Pregenerated sensors for ANKIB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040351Ensembl transcript IDs: ENSMUST00000043551.11, ENSMUST00000200335.2
Found 236 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGCCTCAGCTCAAACTGCTTGGACAACAGGAGGGAAGGAGGCCCCTaGAGAGGAGACAGACACCGAGGACAGAACTGTCTGGCCCAACTT | + |
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Preference number: 1 (lower is better) Translates to: RLSSNCLDNRREGGP*RGDRHRGQNCLAQL Trigger: AAGTTGGGCCAGACAGTTCTGTCCTCGGTGTCTGTCTCCTCTCCAGGGGCCTCCTTCCCTCCTGTTGTCCAAGCAGTTTGAGCTGAGGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| 3UTR CCA 90 bp | TGGCAACAAAAGCCCACTAATTTCTGGACAGTCACTGCTAGCGAGTaGCACCTTTTACTCCCGAGCACGCTGACAACTGCCCTGGAGCAC | + |
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Preference number: 1 (lower is better) Translates to: WQQKPTNFWTVTASE*HLLLPSTLTTALEH Trigger: GTGCTCCAGGGCAGTTGTCAGCGTGCTCGGGAGTAAAAGGTGCCACTCGCTAGCAGTGACTGTCCAGAAATTAGTGGGCTTTTGTTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| 3UTR CCA 90 bp | CACACCTCCCTGCCCTGTCAGCCAGCGCACGCACGAGTCAGAGTTTaGCACAATTGGACTGTGAAGAGACATGAGAAGGAATCTTTGATG | + |
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Preference number: 1 (lower is better) Translates to: HTSLPCQPAHARVRV*HNWTVKRHEKESLM Trigger: CATCAAAGATTCCTTCTCATGTCTCTTCACAGTCCAATTGTGCCAAACTCTGACTCGTGCGTGCGCTGGCTGACAGGGCAGGGAGGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| 3UTR GCA 90 bp | TTAAAAGGTCAACCTAAGTACTGCCGACTGCAGGCTAGACAGAGCTaGGTTCTCTCGGAATGTGGGTGGCAGCCCATTTATTCCATTGTG | + |
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Preference number: 1 (lower is better) Translates to: LKGQPKYCRLQARQS*VLSECGWQPIYSIV Trigger: CACAATGGAATAAATGGGCTGCCACCCACATTCCGAGAGAACGCAGCTCTGTCTAGCCTGCAGTCGGCAGTACTTAGGTTGACCTTTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| 3UTR TCA 90 bp | GCACGCACGAGTCAGAGTTTGGCACAATTGGACTGTGAAGAGACATaGGAAGGAATCTTTGATGATGTGAAAGGAAACCGGTTGCTCACT | + |
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Preference number: 1 (lower is better) Translates to: ARTSQSLAQLDCEET*EGIFDDVKGNRLLT Trigger: AGTGAGCAACCGGTTTCCTTTCACATCATCAAAGATTCCTTCTCATGTCTCTTCACAGTCCAATTGTGCCAAACTCTGACTCGTGCGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| 3UTR CCA 90 bp | CCCTGTACACACTTAGTAGAGAGATTTTGGTTTCTGGTAACAATGTaGCAAAGCACTCCAGGAGTGCCCCTTGTATCTATGTTGCTTATG | + |
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Preference number: 1 (lower is better) Translates to: PCTHLVERFWFLVTM*QSTPGVPLVSMLLM Trigger: CATAAGCAACATAGATACAAGGGGCACTCCTGGAGTGCTTTGCCACATTGTTACCAGAAACCAAAATCTCTCTACTAAGTGTGTACAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| 3UTR TCA 90 bp | GCAAGAGAACAAACACAGCAGCATTTGCTATCTAGGCAAACCAATTaGACACTTAGTTGTCATAGTTACTGTAAAGGCAAGGCCATGGGT | + |
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Preference number: 1 (lower is better) Translates to: AREQTQQHLLSRQTN*TLSCHSYCKGKAMG Trigger: ACCCATGGCCTTGCCTTTACAGTAACTATGACAACTAAGTGTTCAATTGGTTTGCCTAGATAGCAAATGCTGCTGTGTTTGTTCTCTTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| 3UTR GCA 90 bp | CATTCAATCCTAACATCAGTGGTTCATAACCAAGTTCAAATTAAGTaGATTAAAGTCTCTCTAAAGCATACGCCACCTCCCAGACCCCTG | + |
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Preference number: 1 (lower is better) Translates to: HSILTSVVHNQVQIK*IKVSLKHTPPPRPL Trigger: CAGGGGTCTGGGAGGTGGCGTATGCTTTAGAGAGACTTTAATGCACTTAATTTGAACTTGGTTATGAACCACTGATGTTAGGATTGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| 3UTR GCA 90 bp | GTTGAGTTTTCAATACTAAACAGTGATCAAACAGCAAATGAGTATTaGGCAAGAGAACAAACACAGCAGCATTTGCTATCTAGGCAAACC | + |
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Preference number: 1 (lower is better) Translates to: VEFSILNSDQTANEY*AREQTQQHLLSRQT Trigger: GGTTTGCCTAGATAGCAAATGCTGCTGTGTTTGTTCTCTTGCGCAATACTCATTTGCTGTTTGATCACTGTTTAGTATTGAAAACTCAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| 3UTR GCA 90 bp | AAACAGCAAATGAGTATTGCGCAAGAGAACAAACACAGCAGCATTTaGTATCTAGGCAAACCAATTGAACACTTAGTTGTCATAGTTACT | + |
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Preference number: 1 (lower is better) Translates to: KQQMSIAQENKHSSI*YLGKPIEHLVVIVT Trigger: AGTAACTATGACAACTAAGTGTTCAATTGGTTTGCCTAGATAGCAAATGCTGCTGTGTTTGTTCTCTTGCGCAATACTCATTTGCTGTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| 3UTR-3UTR TCA 90 bp | ATAGTTACTGTAAAGGCAAGGCCATGGGTGGTTTCATGGAGGTCTTCGCAATTCTACTCCCGAGCACGCTaGCAACTGCCCTGGAGCACC | + |
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Preference number: 2 (lower is better) Translates to: IVTVKARPWVVSWRSSQFYSRAR*QLPWST Trigger: GGTGCTCCAGGGCAGTTGTCAGCGTGCTCGGGAGTA...GAATTGCGAAGACCTCCATGAAACCACCCATGGCCTTGCCTTTACAGTAACTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| 3UTR-3UTR GCA 90 bp | ATCTATCCATTTAGGTTAGGCAAAGGCACGGTAACATGTTGCGTAGGATGTTGTTGCAGCACACCTCCCTaGCCTGTCAGCCAGCGCACG | + |
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Preference number: 2 (lower is better) Translates to: IYPFRLGKGTVTCCVGCCCSTPP*PVSQRT Trigger: CGTGCGCTGGCTGACAGGGCAGGGAGGTGTGCTGCA...ACAACATCCTACGCAACATGTTACCGTGCCTTTGCCTAACCTAAATGGATAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| 3UTR-3UTR CCA 90 bp | CATAGTTACTGTAAAGGCAAGGCCATGGGTGGTTTCATGGAGGTCTTCGCAATTAGGGAAGGAGGCCCCTaGAGAGGAGACAGACACCGA | + |
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Preference number: 2 (lower is better) Translates to: HSYCKGKAMGGFMEVFAIREGGP*RGDRHR Trigger: TCGGTGTCTGTCTCCTCTCCAGGGGCCTCCTTCCCT...AATTGCGAAGACCTCCATGAAACCACCCATGGCCTTGCCTTTACAGTAACTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| 3UTR-3UTR GCA 90 bp | TTCACTTGGCCTAGGACTTCCCTGTACACACTTAGTAGAGAGATTTTGGTTTCTCAGGCTAGACAGAGCTaGGTTCTCTCGGAATGTGGG | + |
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Preference number: 2 (lower is better) Translates to: FTWPRTSLYTLSREILVSQARQS*VLSECG Trigger: CCCACATTCCGAGAGAACGCAGCTCTGTCTAGCCTG...AGAAACCAAAATCTCTCTACTAAGTGTGTACAGGGAAGTCCTAGGCCAAGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| 3UTR-3UTR GCA 90 bp | CATAGTTACTGTAAAGGCAAGGCCATGGGTGGTTTCATGGAGGTCTTCGCAATTGGCACGGTAACATGTTaGGTAGGATGTTGTATTGAA | + |
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Preference number: 2 (lower is better) Translates to: HSYCKGKAMGGFMEVFAIGTVTC*VGCCIE Trigger: TTCAATACAACATCCTACGCAACATGTTACCGTGCC...AATTGCGAAGACCTCCATGAAACCACCCATGGCCTTGCCTTTACAGTAACTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| 3UTR-3UTR CCA 90 bp | AAACACAGCAGCATTTGCTATCTAGGCAAACCAATTGAACACTTAGTTGTCATAGTCACTGCTAGCGAGTaGCACCTTTTACTCCCGAGC | + |
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Preference number: 2 (lower is better) Translates to: KHSSICYLGKPIEHLVVIVTASE*HLLLPS Trigger: GCTCGGGAGTAAAAGGTGCCACTCGCTAGCAGTGAC...TATGACAACTAAGTGTTCAATTGGTTTGCCTAGATAGCAAATGCTGCTGTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| 3UTR-3UTR CCA 90 bp | TTCACTTGGCCTAGGACTTCCCTGTACACACTTAGTAGAGAGATTTTGGTTTCTAAGCCCACTAATTTCTaGACAGTCACTGCTAGCGAG | + |
