCAAGTGTCCCAAAATGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR TCA 72 bp GGACCTCTATTCAAGTTCTGTGTCTTGGCCCCTGGCTaGGGTATTGCGTGTGAGGAAGGGACACTGGGTTAC +
Preference number: 3 (lower is better)
Translates to: GPLFKFCVLAPG*GIACEEGTLGY
Trigger: GTAACCCAGTGTCCCTTCCTCACACGCAATACCTCAGCCAGGGGCCAAGACACAGAACTTGAATAGAGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR TCA 72 bp AAGCCCATCCAGTTCTCAGTTCTCAAGGGGCAATACTaGTGGCAGCCAAACTGGGCAAGGATGCACTGTGGG +
Preference number: 3 (lower is better)
Translates to: KPIQFSVLKGQY*WQPNWARMHCG
Trigger: CCCACAGTGCATCCTTGCCCAGTTTGGCTGCCATCAGTATTGCCCCTTGAGAACTGAGAACTGGATGGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR GCA 72 bp TCATCACCAAGCATTGATAAAGGAGAACACGACCGATaGCCCAGTCATCCTGGGGAAAGCTTCCCTGCTCCC +
Preference number: 3 (lower is better)
Translates to: SSPSIDKGEHDR*PSHPGESFPAP
Trigger: GGGAGCAGGGAAGCTTTCCCCAGGATGACTGGGGCATCGGTCGTGTTCTCCTTTATCAATGCTTGGTGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR-3UTR CAA 90 bp GCGGCAGCCCTTAAGAGAGGTCACATTGATTGTCGTATAGGGAAGGAGAGGTTAACTTGGCAGAAGGGATaGCCCTGGGGGTACCAAGAG +
Preference number: 3 (lower is better)
Translates to: AAALKRGHIDCRIGKERLTWQKG*PWGYQE
Trigger: CTCTTGGTACCCCCAGGGCAATCCCTTCTGCCAAGT...TAACCTCTCCTTCCCTATACGACAATCAATGTGACCTCTCTTAAGGGCTGCCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR TCA 72 bp GGTCACATTGATTGTCGTATAGGGAAGGAGAGGTTATaGAGGGGTGTAGGCAAGAGGGGCATTGCAAGGCCC +
Preference number: 3 (lower is better)
Translates to: GHIDCRIGKERL*RGVGKRGIARP
Trigger: GGGCCTTGCAATGCCCCTCTTGCCTACACCCCTTCATAACCTCTCCTTCCCTATACGACAATCAATGTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR-3UTR CAA 90 bp GGGAGACCCCTGTACTGTGTAAACGAAGCCCATCCAGTTCTCAGTTCTCAAGGGATCATTTTGGGACACTaGGCAGAAGGGATTGCCCTG +
Preference number: 3 (lower is better)
Translates to: GRPLYCVNEAHPVLSSQGIILGH*AEGIAL
Trigger: CAGGGCAATCCCTTCTGCCAAGTGTCCCAAAATGAT...CCCTTGAGAACTGAGAACTGGATGGGCTTCGTTTACACAGTACAGGGGTCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR-3UTR CAA 90 bp GCGGCAGCCCTTAAGAGAGGTCACATTGATTGTCGTATAGGGAAGGAGAGGTTAAGTCGGAAGGAAAAGTaGGGGGAGCTGGCAGCAAAC +
Preference number: 3 (lower is better)
Translates to: AAALKRGHIDCRIGKERLSRKEK*GELAAN
Trigger: GTTTGCTGCCAGCTCCCCCAACTTTTCCTTCCGACT...TAACCTCTCCTTCCCTATACGACAATCAATGTGACCTCTCTTAAGGGCTGCCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR-3UTR CAA 90 bp GGGCAGTGGGTACTCTCAGACATGACAGAAGGTAGAGACAGACACAGGGCATGGCATTTAGCAATCATTTaGGGACACTTGGCAGAAGGG +
Preference number: 3 (lower is better)
Translates to: GQWVLSDMTEGRDRHRAWHLAII*GHLAEG
Trigger: CCCTTCTGCCAAGTGTCCCAAAATGATTGCTAAATG...CCATGCCCTGTGTCTGTCTCTACCTTCTGTCATGTCTGAGAGTACCCACTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR-3UTR CAA 90 bp GATAAAGGAGAACACGACCGATGCCCCAGTCATCCTGGGGAAAGCTTCCCTGCTACCAATAATGGTCATTaGGAAGCCTTGAAATGGTTT +
Preference number: 3 (lower is better)
Translates to: DKGEHDRCPSHPGESFPATNNGH*EALKWF
Trigger: AAACCATTTCAAGGCTTCCAAATGACCATTATTGGT...AGCAGGGAAGCTTTCCCCAGGATGACTGGGGCATCGGTCGTGTTCTCCTTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR-3UTR CAA 90 bp CAAAAGTTCAAGGAGAAGAGAGCCAAGGAAGGAATGGCCACAGGCTCCCCTCTCTTCAAGTGTTTGCATTaGAATTTTAGGGGTGATAGG +
Preference number: 3 (lower is better)
Translates to: QKFKEKRAKEGMATGSPLFKCLH*NFRGDR
Trigger: CCTATCACCCCTAAAATTCAAATGCAAACACTTGAA...GAGAGGGGAGCCTGTGGCCATTCCTTCCTTGGCTCTCTTCTCCTTGAACTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR GCA 72 bp GAACATGGTCCCTACCTCCAATCACATGCAAACACATaGCTGAAACACAGGACATATACTAGGGCTGTAGTT +
Preference number: 3 (lower is better)
Translates to: EHGPYLQSHANT*LKHRTYTRAVV
Trigger: AACTACAGCCCTAGTATATGTCCTGTGTTTCAGGCATGTGTTTGCATGTGATTGGAGGTAGGGACCATGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR-3UTR CAA 90 bp AAATCAGAAACTAAAAACTGGCTCTTTTCGTGTCACCCTCTGATTCCCATGTCTTGTCATCACCAAGCATaGATAAAGGAGAACACGACC +
Preference number: 3 (lower is better)
Translates to: KSETKNWLFSCHPLIPMSCHHQA*IKENTT
Trigger: GGTCGTGTTCTCCTTTATCAATGCTTGGTGATGACA...AGACATGGGAATCAGAGGGTGACACGAAAAGAGCCAGTTTTTAGTTTCTGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR TCA 90 bp CAGGGGGCCACGGGTGGGGGAGGTAGCCCGTCAATCTCAGAGTCTCAGTTGGACGCGAAGGCAGCGGCGTaGAGGGGAGTCCGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: QGATGGGGSPSISESQLDAKAAA*RGVRPL
Trigger: CAAAGGACGGACTCCCCTTCACGCCGCTGCCTTCGC...GTCCAACTGAGACTCTGAGATTGACGGGCTACCTCCCCCACCCGTGGCCCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR TCA 90 bp CAGGGGGCCACGGGTGGGGGAGGTAGCCCGTCAATCTCAGAGTCTCAGTTGGACCAGGCTGAGGCCAGGTaGATGGGTGTGCGGCCCTTA +
Preference number: 4 (lower is better)
Translates to: QGATGGGGSPSISESQLDQAEAR*MGVRPL
Trigger: TAAGGGCCGCACACCCATTCACCTGGCCTCAGCCTG...GTCCAACTGAGACTCTGAGATTGACGGGCTACCTCCCCCACCCGTGGCCCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp GATAAAGGAGAACACGACCGATGCCCCAGTCATCCTGGGGAAAGCTTCCCTGCTGTCACTGCCCCACGGTaGAGGGCAGTGCGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: DKGEHDRCPSHPGESFPAVTAPR*RAVRPR
Trigger: CCGGGGCCGCACTGCCCTCCACCGTGGGGCAGTGAC...AGCAGGGAAGCTTTCCCCAGGATGACTGGGGCATCGGTCGTGTTCTCCTTTATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR TCA 90 bp CCCAGACCTCTGCCAGGCCAGGATGGTGTGGCAAAGGGTAAACAGCTGCTCCCCCCTGAAGCAGCAGCATaGAGACAGGTGCGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: PRPLPGQDGVAKGKQLLPPEAAA*RQVRPR
Trigger: CCTTGGCCGCACCTGTCTTCATGCTGCTGCTTCAGG...GGGGAGCAGCTGTTTACCCTTTGCCACACCATCCTGGCCTGGCAGAGGTCTGGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp CAGGGGGCCACGGGTGGGGGAGGTAGCCCGTCAATCTCAGAGTCTCAGTTGGACCATCTAGGGGGTCTGTaGAAAGGGCAGCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: QGATGGGGSPSISESQLDHLGGL*KGQPAA
Trigger: TGCTGCAGGCTGCCCTTTCCACAGACCCCCTAGATG...GTCCAACTGAGACTCTGAGATTGACGGGCTACCTCCCCCACCCGTGGCCCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp CAGGGGGCCACGGGTGGGGGAGGTAGCCCGTCAATCTCAGAGTCTCAGTTGGACAGCGCAGGCCAGTGCTaGGGTGTGACCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: QGATGGGGSPSISESQLDSAGQC*GVTFFI
Trigger: GATGAAGAAGGTCACACCCCAGCACTGGCCTGCGCT...GTCCAACTGAGACTCTGAGATTGACGGGCTACCTCCCCCACCCGTGGCCCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR TCA 90 bp CAGGGGGCCACGGGTGGGGGAGGTAGCCCGTCAATCTCAGAGTCTCAGTTGGACTCCTGTCAGCCACATTaGGACTGCTCAACAGGGGTG +
Preference number: 4 (lower is better)
Translates to: QGATGGGGSPSISESQLDSCQPH*DCSTGV
Trigger: CACCCCTGTTGAGCAGTCTCAATGTGGCTGACAGGA...GTCCAACTGAGACTCTGAGATTGACGGGCTACCTCCCCCACCCGTGGCCCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR GCA 90 bp CAGGGGGCCACGGGTGGGGGAGGTAGCCCGTCAATCTCAGAGTCTCAGTTGGACAGAAAAGCTGCCCAGTaGAGCGGCTGCCGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: QGATGGGGSPSISESQLDRKAAQ*SGCRSF
Trigger: AAAGGAACGGCAGCCGCTGCACTGGGCAGCTTTTCT...GTCCAACTGAGACTCTGAGATTGACGGGCTACCTCCCCCACCCGTGGCCCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp CCCAGACCTCTGCCAGGCCAGGATGGTGTGGCAAAGGGTAAACAGCTGCTCCCCGGCCAGTGTGGTCGGTaGCATTCACTTCGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: PRPLPGQDGVAKGKQLLPGQCGR*HSLRLG
Trigger: ACCAAGCCGAAGTGAATGCCACCGACCACACTGGCC...GGGGAGCAGCTGTTTACCCTTTGCCACACCATCCTGGCCTGGCAGAGGTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR GCA 90 bp CAGGGGGCCACGGGTGGGGGAGGTAGCCCGTCAATCTCAGAGTCTCAGTTGGACGCTACCATTAGCAGCTaGATAGTGCAGTGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: QGATGGGGSPSISESQLDATISS*IVQWGP
Trigger: AGGACCCCACTGCACTATGCAGCTGCTAATGGTAGC...GTCCAACTGAGACTCTGAGATTGACGGGCTACCTCCCCCACCCGTGGCCCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp GGGCAGTGGGTACTCTCAGACATGACAGAAGGTAGAGACAGACACAGGGCATGGCGGCTAAAGATGGCCTaGACCAGGGGCGGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: GQWVLSDMTEGRDRHRAWRLKMA*TRGGWS
Trigger: GGACCAGCCGCCCCTGGTCCAGGCCATCTTTAGCCG...CCATGCCCTGTGTCTGTCTCTACCTTCTGTCATGTCTGAGAGTACCCACTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp GAGCCACAGTGTCAGTCTGTCGCTCCCTTGACCAGTGATCCCCCTCCCACGGAGAGCAGCCACATGCAGTaGTGTCTGCCACAGCTTGTC +
Preference number: 4 (lower is better)
Translates to: EPQCQSVAPLTSDPPPTESSHMQ*CLPQLV
Trigger: GACAAGCTGTGGCAGACACCACTGCATGTGGCTGCT...CTCCGTGGGAGGGGGATCACTGGTCAAGGGAGCGACAGACTGACACTGTGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp CCCAGACCTCTGCCAGGCCAGGATGGTGTGGCAAAGGGTAAACAGCTGCTCCCCCTTCAGCATCATGGCTaGAAGCAGTGTGGGGTTCCG +
Preference number: 4 (lower is better)
Translates to: PRPLPGQDGVAKGKQLLPLQHHG*KQCGVP
Trigger: CGGAACCCCACACTGCTTCCAGCCATGATGCTGAAG...GGGGAGCAGCTGTTTACCCTTTGCCACACCATCCTGGCCTGGCAGAGGTCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp GAAGGGTCTCCAGGGGAGACCCCTGTACTGTGTAAACGAAGCCCATCCAGTTCTCCACAGCCAGCACTGTaGCCCCACGACTCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: EGSPGETPVLCKRSPSSSPQPAL*PHDSAG
Trigger: CCCTGCTGAGTCGTGGGGCCACAGTGCTGGCTGTGG...AGAACTGGATGGGCTTCGTTTACACAGTACAGGGGTCTCCCCTGGAGACCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR TCA 90 bp GAGCCACAGTGTCAGTCTGTCGCTCCCTTGACCAGTGATCCCCCTCCCACGGAGCACAGTGCAAAGGAGTaGAGGGGTTTCCCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: EPQCQSVAPLTSDPPPTEHSAKE*RGFPPS
Trigger: ACTTGGAGGGAAACCCCTTCACTCCTTTGCACTGTG...CTCCGTGGGAGGGGGATCACTGGTCAAGGGAGCGACAGACTGACACTGTGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR GCA 90 bp AAAGGTGAGCTGGACTTACAGTCAGAACGGATAGGGGTGAGGAAGGAGGAGGGGCGACTCAGCAGGGCCTaGACCACAGAAGCCAGACCG +
Preference number: 4 (lower is better)
Translates to: KGELDLQSERIGVRKEEGRLSRA*TTEARP
Trigger: CGGTCTGGCTTCTGTGGTGCAGGCCCTGCTGAGTCG...CCCCTCCTCCTTCCTCACCCCTATCCGTTCTGACTGTAAGTCCAGCTCACCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp GAGCCACAGTGTCAGTCTGTCGCTCCCTTGACCAGTGATCCCCCTCCCACGGAGAGCCGCCACATGCAGTaGAGTGAAGCCCTTGTCATT +
Preference number: 4 (lower is better)
Translates to: EPQCQSVAPLTSDPPPTESRHMQ*SEALVI
Trigger: AATGACAAGGGCTTCACTCCACTGCATGTGGCGGCT...CTCCGTGGGAGGGGGATCACTGGTCAAGGGAGCGACAGACTGACACTGTGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp AAAGGTGAGCTGGACTTACAGTCAGAACGGATAGGGGTGAGGAAGGAGGAGGGGAGCCATCTAACCCAATaGCGCCGTGCCGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: KGELDLQSERIGVRKEEGSHLTQ*RRAAPG
Trigger: GCCAGGAGCGGCACGGCGCCATTGGGTTAGATGGCT...CCCCTCCTCCTTCCTCACCCCTATCCGTTCTGACTGTAAGTCCAGCTCACCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR TCA 90 bp GATAAAGGAGAACACGACCGATGCCCCAGTCATCCTGGGGAAAGCTTCCCTGCTGGCATTCACATCCGCTaGGTGTGCCAACAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: DKGEHDRCPSHPGESFPAGIHIR*VCQQQP
Trigger: GGGCTGCTGTTGGCACACTCAGCGGATGTGAATGCC...AGCAGGGAAGCTTTCCCCAGGATGACTGGGGCATCGGTCGTGTTCTCCTTTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR TCA 90 bp GAGCCACAGTGTCAGTCTGTCGCTCCCTTGACCAGTGATCCCCCTCCCACGGAGTTTCTGCCAGGATCATaGGGGCACATTTCTCATGGC +
Preference number: 4 (lower is better)
Translates to: EPQCQSVAPLTSDPPPTEFLPGS*GHISHG
Trigger: GCCATGAGAAATGTGCCCTCATGATCCTGGCAGAAA...CTCCGTGGGAGGGGGATCACTGGTCAAGGGAGCGACAGACTGACACTGTGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR TCA 90 bp AAGTTAAAAGAAAGAAGCAAGGTTAAAGTGCGTGGTGAGGGGGCCAGGCCAGAAGGACAAGAGGCCCCGTaGGGCAGGGCGCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: KLKERSKVKVRGEGARPEGQEAP*GRAPQP
Trigger: TGGCTGTGGCGCCCTGCCTCACGGGGCCTCTTGTCC...TTCTGGCCTGGCCCCCTCACCACGCACTTTAACCTTGCTTCTTTCTTTTAACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR GCA 90 bp CCCAGACCTCTGCCAGGCCAGGATGGTGTGGCAAAGGGTAAACAGCTGCTCCCCTTGATGTTCTCCTTCTaGGAGAGGAGGGAACGCACT +
Preference number: 4 (lower is better)
Translates to: PRPLPGQDGVAKGKQLLPLMFSF*ERRERT
Trigger: AGTGCGTTCCCTCCTCTCGCAGAAGGAGAACATCAA...GGGGAGCAGCTGTTTACCCTTTGCCACACCATCCTGGCCTGGCAGAGGTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR GCA 90 bp CAAAAGTTCAAGGAGAAGAGAGCCAAGGAAGGAATGGCCACAGGCTCCCCTCTCGGGTGCCAGAGCCTCTaGACACTTGGTGGCCCGGTT +
Preference number: 4 (lower is better)
Translates to: QKFKEKRAKEGMATGSPLGCQSL*TLGGPV
Trigger: AACCGGGCCACCAAGTGTGCAGAGGCTCTGGCACCC...GAGAGGGGAGCCTGTGGCCATTCCTTCCTTGGCTCTCTTCTCCTTGAACTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR GCA 90 bp GGGAGACCCCTGTACTGTGTAAACGAAGCCCATCCAGTTCTCAGTTCTCAAGGGCATGGTGTAGAGCGCTaGGCCCGCTCCTGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: GRPLYCVNEAHPVLSSQGHGVER*ARSCQP
Trigger: TGGCTGACAGGAGCGGGCGCAGCGCTCTACACCATG...CCCTTGAGAACTGAGAACTGGATGGGCTTCGTTTACACAGTACAGGGGTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR GCA 90 bp CCCAGACCTCTGCCAGGCCAGGATGGTGTGGCAAAGGGTAAACAGCTGCTCCCCAAGAGAACAGCTAAGTaGAGGGGGAACATGTCGTGG +
Preference number: 4 (lower is better)
Translates to: PRPLPGQDGVAKGKQLLPKRTAK*RGNMSW
Trigger: CCACGACATGTTCCCCCTGCACTTAGCTGTTCTCTT...GGGGAGCAGCTGTTTACCCTTTGCCACACCATCCTGGCCTGGCAGAGGTCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR GCA 90 bp TGTGTAAACGAAGCCCATCCAGTTCTCAGTTCTCAAGGGGCAATACTGATGGCACACGGTGGAGGGCAGTaGGGCCCCGGAGGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: CVNEAHPVLSSQGAILMAHGGGQ*GPGGQQ
Trigger: CTGCTGACCTCCGGGGCCGCACTGCCCTCCACCGTG...TGCCATCAGTATTGCCCCTTGAGAACTGAGAACTGGATGGGCTTCGTTTACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR GCA 90 bp GATAAAGGAGAACACGACCGATGCCCCAGTCATCCTGGGGAAAGCTTCCCTGCTGTGGAAAGGGCAGCCTaGAGCAGAGTCCGCAGCACT +
Preference number: 4 (lower is better)
Translates to: DKGEHDRCPSHPGESFPAVERAA*SRVRST
Trigger: AGTGCTGCGGACTCTGCTGCAGGCTGCCCTTTCCAC...AGCAGGGAAGCTTTCCCCAGGATGACTGGGGCATCGGTCGTGTTCTCCTTTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR GCA 90 bp GAGCCACAGTGTCAGTCTGTCGCTCCCTTGACCAGTGATCCCCCTCCCACGGAGAAGGTCTTGGGTTTCTaGCAGGATCATGAGGGCACA +
Preference number: 4 (lower is better)
Translates to: EPQCQSVAPLTSDPPPTEKVLGF*QDHEGT
Trigger: TGTGCCCTCATGATCCTGGCAGAAACCCAAGACCTT...CTCCGTGGGAGGGGGATCACTGGTCAAGGGAGCGACAGACTGACACTGTGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR GCA 90 bp GGGCAGTGGGTACTCTCAGACATGACAGAAGGTAGAGACAGACACAGGGCATGGAGGAGCGCAGGCCAGTaGTGGGGTGTGACCTTCTTC +
Preference number: 4 (lower is better)
Translates to: GQWVLSDMTEGRDRHRAWRSAGQ*WGVTFF
Trigger: GAAGAAGGTCACACCCCAGCACTGGCCTGCGCTCCT...CCATGCCCTGTGTCTGTCTCTACCTTCTGTCATGTCTGAGAGTACCCACTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp GAGCCACAGTGTCAGTCTGTCGCTCCCTTGACCAGTGATCCCCCTCCCACGGAGATCTCGCTACCATTCTaGATGAGGATCTGGGAACGC +
Preference number: 4 (lower is better)
Translates to: EPQCQSVAPLTSDPPPTEISLPF*MRIWER
Trigger: GCGTTCCCAGATCCTCATCCAGAATGGTAGCGAGAT...CTCCGTGGGAGGGGGATCACTGGTCAAGGGAGCGACAGACTGACACTGTGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp CAAAAGTTCAAGGAGAAGAGAGCCAAGGAAGGAATGGCCACAGGCTCCCCTCTCAGCCACCCACCGTCTTaGCAGCTGCGATGCCGCAGT +
Preference number: 4 (lower is better)
Translates to: QKFKEKRAKEGMATGSPLSHPPS*QLRCRS
Trigger: ACTGCGGCATCGCAGCTGCCAAGACGGTGGGTGGCT...GAGAGGGGAGCCTGTGGCCATTCCTTCCTTGGCTCTCTTCTCCTTGAACTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR CAA 72 bp GGTGGGGGAGGTAGCCCGTCAATCTCAGAGTCTCAGTaGGACAGTGGCAGTGACTCGGGTCTGTTGGTCCAT +
Preference number: 4 (lower is better)
Translates to: GGGGSPSISESQ*DSGSDSGLLVH
Trigger: ATGGACCAACAGACCCGAGTCACTGCCACTGTCCAACTGAGACTCTGAGATTGACGGGCTACCTCCCCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR TCA 90 bp TGGACAGGGCATCTGAAGGGACCAGGGCCAGATGCAATGCTACATTTGAAGAGAGAGGCAGCGGCACGATaGAGAGGGGTCAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: WTGHLKGPGPDAMLHLKREAAAR*RGVSHS
Trigger: ACTGTGGCTGACCCCTCTTCATCGTGCCGCTGCCTC...TCTCTTCAAATGTAGCATTGCATCTGGCCCTGGTCCCTTCAGATGCCCTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR GCA 90 bp GGGCAGTGGGTACTCTCAGACATGACAGAAGGTAGAGACAGACACAGGGCATGGTTGGCAGCAGCCACATaGAGTGGTGTCTGCCACAGC +
Preference number: 4 (lower is better)
Translates to: GQWVLSDMTEGRDRHRAWLAAAT*SGVCHS
Trigger: GCTGTGGCAGACACCACTGCATGTGGCTGCTGCCAA...CCATGCCCTGTGTCTGTCTCTACCTTCTGTCATGTCTGAGAGTACCCACTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR GCA 90 bp AAAGGTGAGCTGGACTTACAGTCAGAACGGATAGGGGTGAGGAAGGAGGAGGGGGAGGTCTGCTCCACGTaGCACCAGCAGTTTCAGGAC +
Preference number: 4 (lower is better)
Translates to: KGELDLQSERIGVRKEEGEVCST*HQQFQD
Trigger: GTCCTGAAACTGCTGGTGGCACGTGGAGCAGACCTC...CCCCTCCTCCTTCCTCACCCCTATCCGTTCTGACTGTAAGTCCAGCTCACCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR GCA 90 bp GGCAGTGACTCGGGTCTGTTGGTCCATTCTGGGACCCACAGTTTGTGCCATTTGGCGCCGGGCAGTATCTaGGCCATTGGTCATGAGAGT +
Preference number: 4 (lower is better)
Translates to: GSDSGLLVHSGTHSLCHLAPGSI*AIGHES
Trigger: ACTCTCATGACCAATGGCGCAGATACTGCCCGGCGC...CAAATGGCACAAACTGTGGGTCCCAGAATGGACCAACAGACCCGAGTCACTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR GCA 90 bp GGCAGTGACTCGGGTCTGTTGGTCCATTCTGGGACCCACAGTTTGTGCCATTTGCAGCACAGTCAGGTCTaGCTTCCCTCGGTACAGCAG +
Preference number: 4 (lower is better)
Translates to: GSDSGLLVHSGTHSLCHLQHSQV*LPSVQQ
Trigger: CTGCTGTACCGAGGGAAGGCAGACCTGACTGTGCTG...CAAATGGCACAAACTGTGGGTCCCAGAATGGACCAACAGACCCGAGTCACTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR GCA 90 bp GATAAAGGAGAACACGACCGATGCCCCAGTCATCCTGGGGAAAGCTTCCCTGCTCAGAAGCCAGACCGTTaGGGGCAGCAATGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: DKGEHDRCPSHPGESFPAQKPDR*GQQCGE
Trigger: CTCTCCACATTGCTGCCCGCAACGGTCTGGCTTCTG...AGCAGGGAAGCTTTCCCCAGGATGACTGGGGCATCGGTCGTGTTCTCCTTTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp CCAGTTCTCAGTTCTCAAGGGGCAATACTGATGGCAGCCAAACTGGGCAAGGATTGGACCAGGGGCGGCTaGTCCGTGATGCTGAGGATC +
Preference number: 4 (lower is better)
Translates to: PVLSSQGAILMAAKLGKDWTRGG*SVMLRI
Trigger: GATCCTCAGCATCACGGACCAGCCGCCCCTGGTCCA...ATCCTTGCCCAGTTTGGCTGCCATCAGTATTGCCCCTTGAGAACTGAGAACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp CCAGTTCTCAGTTCTCAAGGGGCAATACTGATGGCAGCCAAACTGGGCAAGGATGAGCCTCTGCACACTTaGTGGCCCGGTTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PVLSSQGAILMAAKLGKDEPLHT*WPGWQQ
Trigger: CTGCTGCCAACCGGGCCACCAAGTGTGCAGAGGCTC...ATCCTTGCCCAGTTTGGCTGCCATCAGTATTGCCCCTTGAGAACTGAGAACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp GCGGCAGCCCTTAAGAGAGGTCACATTGATTGTCGTATAGGGAAGGAGAGGTTACGCAGCACTGCAGTGTaGCCACAGGCTGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: AAALKRGHIDCRIGKERLRSTAV*PQAEAR
Trigger: CCTGGCCTCAGCCTGTGGCCACACTGCAGTGCTGCG...TAACCTCTCCTTCCCTATACGACAATCAATGTGACCTCTCTTAAGGGCTGCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp GGGCAGTGGGTACTCTCAGACATGACAGAAGGTAGAGACAGACACAGGGCATGGGGCTGTTCACAATCTTaGCACCCAGAGCCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GQWVLSDMTEGRDRHRAWGCSQS*HPEPPA
Trigger: TGCTGGGGGCTCTGGGTGCCAAGATTGTGAACAGCC...CCATGCCCTGTGTCTGTCTCTACCTTCTGTCATGTCTGAGAGTACCCACTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp GGGAGACCCCTGTACTGTGTAAACGAAGCCCATCCAGTTCTCAGTTCTCAAGGGGCAGTGCGGCCAGTGTaGTCGGTGGCATTCACTTCG +
Preference number: 4 (lower is better)
Translates to: GRPLYCVNEAHPVLSSQGAVRPV*SVAFTS
Trigger: CGAAGTGAATGCCACCGACCACACTGGCCGCACTGC...CCCTTGAGAACTGAGAACTGGATGGGCTTCGTTTACACAGTACAGGGGTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp GGGCAGTGGGTACTCTCAGACATGACAGAAGGTAGAGACAGACACAGGGCATGGGACGGCGTCCTTGGGTaGGAAAGGCTTCATGGTGGA +
Preference number: 4 (lower is better)
Translates to: GQWVLSDMTEGRDRHRAWDGVLG*ERLHGG
Trigger: TCCACCATGAAGCCTTTCCCACCCAAGGACGCCGTC...CCATGCCCTGTGTCTGTCTCTACCTTCTGTCATGTCTGAGAGTACCCACTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR CAA 72 bp GTATTGCGTGTGAGGAAGGGACACTGGGTTACGGGATaGGGTCCAACCGTGCAGAGGCTCACCAAGGAGATG +
Preference number: 4 (lower is better)
Translates to: VLRVRKGHWVTG*GPTVQRLTKEM
Trigger: CATCTCCTTGGTGAGCCTCTGCACGGTTGGACCCAATCCCGTAACCCAGTGTCCCTTCCTCACACGCAATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR TCA 90 bp GAAGGGTCTCCAGGGGAGACCCCTGTACTGTGTAAACGAAGCCCATCCAGTTCTGCTATACAGCTGACCTaGGGAGAGAAGCTTCCGGCA +
Preference number: 4 (lower is better)
Translates to: EGSPGETPVLCKRSPSSSAIQLT*GEKLPA