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Preference number: 2 (lower is better) Translates to: FTWPRTSLYTLSREILVSKPTNF*TVTASE Trigger: CTCGCTAGCAGTGACTGTCCAGAAATTAGTGGGCTT...AGAAACCAAAATCTCTCTACTAAGTGTGTACAGGGAAGTCCTAGGCCAAGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| 3UTR-3UTR TCA 90 bp | ATAGTTACTGTAAAGGCAAGGCCATGGGTGGTTTCATGGAGGTCTTCGCAATTCGACTGTGAAGAGACATaGGAAGGAATCTTTGATGAT | + |
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Preference number: 2 (lower is better) Translates to: IVTVKARPWVVSWRSSQFDCEET*EGIFDD Trigger: ATCATCAAAGATTCCTTCTCATGTCTCTTCACAGTC...GAATTGCGAAGACCTCCATGAAACCACCCATGGCCTTGCCTTTACAGTAACTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| 3UTR-3UTR TCA 90 bp | TTCACTTGGCCTAGGACTTCCCTGTACACACTTAGTAGAGAGATTTTGGTTTCTGCCCAACTTCTACAATaGAGAAACCTCTTCACTTCT | + |
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Preference number: 2 (lower is better) Translates to: FTWPRTSLYTLSREILVSAQLLQ*RNLFTS Trigger: AGAAGTGAAGAGGTTTCTTCATTGTAGAAGTTGGGC...AGAAACCAAAATCTCTCTACTAAGTGTGTACAGGGAAGTCCTAGGCCAAGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| 3UTR-3UTR CCA 90 bp | AAACACAGCAGCATTTGCTATCTAGGCAAACCAATTGAACACTTAGTTGTCATATCAGCTCAAACTGCTTaGACAACAGGAGGGAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: KHSSICYLGKPIEHLVVISAQTA*TTGGKE Trigger: CTCCTTCCCTCCTGTTGTCCAAGCAGTTTGAGCTGA...TATGACAACTAAGTGTTCAATTGGTTTGCCTAGATAGCAAATGCTGCTGTGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| 3UTR-3UTR GCA 90 bp | CTTGGCCTAGGACTTCCCTGTACACACTTAGTAGAGAGATTTTGGTTTCTGGTATCCATTGTGTTCTCCTaGTCCTTTTTGTCACTAAAA | + |
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Preference number: 2 (lower is better) Translates to: LGLGLPCTHLVERFWFLVSIVFS*SFLSLK Trigger: TTTTAGTGACAAAAAGGAGCAGGAGAACACAATGGA...TACCAGAAACCAAAATCTCTCTACTAAGTGTGTACAGGGAAGTCCTAGGCCAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| 3UTR-3UTR TCA 90 bp | TTCACTTGGCCTAGGACTTCCCTGTACACACTTAGTAGAGAGATTTTGGTTTCTTCTAGGCAAACCAATTaGACACTTAGTTGTCATAGT | + |
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Preference number: 2 (lower is better) Translates to: FTWPRTSLYTLSREILVSSRQTN*TLSCHS Trigger: ACTATGACAACTAAGTGTTCAATTGGTTTGCCTAGA...AGAAACCAAAATCTCTCTACTAAGTGTGTACAGGGAAGTCCTAGGCCAAGTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| 3UTR-3UTR GCA 90 bp | TTCACTTGGCCTAGGACTTCCCTGTACACACTTAGTAGAGAGATTTTGGTTTCTTACACACTGGACCATTaGATCGTAATTACAACTAAG | + |
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Preference number: 2 (lower is better) Translates to: FTWPRTSLYTLSREILVSYTLDH*IVITTK Trigger: CTTAGTTGTAATTACGATGCAATGGTCCAGTGTGTA...AGAAACCAAAATCTCTCTACTAAGTGTGTACAGGGAAGTCCTAGGCCAAGTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| 3UTR-3UTR CCA 90 bp | AAACACAGCAGCATTTGCTATCTAGGCAAACCAATTGAACACTTAGTTGTCATAAGAGTTTGGCACAATTaGACTGTGAAGAGACATGAG | + |
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Preference number: 2 (lower is better) Translates to: KHSSICYLGKPIEHLVVIRVWHN*TVKRHE Trigger: CTCATGTCTCTTCACAGTCCAATTGTGCCAAACTCT...TATGACAACTAAGTGTTCAATTGGTTTGCCTAGATAGCAAATGCTGCTGTGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| 3UTR GCA 72 bp | CAGCACTACAAGCAGCACGGACGCCTCAGCTCAAACTaGTTGGACAACAGGAGGGAAGGAGGCCCCTGGAGA | + |
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Preference number: 3 (lower is better) Translates to: QHYKQHGRLSSN*LDNRREGGPWR Trigger: TCTCCAGGGGCCTCCTTCCCTCCTGTTGTCCAAGCAGTTTGAGCTGAGGCGTCCGTGCTGCTTGTAGTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| 3UTR CCA 72 bp | CTGCCCTGTCAGCCAGCGCACGCACGAGTCAGAGTTTaGCACAATTGGACTGTGAAGAGACATGAGAAGGAA | + |
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Preference number: 3 (lower is better) Translates to: LPCQPAHARVRV*HNWTVKRHEKE Trigger: TTCCTTCTCATGTCTCTTCACAGTCCAATTGTGCCAAACTCTGACTCGTGCGTGCGCTGGCTGACAGGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| 3UTR CCA 72 bp | AAGCCCACTAATTTCTGGACAGTCACTGCTAGCGAGTaGCACCTTTTACTCCCGAGCACGCTGACAACTGCC | + |
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Preference number: 3 (lower is better) Translates to: KPTNFWTVTASE*HLLLPSTLTTA Trigger: GGCAGTTGTCAGCGTGCTCGGGAGTAAAAGGTGCCACTCGCTAGCAGTGACTGTCCAGAAATTAGTGGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| 3UTR GCA 72 bp | CTATCCTCTGGGTACACCCTCTCCTCACCATGGATGTaGAAGATGCCTCTAGGGATTACAAGAGCTTTCTAC | + |
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Preference number: 3 (lower is better) Translates to: LSSGYTLSSPWM*KMPLGITRAFY Trigger: GTAGAAAGCTCTTGTAATCCCTAGAGGCATCTTGCACATCCATGGTGAGGAGAGGGTGTACCCAGAGGATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| 3UTR CCA 72 bp | CAGCCAGCGCACGCACGAGTCAGAGTTTGGCACAATTaGACTGTGAAGAGACATGAGAAGGAATCTTTGATG | + |
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Preference number: 3 (lower is better) Translates to: QPAHARVRVWHN*TVKRHEKESLM Trigger: CATCAAAGATTCCTTCTCATGTCTCTTCACAGTCCAATTGTGCCAAACTCTGACTCGTGCGTGCGCTGGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| 3UTR-3UTR CAA 90 bp | CTTGGCCTAGGACTTCCCTGTACACACTTAGTAGAGAGATTTTGGTTTCTGGTACTCAGCTCAAACTGCTaGGACAACAGGAGGGAAGGA | + |
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Preference number: 3 (lower is better) Translates to: LGLGLPCTHLVERFWFLVLSSNC*DNRREG Trigger: TCCTTCCCTCCTGTTGTCCAAGCAGTTTGAGCTGAG...TACCAGAAACCAAAATCTCTCTACTAAGTGTGTACAGGGAAGTCCTAGGCCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| 3UTR-3UTR CAA 90 bp | TTCACTTGGCCTAGGACTTCCCTGTACACACTTAGTAGAGAGATTTTGGTTTCTGTGAAAGGAAACCGGTaGCTCACTGTGGTAGACGCA | + |
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Preference number: 3 (lower is better) Translates to: FTWPRTSLYTLSREILVSVKGNR*LTVVDA Trigger: TGCGTCTACCACAGTGAGCAACCGGTTTCCTTTCAC...AGAAACCAAAATCTCTCTACTAAGTGTGTACAGGGAAGTCCTAGGCCAAGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| 3UTR-3UTR CAA 90 bp | CTTGGCCTAGGACTTCCCTGTACACACTTAGTAGAGAGATTTTGGTTTCTGGTACGCACGAGTCAGAGTTaGGCACAATTGGACTGTGAA | + |
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Preference number: 3 (lower is better) Translates to: LGLGLPCTHLVERFWFLVRTSQS*AQLDCE Trigger: TTCACAGTCCAATTGTGCCAAACTCTGACTCGTGCG...TACCAGAAACCAAAATCTCTCTACTAAGTGTGTACAGGGAAGTCCTAGGCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| 3UTR CCA 72 bp | CACTTAGTTGTCATAGTTACTGTAAAGGCAAGGCCATaGGTGGTTTCATGGAGGTCTTCGCAATTCATAGCA | + |
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Preference number: 3 (lower is better) Translates to: HLVVIVTVKARP*VVSWRSSQFIA Trigger: TGCTATGAATTGCGAAGACCTCCATGAAACCACCCATGGCCTTGCCTTTACAGTAACTATGACAACTAAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| 3UTR CCA 72 bp | CACTTAGTAGAGAGATTTTGGTTTCTGGTAACAATGTaGCAAAGCACTCCAGGAGTGCCCCTTGTATCTATG | + |
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Preference number: 3 (lower is better) Translates to: HLVERFWFLVTM*QSTPGVPLVSM Trigger: CATAGATACAAGGGGCACTCCTGGAGTGCTTTGCCACATTGTTACCAGAAACCAAAATCTCTCTACTAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| 3UTR-3UTR CAA 90 bp | CTTGGCCTAGGACTTCCCTGTACACACTTAGTAGAGAGATTTTGGTTTCTGGTAAGCCCATTTATTCCATaGTGTTCTCCTGCTCCTTTT | + |