Trigger: TGCCGGAAGCTTCTCTCCTCAGGTCAGCTGTATAGC...AGAACTGGATGGGCTTCGTTTACACAGTACAGGGGTCTCCCCTGGAGACCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR TCA 90 bp GGGCAGTGGGTACTCTCAGACATGACAGAAGGTAGAGACAGACACAGGGCATGGGGCTGTCCGGTGTGTTaGTGTCAAACCCAGCGGAAA +
Preference number: 4 (lower is better)
Translates to: GQWVLSDMTEGRDRHRAWGCPVC*CQTQRK
Trigger: TTTCCGCTGGGTTTGACATCAACACACCGGACAGCC...CCATGCCCTGTGTCTGTCTCTACCTTCTGTCATGTCTGAGAGTACCCACTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR GCA 90 bp GGGCAGTGGGTACTCTCAGACATGACAGAAGGTAGAGACAGACACAGGGCATGGACTGCTCAACAGGGGTaGCAGAGCCTCTGCACACTT +
Preference number: 4 (lower is better)
Translates to: GQWVLSDMTEGRDRHRAWTAQQG*QSLCTL
Trigger: AAGTGTGCAGAGGCTCTGGCACCCCTGTTGAGCAGT...CCATGCCCTGTGTCTGTCTCTACCTTCTGTCATGTCTGAGAGTACCCACTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR GCA 90 bp TTCCCATGTCTGTTTCCCTGTCTCCTATGTAGCCCTCGCTCTGTCTCCTTTGCTAATCTGGCCACTGGCTaGAGCTGTGTGGAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: FPCLFPCLLCSPRSVSFANLATG*SCVEQP
Trigger: GGGCTGCTCCACACAGCTGCAGCCAGTGGCCAGATT...AGCAAAGGAGACAGAGCGAGGGCTACATAGGAGACAGGGAAACAGACATGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR GCA 90 bp TGGACAGGGCATCTGAAGGGACCAGGGCCAGATGCAATGCTACATTTGAAGAGACAGCATGAAGACAGGTaGGGCCAAGGCTGTCCGGTG +
Preference number: 4 (lower is better)
Translates to: WTGHLKGPGPDAMLHLKRQHEDR*GQGCPV
Trigger: CACCGGACAGCCTTGGCCGCACCTGTCTTCATGCTG...TCTCTTCAAATGTAGCATTGCATCTGGCCCTGGTCCCTTCAGATGCCCTGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR GCA 90 bp GAAGGGTCTCCAGGGGAGACCCCTGTACTGTGTAAACGAAGCCCATCCAGTTCTCGAGGTTCTGTCTGTTaGCGTAGGCGGCTGCATAGT +
Preference number: 4 (lower is better)
Translates to: EGSPGETPVLCKRSPSSSRGSVC*RRRLHS
Trigger: ACTATGCAGCCGCCTACGGCAACAGACAGAACCTCG...AGAACTGGATGGGCTTCGTTTACACAGTACAGGGGTCTCCCCTGGAGACCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR GCA 90 bp GGGCAGTGGGTACTCTCAGACATGACAGAAGGTAGAGACAGACACAGGGCATGGTCGGCACAGTACAAATaGATCGTGGTCCAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GQWVLSDMTEGRDRHRAWSAQYK*IVVQQG
Trigger: GCCCTGCTGGACCACGATGCATTTGTACTGTGCCGA...CCATGCCCTGTGTCTGTCTCTACCTTCTGTCATGTCTGAGAGTACCCACTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp TTCCCATGTCTGTTTCCCTGTCTCCTATGTAGCCCTCGCTCTGTCTCCTTTGCTACTTGGTGGCCCGGTTaGCAGCAGCCACATGCAGTG +
Preference number: 4 (lower is better)
Translates to: FPCLFPCLLCSPRSVSFATWWPG*QQPHAV
Trigger: CACTGCATGTGGCTGCTGCCAACCGGGCCACCAAGT...AGCAAAGGAGACAGAGCGAGGGCTACATAGGAGACAGGGAAACAGACATGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp GCGGCAGCCCTTAAGAGAGGTCACATTGATTGTCGTATAGGGAAGGAGAGGTTACCTCTGCACACTTGGTaGCCCGGTTGGCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: AAALKRGHIDCRIGKERLPLHTW*PGWQQP
Trigger: TGGCTGCTGCCAACCGGGCCACCAAGTGTGCAGAGG...TAACCTCTCCTTCCCTATACGACAATCAATGTGACCTCTCTTAAGGGCTGCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp CCAGTTCTCAGTTCTCAAGGGGCAATACTGATGGCAGCCAAACTGGGCAAGGATTGCAGGGAATCGGTGTaGCCAGAGGCAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: PVLSSQGAILMAAKLGKDCRESV*PEAAAA
Trigger: TGCTGCTGCTGCCTCTGGCCACACCGATTCCCTGCA...ATCCTTGCCCAGTTTGGCTGCCATCAGTATTGCCCCTTGAGAACTGAGAACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp GAAGGGTCTCCAGGGGAGACCCCTGTACTGTGTAAACGAAGCCCATCCAGTTCTCAGCAGCATCAGCCGTaGATCCCTTCTCTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: EGSPGETPVLCKRSPSSSQQHQP*IPSLAA
Trigger: TGCTGCTAGAGAAGGGATCCACGGCTGATGCTGCTG...AGAACTGGATGGGCTTCGTTTACACAGTACAGGGGTCTCCCCTGGAGACCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp GGCAGTGACTCGGGTCTGTTGGTCCATTCTGGGACCCACAGTTTGTGCCATTTGAGGAGGCCCAGTGCATaGGCGAGTATCCGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: GSDSGLLVHSGTHSLCHLRRPSA*ASIRCN
Trigger: ATTACAGCGGATACTCGCCCATGCACTGGGCCTCCT...CAAATGGCACAAACTGTGGGTCCCAGAATGGACCAACAGACCCGAGTCACTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp CAGGGGGCCACGGGTGGGGGAGGTAGCCCGTCAATCTCAGAGTCTCAGTTGGACTCTGTGGTGCTGTCCTaGTTATTAATTACTGCACAG +
Preference number: 4 (lower is better)
Translates to: QGATGGGGSPSISESQLDSVVLS*LLITAQ
Trigger: CTGTGCAGTAATTAATAACCAGGACAGCACCACAGA...GTCCAACTGAGACTCTGAGATTGACGGGCTACCTCCCCCACCCGTGGCCCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp GGGAGACCCCTGTACTGTGTAAACGAAGCCCATCCAGTTCTCAGTTCTCAAGGGGGGGAGTCCGTCCTTTaGCGTCTCGGCTGTTCACAA +
Preference number: 4 (lower is better)
Translates to: GRPLYCVNEAHPVLSSQGGESVL*RLGCSQ
Trigger: TTGTGAACAGCCGAGACGCCAAAGGACGGACTCCCC...CCCTTGAGAACTGAGAACTGGATGGGCTTCGTTTACACAGTACAGGGGTCTCCC
56% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR TCA 90 bp TGTGTAAACGAAGCCCATCCAGTTCTCAGTTCTCAAGGGGCAATACTGATGGCATACAGTCGGCCTCATTaGCACCGGCCCCGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: CVNEAHPVLSSQGAILMAYSRPH*HRPRLS
Trigger: TGACAGCCGGGGCCGGTGTCAATGAGGCCGACTGTA...TGCCATCAGTATTGCCCCTTGAGAACTGAGAACTGGATGGGCTTCGTTTACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR GCA 90 bp TTCCCATGTCTGTTTCCCTGTCTCCTATGTAGCCCTCGCTCTGTCTCCTTTGCTGAGACAGCCGCCACATaGAGTGGAGTGAAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: FPCLFPCLLCSPRSVSFAETAAT*SGVKPL
Trigger: CAAGGGCTTCACTCCACTGCATGTGGCGGCTGTCTC...AGCAAAGGAGACAGAGCGAGGGCTACATAGGAGACAGGGAAACAGACATGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR GCA 90 bp AAAGGTGAGCTGGACTTACAGTCAGAACGGATAGGGGTGAGGAAGGAGGAGGGGTGGATGGCAGCCATGTaGAGGGGACTTTTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: KGELDLQSERIGVRKEEGWMAAM*RGLFPS
Trigger: AGAAGGGAAAAGTCCCCTGCACATGGCTGCCATCCA...CCCCTCCTCCTTCCTCACCCCTATCCGTTCTGACTGTAAGTCCAGCTCACCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp AAGCCTCAAAAGTTCAAGGAGAAGAGAGCCAAGGAAGGAATGGCCACAGGCTCCGGCAGCAGCATGCAATaGGGTTCGCCTCTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: KPQKFKEKRAKEGMATGSGSSMQ*GSPLLV
Trigger: GACCAAGAGAGGCGAACCCCATTGCATGCTGCTGCC...GGAGCCTGTGGCCATTCCTTCCTTGGCTCTCTTCTCCTTGAACTTTTGAGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp CAAAAGTTCAAGGAGAAGAGAGCCAAGGAAGGAATGGCCACAGGCTCCCCTCTCGTAGCAACTGGAGGATaGGGACATCGCCTACGTAGG +
Preference number: 4 (lower is better)
Translates to: QKFKEKRAKEGMATGSPLVATGG*GHRLRR
Trigger: CCTACGTAGGCGATGTCCCCATCCTCCAGTTGCTAC...GAGAGGGGAGCCTGTGGCCATTCCTTCCTTGGCTCTCTTCTCCTTGAACTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp GGGCAGTGGGTACTCTCAGACATGACAGAAGGTAGAGACAGACACAGGGCATGGCGCAGACATTCAGGCTaGCTCCCTTATTCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: GQWVLSDMTEGRDRHRAWRRHSG*LPYSGA
Trigger: TGCTCCTGAATAAGGGAGCCAGCCTGAATGTCTGCG...CCATGCCCTGTGTCTGTCTCTACCTTCTGTCATGTCTGAGAGTACCCACTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp GGGAGACCCCTGTACTGTGTAAACGAAGCCCATCCAGTTCTCAGTTCTCAAGGGCTTCAATCTGGCCACTaGCTGCAGCTGTGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: GRPLYCVNEAHPVLSSQGLQSGH*LQLCGA
Trigger: TGCTCCACACAGCTGCAGCCAGTGGCCAGATTGAAG...CCCTTGAGAACTGAGAACTGGATGGGCTTCGTTTACACAGTACAGGGGTCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp AGAGAGCCAAGGAAGGAATGGCCACAGGCTCCCCTCTCCCAAAAGAAGTTAAAAAGGGCAGAGGCACCATaGGCCGTCAGTACCTCCACA +
Preference number: 4 (lower is better)
Translates to: REPRKEWPQAPLSQKKLKRAEAP*AVSTST
Trigger: TGTGGAGGTACTGACGGCCCATGGTGCCTCTGCCCT...TTTTAACTTCTTTTGGGAGAGGGGAGCCTGTGGCCATTCCTTCCTTGGCTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp GATAAAGGAGAACACGACCGATGCCCCAGTCATCCTGGGGAAAGCTTCCCTGCTGGAAAGGCTTCATGGTaGAAAGGATCAAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: DKGEHDRCPSHPGESFPAGKASW*KGSRPG
Trigger: GCCTGGCCTTGATCCTTTCCACCATGAAGCCTTTCC...AGCAGGGAAGCTTTCCCCAGGATGACTGGGGCATCGGTCGTGTTCTCCTTTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR CAA 72 bp CATCTGAAGGGACCAGGGCCAGATGCAATGCTACATTaGAAGAGAACACTGCCCTCCCCATTCCAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: HLKGPGPDAMLH*KRTLPSPFQPS
Trigger: ACTGGGCTGGAATGGGGAGGGCAGTGTTCTCTTCAAATGTAGCATTGCATCTGGCCCTGGTCCCTTCAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR CAA 72 bp GAGTCTCAGTTGGACAGTGGCAGTGACTCGGGTCTGTaGGTCCATTCTGGGACCCACAGTTTGTGCCATTTG +
Preference number: 4 (lower is better)
Translates to: ESQLDSGSDSGL*VHSGTHSLCHL
Trigger: CAAATGGCACAAACTGTGGGTCCCAGAATGGACCAACAGACCCGAGTCACTGCCACTGTCCAACTGAGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR TCA 90 bp CCAGTTCTCAGTTCTCAAGGGGCAATACTGATGGCAGCCAAACTGGGCAAGGATCCACATGCAGTGGAGTaGAGCCCTTGTCATTCGGCT +
Preference number: 4 (lower is better)
Translates to: PVLSSQGAILMAAKLGKDPHAVE*SPCHSA
Trigger: AGCCGAATGACAAGGGCTTCACTCCACTGCATGTGG...ATCCTTGCCCAGTTTGGCTGCCATCAGTATTGCCCCTTGAGAACTGAGAACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR GCA 90 bp GAAGGGTCTCCAGGGGAGACCCCTGTACTGTGTAAACGAAGCCCATCCAGTTCTCCCATCCGAAGCAAGTaGTTCACCACTTCAATCTGG +
Preference number: 4 (lower is better)
Translates to: EGSPGETPVLCKRSPSSSPIRSK*FTTSIW
Trigger: CCAGATTGAAGTGGTGAAGCACTTGCTTCGGATGGG...AGAACTGGATGGGCTTCGTTTACACAGTACAGGGGTCTCCCCTGGAGACCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR GCA 90 bp GCGGCAGCCCTTAAGAGAGGTCACATTGATTGTCGTATAGGGAAGGAGAGGTTAACTTCGGCTTGGTGCTaGAACAGCATCCGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: AAALKRGHIDCRIGKERLTSAWC*NSIRSP
Trigger: TGGGCTCCGGATGCTGTTGCAGCACCAAGCCGAAGT...TAACCTCTCCTTCCCTATACGACAATCAATGTGACCTCTCTTAAGGGCTGCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR GCA 90 bp AAGCCTCAAAAGTTCAAGGAGAAGAGAGCCAAGGAAGGAATGGCCACAGGCTCCTTCACTTCGGCTTGGTaGTGCAACAGCATCCGGAGC +
Preference number: 4 (lower is better)
Translates to: KPQKFKEKRAKEGMATGSFTSAW*CNSIRS
Trigger: GCTCCGGATGCTGTTGCAGCACCAAGCCGAAGTGAA...GGAGCCTGTGGCCATTCCTTCCTTGGCTCTCTTCTCCTTGAACTTTTGAGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR GCA 90 bp AGAGAGCCAAGGAAGGAATGGCCACAGGCTCCCCTCTCCCAAAAGAAGTTAAAACACCGTCTTGGCAGCTaGGATGCCGCAGTTCTTGAG +
Preference number: 4 (lower is better)
Translates to: REPRKEWPQAPLSQKKLKHRLGS*DAAVLE