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Preference number: 3 (lower is better) Translates to: LGLGLPCTHLVERFWFLVSPFIP*CSPAPF Trigger: AAAAGGAGCAGGAGAACACAATGGAATAAATGGGCT...TACCAGAAACCAAAATCTCTCTACTAAGTGTGTACAGGGAAGTCCTAGGCCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| 3UTR GCA 72 bp | GGCAAAGCACTCCAGGAGTGCCCCTTGTATCTATGTTaGTTATGTTATGCTAGCTTCAATAATGTAAGTACA | + |
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Preference number: 3 (lower is better) Translates to: GKALQECPLYLC*LCYASFNNVST Trigger: TGTACTTACATTATTGAAGCTAGCATAACATAAGCAACATAGATACAAGGGGCACTCCTGGAGTGCTTTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| 3UTR-3UTR CAA 90 bp | AAACACAGCAGCATTTGCTATCTAGGCAAACCAATTGAACACTTAGTTGTCATAGTGAAGGGAACTCCTTaGCATTCAATCCTAACATCA | + |
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Preference number: 3 (lower is better) Translates to: KHSSICYLGKPIEHLVVIVKGTP*HSILTS Trigger: TGATGTTAGGATTGAATGCAAAGGAGTTCCCTTCAC...TATGACAACTAAGTGTTCAATTGGTTTGCCTAGATAGCAAATGCTGCTGTGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| 3UTR TCA 72 bp | CAAACACAGCAGCATTTGCTATCTAGGCAAACCAATTaGACACTTAGTTGTCATAGTTACTGTAAAGGCAAG | + |
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Preference number: 3 (lower is better) Translates to: QTQQHLLSRQTN*TLSCHSYCKGK Trigger: CTTGCCTTTACAGTAACTATGACAACTAAGTGTTCAATTGGTTTGCCTAGATAGCAAATGCTGCTGTGTTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR TCA 90 bp | GAGGCCCCTGGAGAGGAGACAGACACCGAGGACAGAACTGTCTGGCCCAACTTCTGGCATCTGCACCCCTaGCCGCTGGCAGCAGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: EAPGEETDTEDRTVWPNFWHLHP*PLAAVL Trigger: GAGAACTGCTGCCAGCGGTCAGGGGTGCAGATGCCA...GAAGTTGGGCCAGACAGTTCTGTCCTCGGTGTCTGTCTCCTCTCCAGGGGCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR GCA 90 bp | GAGGCCCCTGGAGAGGAGACAGACACCGAGGACAGAACTGTCTGGCCCAACTTCCTGCACAAGGCATGCTaGCCTGATGATCTTGTGCCG | + |
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Preference number: 4 (lower is better) Translates to: EAPGEETDTEDRTVWPNFLHKAC*PDDLVP Trigger: CGGCACAAGATCATCAGGGCAGCATGCCTTGTGCAG...GAAGTTGGGCCAGACAGTTCTGTCCTCGGTGTCTGTCTCCTCTCCAGGGGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR GCA 90 bp | GAGGCCCCTGGAGAGGAGACAGACACCGAGGACAGAACTGTCTGGCCCAACTTCAAGAGAGTCCTGGTTTaGAGAGCGACTGGCAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: EAPGEETDTEDRTVWPNFKRVLV*RATGRA Trigger: AGCCCTGCCAGTCGCTCTGCAAACCAGGACTCTCTT...GAAGTTGGGCCAGACAGTTCTGTCCTCGGTGTCTGTCTCCTCTCCAGGGGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR CCA 90 bp | GAGGCCCCTGGAGAGGAGACAGACACCGAGGACAGAACTGTCTGGCCCAACTTCGATTGTCATTGGCACTaGGGTCCTGGCCAGCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: EAPGEETDTEDRTVWPNFDCHWH*GPGQLS Trigger: ACTCAGCTGGCCAGGACCCCAGTGCCAATGACAATC...GAAGTTGGGCCAGACAGTTCTGTCCTCGGTGTCTGTCTCCTCTCCAGGGGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR CCA 90 bp | GAGGCCCCTGGAGAGGAGACAGACACCGAGGACAGAACTGTCTGGCCCAACTTCGCAGTGACAACTGGATaGCCAGGAGTATGTTGGGAT | + |
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Preference number: 4 (lower is better) Translates to: EAPGEETDTEDRTVWPNFAVTTG*PGVCWD Trigger: ATCCCAACATACTCCTGGCCATCCAGTTGTCACTGC...GAAGTTGGGCCAGACAGTTCTGTCCTCGGTGTCTGTCTCCTCTCCAGGGGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR GCA 90 bp | ATAGTTACTGTAAAGGCAAGGCCATGGGTGGTTTCATGGAGGTCTTCGCAATTCCCAGCAGCTCCGAGCTaGTCAGCGCAGCCCGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: IVTVKARPWVVSWRSSQFPAAPS*SAQPEE Trigger: CTCCTCGGGCTGCGCTGAGCAGCTCGGAGCTGCTGG...GAATTGCGAAGACCTCCATGAAACCACCCATGGCCTTGCCTTTACAGTAACTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR GCA 90 bp | GAGGCCCCTGGAGAGGAGACAGACACCGAGGACAGAACTGTCTGGCCCAACTTCAATTTCTGTGGTTGCTaGTGGAGGAATCAGGGCGAT | + |
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Preference number: 4 (lower is better) Translates to: EAPGEETDTEDRTVWPNFNFCGC*WRNQGD Trigger: ATCGCCCTGATTCCTCCAGCAGCAACCACAGAAATT...GAAGTTGGGCCAGACAGTTCTGTCCTCGGTGTCTGTCTCCTCTCCAGGGGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR GCA 90 bp | GAGGCCCCTGGAGAGGAGACAGACACCGAGGACAGAACTGTCTGGCCCAACTTCAGGTCTTTGTGCTGCTaGTTTTCGGCACAATCACAA | + |
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Preference number: 4 (lower is better) Translates to: EAPGEETDTEDRTVWPNFRSLCC*FSAQSQ Trigger: TTGTGATTGTGCCGAAAAGCAGCAGCACAAAGACCT...GAAGTTGGGCCAGACAGTTCTGTCCTCGGTGTCTGTCTCCTCTCCAGGGGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR GCA 90 bp | CTTGGCCTAGGACTTCCCTGTACACACTTAGTAGAGAGATTTTGGTTTCTGGTACAGATGCACCAGGCCTaGGGCCGCTGCTCCCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: LGLGLPCTHLVERFWFLVQMHQA*GRCSPL Trigger: CAGAGGGGAGCAGCGGCCGCAGGCCTGGTGCATCTG...TACCAGAAACCAAAATCTCTCTACTAAGTGTGTACAGGGAAGTCCTAGGCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
||
| CDS-3UTR CCA 90 bp | GAGGCCCCTGGAGAGGAGACAGACACCGAGGACAGAACTGTCTGGCCCAACTTCAACCTACGAAGATCCTaGGGCCTTAGTCCTTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: EAPGEETDTEDRTVWPNFNLRRS*GLSPSY Trigger: ATATGAAGGACTAAGGCCCCAGGATCTTCGTAGGTT...GAAGTTGGGCCAGACAGTTCTGTCCTCGGTGTCTGTCTCCTCTCCAGGGGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR GCA 90 bp | CATAGTTACTGTAAAGGCAAGGCCATGGGTGGTTTCATGGAGGTCTTCGCAATTGAGGAGACTCAGTGCTaGGGGGCACAGAGTCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: HSYCKGKAMGGFMEVFAIEETQC*GAQSPV Trigger: GACTGGACTCTGTGCCCCGCAGCACTGAGTCTCCTC...AATTGCGAAGACCTCCATGAAACCACCCATGGCCTTGCCTTTACAGTAACTATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
||
| CDS-3UTR TCA 90 bp | CTTGGCCTAGGACTTCCCTGTACACACTTAGTAGAGAGATTTTGGTTTCTGGTACCTGGGAGCATCTGGTaGGTCTGCAGGAGCAACACC | + |
|
Preference number: 4 (lower is better) Translates to: LGLGLPCTHLVERFWFLVPGSIW*VCRSNT Trigger: GGTGTTGCTCCTGCAGACTCACCAGATGCTCCCAGG...TACCAGAAACCAAAATCTCTCTACTAAGTGTGTACAGGGAAGTCCTAGGCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR GCA 90 bp | ATAGTTACTGTAAAGGCAAGGCCATGGGTGGTTTCATGGAGGTCTTCGCAATTCAGAAGAGGTGTCCTTTaGCGCAGTCCACAGCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: IVTVKARPWVVSWRSSQFRRGVL*RSPQQG Trigger: CCCCTGCTGTGGACTGCGGCAAAGGACACCTCTTCT...GAATTGCGAAGACCTCCATGAAACCACCCATGGCCTTGCCTTTACAGTAACTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR CCA 90 bp | GAGGCCCCTGGAGAGGAGACAGACACCGAGGACAGAACTGTCTGGCCCAACTTCCACATTCCGTTTATTTaGGTTTCCATCTCTACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: EAPGEETDTEDRTVWPNFHIPFI*VSISTK Trigger: TTTGGTAGAGATGGAAACCCAAATAAACGGAATGTG...GAAGTTGGGCCAGACAGTTCTGTCCTCGGTGTCTGTCTCCTCTCCAGGGGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
||
| CDS-3UTR CCA 90 bp | CTTGGCCTAGGACTTCCCTGTACACACTTAGTAGAGAGATTTTGGTTTCTGGTACGGCAAAGCTGCGCCTaGGAGCATCTGGTGAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGLGLPCTHLVERFWFLVRQSCA*EHLVSL Trigger: CAGACTCACCAGATGCTCCCAGGCGCAGCTTTGCCG...TACCAGAAACCAAAATCTCTCTACTAAGTGTGTACAGGGAAGTCCTAGGCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
||
| CDS-3UTR GCA 90 bp | ATAGTTACTGTAAAGGCAAGGCCATGGGTGGTTTCATGGAGGTCTTCGCAATTCTCCAGCCCAGACTCTTaGAGTGACAACTGGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: IVTVKARPWVVSWRSSQFSSPDS*SDNWMA Trigger: GGCCATCCAGTTGTCACTGCAAGAGTCTGGGCTGGA...GAATTGCGAAGACCTCCATGAAACCACCCATGGCCTTGCCTTTACAGTAACTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
||
| CDS-3UTR CCA 90 bp | ATAGTTACTGTAAAGGCAAGGCCATGGGTGGTTTCATGGAGGTCTTCGCAATTCAGGCATTGTACCCACTaGGTGGTGGGGTTGGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: IVTVKARPWVVSWRSSQFRHCTH*VVGLAS Trigger: AGATGCCAACCCCACCACCCAGTGGGTACAATGCCT...GAATTGCGAAGACCTCCATGAAACCACCCATGGCCTTGCCTTTACAGTAACTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
||
| CDS-3UTR CCA 90 bp | CTTGGCCTAGGACTTCCCTGTACACACTTAGTAGAGAGATTTTGGTTTCTGGTATTGGCACTGGGGTCCTaGCCAGCTGAGTCAAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGLGLPCTHLVERFWFLVLALGS*PAESRS Trigger: TGACCTTGACTCAGCTGGCCAGGACCCCAGTGCCAA...TACCAGAAACCAAAATCTCTCTACTAAGTGTGTACAGGGAAGTCCTAGGCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
||
| CDS-3UTR TCA 90 bp | TTCACTTGGCCTAGGACTTCCCTGTACACACTTAGTAGAGAGATTTTGGTTTCTCGAGAGAACACCATCTaGGACTCCAGACTGAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FTWPRTSLYTLSREILVSRENTI*DSRLRA Trigger: GGCCCTCAGTCTGGAGTCTCAGATGGTGTTCTCTCG...AGAAACCAAAATCTCTCTACTAAGTGTGTACAGGGAAGTCCTAGGCCAAGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR TCA 90 bp | CTTGGCCTAGGACTTCCCTGTACACACTTAGTAGAGAGATTTTGGTTTCTGGTACCTGCTTTGTCAGTCTaGCTGCTCGTTCACAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGLGLPCTHLVERFWFLVPALSV*LLVHSL Trigger: CAGGCTGTGAACGAGCAGTCAGACTGACAAAGCAGG...TACCAGAAACCAAAATCTCTCTACTAAGTGTGTACAGGGAAGTCCTAGGCCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
||
| CDS-3UTR TCA 90 bp | TTCACTTGGCCTAGGACTTCCCTGTACACACTTAGTAGAGAGATTTTGGTTTCTCCCAGACTCTTGCAGTaGCAACTGGATGGCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FTWPRTSLYTLSREILVSPRLLQ*QLDGQE Trigger: CTCCTGGCCATCCAGTTGTCACTGCAAGAGTCTGGG...AGAAACCAAAATCTCTCTACTAAGTGTGTACAGGGAAGTCCTAGGCCAAGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
||
| CDS-3UTR GCA 90 bp | ATAGTTACTGTAAAGGCAAGGCCATGGGTGGTTTCATGGAGGTCTTCGCAATTCGTCACAAGGCTCATGTaGTTCACCAAGGCACTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: IVTVKARPWVVSWRSSQFVTRLM*FTKALP Trigger: TGGGAGTGCCTTGGTGAAGCACATGAGCCTTGTGAC...GAATTGCGAAGACCTCCATGAAACCACCCATGGCCTTGCCTTTACAGTAACTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
||
| CDS-3UTR GCA 90 bp | CATAGTTACTGTAAAGGCAAGGCCATGGGTGGTTTCATGGAGGTCTTCGCAATTTCTTGCCTTTTCTGCTaGACAAGGCATGCTGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HSYCKGKAMGGFMEVFAISCLFC*TRHAAL Trigger: CAGGGCAGCATGCCTTGTGCAGCAGAAAAGGCAAGA...AATTGCGAAGACCTCCATGAAACCACCCATGGCCTTGCCTTTACAGTAACTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR CCA 90 bp | CATAGTTACTGTAAAGGCAAGGCCATGGGTGGTTTCATGGAGGTCTTCGCAATTCTGGCAGCAGTTCTCTaGGTTGGACATCCAAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HSYCKGKAMGGFMEVFAILAAVL*VGHPSF Trigger: GAAGCTTGGATGTCCAACCCAGAGAACTGCTGCCAG...AATTGCGAAGACCTCCATGAAACCACCCATGGCCTTGCCTTTACAGTAACTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR CCA 90 bp | TTCACTTGGCCTAGGACTTCCCTGTACACACTTAGTAGAGAGATTTTGGTTTCTGGTTTGCAGAGCGACTaGCAGGGCTGTAGTCTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: FTWPRTSLYTLSREILVSGLQSD*QGCSLA Trigger: TGCGAGACTACAGCCCTGCCAGTCGCTCTGCAAACC...AGAAACCAAAATCTCTCTACTAAGTGTGTACAGGGAAGTCCTAGGCCAAGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
||
| CDS-3UTR TCA 90 bp | CATAGTTACTGTAAAGGCAAGGCCATGGGTGGTTTCATGGAGGTCTTCGCAATTCGTGCTAAGCGAGGATaGAGGGTTCCTTCAGATATC | + |
|
Preference number: 4 (lower is better) Translates to: HSYCKGKAMGGFMEVFAIRAKRG*RVPSDI Trigger: GATATCTGAAGGAACCCTTCATCCTCGCTTAGCACG...AATTGCGAAGACCTCCATGAAACCACCCATGGCCTTGCCTTTACAGTAACTATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR TCA 90 bp | CATAGTTACTGTAAAGGCAAGGCCATGGGTGGTTTCATGGAGGTCTTCGCAATTTTAGCAATGGGAAGCTaGGTGTGTCAGACCCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: HSYCKGKAMGGFMEVFAILAMGS*VCQTQM Trigger: CATCTGGGTCTGACACACTCAGCTTCCCATTGCTAA...AATTGCGAAGACCTCCATGAAACCACCCATGGCCTTGCCTTTACAGTAACTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR TCA 90 bp | CATAGTTACTGTAAAGGCAAGGCCATGGGTGGTTTCATGGAGGTCTTCGCAATTAAGGAACTCAGAGCCTaGAGAGAGTCCTGGTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: HSYCKGKAMGGFMEVFAIKELRA*RESWFA Trigger: TGCAAACCAGGACTCTCTTCAGGCTCTGAGTTCCTT...AATTGCGAAGACCTCCATGAAACCACCCATGGCCTTGCCTTTACAGTAACTATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR TCA 90 bp | ATCTATCCATTTAGGTTAGGCAAAGGCACGGTAACATGTTGCGTAGGATGTTGTCTACTGTCACCAGCTTaGGACAACTCTTCCCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: IYPFRLGKGTVTCCVGCCLLSPA*DNSSLA Trigger: GGCCAGGGAAGAGTTGTCTCAAGCTGGTGACAGTAG...ACAACATCCTACGCAACATGTTACCGTGCCTTTGCCTAACCTAAATGGATAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR GCA 90 bp | ATAGTTACTGTAAAGGCAAGGCCATGGGTGGTTTCATGGAGGTCTTCGCAATTCGGCCTGGAGCATGTCTaGAGTCTCCACAATAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: IVTVKARPWVVSWRSSQFGLEHV*SLHNKH Trigger: ATGCTTATTGTGGAGACTGCAGACATGCTCCAGGCC...GAATTGCGAAGACCTCCATGAAACCACCCATGGCCTTGCCTTTACAGTAACTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR TCA 90 bp | CATAGTTACTGTAAAGGCAAGGCCATGGGTGGTTTCATGGAGGTCTTCGCAATTTCTACAGGCACGAGTTaGAAGCATTCATATGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HSYCKGKAMGGFMEVFAISTGTS*KHSYAG Trigger: CCCTGCATATGAATGCTTTCAACTCGTGCCTGTAGA...AATTGCGAAGACCTCCATGAAACCACCCATGGCCTTGCCTTTACAGTAACTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR TCA 90 bp | ATCTATCCATTTAGGTTAGGCAAAGGCACGGTAACATGTTGCGTAGGATGTTGTCTGCTCCTAGTCTCATaGGACTGTCACCAAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IYPFRLGKGTVTCCVGCCLLLVS*DCHQAP Trigger: TGGAGCTTGGTGACAGTCTCATGAGACTAGGAGCAG...ACAACATCCTACGCAACATGTTACCGTGCCTTTGCCTAACCTAAATGGATAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR TCA 90 bp | AAACACAGCAGCATTTGCTATCTAGGCAAACCAATTGAACACTTAGTTGTCATAGGGGTCCTGGCCAGCTaGGTCAAGGTCACTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KHSSICYLGKPIEHLVVIGVLAS*VKVTGR Trigger: TCTTCCAGTGACCTTGACTCAGCTGGCCAGGACCCC...TATGACAACTAAGTGTTCAATTGGTTTGCCTAGATAGCAAATGCTGCTGTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR GCA 90 bp | CATAGTTACTGTAAAGGCAAGGCCATGGGTGGTTTCATGGAGGTCTTCGCAATTTGCTCGTTCACAGCCTaGGGTAGGACACCATTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: HSYCKGKAMGGFMEVFAICSFTA*GRTPFN Trigger: ATTAAATGGTGTCCTACCGCAGGCTGTGAACGAGCA...AATTGCGAAGACCTCCATGAAACCACCCATGGCCTTGCCTTTACAGTAACTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR GCA 90 bp | CTTGGCCTAGGACTTCCCTGTACACACTTAGTAGAGAGATTTTGGTTTCTGGTAGATGCCAGGAACTCTTaGCTTTTCTGCTGCACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LGLGLPCTHLVERFWFLVDARNS*LFCCTR Trigger: CCTTGTGCAGCAGAAAAGGCAAGAGTTCCTGGCATC...TACCAGAAACCAAAATCTCTCTACTAAGTGTGTACAGGGAAGTCCTAGGCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR GCA 90 bp | ATAGTTACTGTAAAGGCAAGGCCATGGGTGGTTTCATGGAGGTCTTCGCAATTCACTAATTTCTGTGGTTaGTGCTGGAGGAATCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: IVTVKARPWVVSWRSSQFTNFCG*CWRNQG