Trigger: CTCAAGAACTGCGGCATCGCAGCTGCCAAGACGGTG...TTTTAACTTCTTTTGGGAGAGGGGAGCCTGTGGCCATTCCTTCCTTGGCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp TGTGTAAACGAAGCCCATCCAGTTCTCAGTTCTCAAGGGGCAATACTGATGGCACGCGTGAAACGCCCATaGATGGCAGCCATGTGCAGG +
Preference number: 4 (lower is better)
Translates to: CVNEAHPVLSSQGAILMARVKRP*MAAMCR
Trigger: CCTGCACATGGCTGCCATCCATGGGCGTTTCACGCG...TGCCATCAGTATTGCCCCTTGAGAACTGAGAACTGGATGGGCTTCGTTTACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp CAAAAGTTCAAGGAGAAGAGAGCCAAGGAAGGAATGGCCACAGGCTCCCCTCTCTTCTGGATGAGGATCTaGGAACGCGTGAAACGCCCA +
Preference number: 4 (lower is better)
Translates to: QKFKEKRAKEGMATGSPLFWMRI*ERVKRP
Trigger: TGGGCGTTTCACGCGTTCCCAGATCCTCATCCAGAA...GAGAGGGGAGCCTGTGGCCATTCCTTCCTTGGCTCTCTTCTCCTTGAACTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp CATGACAAGCCTCAAAAGTTCAAGGAGAAGAGAGCCAAGGAAGGAATGGCCACAGCGGTCCGGCCCTTGTaGTCCCTTACATCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: HDKPQKFKEKRAKEGMATAVRPL*SLTSRF
Trigger: GAACCTGGATGTAAGGGACCACAAGGGCCGGACCGC...TGTGGCCATTCCTTCCTTGGCTCTCTTCTCCTTGAACTTTTGAGGCTTGTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp GGGCAGTGGGTACTCTCAGACATGACAGAAGGTAGAGACAGACACAGGGCATGGAGGGCACATTTCTCATaGCCCTTGCTACAAGCCAAG +
Preference number: 4 (lower is better)
Translates to: GQWVLSDMTEGRDRHRAWRAHFS*PLLQAK
Trigger: CTTGGCTTGTAGCAAGGGCCATGAGAAATGTGCCCT...CCATGCCCTGTGTCTGTCTCTACCTTCTGTCATGTCTGAGAGTACCCACTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR CAA 72 bp TATTCAAGTTCTGTGTCTTGGCCCCTGGCTGAGGTATaGCGTGTGAGGAAGGGACACTGGGTTACGGGATTG +
Preference number: 4 (lower is better)
Translates to: YSSSVSWPLAEV*RVRKGHWVTGL
Trigger: CAATCCCGTAACCCAGTGTCCCTTCCTCACACGCAATACCTCAGCCAGGGGCCAAGACACAGAACTTGAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR GCA 90 bp TGTGTAAACGAAGCCCATCCAGTTCTCAGTTCTCAAGGGGCAATACTGATGGCAACATGCAGTGGTGTCTaGCACAGCTTGTCCCGGGCA +
Preference number: 4 (lower is better)
Translates to: CVNEAHPVLSSQGAILMATCSGV*HSLSRA
Trigger: TGCCCGGGACAAGCTGTGGCAGACACCACTGCATGT...TGCCATCAGTATTGCCCCTTGAGAACTGAGAACTGGATGGGCTTCGTTTACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp TTCCCATGTCTGTTTCCCTGTCTCCTATGTAGCCCTCGCTCTGTCTCCTTTGCTGACATCAGTAGCAACTaGAGGATGGGGACATCGCCT +
Preference number: 4 (lower is better)
Translates to: FPCLFPCLLCSPRSVSFADISSN*RMGTSP
Trigger: AGGCGATGTCCCCATCCTCCAGTTGCTACTGATGTC...AGCAAAGGAGACAGAGCGAGGGCTACATAGGAGACAGGGAAACAGACATGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR TCA 90 bp AAGCCTCAAAAGTTCAAGGAGAAGAGAGCCAAGGAAGGAATGGCCACAGGCTCCGTTTCCCTCCAAGTATaGGAACGGGCTGTGTTCAAG +
Preference number: 4 (lower is better)
Translates to: KPQKFKEKRAKEGMATGSVSLQV*ERAVFK
Trigger: CTTGAACACAGCCCGTTCTCATACTTGGAGGGAAAC...GGAGCCTGTGGCCATTCCTTCCTTGGCTCTCTTCTCCTTGAACTTTTGAGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR TCA 90 bp AAATCAGAAACTAAAAACTGGCTCTTTTCGTGTCACCCTCTGATTCCCATGTCTTCTCAGCGGCCGTCATaGGCGCAGTGCGGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: KSETKNWLFSCHPLIPMSSQRPS*AQCGQC
Trigger: ACACTGGCCGCACTGCGCTCATGACGGCCGCTGAGA...AGACATGGGAATCAGAGGGTGACACGAAAAGAGCCAGTTTTTAGTTTCTGATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR GCA 90 bp AAGTTAAAAGAAAGAAGCAAGGTTAAAGTGCGTGGTGAGGGGGCCAGGCCAGAATTTACAGCTGAGGTCTaGTCCACGTGCCACCAGCAG +
Preference number: 4 (lower is better)
Translates to: KLKERSKVKVRGEGARPEFTAEV*STCHQQ
Trigger: CTGCTGGTGGCACGTGGAGCAGACCTCAGCTGTAAA...TTCTGGCCTGGCCCCCTCACCACGCACTTTAACCTTGCTTCTTTCTTTTAACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR GCA 90 bp GGGAGACCCCTGTACTGTGTAAACGAAGCCCATCCAGTTCTCAGTTCTCAAGGGGAGAGGCATCTGCAGTaGACTGTTGGTAGCATTGAT +
Preference number: 4 (lower is better)
Translates to: GRPLYCVNEAHPVLSSQGERHLQ*TVGSID
Trigger: ATCAATGCTACCAACAGTGCACTGCAGATGCCTCTC...CCCTTGAGAACTGAGAACTGGATGGGCTTCGTTTACACAGTACAGGGGTCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp AAGTTAAAAGAAAGAAGCAAGGTTAAAGTGCGTGGTGAGGGGGCCAGGCCAGAACCCTTGTCATTCGGCTaGTTCACATTGGCTCCTGCG +
Preference number: 4 (lower is better)
Translates to: KLKERSKVKVRGEGARPEPLSFG*FTLAPA
Trigger: CGCAGGAGCCAATGTGAACCAGCCGAATGACAAGGG...TTCTGGCCTGGCCCCCTCACCACGCACTTTAACCTTGCTTCTTTCTTTTAACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR CAA 72 bp TTGAAGAGAACACTGCCCTCCCCATTCCAGCCCAGTTaGGCTTCTCGGGTACATTCCAGAACCTTATCAGTG +
Preference number: 4 (lower is better)
Translates to: LKRTLPSPFQPS*ASRVHSRTLSV
Trigger: CACTGATAAGGTTCTGGAATGTACCCGAGAAGCCAAACTGGGCTGGAATGGGGAGGGCAGTGTTCTCTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR TCA 90 bp AGAGAGCCAAGGAAGGAATGGCCACAGGCTCCCCTCTCCCAAAAGAAGTTAAAACTAAGTGCAAAGGGCTaGCTGGAACTGTACTCTCCA +
Preference number: 4 (lower is better)
Translates to: REPRKEWPQAPLSQKKLKLSAKG*LELYSP
Trigger: TGGAGAGTACAGTTCCAGTCAGCCCTTTGCACTTAG...TTTTAACTTCTTTTGGGAGAGGGGAGCCTGTGGCCATTCCTTCCTTGGCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp ACAGGGCATCTGAAGGGACCAGGGCCAGATGCAATGCTACATTTGAAGAGAACATGTTTCCAAAAGCATTaGGCTCATCGATCTCGGCCC +
Preference number: 4 (lower is better)
Translates to: TGHLKGPGPDAMLHLKRTCFQKH*AHRSRP
Trigger: GGGCCGAGATCGATGAGCCCAATGCTTTTGGAAACA...TGTTCTCTTCAAATGTAGCATTGCATCTGGCCCTGGTCCCTTCAGATGCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp ACAGGGCATCTGAAGGGACCAGGGCCAGATGCAATGCTACATTTGAAGAGAACAGTGCAAAGGGCTGACTaGAACTGTACTCTCCACATC +
Preference number: 4 (lower is better)
Translates to: TGHLKGPGPDAMLHLKRTVQRAD*NCTLHI
Trigger: GATGTGGAGAGTACAGTTCCAGTCAGCCCTTTGCAC...TGTTCTCTTCAAATGTAGCATTGCATCTGGCCCTGGTCCCTTCAGATGCCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp CCAGTTCTCAGTTCTCAAGGGGCAATACTGATGGCAGCCAAACTGGGCAAGGATTGTACACAGTCCACATaGCCATTCATAATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PVLSSQGAILMAAKLGKDCTQST*PFIMAS
Trigger: GCTGGCCATTATGAATGGCCATGTGGACTGTGTACA...ATCCTTGCCCAGTTTGGCTGCCATCAGTATTGCCCCTTGAGAACTGAGAACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp TTCCCATGTCTGTTTCCCTGTCTCCTATGTAGCCCTCGCTCTGTCTCCTTTGCTATAAGGCCAAGGTCTTaGGTTTCTGCCAGGATCATG +
Preference number: 4 (lower is better)
Translates to: FPCLFPCLLCSPRSVSFAIRPRS*VSARIM
Trigger: CATGATCCTGGCAGAAACCCAAGACCTTGGCCTTAT...AGCAAAGGAGACAGAGCGAGGGCTACATAGGAGACAGGGAAACAGACATGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp AGAGAGCCAAGGAAGGAATGGCCACAGGCTCCCCTCTCCCAAAAGAAGTTAAAAGTGGGAAAGGCTTCATaGTGGAAAGGATCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: REPRKEWPQAPLSQKKLKVGKAS*WKGSRP
Trigger: TGGCCTTGATCCTTTCCACCATGAAGCCTTTCCCAC...TTTTAACTTCTTTTGGGAGAGGGGAGCCTGTGGCCATTCCTTCCTTGGCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR GCA 90 bp TGTGTAAACGAAGCCCATCCAGTTCTCAGTTCTCAAGGGGCAATACTGATGGCATGTCACCAGTGTCACTaGGCACTGGTAGCTACCATT +
Preference number: 4 (lower is better)
Translates to: CVNEAHPVLSSQGAILMACHQCH*ALVATI
Trigger: AATGGTAGCTACCAGTGCGCAGTGACACTGGTGACA...TGCCATCAGTATTGCCCCTTGAGAACTGAGAACTGGATGGGCTTCGTTTACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR TCA 90 bp AAGTTAAAAGAAAGAAGCAAGGTTAAAGTGCGTGGTGAGGGGGCCAGGCCAGAACTCAACATTTCCTCCTaGAGCAGCAGCATGAAGACA +
Preference number: 4 (lower is better)
Translates to: KLKERSKVKVRGEGARPELNISS*SSSMKT
Trigger: TGTCTTCATGCTGCTGCTTCAGGAGGAAATGTTGAG...TTCTGGCCTGGCCCCCTCACCACGCACTTTAACCTTGCTTCTTTCTTTTAACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CCA 90 bp AAGTTAAAAGAAAGAAGCAAGGTTAAAGTGCGTGGTGAGGGGGCCAGGCCAGAAAGCTGCATAGTGCAGTaGGGTCCTTCCAAATTTGTC +
Preference number: 4 (lower is better)
Translates to: KLKERSKVKVRGEGARPESCIVQ*GPSKFV
Trigger: GACAAATTTGGAAGGACCCCACTGCACTATGCAGCT...TTCTGGCCTGGCCCCCTCACCACGCACTTTAACCTTGCTTCTTTCTTTTAACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
3UTR CAA 72 bp TTCTGGGCCGGGTTCAGTAGTTGCTGCTTCAAGTGTTaGCATTTGAATTTTAGGGGTGATAGGATATGGGGG +
Preference number: 4 (lower is better)
Translates to: FWAGFSSCCFKC*HLNFRGDRIWG
Trigger: CCCCCATATCCTATCACCCCTAAAATTCAAATGCAAACACTTGAAGCAGCAACTACTGAACCCGGCCCAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS GCA 90 bp GCTGCGCCCGCTCCTGTCAGCCACATTGAGACTGCTCAACAGGGGTaGCAGAGCCTCTGCACACTTGGTGGCCCGGTTGGCAGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: AAPAPVSHIETAQQG*QSLCTLGGPVGSSH
Trigger: GTGGCTGCTGCCAACCGGGCCACCAAGTGTGCAGAGGCTCTGGCACCCCTGTTGAGCAGTCTCAATGTGGCTGACAGGAGCGGGCGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS GCA 90 bp GGCCCCGTGAGGCAGGGCGCCACAGCCACCCACCGTCTTGGCAGCTaGGATGCCGCAGTTCTTGAGCAGGCTGAAGCTGAAAGGACTGAC +
Preference number: 5 (lower is better)
Translates to: GPVRQGATATHRLGS*DAAVLEQAEAERTD
Trigger: GTCAGTCCTTTCAGCTTCAGCCTGCTCAAGAACTGCGGCATCGCAGCTGCCAAGACGGTGGGTGGCTGTGGCGCCCTGCCTCACGGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS GCA 90 bp GCAGTGCGGCCAGTGTGGTCGGTGGCATTCACTTCGGCTTGGTGCTaGAACAGCATCCGGAGCCCAGAGACGTTGTCCGCGAAGGCAGCG +
Preference number: 5 (lower is better)
Translates to: AVRPVWSVAFTSAWC*NSIRSPETLSAKAA
Trigger: CGCTGCCTTCGCGGACAACGTCTCTGGGCTCCGGATGCTGTTGCAGCACCAAGCCGAAGTGAATGCCACCGACCACACTGGCCGCACTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS GCA 90 bp GCCAGAGCCTCTGCACACTTGGTGGCCCGGTTGGCAGCAGCCACATaGAGTGGTGTCTGCCACAGCTTGTCCCGGGCATTCACATCCGCT +
Preference number: 5 (lower is better)
Translates to: ARASAHLVARLAAAT*SGVCHSLSRAFTSA
Trigger: AGCGGATGTGAATGCCCGGGACAAGCTGTGGCAGACACCACTGCATGTGGCTGCTGCCAACCGGGCCACCAAGTGTGCAGAGGCTCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS GCA 90 bp AGCGCAGTGCGGCCAGTGTGGTCGGTGGCATTCACTTCGGCTTGGTaGTGCAACAGCATCCGGAGCCCAGAGACGTTGTCCGCGAAGGCA +
Preference number: 5 (lower is better)
Translates to: SAVRPVWSVAFTSAW*CNSIRSPETLSAKA
Trigger: TGCCTTCGCGGACAACGTCTCTGGGCTCCGGATGCTGTTGCAGCACCAAGCCGAAGTGAATGCCACCGACCACACTGGCCGCACTGCGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CCA 90 bp GGGTTCCGCTCTCCGGTAGGTGTCAGAGGCAGCAGCATAGTGAAGTaGCGAACAGCCCTTACAGTCGGCCTCATTGACACCGGCCCCGGC +
Preference number: 5 (lower is better)
Translates to: GFRSPVGVRGSSIVK*RTALTVGLIDTGPG
Trigger: GCCGGGGCCGGTGTCAATGAGGCCGACTGTAAGGGCTGTTCGCCACTTCACTATGCTGCTGCCTCTGACACCTACCGGAGAGCGGAACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CAA 90 bp CAGGGGGCCACGGGTGGGGGAGGTAGCCCGTCAATCTCAGAGTCTCAGTTGGACAGGGGAGTCCGTCCTTaGGCGTCTCGGCTGTTCACA +
Preference number: 5 (lower is better)
Translates to: QGATGGGGSPSISESQLDRGVRP*ASRLFT
Trigger: TGTGAACAGCCGAGACGCCAAAGGACGGACTCCCCT...GTCCAACTGAGACTCTGAGATTGACGGGCTACCTCCCCCACCCGTGGCCCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS GCA 90 bp GCACACTTGGTGGCCCGGTTGGCAGCAGCCACATGCAGTGGTGTCTaGCACAGCTTGTCCCGGGCATTCACATCCGCTGAGTGTGCCAAC +
Preference number: 5 (lower is better)
Translates to: AHLVARLAAATCSGV*HSLSRAFTSAECAN
Trigger: GTTGGCACACTCAGCGGATGTGAATGCCCGGGACAAGCTGTGGCAGACACCACTGCATGTGGCTGCTGCCAACCGGGCCACCAAGTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CCA 90 bp GTGGAGCCTCGCTCAGTGGCCAGAAAGAGCGCGGTCCGGCCCTTGTaGTCCCTTACATCCAGGTTCACCAGCGTCTCAGCCAGTGTCTTC +
Preference number: 5 (lower is better)
Translates to: VEPRSVARKSAVRPL*SLTSRFTSVSASVF
Trigger: GAAGACACTGGCTGAGACGCTGGTGAACCTGGATGTAAGGGACCACAAGGGCCGGACCGCGCTCTTTCTGGCCACTGAGCGAGGCTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CCA 90 bp CATGGGCCGTCAGTACCTCCACACACTCAGTGGAGCCTCGCTCAGTaGCCAGAAAGAGCGCGGTCCGGCCCTTGTGGTCCCTTACATCCA +
Preference number: 5 (lower is better)
Translates to: HGPSVPPHTQWSLAQ*PERARSGPCGPLHP
Trigger: TGGATGTAAGGGACCACAAGGGCCGGACCGCGCTCTTTCTGGCCACTGAGCGAGGCTCCACTGAGTGTGTGGAGGTACTGACGGCCCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CCA 90 bp CACGGTGGAGGGCAGTGCGGCCCCGGAGGTCAGCAGCATCAGCCGTaGATCCCTTCTCTAGCAGCAGATGTACACAGTCCACATGGCCAT +
Preference number: 5 (lower is better)
Translates to: HGGGQCGPGGQQHQP*IPSLAADVHSPHGH
Trigger: ATGGCCATGTGGACTGTGTACATCTGCTGCTAGAGAAGGGATCCACGGCTGATGCTGCTGACCTCCGGGGCCGCACTGCCCTCCACCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CCA 90 bp ATGAGCGCAGTGCGGCCAGTGTGGTCGGTGGCATTCACTTCGGCTTaGTGCTGCAACAGCATCCGGAGCCCAGAGACGTTGTCCGCGAAG +
Preference number: 5 (lower is better)
Translates to: MSAVRPVWSVAFTSA*CCNSIRSPETLSAK
Trigger: CTTCGCGGACAACGTCTCTGGGCTCCGGATGCTGTTGCAGCACCAAGCCGAAGTGAATGCCACCGACCACACTGGCCGCACTGCGCTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CAA 90 bp CCCAGACCTCTGCCAGGCCAGGATGGTGTGGCAAAGGGTAAACAGCTGCTCCCCGGACTGACGGCGTCCTaGGGTGGGAAAGGCTTCATG +
Preference number: 5 (lower is better)
Translates to: PRPLPGQDGVAKGKQLLPGLTAS*GGKGFM
Trigger: CATGAAGCCTTTCCCACCCAAGGACGCCGTCAGTCC...GGGGAGCAGCTGTTTACCCTTTGCCACACCATCCTGGCCTGGCAGAGGTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS TCA 90 bp ATGCAGTGGTGTCTGCCACAGCTTGTCCCGGGCATTCACATCCGCTaGGTGTGCCAACAGCAGCCCCAGCACCTTCTCGTTTCGGGAGGC +
Preference number: 5 (lower is better)
Translates to: MQWCLPQLVPGIHIR*VCQQQPQHLLVSGG
Trigger: GCCTCCCGAAACGAGAAGGTGCTGGGGCTGCTGTTGGCACACTCAGCGGATGTGAATGCCCGGGACAAGCTGTGGCAGACACCACTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS TCA 90 bp GTACTGCATGGTGTAGAGCGCTGCGCCCGCTCCTGTCAGCCACATTaGGACTGCTCAACAGGGGTGCCAGAGCCTCTGCACACTTGGTGG +
Preference number: 5 (lower is better)
Translates to: VLHGVERCARSCQPH*DCSTGVPEPLHTWW
Trigger: CCACCAAGTGTGCAGAGGCTCTGGCACCCCTGTTGAGCAGTCTCAATGTGGCTGACAGGAGCGGGCGCAGCGCTCTACACCATGCAGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS GCA 90 bp CCTGTCAGCCACATTGAGACTGCTCAACAGGGGTGCCAGAGCCTCTaGACACTTGGTGGCCCGGTTGGCAGCAGCCACATGCAGTGGTGT +
Preference number: 5 (lower is better)
Translates to: PVSHIETAQQGCQSL*TLGGPVGSSHMQWC
Trigger: ACACCACTGCATGTGGCTGCTGCCAACCGGGCCACCAAGTGTGCAGAGGCTCTGGCACCCCTGTTGAGCAGTCTCAATGTGGCTGACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CCA 90 bp TGGGCGAGTATCCGCTGTAATCGACACCAGCATCTAGGGGGTCTGTaGAAAGGGCAGCCTGCAGCAGAGTCCGCAGCACTGCAGTGTGGC +
Preference number: 5 (lower is better)
Translates to: WASIRCNRHQHLGGL*KGQPAAESAALQCG
Trigger: GCCACACTGCAGTGCTGCGGACTCTGCTGCAGGCTGCCCTTTCCACAGACCCCCTAGATGCTGGTGTCGATTACAGCGGATACTCGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CAA 90 bp GAAGGGTCTCCAGGGGAGACCCCTGTACTGTGTAAACGAAGCCCATCCAGTTCTCAGCCACCCACCGTCTaGGCAGCTGCGATGCCGCAG +
Preference number: 5 (lower is better)
Translates to: EGSPGETPVLCKRSPSSSQPPTV*AAAMPQ
Trigger: CTGCGGCATCGCAGCTGCCAAGACGGTGGGTGGCTG...AGAACTGGATGGGCTTCGTTTACACAGTACAGGGGTCTCCCCTGGAGACCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS TCA 90 bp GCAGAAATTCCACAGCAGCAGTCTGTCCACTCTCAGCGGCCGTCATaGGCGCAGTGCGGCCAGTGTGGTCGGTGGCATTCACTTCGGCTT +
Preference number: 5 (lower is better)
Translates to: AEIPQQQSVHSQRPS*AQCGQCGRWHSLRL
Trigger: AAGCCGAAGTGAATGCCACCGACCACACTGGCCGCACTGCGCTCATGACGGCCGCTGAGAGTGGACAGACTGCTGCTGTGGAATTTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000014642.10
ENSMUST00000166577.2
CDS CCA 90 bp GGTGTCCACTTGCGTTTTCGCTCCTTGATGAGGGCAGAGGCACCATaGGCCGTCAGTACCTCCACACACTCAGTGGAGCCTCGCTCAGTG +
Preference number: 5 (lower is better)
Translates to: GVHLRFRSLMRAEAP*AVSTSTHSVEPRSV
Trigger: CACTGAGCGAGGCTCCACTGAGTGTGTGGAGGTACTGACGGCCCATGGTGCCTCTGCCCTCATCAAGGAGCGAAAACGCAAGTGGACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CAA 90 bp GGGCAGTGGGTACTCTCAGACATGACAGAAGGTAGAGACAGACACAGGGCATGGAGCGCGGTCCGGCCCTaGTGGTCCCTTACATCCAGG +
Preference number: 5 (lower is better)
Translates to: GQWVLSDMTEGRDRHRAWSAVRP*WSLTSR
Trigger: CCTGGATGTAAGGGACCACAAGGGCCGGACCGCGCT...CCATGCCCTGTGTCTGTCTCTACCTTCTGTCATGTCTGAGAGTACCCACTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CAA 90 bp GAGCCACAGTGTCAGTCTGTCGCTCCCTTGACCAGTGATCCCCCTCCCACGGAGGCGATGCCGCAGTTCTaGAGCAGGCTGAAGCTGAAA +
Preference number: 5 (lower is better)
Translates to: EPQCQSVAPLTSDPPPTEAMPQF*SRLKLK
Trigger: TTTCAGCTTCAGCCTGCTCAAGAACTGCGGCATCGC...CTCCGTGGGAGGGGGATCACTGGTCAAGGGAGCGACAGACTGACACTGTGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CAA 90 bp AAAGGTGAGCTGGACTTACAGTCAGAACGGATAGGGGTGAGGAAGGAGGAGGGGTTACAGTCGGCCTCATaGACACCGGCCCCGGCTGTC +
Preference number: 5 (lower is better)
Translates to: KGELDLQSERIGVRKEEGLQSAS*TPAPAV
Trigger: GACAGCCGGGGCCGGTGTCAATGAGGCCGACTGTAA...CCCCTCCTCCTTCCTCACCCCTATCCGTTCTGACTGTAAGTCCAGCTCACCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CAA 90 bp AAGTTAAAAGAAAGAAGCAAGGTTAAAGTGCGTGGTGAGGGGGCCAGGCCAGAACGGAGCCCAGAGACGTaGTCCGCGAAGGCAGCGGCG +
Preference number: 5 (lower is better)
Translates to: KLKERSKVKVRGEGARPERSPET*SAKAAA
Trigger: CGCCGCTGCCTTCGCGGACAACGTCTCTGGGCTCCG...TTCTGGCCTGGCCCCCTCACCACGCACTTTAACCTTGCTTCTTTCTTTTAACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CCA 90 bp TTCAGGAGCAGGTTCACTGTCTCAAGATGCCCACTGTGTACTGCATaGTGTAGAGCGCTGCGCCCGCTCCTGTCAGCCACATTGAGACTG +
Preference number: 5 (lower is better)
Translates to: FRSRFTVSRCPLCTA*CRALRPLLSATLRL
Trigger: CAGTCTCAATGTGGCTGACAGGAGCGGGCGCAGCGCTCTACACCATGCAGTACACAGTGGGCATCTTGAGACAGTGAACCTGCTCCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CCA 90 bp GAGACAGCCGCCACATGCAGTGGAGTGAAGCCCTTGTCATTCGGCTaGTTCACATTGGCTCCTGCGTTCACAAGCTCGATAGCCACAGCA +
Preference number: 5 (lower is better)
Translates to: ETAATCSGVKPLSFG*FTLAPAFTSSIATA
Trigger: TGCTGTGGCTATCGAGCTTGTGAACGCAGGAGCCAATGTGAACCAGCCGAATGACAAGGGCTTCACTCCACTGCATGTGGCGGCTGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CCA 90 bp GTTCTTGAGCAGGCTGAAGCTGAAAGGACTGACGGCGTCCTTGGGTaGGAAAGGCTTCATGGTGGAAAGGATCAAGGCCAGGCAGTCTGC +
Preference number: 5 (lower is better)
Translates to: VLEQAEAERTDGVLG*ERLHGGKDQGQAVC
Trigger: GCAGACTGCCTGGCCTTGATCCTTTCCACCATGAAGCCTTTCCCACCCAAGGACGCCGTCAGTCCTTTCAGCTTCAGCCTGCTCAAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000014642.10
ENSMUST00000166577.2
CDS TCA 90 bp CTGCAGCTGTGTGGAGCAGCCCGTAGCCCTTTCGATCTTTACAGCTaGGGTCTGCTCCACGTGCCACCAGCAGTTTCAGGACCTCTAAAT +
Preference number: 5 (lower is better)
Translates to: LQLCGAARSPFDLYS*GLLHVPPAVSGPLN
Trigger: ATTTAGAGGTCCTGAAACTGCTGGTGGCACGTGGAGCAGACCTCAGCTGTAAAGATCGAAAGGGCTACGGGCTGCTCCACACAGCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS GCA 90 bp AGAAGCTTCCGGCAACAGTCAGAGAATCCAAAGAGAACAGCTAAGTaGAGGGGGAACATGTCGTGGATACCGCGCCGGGCAGTATCTGCG +
Preference number: 5 (lower is better)
Translates to: RSFRQQSENPKRTAK*RGNMSWIPRRAVSA
Trigger: CGCAGATACTGCCCGGCGCGGTATCCACGACATGTTCCCCCTGCACTTAGCTGTTCTCTTTGGATTCTCTGACTGTTGCCGGAAGCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CAA 90 bp TTCCCATGTCTGTTTCCCTGTCTCCTATGTAGCCCTCGCTCTGTCTCCTTTGCTGGTGTCTGCCACAGCTaGTCCCGGGCATTCACATCC +
Preference number: 5 (lower is better)
Translates to: FPCLFPCLLCSPRSVSFAGVCHS*SRAFTS
Trigger: GGATGTGAATGCCCGGGACAAGCTGTGGCAGACACC...AGCAAAGGAGACAGAGCGAGGGCTACATAGGAGACAGGGAAACAGACATGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CAA 90 bp GGCAGTGACTCGGGTCTGTTGGTCCATTCTGGGACCCACAGTTTGTGCCATTTGTTCGGCTGGTTCACATaGGCTCCTGCGTTCACAAGC +
Preference number: 5 (lower is better)
Translates to: GSDSGLLVHSGTHSLCHLFGWFT*APAFTS
Trigger: GCTTGTGAACGCAGGAGCCAATGTGAACCAGCCGAA...CAAATGGCACAAACTGTGGGTCCCAGAATGGACCAACAGACCCGAGTCACTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CCA 90 bp CAACTGGAGGATGGGGACATCGCCTACGTAGGCAGCAGCATGCAATaGGGTTCGCCTCTCTTGGTCCAGTACATTGATGTTCTCCTTCTG +
Preference number: 5 (lower is better)
Translates to: QLEDGDIAYVGSSMQ*GSPLLVQYIDVLLL
Trigger: CAGAAGGAGAACATCAATGTACTGGACCAAGAGAGGCGAACCCCATTGCATGCTGCTGCCTACGTAGGCGATGTCCCCATCCTCCAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CAA 90 bp GATAAAGGAGAACACGACCGATGCCCCAGTCATCCTGGGGAAAGCTTCCCTGCTGCAGTATCTGCGCCATaGGTCATGAGAGTGCTGATG +
Preference number: 5 (lower is better)
Translates to: DKGEHDRCPSHPGESFPAAVSAP*VMRVLM
Trigger: CATCAGCACTCTCATGACCAATGGCGCAGATACTGC...AGCAGGGAAGCTTTCCCCAGGATGACTGGGGCATCGGTCGTGTTCTCCTTTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CAA 90 bp GGGAGACCCCTGTACTGTGTAAACGAAGCCCATCCAGTTCTCAGTTCTCAAGGGAGGCTGTCCGGTGTGTaGATGTCAAACCCAGCGGAA +
Preference number: 5 (lower is better)
Translates to: GRPLYCVNEAHPVLSSQGRLSGV*MSNPAE