Trigger: GCCCTGATTCCTCCAGCAGCAACCACAGAAATTAGT...GAATTGCGAAGACCTCCATGAAACCACCCATGGCCTTGCCTTTACAGTAACTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR CCA 90 bp | ATCTATCCATTTAGGTTAGGCAAAGGCACGGTAACATGTTGCGTAGGATGTTGTGGATCTTGTAGTCCTTaGAGTTCTCGGGGAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IYPFRLGKGTVTCCVGCCGSCSP*SSRGRQ Trigger: CTGCCTTCCCCGAGAACTCCAAGGACTACAAGATCC...ACAACATCCTACGCAACATGTTACCGTGCCTTTGCCTAACCTAAATGGATAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR CCA 90 bp | CATAGTTACTGTAAAGGCAAGGCCATGGGTGGTTTCATGGAGGTCTTCGCAATTCAGACTGATTTCATCTaGGGAGGTGACAGAGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: HSYCKGKAMGGFMEVFAIQTDFI*GGDRGS Trigger: AGATCCTCTGTCACCTCCCCAGATGAAATCAGTCTG...AATTGCGAAGACCTCCATGAAACCACCCATGGCCTTGCCTTTACAGTAACTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR CCA 90 bp | CATAGTTACTGTAAAGGCAAGGCCATGGGTGGTTTCATGGAGGTCTTCGCAATTTGGCCAGGAGTATGTTaGGATCATCTTCATCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HSYCKGKAMGGFMEVFAIWPGVC*DHLHPR Trigger: CCTTGGATGAAGATGATCCCAACATACTCCTGGCCA...AATTGCGAAGACCTCCATGAAACCACCCATGGCCTTGCCTTTACAGTAACTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR CCA 90 bp | CATAGTTACTGTAAAGGCAAGGCCATGGGTGGTTTCATGGAGGTCTTCGCAATTCTGAGTCAAGGTCACTaGAAGAGGGACAGAAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: HSYCKGKAMGGFMEVFAILSQGH*KRDRNH Trigger: GTGATTTCTGTCCCTCTTCCAGTGACCTTGACTCAG...AATTGCGAAGACCTCCATGAAACCACCCATGGCCTTGCCTTTACAGTAACTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR TCA 90 bp | ATCTATCCATTTAGGTTAGGCAAAGGCACGGTAACATGTTGCGTAGGATGTTGTGACAATCTGCCCTTCTaGAATCATCTTCCACAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: IYPFRLGKGTVTCCVGCCDNLPF*NHLPQA Trigger: GGCCTGTGGAAGATGATTTCAGAAGGGCAGATTGTC...ACAACATCCTACGCAACATGTTACCGTGCCTTTGCCTAACCTAAATGGATAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR TCA 90 bp | ATCTATCCATTTAGGTTAGGCAAAGGCACGGTAACATGTTGCGTAGGATGTTGTAGACCCAGATGGATTTaGCCCCTGCTTTGTCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IYPFRLGKGTVTCCVGCCRPRWI*PLLCQS Trigger: AGACTGACAAAGCAGGGGTCAAATCCATCTGGGTCT...ACAACATCCTACGCAACATGTTACCGTGCCTTTGCCTAACCTAAATGGATAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
||
| CDS-3UTR TCA 90 bp | AAACACAGCAGCATTTGCTATCTAGGCAAACCAATTGAACACTTAGTTGTCATATCATCGATGCAGAGCTaGCCACAGATGCACCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KHSSICYLGKPIEHLVVISSMQS*PQMHQA Trigger: GGCCTGGTGCATCTGTGGTCAGCTCTGCATCGATGA...TATGACAACTAAGTGTTCAATTGGTTTGCCTAGATAGCAAATGCTGCTGTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR GCA 90 bp | ATCTATCCATTTAGGTTAGGCAAAGGCACGGTAACATGTTGCGTAGGATGTTGTACCACGAGCGACAGATaGCAGGAACTCTTGCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: IYPFRLGKGTVTCCVGCCTTSDR*QELLPF Trigger: AAAAGGCAAGAGTTCCTGGCATCTGTCGCTCGTGGT...ACAACATCCTACGCAACATGTTACCGTGCCTTTGCCTAACCTAAATGGATAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
||
| CDS-3UTR CCA 90 bp | CATAGTTACTGTAAAGGCAAGGCCATGGGTGGTTTCATGGAGGTCTTCGCAATTGAACACCAGTATCTTTaGACACTGAGTCTTCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HSYCKGKAMGGFMEVFAIEHQYL*TLSLLV Trigger: CACCAGAAGACTCAGTGTCCAAAGATACTGGTGTTC...AATTGCGAAGACCTCCATGAAACCACCCATGGCCTTGCCTTTACAGTAACTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
||
| CDS-3UTR CCA 90 bp | AAACACAGCAGCATTTGCTATCTAGGCAAACCAATTGAACACTTAGTTGTCATATCTGAGGGGTTTGACTaGCAGCATCTGGCCTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KHSSICYLGKPIEHLVVISEGFD*QHLACP Trigger: GGGACAGGCCAGATGCTGCCAGTCAAACCCCTCAGA...TATGACAACTAAGTGTTCAATTGGTTTGCCTAGATAGCAAATGCTGCTGTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
||
| CDS-3UTR GCA 90 bp | ATAGTTACTGTAAAGGCAAGGCCATGGGTGGTTTCATGGAGGTCTTCGCAATTCAGAGCTCTACTCAACTaGTCCATCTTTTCTTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IVTVKARPWVVSWRSSQFRALLN*SIFSLA Trigger: AGCCAAAGAAAAGATGGAGCAGTTGAGTAGAGCTCT...GAATTGCGAAGACCTCCATGAAACCACCCATGGCCTTGCCTTTACAGTAACTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
||
| CDS-3UTR GCA 90 bp | ATCTATCCATTTAGGTTAGGCAAAGGCACGGTAACATGTTGCGTAGGATGTTGTCATACTGAATGTACTTaGTCGAGCCAGTCGCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: IYPFRLGKGTVTCCVGCCHTECT*SSQSLE Trigger: CTCAAGCGACTGGCTCGAGCAAGTACATTCAGTATG...ACAACATCCTACGCAACATGTTACCGTGCCTTTGCCTAACCTAAATGGATAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
||
| CDS-3UTR CCA 90 bp | CATAGTTACTGTAAAGGCAAGGCCATGGGTGGTTTCATGGAGGTCTTCGCAATTCTCTCATATTCGCCTTaGTCAAGTTTTGCTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HSYCKGKAMGGFMEVFAILSYSP*SSFAPF Trigger: GAAAGGAGCAAAACTTGACCAAGGCGAATATGAGAG...AATTGCGAAGACCTCCATGAAACCACCCATGGCCTTGCCTTTACAGTAACTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
||
| CDS-3UTR CCA 90 bp | ATCTATCCATTTAGGTTAGGCAAAGGCACGGTAACATGTTGCGTAGGATGTTGTCCACTGTCATCTCCTTaGATTGCTCCTCCACATGTT | + |
|
Preference number: 4 (lower is better) Translates to: IYPFRLGKGTVTCCVGCCPLSSP*IAPPHV Trigger: AACATGTGGAGGAGCAATCCAAGGAGATGACAGTGG...ACAACATCCTACGCAACATGTTACCGTGCCTTTGCCTAACCTAAATGGATAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
||
| CDS-3UTR CCA 90 bp | CTTGGCCTAGGACTTCCCTGTACACACTTAGTAGAGAGATTTTGGTTTCTGGTAGATGAAAGTGGTATCTaGACAGCCTCCTTCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGLGLPCTHLVERFWFLVDESGI*TASFSF Trigger: GAAACTGAAGGAGGCTGTCCAGATACCACTTTCATC...TACCAGAAACCAAAATCTCTCTACTAAGTGTGTACAGGGAAGTCCTAGGCCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
||
| CDS-3UTR TCA 90 bp | CATAGTTACTGTAAAGGCAAGGCCATGGGTGGTTTCATGGAGGTCTTCGCAATTTTCCTTCAGATATCATaGTTTGAGGTCCCATACACA | + |
|
Preference number: 4 (lower is better) Translates to: HSYCKGKAMGGFMEVFAIFLQIS*FEVPYT Trigger: TGTGTATGGGACCTCAAATCATGATATCTGAAGGAA...AATTGCGAAGACCTCCATGAAACCACCCATGGCCTTGCCTTTACAGTAACTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
||
| CDS-3UTR TCA 90 bp | TCCAATAAAGTGTCTCTTAAATACAGCACCGCTGTTGCTAATCAACTGTATTTTTCTGAGACTCCAGACTaGGGGCCAGGTCTTTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SNKVSLKYSTAVANQLYFSETPD*GPGLCA Trigger: AGCACAAAGACCTGGCCCTCAGTCTGGAGTCTCAGA...AAAATACAGTTGATTAGCAACAGCGGTGCTGTATTTAAGAGACACTTTATTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
||
| CDS-3UTR TCA 90 bp | TTCACTTGGCCTAGGACTTCCCTGTACACACTTAGTAGAGAGATTTTGGTTTCTCTCCTTCAGTTTCTTTaGGAGCTCTACTCAACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FTWPRTSLYTLSREILVSLLQFL*ELYSTA Trigger: AGCAGTTGAGTAGAGCTCTCAAAGAAACTGAAGGAG...AGAAACCAAAATCTCTCTACTAAGTGTGTACAGGGAAGTCCTAGGCCAAGTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR TCA 90 bp | ATCTATCCATTTAGGTTAGGCAAAGGCACGGTAACATGTTGCGTAGGATGTTGTGAAGATAAGGCCTATTaGCTTTCTGGGCAAGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IYPFRLGKGTVTCCVGCCEDKAY*LSGQGL Trigger: AAGACCTTGCCCAGAAAGTCAATAGGCCTTATCTTC...ACAACATCCTACGCAACATGTTACCGTGCCTTTGCCTAACCTAAATGGATAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR TCA 90 bp | ATCTATCCATTTAGGTTAGGCAAAGGCACGGTAACATGTTGCGTAGGATGTTGTGCTCTTTCACCTTCATaGACACCAGTATCTTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: IYPFRLGKGTVTCCVGCCALSPS*TPVSLD Trigger: GTCCAAAGATACTGGTGTTCATGAAGGTGAAAGAGC...ACAACATCCTACGCAACATGTTACCGTGCCTTTGCCTAACCTAAATGGATAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR GCA 90 bp | ATCTATCCATTTAGGTTAGGCAAAGGCACGGTAACATGTTGCGTAGGATGTTGTCACTGTAAGATCATCTaGAGACAATCTGCCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IYPFRLGKGTVTCCVGCCHCKII*RQSALL Trigger: CAGAAGGGCAGATTGTCTGCAGATGATCTTACAGTG...ACAACATCCTACGCAACATGTTACCGTGCCTTTGCCTAACCTAAATGGATAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR GCA 90 bp | AAACACAGCAGCATTTGCTATCTAGGCAAACCAATTGAACACTTAGTTGTCATACTGCTGCACAAGGCATaGTGCCCTGATGATCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KHSSICYLGKPIEHLVVILLHKA*CPDDLV Trigger: CACAAGATCATCAGGGCAGCATGCCTTGTGCAGCAG...TATGACAACTAAGTGTTCAATTGGTTTGCCTAGATAGCAAATGCTGCTGTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR GCA 90 bp | TCCAATAAAGTGTCTCTTAAATACAGCACCGCTGTTGCTAATCAACTGTATTTTTTACTGAGCAGGCTATaGACATCTCCTCGACGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SNKVSLKYSTAVANQLYFLLSRL*TSPRRR Trigger: GCGCCGTCGAGGAGATGTGCATAGCCTGCTCAGTAA...AAAATACAGTTGATTAGCAACAGCGGTGCTGTATTTAAGAGACACTTTATTGGA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR GCA 90 bp | AAACACAGCAGCATTTGCTATCTAGGCAAACCAATTGAACACTTAGTTGTCATACAGCACACTCATCGATaGAGAGCTGACCACAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: KHSSICYLGKPIEHLVVIQHTHR*RADHRC Trigger: GCATCTGTGGTCAGCTCTGCATCGATGAGTGTGCTG...TATGACAACTAAGTGTTCAATTGGTTTGCCTAGATAGCAAATGCTGCTGTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR GCA 90 bp | TCCAATAAAGTGTCTCTTAAATACAGCACCGCTGTTGCTAATCAACTGTATTTTCGCAGGGAAGAGCTGTaGAGCACACTCATCGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: SNKVSLKYSTAVANQLYFRREEL*STLIDA Trigger: TGCATCGATGAGTGTGCTGCACAGCTCTTCCCTGCG...AAAATACAGTTGATTAGCAACAGCGGTGCTGTATTTAAGAGACACTTTATTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
||
| CDS-3UTR CCA 90 bp | ATAGTTACTGTAAAGGCAAGGCCATGGGTGGTTTCATGGAGGTCTTCGCAATTCAAATGTCACACAAACTaGTATCTAAATCCCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: IVTVKARPWVVSWRSSQFKCHTN*YLNPQE Trigger: CTCCTGGGGATTTAGATACCAGTTTGTGTGACATTT...GAATTGCGAAGACCTCCATGAAACCACCCATGGCCTTGCCTTTACAGTAACTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
||
| CDS-3UTR CCA 90 bp | CATAGTTACTGTAAAGGCAAGGCCATGGGTGGTTTCATGGAGGTCTTCGCAATTTCCAACGAGTTCTTCTaGCTTCATTTCGGTTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: HSYCKGKAMGGFMEVFAISNEFF*LHFGYL Trigger: AAGATAACCGAAATGAAGCCAGAAGAACTCGTTGGA...AATTGCGAAGACCTCCATGAAACCACCCATGGCCTTGCCTTTACAGTAACTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
||
| CDS-3UTR TCA 90 bp | CATAGTTACTGTAAAGGCAAGGCCATGGGTGGTTTCATGGAGGTCTTCGCAATTAATCTGTCAAGTTCCTaGAACCGTTTATGTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HSYCKGKAMGGFMEVFAINLSSS*NRLCFF Trigger: GAAGAAACATAAACGGTTTCAGGAACTTGACAGATT...AATTGCGAAGACCTCCATGAAACCACCCATGGCCTTGCCTTTACAGTAACTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR TCA 90 bp | TTCACTTGGCCTAGGACTTCCCTGTACACACTTAGTAGAGAGATTTTGGTTTCTCTTATACAAGGAAGCTaGGGCTCAGCACTAATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FTWPRTSLYTLSREILVSLIQGS*GSALIS Trigger: AGAAATTAGTGCTGAGCCTCAGCTTCCTTGTATAAG...AGAAACCAAAATCTCTCTACTAAGTGTGTACAGGGAAGTCCTAGGCCAAGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
||
| CDS-3UTR GCA 90 bp | CATAGTTACTGTAAAGGCAAGGCCATGGGTGGTTTCATGGAGGTCTTCGCAATTCCCATACACAACAAATaGATAGATGTTTCATTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: HSYCKGKAMGGFMEVFAIPIHNK*IDVSLC Trigger: GCACAATGAAACATCTATGCATTTGTTGTGTATGGG...AATTGCGAAGACCTCCATGAAACCACCCATGGCCTTGCCTTTACAGTAACTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR GCA 90 bp | AAACACAGCAGCATTTGCTATCTAGGCAAACCAATTGAACACTTAGTTGTCATAGTGAGCTCGAAGCAGTaGTTCAGCAGTAAACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KHSSICYLGKPIEHLVVIVSSKQ*FSSKQR Trigger: CCTCTGTTTACTGCTGAAGCACTGCTTCGAGCTCAC...TATGACAACTAAGTGTTCAATTGGTTTGCCTAGATAGCAAATGCTGCTGTGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR CCA 90 bp | ATCTATCCATTTAGGTTAGGCAAAGGCACGGTAACATGTTGCGTAGGATGTTGTAGTCATACTTGCACTTaGCACACTGCATGTGATTAC | + |
|
Preference number: 4 (lower is better) Translates to: IYPFRLGKGTVTCCVGCCSHTCT*HTACDY Trigger: GTAATCACATGCAGTGTGCCAAGTGCAAGTATGACT...ACAACATCCTACGCAACATGTTACCGTGCCTTTGCCTAACCTAAATGGATAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| 3UTR CAA 72 bp | AGTCAGCACTGCAGTTATCATGTGAAGGGAACTCCTTaGCATTCAATCCTAACATCAGTGGTTCATAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: SQHCSYHVKGTP*HSILTSVVHNQ Trigger: TTGGTTATGAACCACTGATGTTAGGATTGAATGCAAAGGAGTTCCCTTCACATGATAACTGCAGTGCTGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR TCA 90 bp | AAACACAGCAGCATTTGCTATCTAGGCAAACCAATTGAACACTTAGTTGTCATATTGGCACACTGCATGTaGTTACAGCCTTCGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KHSSICYLGKPIEHLVVILAHCM*LQPSFF Trigger: GAAGAACGAAGGCTGTAATCACATGCAGTGTGCCAA...TATGACAACTAAGTGTTCAATTGGTTTGCCTAGATAGCAAATGCTGCTGTGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
||
| CDS-3UTR TCA 90 bp | TCCAATAAAGTGTCTCTTAAATACAGCACCGCTGTTGCTAATCAACTGTATTTTCCTCCACATGTTGGATaGCTTCATAGCGAGTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SNKVSLKYSTAVANQLYFPPHVG*LHSECI Trigger: GATGCACTCGCTATGAAGTCATCCAACATGTGGAGG...AAAATACAGTTGATTAGCAACAGCGGTGCTGTATTTAAGAGACACTTTATTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR TCA 90 bp | TCCAATAAAGTGTCTCTTAAATACAGCACCGCTGTTGCTAATCAACTGTATTTTGCACTGCATCTTCGATaGAAGTGGTATCTGGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SNKVSLKYSTAVANQLYFALHLR*KWYLDS Trigger: GCTGTCCAGATACCACTTTCATCGAAGATGCAGTGC...AAAATACAGTTGATTAGCAACAGCGGTGCTGTATTTAAGAGACACTTTATTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
||
| CDS-3UTR GCA 90 bp | ATAGTTACTGTAAAGGCAAGGCCATGGGTGGTTTCATGGAGGTCTTCGCAATTCATAGATGTTTCATTGTaGACATTCCGTTTATTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IVTVKARPWVVSWRSSQFIDVSL*TFRLFG Trigger: CCCAAATAAACGGAATGTGCACAATGAAACATCTAT...GAATTGCGAAGACCTCCATGAAACCACCCATGGCCTTGCCTTTACAGTAACTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR GCA 90 bp | ATAGTTACTGTAAAGGCAAGGCCATGGGTGGTTTCATGGAGGTCTTCGCAATTCTTGAAAGCATTCATATaGAGGGCAGAAAATGTTATG | + |
|
Preference number: 4 (lower is better) Translates to: IVTVKARPWVVSWRSSQFLKAFI*RAENVM Trigger: CATAACATTTTCTGCCCTGCATATGAATGCTTTCAA...GAATTGCGAAGACCTCCATGAAACCACCCATGGCCTTGCCTTTACAGTAACTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR CCA 90 bp | TCCAATAAAGTGTCTCTTAAATACAGCACCGCTGTTGCTAATCAACTGTATTTTGGCCTATTGACTTTCTaGGCAAGGTCTTCAGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: SNKVSLKYSTAVANQLYFGLLTF*ARSSVT Trigger: GGTCACTGAAGACCTTGCCCAGAAAGTCAATAGGCC...AAAATACAGTTGATTAGCAACAGCGGTGCTGTATTTAAGAGACACTTTATTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR CCA 90 bp | TCCAATAAAGTGTCTCTTAAATACAGCACCGCTGTTGCTAATCAACTGTATTTTTTCTGTGGTTGCTGCTaGAGGAATCAGGGCGATACT | + |
|