Trigger: TTCCGCTGGGTTTGACATCAACACACCGGACAGCCT...CCCTTGAGAACTGAGAACTGGATGGGCTTCGTTTACACAGTACAGGGGTCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS GCA 90 bp GGCTGTCACCAGTGTCACTGCGCACTGGTAGCTACCATTAGCAGCTaGATAGTGCAGTGGGGTCCTTCCAAATTTGTCTCTCCTTCTCAG +
Preference number: 5 (lower is better)
Translates to: GCHQCHCALVATISS*IVQWGPSKFVSPSQ
Trigger: CTGAGAAGGAGAGACAAATTTGGAAGGACCCCACTGCACTATGCAGCTGCTAATGGTAGCTACCAGTGCGCAGTGACACTGGTGACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CAA 90 bp GGCAGTGACTCGGGTCTGTTGGTCCATTCTGGGACCCACAGTTTGTGCCATTTGAGTGTGTCCTTAGCGTaGACGTTAGCACCTGACATC +
Preference number: 5 (lower is better)
Translates to: GSDSGLLVHSGTHSLCHLSVSLA*TLAPDI
Trigger: GATGTCAGGTGCTAACGTCAACGCTAAGGACACACT...CAAATGGCACAAACTGTGGGTCCCAGAATGGACCAACAGACCCGAGTCACTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CAA 90 bp CAAAAGTTCAAGGAGAAGAGAGCCAAGGAAGGAATGGCCACAGGCTCCCCTCTCGTGTTTCCAAAAGCATaGGGCTCATCGATCTCGGCC +
Preference number: 5 (lower is better)
Translates to: QKFKEKRAKEGMATGSPLVFPKA*GSSISA
Trigger: GGCCGAGATCGATGAGCCCAATGCTTTTGGAAACAC...GAGAGGGGAGCCTGTGGCCATTCCTTCCTTGGCTCTCTTCTCCTTGAACTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CAA 90 bp GGCAGTGACTCGGGTCTGTTGGTCCATTCTGGGACCCACAGTTTGTGCCATTTGGCACTGTTGGTAGCATaGATAAGGCCAAGGTCTTGG +
Preference number: 5 (lower is better)
Translates to: GSDSGLLVHSGTHSLCHLALLVA*IRPRSW
Trigger: CCAAGACCTTGGCCTTATCAATGCTACCAACAGTGC...CAAATGGCACAAACTGTGGGTCCCAGAATGGACCAACAGACCCGAGTCACTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CAA 90 bp GCGGCAGCCCTTAAGAGAGGTCACATTGATTGTCGTATAGGGAAGGAGAGGTTAACAGAAGCCAGACCGTaGCGGGCAGCAATGTGGAGA +
Preference number: 5 (lower is better)
Translates to: AAALKRGHIDCRIGKERLTEARP*RAAMWR
Trigger: TCTCCACATTGCTGCCCGCAACGGTCTGGCTTCTGT...TAACCTCTCCTTCCCTATACGACAATCAATGTGACCTCTCTTAAGGGCTGCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS GCA 90 bp AATGGGGTTCGCCTCTCTTGGTCCAGTACATTGATGTTCTCCTTCTaGGAGAGGAGGGAACGCACTTCCTCCACATCTCGGCTAAAGATG +
Preference number: 5 (lower is better)
Translates to: NGVRLSWSSTLMFSF*ERRERTSSTSRLKM
Trigger: CATCTTTAGCCGAGATGTGGAGGAAGTGCGTTCCCTCCTCTCGCAGAAGGAGAACATCAATGTACTGGACCAAGAGAGGCGAACCCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS GCA 90 bp TTCAGGACCTCTAAATGCCCTAGAAAAGCTGCCCAGTGCAGCGGCTaGCGTTCCTTTTTATCGCAGACATTCAGGCTGGCTCCCTTATTC +
Preference number: 5 (lower is better)
Translates to: FRTSKCPRKAAQCSG*RSFLSQTFRLAPLF
Trigger: GAATAAGGGAGCCAGCCTGAATGTCTGCGATAAAAAGGAACGGCAGCCGCTGCACTGGGCAGCTTTTCTAGGGCATTTAGAGGTCCTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CCA 90 bp GGCATCTGCAGTGCACTGTTGGTAGCATTGATAAGGCCAAGGTCTTaGGTTTCTGCCAGGATCATGAGGGCACATTTCTCATGGCCCTTG +
Preference number: 5 (lower is better)
Translates to: GICSALLVALIRPRS*VSARIMRAHFSWPL
Trigger: CAAGGGCCATGAGAAATGTGCCCTCATGATCCTGGCAGAAACCCAAGACCTTGGCCTTATCAATGCTACCAACAGTGCACTGCAGATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000014642.10
ENSMUST00000166577.2
CDS-3UTR CAA 90 bp GCGGCAGCCCTTAAGAGAGGTCACATTGATTGTCGTATAGGGAAGGAGAGGTTACTCCTGTCAGCCACATaGAGACTGCTCAACAGGGGT +
Preference number: 5 (lower is better)
Translates to: AAALKRGHIDCRIGKERLLLSAT*RLLNRG
Trigger: ACCCCTGTTGAGCAGTCTCAATGTGGCTGACAGGAG...TAACCTCTCCTTCCCTATACGACAATCAATGTGACCTCTCTTAAGGGCTGCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS GCA 90 bp CAGTGCACTGTTGGTAGCATTGATAAGGCCAAGGTCTTGGGTTTCTaGCAGGATCATGAGGGCACATTTCTCATGGCCCTTGCTACAAGC +
Preference number: 5 (lower is better)
Translates to: QCTVGSIDKAKVLGF*QDHEGTFLMALATS
Trigger: GCTTGTAGCAAGGGCCATGAGAAATGTGCCCTCATGATCCTGGCAGAAACCCAAGACCTTGGCCTTATCAATGCTACCAACAGTGCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000014642.10
ENSMUST00000166577.2
CDS-3UTR CAA 90 bp GCGGCAGCCCTTAAGAGAGGTCACATTGATTGTCGTATAGGGAAGGAGAGGTTAGAAAGCACATGCTCGTaGCTGAGCGAAGACACGATG +
Preference number: 5 (lower is better)
Translates to: AAALKRGHIDCRIGKERLESTCS*LSEDTM
Trigger: CATCGTGTCTTCGCTCAGCAACGAGCATGTGCTTTC...TAACCTCTCCTTCCCTATACGACAATCAATGTGACCTCTCTTAAGGGCTGCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CAA 90 bp CCAGTTCTCAGTTCTCAAGGGGCAATACTGATGGCAGCCAAACTGGGCAAGGATGGGGTCCTTCCAAATTaGTCTCTCCTTCTCAGGTCA +
Preference number: 5 (lower is better)
Translates to: PVLSSQGAILMAAKLGKDGVLPN*SLLLRS
Trigger: TGACCTGAGAAGGAGAGACAAATTTGGAAGGACCCC...ATCCTTGCCCAGTTTGGCTGCCATCAGTATTGCCCCTTGAGAACTGAGAACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CAA 90 bp AAGTTAAAAGAAAGAAGCAAGGTTAAAGTGCGTGGTGAGGGGGCCAGGCCAGAATTGCGTTTTCGCTCCTaGATGAGGGCAGAGGCACCA +
Preference number: 5 (lower is better)
Translates to: KLKERSKVKVRGEGARPELRFRS*MRAEAP
Trigger: TGGTGCCTCTGCCCTCATCAAGGAGCGAAAACGCAA...TTCTGGCCTGGCCCCCTCACCACGCACTTTAACCTTGCTTCTTTCTTTTAACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CAA 90 bp ACAGGGCATCTGAAGGGACCAGGGCCAGATGCAATGCTACATTTGAAGAGAACACAGCATCAGTGGGGTTaGTCCATAGGCATCCATGAC +
Preference number: 5 (lower is better)
Translates to: TGHLKGPGPDAMLHLKRTQHQWG*SIGIHD
Trigger: GTCATGGATGCCTATGGACAAACCCCACTGATGCTG...TGTTCTCTTCAAATGTAGCATTGCATCTGGCCCTGGTCCCTTCAGATGCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CAA 90 bp AAATCAGAAACTAAAAACTGGCTCTTTTCGTGTCACCCTCTGATTCCCATGTCTAGAGCCTCTGCACACTaGGTGGCCCGGTTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: KSETKNWLFSCHPLIPMSRASAH*VARLAA
Trigger: TGCTGCCAACCGGGCCACCAAGTGTGCAGAGGCTCT...AGACATGGGAATCAGAGGGTGACACGAAAAGAGCCAGTTTTTAGTTTCTGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CAA 90 bp CATGACAAGCCTCAAAAGTTCAAGGAGAAGAGAGCCAAGGAAGGAATGGCCACAAGTGGAGTGAAGCCCTaGTCATTCGGCTGGTTCACA +
Preference number: 5 (lower is better)
Translates to: HDKPQKFKEKRAKEGMATSGVKP*SFGWFT
Trigger: TGTGAACCAGCCGAATGACAAGGGCTTCACTCCACT...TGTGGCCATTCCTTCCTTGGCTCTCTTCTCCTTGAACTTTTGAGGCTTGTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CAA 90 bp AGAGAGCCAAGGAAGGAATGGCCACAGGCTCCCCTCTCCCAAAAGAAGTTAAAAGATAAGGCCAAGGTCTaGGGTTTCTGCCAGGATCAT +
Preference number: 5 (lower is better)
Translates to: REPRKEWPQAPLSQKKLKDKAKV*GFCQDH
Trigger: ATGATCCTGGCAGAAACCCAAGACCTTGGCCTTATC...TTTTAACTTCTTTTGGGAGAGGGGAGCCTGTGGCCATTCCTTCCTTGGCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CAA 90 bp TGGACAGGGCATCTGAAGGGACCAGGGCCAGATGCAATGCTACATTTGAAGAGAATCTGCAGTGCACTGTaGGTAGCATTGATAAGGCCA +
Preference number: 5 (lower is better)
Translates to: WTGHLKGPGPDAMLHLKRICSAL*VALIRP
Trigger: TGGCCTTATCAATGCTACCAACAGTGCACTGCAGAT...TCTCTTCAAATGTAGCATTGCATCTGGCCCTGGTCCCTTCAGATGCCCTGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CAA 90 bp GCGGCAGCCCTTAAGAGAGGTCACATTGATTGTCGTATAGGGAAGGAGAGGTTATCTTGGTCCAGTACATaGATGTTCTCCTTCTGCGAG +
Preference number: 5 (lower is better)
Translates to: AAALKRGHIDCRIGKERLSWSST*MFSFCE
Trigger: CTCGCAGAAGGAGAACATCAATGTACTGGACCAAGA...TAACCTCTCCTTCCCTATACGACAATCAATGTGACCTCTCTTAAGGGCTGCCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS-3UTR CAA 90 bp AAATCAGAAACTAAAAACTGGCTCTTTTCGTGTCACCCTCTGATTCCCATGTCTAGACACAGAGCGCCGTaGGTAGAGACAGCCGCCACA +
Preference number: 5 (lower is better)
Translates to: KSETKNWLFSCHPLIPMSRHRAP*VETAAT
Trigger: TGTGGCGGCTGTCTCTACCAACGGCGCTCTGTGTCT...AGACATGGGAATCAGAGGGTGACACGAAAAGAGCCAGTTTTTAGTTTCTGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CAA 72 bp AGGGGTGCCAGAGCCTCTGCACACTTGGTGGCCCGGTaGGCAGCAGCCACATGCAGTGGTGTCTGCCACAGC +
Preference number: 6 (lower is better)
Translates to: RGARASAHLVAR*AAATCSGVCHS
Trigger: GCTGTGGCAGACACCACTGCATGTGGCTGCTGCCAACCGGGCCACCAAGTGTGCAGAGGCTCTGGCACCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CAA 90 bp GTGGCCCGGTTGGCAGCAGCCACATGCAGTGGTGTCTGCCACAGCTaGTCCCGGGCATTCACATCCGCTGAGTGTGCCAACAGCAGCCCC +
Preference number: 6 (lower is better)
Translates to: VARLAAATCSGVCHS*SRAFTSAECANSSP
Trigger: GGGGCTGCTGTTGGCACACTCAGCGGATGTGAATGCCCGGGACAAGCTGTGGCAGACACCACTGCATGTGGCTGCTGCCAACCGGGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CAA 90 bp CTGCTCAACAGGGGTGCCAGAGCCTCTGCACACTTGGTGGCCCGGTaGGCAGCAGCCACATGCAGTGGTGTCTGCCACAGCTTGTCCCGG +
Preference number: 6 (lower is better)
Translates to: LLNRGARASAHLVAR*AAATCSGVCHSLSR
Trigger: CCGGGACAAGCTGTGGCAGACACCACTGCATGTGGCTGCTGCCAACCGGGCCACCAAGTGTGCAGAGGCTCTGGCACCCCTGTTGAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CAA 90 bp GCGCCACAGCCACCCACCGTCTTGGCAGCTGCGATGCCGCAGTTCTaGAGCAGGCTGAAGCTGAAAGGACTGACGGCGTCCTTGGGTGGG +
Preference number: 6 (lower is better)
Translates to: APQPPTVLAAAMPQF*SRLKLKGLTASLGG
Trigger: CCCACCCAAGGACGCCGTCAGTCCTTTCAGCTTCAGCCTGCTCAAGAACTGCGGCATCGCAGCTGCCAAGACGGTGGGTGGCTGTGGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CAA 90 bp CTGGCCGTGGGGGCGATCGTCTTGGCAGCTGCGATGCCGCAGTTCTaGAGCAGGCTGAAGCTGAAAGGACTGACGGCGTCCTTGGGTGGG +
Preference number: 6 (lower is better)
Translates to: LAVGAIVLAAAMPQF*SRLKLKGLTASLGG
Trigger: CCCACCCAAGGACGCCGTCAGTCCTTTCAGCTTCAGCCTGCTCAAGAACTGCGGCATCGCAGCTGCCAAGACGATCGCCCCCACGGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000166577.2
CDS TCA 72 bp GGTGTAGAGCGCTGCGCCCGCTCCTGTCAGCCACATTaGGACTGCTCAACAGGGGTGCCAGAGCCTCTGCAC +
Preference number: 6 (lower is better)
Translates to: GVERCARSCQPH*DCSTGVPEPLH
Trigger: GTGCAGAGGCTCTGGCACCCCTGTTGAGCAGTCTCAATGTGGCTGACAGGAGCGGGCGCAGCGCTCTACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS TCA 72 bp CCACAGCAGCAGTCTGTCCACTCTCAGCGGCCGTCATaGGCGCAGTGCGGCCAGTGTGGTCGGTGGCATTCA +
Preference number: 6 (lower is better)
Translates to: PQQQSVHSQRPS*AQCGQCGRWHS
Trigger: TGAATGCCACCGACCACACTGGCCGCACTGCGCTCATGACGGCCGCTGAGAGTGGACAGACTGCTGCTGTGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000014642.10
ENSMUST00000166577.2
CDS GCA 72 bp GTGGCCCGGTTGGCAGCAGCCACATGCAGTGGTGTCTaGCACAGCTTGTCCCGGGCATTCACATCCGCTGAG +
Preference number: 6 (lower is better)
Translates to: VARLAAATCSGV*HSLSRAFTSAE