Preference number: 4 (lower is better) Translates to: SNKVSLKYSTAVANQLYFFCGCC*RNQGDT Trigger: AGTATCGCCCTGATTCCTCCAGCAGCAACCACAGAA...AAAATACAGTTGATTAGCAACAGCGGTGCTGTATTTAAGAGACACTTTATTGGA 41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR TCA 90 bp | ATCTATCCATTTAGGTTAGGCAAAGGCACGGTAACATGTTGCGTAGGATGTTGTTCAGATATCATGATTTaGGGTCCCATACACAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: IYPFRLGKGTVTCCVGCCSDIMI*GPIHNK Trigger: TTTGTTGTGTATGGGACCTCAAATCATGATATCTGA...ACAACATCCTACGCAACATGTTACCGTGCCTTTGCCTAACCTAAATGGATAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR CCA 90 bp | TCCAATAAAGTGTCTCTTAAATACAGCACCGCTGTTGCTAATCAACTGTATTTTGAAAGTGCTTTCGCTTaGTTCATCCAGGTCTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SNKVSLKYSTAVANQLYFESAFA*FIQVCR Trigger: CCTACAGACCTGGATGAACCAAGCGAAAGCACTTTC...AAAATACAGTTGATTAGCAACAGCGGTGCTGTATTTAAGAGACACTTTATTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR CCA 90 bp | TCCAATAAAGTGTCTCTTAAATACAGCACCGCTGTTGCTAATCAACTGTATTTTTCTTGCAGTGACAACTaGATGGCCAGGAGTATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SNKVSLKYSTAVANQLYFSCSDN*MARSML Trigger: CAACATACTCCTGGCCATCCAGTTGTCACTGCAAGA...AAAATACAGTTGATTAGCAACAGCGGTGCTGTATTTAAGAGACACTTTATTGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR GCA 90 bp | ATCTATCCATTTAGGTTAGGCAAAGGCACGGTAACATGTTGCGTAGGATGTTGTCAAACACAGAAATACTaGACATACAAATGTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: IYPFRLGKGTVTCCVGCCQTQKY*TYKCHT Trigger: TGTGTGACATTTGTATGTGCAGTATTTCTGTGTTTG...ACAACATCCTACGCAACATGTTACCGTGCCTTTGCCTAACCTAAATGGATAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR CCA 90 bp | AAACACAGCAGCATTTGCTATCTAGGCAAACCAATTGAACACTTAGTTGTCATACAGTTTTTCCATGTTTaGCAGTCACAAGGCTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: KHSSICYLGKPIEHLVVIQFFHV*QSQGSC Trigger: ACATGAGCCTTGTGACTGCCAAACATGGAAAAACTG...TATGACAACTAAGTGTTCAATTGGTTTGCCTAGATAGCAAATGCTGCTGTGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR TCA 90 bp | AAACACAGCAGCATTTGCTATCTAGGCAAACCAATTGAACACTTAGTTGTCATAAAACTACACTTTCTATaGCATCTACAGGCACGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KHSSICYLGKPIEHLVVIKLHFL*HLQARV Trigger: AACTCGTGCCTGTAGATGTCATAGAAAGTGTAGTTT...TATGACAACTAAGTGTTCAATTGGTTTGCCTAGATAGCAAATGCTGCTGTGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR TCA 90 bp | TCCAATAAAGTGTCTCTTAAATACAGCACCGCTGTTGCTAATCAACTGTATTTTATGGATAAGAACACTTaGGGATGCGCCGAGTTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: SNKVSLKYSTAVANQLYFMDKNT*GCAEFL Trigger: TAAAAACTCGGCGCATCCTCAAGTGTTCTTATCCAT...AAAATACAGTTGATTAGCAACAGCGGTGCTGTATTTAAGAGACACTTTATTGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR TCA 90 bp | TCCAATAAAGTGTCTCTTAAATACAGCACCGCTGTTGCTAATCAACTGTATTTTTGCGGGTTCATGTCATaGAACCAAGCCATAATATTG | + |
|
Preference number: 4 (lower is better) Translates to: SNKVSLKYSTAVANQLYFCGFMS*NQAIIL Trigger: CAATATTATGGCTTGGTTTCATGACATGAACCCGCA...AAAATACAGTTGATTAGCAACAGCGGTGCTGTATTTAAGAGACACTTTATTGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR GCA 90 bp | TCCAATAAAGTGTCTCTTAAATACAGCACCGCTGTTGCTAATCAACTGTATTTTATCACCATTGATGAGTaGTTTGCGGAATTTGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SNKVSLKYSTAVANQLYFITIDE*FAEFGG Trigger: ACCACCAAATTCCGCAAAGCACTCATCAATGGTGAT...AAAATACAGTTGATTAGCAACAGCGGTGCTGTATTTAAGAGACACTTTATTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS TCA 90 bp | AGTCTCGCAGGGAAGAGCTGTGCAGCACACTCATCGATGCAGAGCTaGCCACAGATGCACCAGGCCTGCGGCCGCTGCTCCCCTCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SLAGKSCAAHSSMQS*PQMHQACGRCSPLG Trigger: TCCCAGAGGGGAGCAGCGGCCGCAGGCCTGGTGCATCTGTGGTCAGCTCTGCATCGATGAGTGTGCTGCACAGCTCTTCCCTGCGAGACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS GCA 90 bp | AGGGCTGTAGTCTCGCAGGGAAGAGCTGTGCAGCACACTCATCGATaGAGAGCTGACCACAGATGCACCAGGCCTGCGGCCGCTGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RAVVSQGRAVQHTHR*RADHRCTRPAAAAP Trigger: GGGAGCAGCGGCCGCAGGCCTGGTGCATCTGTGGTCAGCTCTGCATCGATGAGTGTGCTGCACAGCTCTTCCCTGCGAGACTACAGCCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS GCA 90 bp | CCAGCAGCTCCGAGCTGCTCAGCGCAGCCCGAGGAGACTCAGTGCTaGGGGGCACAGAGTCCAGTCGGGAAGGTAAAGATGAGCCTATGG | + |
|
Preference number: 5 (lower is better) Translates to: PAAPSCSAQPEETQC*GAQSPVGKVKMSLW Trigger: CCATAGGCTCATCTTTACCTTCCCGACTGGACTCTGTGCCCCGCAGCACTGAGTCTCCTCGGGCTGCGCTGAGCAGCTCGGAGCTGCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS GCA 90 bp | AGCGTGTCCCAGGCATTGTACCCACTGGGTGGTGGGGTTGGCATCTaGACCCCTGACCGCTGGCAGCAGTTCTCTGGGTTGGACATCCAA | + |
|
Preference number: 5 (lower is better) Translates to: SVSQALYPLGGGVGI*TPDRWQQFSGLDIQ Trigger: TTGGATGTCCAACCCAGAGAACTGCTGCCAGCGGTCAGGGGTGCAGATGCCAACCCCACCACCCAGTGGGTACAATGCCTGGGACACGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS GCA 90 bp | GGAAGAGCTGTGCAGCACACTCATCGATGCAGAGCTGACCACAGATaGACCAGGCCTGCGGCCGCTGCTCCCCTCTGGGAGATCGAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: GRAVQHTHRCRADHR*TRPAAAAPLWEIES Trigger: ACTTTCGATCTCCCAGAGGGGAGCAGCGGCCGCAGGCCTGGTGCATCTGTGGTCAGCTCTGCATCGATGAGTGTGCTGCACAGCTCTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
||
| CDS CCA 90 bp | GGGTTGGCATCTGCACCCCTGACCGCTGGCAGCAGTTCTCTGGGTTaGACATCCAAGCTTCAAGCAACTTCTCCCTGTCCCAATCGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GLASAPLTAGSSSLG*TSKLQATSPCPNRE Trigger: CTCACGATTGGGACAGGGAGAAGTTGCTTGAAGCTTGGATGTCCAACCCAGAGAACTGCTGCCAGCGGTCAGGGGTGCAGATGCCAACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
||
| CDS CCA 90 bp | CCAAGGAACTCAGAGCCTGAAGAGAGTCCTGGTTTGCAGAGCGACTaGCAGGGCTGTAGTCTCGCAGGGAAGAGCTGTGCAGCACACTCA | + |
|
Preference number: 5 (lower is better) Translates to: PRNSEPEESPGLQSD*QGCSLAGKSCAAHS Trigger: TGAGTGTGCTGCACAGCTCTTCCCTGCGAGACTACAGCCCTGCCAGTCGCTCTGCAAACCAGGACTCTCTTCAGGCTCTGAGTTCCTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
||
| CDS TCA 90 bp | TCCGCTTCTATTTCTTCGGCCTCCGGGTCCCGAGAGAACACCATCTaGGACTCCAGACTGAGGGCCAGGTCTTTGTGCTGCTGCTTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: SASISSASGSRENTI*DSRLRARSLCCCFS Trigger: CGAAAAGCAGCAGCACAAAGACCTGGCCCTCAGTCTGGAGTCTCAGATGGTGTTCTCTCGGGACCCGGAGGCCGAAGAAATAGAAGCGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
||
| CDS GCA 90 bp | GCAACACCACGAGCGACAGATGCCAGGAACTCTTGCCTTTTCTGCTaGACAAGGCATGCTGCCCTGATGATCTTGTGCCGAGGTGTACGA | + |
|
Preference number: 5 (lower is better) Translates to: ATPRATDARNSCLFC*TRHAALMILCRGVR Trigger: TCGTACACCTCGGCACAAGATCATCAGGGCAGCATGCCTTGTGCAGCAGAAAAGGCAAGAGTTCCTGGCATCTGTCGCTCGTGGTGTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
||
| CDS GCA 90 bp | GGAGCAACACCACGAGCGACAGATGCCAGGAACTCTTGCCTTTTCTaGTGCACAAGGCATGCTGCCCTGATGATCTTGTGCCGAGGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: GATPRATDARNSCLF*CTRHAALMILCRGV Trigger: TACACCTCGGCACAAGATCATCAGGGCAGCATGCCTTGTGCAGCAGAAAAGGCAAGAGTTCCTGGCATCTGTCGCTCGTGGTGTTGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
||
| CDS GCA 90 bp | GAGTCTGCAGGAGCAACACCACGAGCGACAGATGCCAGGAACTCTTaGCTTTTCTGCTGCACAAGGCATGCTGCCCTGATGATCTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: ESAGATPRATDARNS*LFCCTRHAALMILC Trigger: GCACAAGATCATCAGGGCAGCATGCCTTGTGCAGCAGAAAAGGCAAGAGTTCCTGGCATCTGTCGCTCGTGGTGTTGCTCCTGCAGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
||