Trigger: CTCAGCGGATGTGAATGCCCGGGACAAGCTGTGGCAGACACCACTGCATGTGGCTGCTGCCAACCGGGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS GCA 72 bp AGGCAGGGCGCCACAGCCACCCACCGTCTTGGCAGCTaGGATGCCGCAGTTCTTGAGCAGGCTGAAGCTGAA +
Preference number: 6 (lower is better)
Translates to: RQGATATHRLGS*DAAVLEQAEAE
Trigger: TTCAGCTTCAGCCTGCTCAAGAACTGCGGCATCGCAGCTGCCAAGACGGTGGGTGGCTGTGGCGCCCTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CCA 72 bp GACTGCTCAACAGGGGTGCCAGAGCCTCTGCACACTTaGTGGCCCGGTTGGCAGCAGCCACATGCAGTGGTG +
Preference number: 6 (lower is better)
Translates to: DCSTGVPEPLHT*WPGWQQPHAVV
Trigger: CACCACTGCATGTGGCTGCTGCCAACCGGGCCACCAAGTGTGCAGAGGCTCTGGCACCCCTGTTGAGCAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CCA 72 bp CGCTCAGTGGCCAGAAAGAGCGCGGTCCGGCCCTTGTaGTCCCTTACATCCAGGTTCACCAGCGTCTCAGCC +
Preference number: 6 (lower is better)
Translates to: RSVARKSAVRPL*SLTSRFTSVSA
Trigger: GGCTGAGACGCTGGTGAACCTGGATGTAAGGGACCACAAGGGCCGGACCGCGCTCTTTCTGGCCACTGAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CCA 72 bp TCAGTACCTCCACACACTCAGTGGAGCCTCGCTCAGTaGCCAGAAAGAGCGCGGTCCGGCCCTTGTGGTCCC +
Preference number: 6 (lower is better)
Translates to: SVPPHTQWSLAQ*PERARSGPCGP
Trigger: GGGACCACAAGGGCCGGACCGCGCTCTTTCTGGCCACTGAGCGAGGCTCCACTGAGTGTGTGGAGGTACTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CCA 72 bp CTCTCAGCGGCCGTCATGAGCGCAGTGCGGCCAGTGTaGTCGGTGGCATTCACTTCGGCTTGGTGCTGCAAC +
Preference number: 6 (lower is better)
Translates to: LSAAVMSAVRPV*SVAFTSAWCCN
Trigger: GTTGCAGCACCAAGCCGAAGTGAATGCCACCGACCACACTGGCCGCACTGCGCTCATGACGGCCGCTGAGAG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000014642.10
ENSMUST00000166577.2
CDS CAA 90 bp TCAGTGGAGCCTCGCTCAGTGGCCAGAAAGAGCGCGGTCCGGCCCTaGTGGTCCCTTACATCCAGGTTCACCAGCGTCTCAGCCAGTGTC +
Preference number: 6 (lower is better)
Translates to: SVEPRSVARKSAVRP*WSLTSRFTSVSASV
Trigger: GACACTGGCTGAGACGCTGGTGAACCTGGATGTAAGGGACCACAAGGGCCGGACCGCGCTCTTTCTGGCCACTGAGCGAGGCTCCACTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CAA 90 bp CATGAGCGCAGTGCGGCCAGTGTGGTCGGTGGCATTCACTTCGGCTaGGTGCTGCAACAGCATCCGGAGCCCAGAGACGTTGTCCGCGAA +
Preference number: 6 (lower is better)
Translates to: HERSAASVVGGIHFG*VLQQHPEPRDVVRE
Trigger: TTCGCGGACAACGTCTCTGGGCTCCGGATGCTGTTGCAGCACCAAGCCGAAGTGAATGCCACCGACCACACTGGCCGCACTGCGCTCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS GCA 72 bp TCTGCACACTTGGTGGCCCGGTTGGCAGCAGCCACATaGAGTGGTGTCTGCCACAGCTTGTCCCGGGCATTC +
Preference number: 6 (lower is better)
Translates to: SAHLVARLAAAT*SGVCHSLSRAF
Trigger: GAATGCCCGGGACAAGCTGTGGCAGACACCACTGCATGTGGCTGCTGCCAACCGGGCCACCAAGTGTGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS GCA 72 bp GCTCCTGTCAGCCACATTGAGACTGCTCAACAGGGGTaGCAGAGCCTCTGCACACTTGGTGGCCCGGTTGGC +
Preference number: 6 (lower is better)
Translates to: APVSHIETAQQG*QSLCTLGGPVG
Trigger: GCCAACCGGGCCACCAAGTGTGCAGAGGCTCTGGCACCCCTGTTGAGCAGTCTCAATGTGGCTGACAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS GCA 72 bp ACACCAGCATCTAGGGGGTCTGTGGAAAGGGCAGCCTaGAGCAGAGTCCGCAGCACTGCAGTGTGGCCACAG +
Preference number: 6 (lower is better)
Translates to: TPASRGSVERAA*SRVRSTAVWPQ
Trigger: CTGTGGCCACACTGCAGTGCTGCGGACTCTGCTGCAGGCTGCCCTTTCCACAGACCCCCTAGATGCTGGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS GCA 72 bp CGGCCAGTGTGGTCGGTGGCATTCACTTCGGCTTGGTaGTGCAACAGCATCCGGAGCCCAGAGACGTTGTCC +
Preference number: 6 (lower is better)
Translates to: RPVWSVAFTSAW*CNSIRSPETLS
Trigger: GGACAACGTCTCTGGGCTCCGGATGCTGTTGCAGCACCAAGCCGAAGTGAATGCCACCGACCACACTGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS GCA 72 bp GACTCAGCAGGGCCTGCACCACAGAAGCCAGACCGTTaGGGGCAGCAATGTGGAGAGGCATCTGCAGTGCAC +
Preference number: 6 (lower is better)
Translates to: DSAGPAPQKPDR*GQQCGEASAVH
Trigger: GTGCACTGCAGATGCCTCTCCACATTGCTGCCCGCAACGGTCTGGCTTCTGTGGTGCAGGCCCTGCTGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000014642.10
ENSMUST00000166577.2
CDS CCA 72 bp GGGCAGTGCGGCCCCGGAGGTCAGCAGCATCAGCCGTaGATCCCTTCTCTAGCAGCAGATGTACACAGTCCA +
Preference number: 6 (lower is better)
Translates to: GQCGPGGQQHQP*IPSLAADVHSP
Trigger: TGGACTGTGTACATCTGCTGCTAGAGAAGGGATCCACGGCTGATGCTGCTGACCTCCGGGGCCGCACTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CCA 72 bp GTGCGGCCAGTGTGGTCGGTGGCATTCACTTCGGCTTaGTGCTGCAACAGCATCCGGAGCCCAGAGACGTTG +
Preference number: 6 (lower is better)
Translates to: VRPVWSVAFTSA*CCNSIRSPETL
Trigger: CAACGTCTCTGGGCTCCGGATGCTGTTGCAGCACCAAGCCGAAGTGAATGCCACCGACCACACTGGCCGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CAA 72 bp TGGTGTAGAGCGCTGCGCCCGCTCCTGTCAGCCACATaGAGACTGCTCAACAGGGGTGCCAGAGCCTCTGCA +
Preference number: 6 (lower is better)
Translates to: WCRALRPLLSAT*RLLNRGARASA
Trigger: TGCAGAGGCTCTGGCACCCCTGTTGAGCAGTCTCAATGTGGCTGACAGGAGCGGGCGCAGCGCTCTACACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CAA 72 bp CCTCGCTCAGTGGCCAGAAAGAGCGCGGTCCGGCCCTaGTGGTCCCTTACATCCAGGTTCACCAGCGTCTCA +
Preference number: 6 (lower is better)
Translates to: PRSVARKSAVRP*WSLTSRFTSVS
Trigger: TGAGACGCTGGTGAACCTGGATGTAAGGGACCACAAGGGCCGGACCGCGCTCTTTCTGGCCACTGAGCGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CAA 72 bp CCACCCACCGTCTTGGCAGCTGCGATGCCGCAGTTCTaGAGCAGGCTGAAGCTGAAAGGACTGACGGCGTCC +
Preference number: 6 (lower is better)
Translates to: PPTVLAAAMPQF*SRLKLKGLTAS
Trigger: GGACGCCGTCAGTCCTTTCAGCTTCAGCCTGCTCAAGAACTGCGGCATCGCAGCTGCCAAGACGGTGGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CAA 72 bp GGGGCGATCGTCTTGGCAGCTGCGATGCCGCAGTTCTaGAGCAGGCTGAAGCTGAAAGGACTGACGGCGTCC +
Preference number: 6 (lower is better)
Translates to: GAIVLAAAMPQF*SRLKLKGLTAS
Trigger: GGACGCCGTCAGTCCTTTCAGCTTCAGCCTGCTCAAGAACTGCGGCATCGCAGCTGCCAAGACGATCGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166577.2
CDS TCA 72 bp CCCAGCACCTTCTCGTTTCGGGAGGCAGCGGCACGATaGAGAGGGGTCAGCCACAGTGTGTCCTTAGCGTTG +
Preference number: 6 (lower is better)
Translates to: PSTFSFREAAAR*RGVSHSVSLAL
Trigger: CAACGCTAAGGACACACTGTGGCTGACCCCTCTTCATCGTGCCGCTGCCTCCCGAAACGAGAAGGTGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS GCA 72 bp CACATTGAGACTGCTCAACAGGGGTGCCAGAGCCTCTaGACACTTGGTGGCCCGGTTGGCAGCAGCCACATG +
Preference number: 6 (lower is better)
Translates to: HIETAQQGCQSL*TLGGPVGSSHM
Trigger: CATGTGGCTGCTGCCAACCGGGCCACCAAGTGTGCAGAGGCTCTGGCACCCCTGTTGAGCAGTCTCAATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS GCA 72 bp CTGTACACTGGCCGTGGGGGCGATCGTCTTGGCAGCTaGGATGCCGCAGTTCTTGAGCAGGCTGAAGCTGAA +
Preference number: 6 (lower is better)
Translates to: LYTGRGGDRLGS*DAAVLEQAEAE
Trigger: TTCAGCTTCAGCCTGCTCAAGAACTGCGGCATCGCAGCTGCCAAGACGATCGCCCCCACGGCCAGTGTACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000166577.2
CDS CCA 72 bp GAACGCACTTCCTCCACATCTCGGCTAAAGATGGCCTaGACCAGGGGCGGCTGGTCCGTGATGCTGAGGATC +
Preference number: 6 (lower is better)
Translates to: ERTSSTSRLKMA*TRGGWSVMLRI
Trigger: GATCCTCAGCATCACGGACCAGCCGCCCCTGGTCCAGGCCATCTTTAGCCGAGATGTGGAGGAAGTGCGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CAA 72 bp AGTGCGGCCAGTGTGGTCGGTGGCATTCACTTCGGCTaGGTGCTGCAACAGCATCCGGAGCCCAGAGACGTT +
Preference number: 6 (lower is better)
Translates to: SAASVVGGIHFG*VLQQHPEPRDV
Trigger: AACGTCTCTGGGCTCCGGATGCTGTTGCAGCACCAAGCCGAAGTGAATGCCACCGACCACACTGGCCGCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CAA 90 bp TGTACTGCATGGTGTAGAGCGCTGCGCCCGCTCCTGTCAGCCACATaGAGACTGCTCAACAGGGGTGCCAGAGCCTCTGCACACTTGGTG +
Preference number: 6 (lower is better)
Translates to: CTAWCRALRPLLSAT*RLLNRGARASAHLV
Trigger: CACCAAGTGTGCAGAGGCTCTGGCACCCCTGTTGAGCAGTCTCAATGTGGCTGACAGGAGCGGGCGCAGCGCTCTACACCATGCAGTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS GCA 72 bp GTGATGTCAGCTCGCTCCCCACTGTCAATCAGCAAGTaGAGGGAATCGGTGTGGCCAGAGGCAGCAGCAGCA +
Preference number: 6 (lower is better)
Translates to: VMSARSPLSISK*RESVWPEAAAA
Trigger: TGCTGCTGCTGCCTCTGGCCACACCGATTCCCTGCACTTGCTGATTGACAGTGGGGAGCGAGCTGACATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CAA 72 bp TTGGCAGCAGCCACATGCAGTGGTGTCTGCCACAGCTaGTCCCGGGCATTCACATCCGCTGAGTGTGCCAAC +
Preference number: 6 (lower is better)
Translates to: LAAATCSGVCHS*SRAFTSAECAN
Trigger: GTTGGCACACTCAGCGGATGTGAATGCCCGGGACAAGCTGTGGCAGACACCACTGCATGTGGCTGCTGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CAA 90 bp GCGCCGTTGGTAGAGACAGCCGCCACATGCAGTGGAGTGAAGCCCTaGTCATTCGGCTGGTTCACATTGGCTCCTGCGTTCACAAGCTCG +
Preference number: 6 (lower is better)
Translates to: APLVETAATCSGVKP*SFGWFTLAPAFTSS
Trigger: CGAGCTTGTGAACGCAGGAGCCAATGTGAACCAGCCGAATGACAAGGGCTTCACTCCACTGCATGTGGCGGCTGTCTCTACCAACGGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CAA 90 bp GAGGCAGCAGCAGCATGTAAGGGTGTCCACTTGCGTTTTCGCTCCTaGATGAGGGCAGAGGCACCATGGGCCGTCAGTACCTCCACACAC +
Preference number: 6 (lower is better)
Translates to: EAAAACKGVHLRFRS*MRAEAPWAVSTSTH
Trigger: GTGTGTGGAGGTACTGACGGCCCATGGTGCCTCTGCCCTCATCAAGGAGCGAAAACGCAAGTGGACACCCTTACATGCTGCTGCTGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CAA 90 bp CCGCAGTTCTTGAGCAGGCTGAAGCTGAAAGGACTGACGGCGTCCTaGGGTGGGAAAGGCTTCATGGTGGAAAGGATCAAGGCCAGGCAG +
Preference number: 6 (lower is better)
Translates to: PQFLSRLKLKGLTAS*GGKGFMVERIKARQ
Trigger: CTGCCTGGCCTTGATCCTTTCCACCATGAAGCCTTTCCCACCCAAGGACGCCGTCAGTCCTTTCAGCTTCAGCCTGCTCAAGAACTGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000014642.10
ENSMUST00000166577.2
CDS GCA 72 bp AGACACAGAGCGCCGTTGGTAGAGACAGCCGCCACATaGAGTGGAGTGAAGCCCTTGTCATTCGGCTGGTTC +
Preference number: 6 (lower is better)
Translates to: RHRAPLVETAAT*SGVKPLSFGWF
Trigger: GAACCAGCCGAATGACAAGGGCTTCACTCCACTGCATGTGGCGGCTGTCTCTACCAACGGCGCTCTGTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CCA 72 bp AGGTTCACTGTCTCAAGATGCCCACTGTGTACTGCATaGTGTAGAGCGCTGCGCCCGCTCCTGTCAGCCACA +
Preference number: 6 (lower is better)
Translates to: RFTVSRCPLCTA*CRALRPLLSAT
Trigger: TGTGGCTGACAGGAGCGGGCGCAGCGCTCTACACCATGCAGTACACAGTGGGCATCTTGAGACAGTGAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CCA 72 bp TTGCGTTTTCGCTCCTTGATGAGGGCAGAGGCACCATaGGCCGTCAGTACCTCCACACACTCAGTGGAGCCT +
Preference number: 6 (lower is better)
Translates to: LRFRSLMRAEAP*AVSTSTHSVEP
Trigger: AGGCTCCACTGAGTGTGTGGAGGTACTGACGGCCCATGGTGCCTCTGCCCTCATCAAGGAGCGAAAACGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CCA 72 bp TCCCCACTGTCAATCAGCAAGTGCAGGGAATCGGTGTaGCCAGAGGCAGCAGCAGCATGTAAGGGTGTCCAC +
Preference number: 6 (lower is better)
Translates to: SPLSISKCRESV*PEAAAACKGVH
Trigger: GTGGACACCCTTACATGCTGCTGCTGCCTCTGGCCACACCGATTCCCTGCACTTGCTGATTGACAGTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CAA 72 bp GCAGCATGTAAGGGTGTCCACTTGCGTTTTCGCTCCTaGATGAGGGCAGAGGCACCATGGGCCGTCAGTACC +
Preference number: 6 (lower is better)
Translates to: AACKGVHLRFRS*MRAEAPWAVST
Trigger: GGTACTGACGGCCCATGGTGCCTCTGCCCTCATCAAGGAGCGAAAACGCAAGTGGACACCCTTACATGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS TCA 72 bp TGTGGAGCAGCCCGTAGCCCTTTCGATCTTTACAGCTaGGGTCTGCTCCACGTGCCACCAGCAGTTTCAGGA +
Preference number: 6 (lower is better)
Translates to: CGAARSPFDLYS*GLLHVPPAVSG
Trigger: TCCTGAAACTGCTGGTGGCACGTGGAGCAGACCTCAGCTGTAAAGATCGAAAGGGCTACGGGCTGCTCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS TCA 72 bp CATGAAGACAGGTGCGGCCAAGGCTGTCCGGTGTGTTaGTGTCAAACCCAGCGGAAAGCACATGCTCGTTGC +
Preference number: 6 (lower is better)
Translates to: HEDRCGQGCPVC*CQTQRKAHARC
Trigger: GCAACGAGCATGTGCTTTCCGCTGGGTTTGACATCAACACACCGGACAGCCTTGGCCGCACCTGTCTTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS GCA 72 bp CGGCAACAGTCAGAGAATCCAAAGAGAACAGCTAAGTaGAGGGGGAACATGTCGTGGATACCGCGCCGGGCA +
Preference number: 6 (lower is better)
Translates to: RQQSENPKRTAK*RGNMSWIPRRA
Trigger: TGCCCGGCGCGGTATCCACGACATGTTCCCCCTGCACTTAGCTGTTCTCTTTGGATTCTCTGACTGTTGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CCA 72 bp CAGAGCGCCGTTGGTAGAGACAGCCGCCACATGCAGTaGAGTGAAGCCCTTGTCATTCGGCTGGTTCACATT +
Preference number: 6 (lower is better)
Translates to: QSAVGRDSRHMQ*SEALVIRLVHI
Trigger: AATGTGAACCAGCCGAATGACAAGGGCTTCACTCCACTGCATGTGGCGGCTGTCTCTACCAACGGCGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CCA 72 bp TCTCCGGTAGGTGTCAGAGGCAGCAGCATAGTGAAGTaGCGAACAGCCCTTACAGTCGGCCTCATTGACACC +
Preference number: 6 (lower is better)
Translates to: SPVGVRGSSIVK*RTALTVGLIDT
Trigger: GGTGTCAATGAGGCCGACTGTAAGGGCTGTTCGCCACTTCACTATGCTGCTGCCTCTGACACCTACCGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CCA 72 bp CAGGCTGAAGCTGAAAGGACTGACGGCGTCCTTGGGTaGGAAAGGCTTCATGGTGGAAAGGATCAAGGCCAG +
Preference number: 6 (lower is better)
Translates to: QAEAERTDGVLG*ERLHGGKDQGQ
Trigger: CTGGCCTTGATCCTTTCCACCATGAAGCCTTTCCCACCCAAGGACGCCGTCAGTCCTTTCAGCTTCAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000014642.10
ENSMUST00000166577.2
CDS CAA 72 bp ATGTCGTGGATACCGCGCCGGGCAGTATCTGCGCCATaGGTCATGAGAGTGCTGATGAGTAGCTCGTGTCCA +
Preference number: 6 (lower is better)
Translates to: MSWIPRRAVSAP*VMRVLMSSSCP
Trigger: TGGACACGAGCTACTCATCAGCACTCTCATGACCAATGGCGCAGATACTGCCCGGCGCGGTATCCACGACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS GCA 72 bp CGCCTCTCTTGGTCCAGTACATTGATGTTCTCCTTCTaGGAGAGGAGGGAACGCACTTCCTCCACATCTCGG +
Preference number: 6 (lower is better)
Translates to: RLSWSSTLMFSF*ERRERTSSTSR
Trigger: CCGAGATGTGGAGGAAGTGCGTTCCCTCCTCTCGCAGAAGGAGAACATCAATGTACTGGACCAAGAGAGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CCA 72 bp GCACAGTCAATCTCGCTACCATTCTGGATGAGGATCTaGGAACGCGTGAAACGCCCATGGATGGCAGCCATG +
Preference number: 6 (lower is better)
Translates to: AQSISLPFWMRI*ERVKRPWMAAM
Trigger: CATGGCTGCCATCCATGGGCGTTTCACGCGTTCCCAGATCCTCATCCAGAATGGTAGCGAGATTGACTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CAA 90 bp CGGGCAGCAATGTGGAGAGGCATCTGCAGTGCACTGTTGGTAGCATaGATAAGGCCAAGGTCTTGGGTTTCTGCCAGGATCATGAGGGCA +
Preference number: 6 (lower is better)
Translates to: RAAMWRGICSALLVA*IRPRSWVSARIMRA
Trigger: TGCCCTCATGATCCTGGCAGAAACCCAAGACCTTGGCCTTATCAATGCTACCAACAGTGCACTGCAGATGCCTCTCCACATTGCTGCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000014642.10
ENSMUST00000166577.2
CDS TCA 72 bp TGCTCGTTGCTGAGCGAAGACACGATGCTATACAGCTaGCCTGAGGAGAGAAGCTTCCGGCAACAGTCAGAG +
Preference number: 6 (lower is better)
Translates to: CSLLSEDTMLYS*PEERSFRQQSE
Trigger: CTCTGACTGTTGCCGGAAGCTTCTCTCCTCAGGTCAGCTGTATAGCATCGTGTCTTCGCTCAGCAACGAGCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS GCA 72 bp AGGACATTTCTAAGAGCAGTTCGAGGTTCTGTCTGTTaGCGTAGGCGGCTGCATAGTGCACGGCTGTGTAGC +
Preference number: 6 (lower is better)
Translates to: RTFLRAVRGSVC*RRRLHSARLCS
Trigger: GCTACACAGCCGTGCACTATGCAGCCGCCTACGGCAACAGACAGAACCTCGAACTGCTCTTAGAAATGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CCA 72 bp GATGGGGACATCGCCTACGTAGGCAGCAGCATGCAATaGGGTTCGCCTCTCTTGGTCCAGTACATTGATGTT +
Preference number: 6 (lower is better)
Translates to: DGDIAYVGSSMQ*GSPLLVQYIDV
Trigger: AACATCAATGTACTGGACCAAGAGAGGCGAACCCCATTGCATGCTGCTGCCTACGTAGGCGATGTCCCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CCA 72 bp GCCACATGCAGTGGAGTGAAGCCCTTGTCATTCGGCTaGTTCACATTGGCTCCTGCGTTCACAAGCTCGATA +
Preference number: 6 (lower is better)
Translates to: ATCSGVKPLSFG*FTLAPAFTSSI
Trigger: TATCGAGCTTGTGAACGCAGGAGCCAATGTGAACCAGCCGAATGACAAGGGCTTCACTCCACTGCATGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CAA 90 bp ACGTCAGCCCCATTATTAACTAACAGTTCCAGACACAGAGCGCCGTaGGTAGAGACAGCCGCCACATGCAGTGGAGTGAAGCCCTTGTCA +
Preference number: 6 (lower is better)
Translates to: TSAPLLTNSSRHRAP*VETAATCSGVKPLS
Trigger: TGACAAGGGCTTCACTCCACTGCATGTGGCGGCTGTCTCTACCAACGGCGCTCTGTGTCTGGAACTGTTAGTTAATAATGGGGCTGACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS TCA 72 bp TTAAGACACTCAACATTTCCTCCTGAAGCAGCAGCATaGAGACAGGTGCGGCCAAGGCTGTCCGGTGTGTTG +
Preference number: 6 (lower is better)
Translates to: LRHSTFPPEAAA*RQVRPRLSGVL
Trigger: CAACACACCGGACAGCCTTGGCCGCACCTGTCTTCATGCTGCTGCTTCAGGAGGAAATGTTGAGTGTCTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS TCA 72 bp CACAGTGACCGTTGTAGGCAGCTAAGTGCAAAGGGCTaGCTGGAACTGTACTCTCCACATCCTCTAGGCAGT +
Preference number: 6 (lower is better)
Translates to: HSDRCRQLSAKG*LELYSPHPLGS
Trigger: ACTGCCTAGAGGATGTGGAGAGTACAGTTCCAGTCAGCCCTTTGCACTTAGCTGCCTACAACGGTCACTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS GCA 72 bp TCTAAATGCCCTAGAAAAGCTGCCCAGTGCAGCGGCTaGCGTTCCTTTTTATCGCAGACATTCAGGCTGGCT +
Preference number: 6 (lower is better)
Translates to: SKCPRKAAQCSG*RSFLSQTFRLA
Trigger: AGCCAGCCTGAATGTCTGCGATAAAAAGGAACGGCAGCCGCTGCACTGGGCAGCTTTTCTAGGGCATTTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS GCA 72 bp TCCGGTGTGTTGATGTCAAACCCAGCGGAAAGCACATaGTCGTTGCTGAGCGAAGACACGATGCTATACAGC +
Preference number: 6 (lower is better)
Translates to: SGVLMSNPAEST*SLLSEDTMLYS
Trigger: GCTGTATAGCATCGTGTCTTCGCTCAGCAACGAGCATGTGCTTTCCGCTGGGTTTGACATCAACACACCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CCA 72 bp GACAATCTTCATGTCCAGTGTAGGAGGCCCAGTGCATaGGCGAGTATCCGCTGTAATCGACACCAGCATCTA +
Preference number: 6 (lower is better)
Translates to: DNLHVQCRRPSA*ASIRCNRHQHL
Trigger: TAGATGCTGGTGTCGATTACAGCGGATACTCGCCCATGCACTGGGCCTCCTACACTGGACATGAAGATTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CAA 90 bp AGGCATCTGCAGTGCACTGTTGGTAGCATTGATAAGGCCAAGGTCTaGGGTTTCTGCCAGGATCATGAGGGCACATTTCTCATGGCCCTT +
Preference number: 6 (lower is better)
Translates to: RHLQCTVGSIDKAKV*GFCQDHEGTFLMAL
Trigger: AAGGGCCATGAGAAATGTGCCCTCATGATCCTGGCAGAAACCCAAGACCTTGGCCTTATCAATGCTACCAACAGTGCACTGCAGATGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000014642.10
ENSMUST00000166577.2
CDS GCA 72 bp TTCAGGACCTCTAAATGCCCTAGAAAAGCTGCCCAGTaGAGCGGCTGCCGTTCCTTTTTATCGCAGACATTC +
Preference number: 6 (lower is better)
Translates to: FRTSKCPRKAAQ*SGCRSFLSQTF
Trigger: GAATGTCTGCGATAAAAAGGAACGGCAGCCGCTGCACTGGGCAGCTTTTCTAGGGCATTTAGAGGTCCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS GCA 72 bp CAGTGTCACTGCGCACTGGTAGCTACCATTAGCAGCTaGATAGTGCAGTGGGGTCCTTCCAAATTTGTCTCT +
Preference number: 6 (lower is better)
Translates to: QCHCALVATISS*IVQWGPSKFVS
Trigger: AGAGACAAATTTGGAAGGACCCCACTGCACTATGCAGCTGCTAATGGTAGCTACCAGTGCGCAGTGACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CAA 72 bp CCATTATTAACTAACAGTTCCAGACACAGAGCGCCGTaGGTAGAGACAGCCGCCACATGCAGTGGAGTGAAG +
Preference number: 6 (lower is better)
Translates to: PLLTNSSRHRAP*VETAATCSGVK
Trigger: CTTCACTCCACTGCATGTGGCGGCTGTCTCTACCAACGGCGCTCTGTGTCTGGAACTGTTAGTTAATAATGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CAA 72 bp ATGTGGAGAGGCATCTGCAGTGCACTGTTGGTAGCATaGATAAGGCCAAGGTCTTGGGTTTCTGCCAGGATC +
Preference number: 6 (lower is better)
Translates to: MWRGICSALLVA*IRPRSWVSARI
Trigger: GATCCTGGCAGAAACCCAAGACCTTGGCCTTATCAATGCTACCAACAGTGCACTGCAGATGCCTCTCCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000014642.10
ENSMUST00000166577.2
CDS CCA 72 bp GATCCCTTCTCTAGCAGCAGATGTACACAGTCCACATaGCCATTCATAATGGCCAGCATCAGTGGGGTTTGT +
Preference number: 6 (lower is better)
Translates to: DPFSSSRCTQST*PFIMASISGVC
Trigger: ACAAACCCCACTGATGCTGGCCATTATGAATGGCCATGTGGACTGTGTACATCTGCTGCTAGAGAAGGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014642.10
CDS CAA 72 bp CAGTGCACTGTTGGTAGCATTGATAAGGCCAAGGTCTaGGGTTTCTGCCAGGATCATGAGGGCACATTTCTC +
Preference number: 6 (lower is better)
Translates to: QCTVGSIDKAKV*GFCQDHEGTFL
Trigger: GAGAAATGTGCCCTCATGATCCTGGCAGAAACCCAAGACCTTGGCCTTATCAATGCTACCAACAGTGCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000014642.10
ENSMUST00000166577.2
CDS CCA 72 bp AGTGCACTGTTGGTAGCATTGATAAGGCCAAGGTCTTaGGTTTCTGCCAGGATCATGAGGGCACATTTCTCA +
Preference number: 6 (lower is better)
Translates to: SALLVALIRPRS*VSARIMRAHFS
Trigger: TGAGAAATGTGCCCTCATGATCCTGGCAGAAACCCAAGACCTTGGCCTTATCAATGCTACCAACAGTGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000014642.10
ENSMUST00000166577.2