| CDS GCA 90 bp | CTTTCGCTTGGTTCATCCAGGTCTGTAGGGTTACTGAGCAGGCTATaGACATCTCCTCGACGGCGCTGCTGTCTGTGTCTCCTCCGATAC | + |
|
Preference number: 5 (lower is better) Translates to: LSLGSSRSVGLLSRL*TSPRRRCCLCLLRY Trigger: GTATCGGAGGAGACACAGACAGCAGCGCCGTCGAGGAGATGTGCATAGCCTGCTCAGTAACCCTACAGACCTGGATGAACCAAGCGAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
||
| CDS-3UTR CAA 90 bp | GAGGCCCCTGGAGAGGAGACAGACACCGAGGACAGAACTGTCTGGCCCAACTTCCGCCTTGGTCAAGTTTaGCTCCTTTCCACTGTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: EAPGEETDTEDRTVWPNFRLGQV*LLSTVR Trigger: TCTTACAGTGGAAAGGAGCAAAACTTGACCAAGGCG...GAAGTTGGGCCAGACAGTTCTGTCCTCGGTGTCTGTCTCCTCTCCAGGGGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
||
| CDS GCA 90 bp | AGCAATGGGAAGCTGAGTGTGTCAGACCCAGATGGATTTGACCCCTaGTTTGTCAGTCTGACTGCTCGTTCACAGCCTGCGGTAGGACAC | + |
|
Preference number: 5 (lower is better) Translates to: SNGKLSVSDPDGFDP*FVSLTARSQPAVGH Trigger: GTGTCCTACCGCAGGCTGTGAACGAGCAGTCAGACTGACAAAGCAGGGGTCAAATCCATCTGGGTCTGACACACTCAGCTTCCCATTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS CCA 90 bp | CAGACTGATTTCATCTGGGGAGGTGACAGAGGATCTTGTAGTCCTTaGAGTTCTCGGGGAAGGCAGCGTGTCCCAGGCATTGTACCCACT | + |
|
Preference number: 5 (lower is better) Translates to: QTDFIWGGDRGSCSP*SSRGRQRVPGIVPT Trigger: AGTGGGTACAATGCCTGGGACACGCTGCCTTCCCCGAGAACTCCAAGGACTACAAGATCCTCTGTCACCTCCCCAGATGAAATCAGTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS TCA 90 bp | TCAAAGTGTCAGTTGAAAATGGGTCACTGTCTGCTCCTAGTCTCATaGGACTGTCACCAAGCTCCAGCAGCTCCGAGCTGCTCAGCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SKCQLKMGHCLLLVS*DCHQAPAAPSCSAQ Trigger: CTGCGCTGAGCAGCTCGGAGCTGCTGGAGCTTGGTGACAGTCTCATGAGACTAGGAGCAGACAGTGACCCATTTTCAACTGACACTTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS GCA 90 bp | AGCGACAGATGCCAGGAACTCTTGCCTTTTCTGCTGCACAAGGCATaGTGCCCTGATGATCTTGTGCCGAGGTGTACGAAGATAAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SDRCQELLPFLLHKA*CPDDLVPRCTKIRP Trigger: AGGCCTTATCTTCGTACACCTCGGCACAAGATCATCAGGGCAGCATGCCTTGTGCAGCAGAAAAGGCAAGAGTTCCTGGCATCTGTCGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS GCA 90 bp | TCTGTAGGGTTACTGAGCAGGCTATGCACATCTCCTCGACGGCGCTaGTGTCTGTGTCTCCTCCGATACTCAGGTGAAGCAAATCCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: SVGLLSRLCTSPRRR*CLCLLRYSGEANPK Trigger: TTTAGGATTTGCTTCACCTGAGTATCGGAGGAGACACAGACAGCAGCGCCGTCGAGGAGATGTGCATAGCCTGCTCAGTAACCCTACAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS CCA 90 bp | CCAGCCCAGACTCTTGCAGTGACAACTGGATGGCCAGGAGTATGTTaGGATCATCTTCATCCAAGGAACTCAGAGCCTGAAGAGAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PAQTLAVTTGWPGVC*DHLHPRNSEPEESP Trigger: AGGACTCTCTTCAGGCTCTGAGTTCCTTGGATGAAGATGATCCCAACATACTCCTGGCCATCCAGTTGTCACTGCAAGAGTCTGGGCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS GCA 90 bp | GACAGATGCCAGGAACTCTTGCCTTTTCTGCTGCACAAGGCATGCTaGCCTGATGATCTTGTGCCGAGGTGTACGAAGATAAGGCCTATT | + |
|
Preference number: 5 (lower is better) Translates to: DRCQELLPFLLHKAC*PDDLVPRCTKIRPI Trigger: AATAGGCCTTATCTTCGTACACCTCGGCACAAGATCATCAGGGCAGCATGCCTTGTGCAGCAGAAAAGGCAAGAGTTCCTGGCATCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS CCA 90 bp | CTGGTCTCTTCATCCATGTCCAGCCCAGACTCTTGCAGTGACAACTaGATGGCCAGGAGTATGTTGGGATCATCTTCATCCAAGGAACTC | + |
|
Preference number: 5 (lower is better) Translates to: LVSSSMSSPDSCSDN*MARSMLGSSSSKEL Trigger: GAGTTCCTTGGATGAAGATGATCCCAACATACTCCTGGCCATCCAGTTGTCACTGCAAGAGTCTGGGCTGGACATGGATGAAGAGACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR CAA 90 bp | TTCACTTGGCCTAGGACTTCCCTGTACACACTTAGTAGAGAGATTTTGGTTTCTAGCGTGTCCCAGGCATaGTACCCACTGGGTGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: FTWPRTSLYTLSREILVSSVSQA*YPLGGG Trigger: CCCACCACCCAGTGGGTACAATGCCTGGGACACGCT...AGAAACCAAAATCTCTCTACTAAGTGTGTACAGGGAAGTCCTAGGCCAAGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS TCA 90 bp | CAGCCTCCACTGTCATCTCCTTGGATTGCTCCTCCACATGTTGGATaGCTTCATAGCGAGTGCATCTGTAGTAACCTCCAGTGGAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: QPPLSSPWIAPPHVG*LHSECICSNLQWKN Trigger: GTTCTTCCACTGGAGGTTACTACAGATGCACTCGCTATGAAGTCATCCAACATGTGGAGGAGCAATCCAAGGAGATGACAGTGGAGGCTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS TCA 90 bp | CATCTGGGCTCTTTCACCTTCATGAACACCAGTATCTTTGGACACTaGGTCTTCTGGTGGCACGAGTTCCATGTCCCTCACACCTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: HLGSFTFMNTSIFGH*VFWWHEFHVPHTFR Trigger: TCTGAAGGTGTGAGGGACATGGAACTCGTGCCACCAGAAGACTCAGTGTCCAAAGATACTGGTGTTCATGAAGGTGAAAGAGCCCAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS GCA 90 bp | CTAAGGAAGTCTCTGGTCTCTTCATCCATGTCCAGCCCAGACTCTTaGAGTGACAACTGGATGGCCAGGAGTATGTTGGGATCATCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LRKSLVSSSMSSPDS*SDNWMARSMLGSSS Trigger: TGAAGATGATCCCAACATACTCCTGGCCATCCAGTTGTCACTGCAAGAGTCTGGGCTGGACATGGATGAAGAGACCAGAGACTTCCTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS CCA 90 bp | TCTCTTCATCCATGTCCAGCCCAGACTCTTGCAGTGACAACTGGATaGCCAGGAGTATGTTGGGATCATCTTCATCCAAGGAACTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SLHPCPAQTLAVTTG*PGVCWDHLHPRNSE Trigger: CTCTGAGTTCCTTGGATGAAGATGATCCCAACATACTCCTGGCCATCCAGTTGTCACTGCAAGAGTCTGGGCTGGACATGGATGAAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS CCA 90 bp | CCACTGCCTCGTTACTACTGTCACCAGCTTGAGACAACTCTTCCCTaGCCAGAATATTCTCTTCCAGAGGATTTTCTTCCATCTGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PLPRYYCHQLETTLP*PEYSLPEDFLPSGL Trigger: GAGCCCAGATGGAAGAAAATCCTCTGGAAGAGAATATTCTGGCCAGGGAAGAGTTGTCTCAAGCTGGTGACAGTAGTAACGAGGCAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR CAA 90 bp | ATCTATCCATTTAGGTTAGGCAAAGGCACGGTAACATGTTGCGTAGGATGTTGTCAGAAGAGGTGTCCTTaGCCGCAGTCCACAGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: IYPFRLGKGTVTCCVGCCQKRCP*PQSTAG Trigger: CCCTGCTGTGGACTGCGGCAAAGGACACCTCTTCTG...ACAACATCCTACGCAACATGTTACCGTGCCTTTGCCTAACCTAAATGGATAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR CAA 90 bp | ATAGTTACTGTAAAGGCAAGGCCATGGGTGGTTTCATGGAGGTCTTCGCAATTCCCAAGAAGATTGTCATaGGCACTGGGGTCCTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: IVTVKARPWVVSWRSSQFPRRLS*ALGSWP Trigger: TGGCCAGGACCCCAGTGCCAATGACAATCTTCTTGG...GAATTGCGAAGACCTCCATGAAACCACCCATGGCCTTGCCTTTACAGTAACTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS TCA 90 bp | TTGCTCCTTTCCACTGTAAGATCATCTGCAGACAATCTGCCCTTCTaGAATCATCTTCCACAGGCCGTGCTAAGCGAGGATGAAGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLLSTVRSSADNLPF*NHLPQAVLSEDEGF Trigger: GAACCCTTCATCCTCGCTTAGCACGGCCTGTGGAAGATGATTTCAGAAGGGCAGATTGTCTGCAGATGATCTTACAGTGGAAAGGAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS TCA 90 bp | AATATTGCCAAGAAGATTGTCATTGGCACTGGGGTCCTGGCCAGCTaGGTCAAGGTCACTGGAAGAGGGACAGAAATCACTTCTTGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: NIAKKIVIGTGVLAS*VKVTGRGTEITSCL Trigger: GAGACAAGAAGTGATTTCTGTCCCTCTTCCAGTGACCTTGACTCAGCTGGCCAGGACCCCAGTGCCAATGACAATCTTCTTGGCAATATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS GCA 90 bp | ATCTCTTATACAAGGAAGCTGAGGCTCAGCACTAATTTCTGTGGTTaGTGCTGGAGGAATCAGGGCGATACTCTGCGGGTTCATGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: ISYTRKLRLSTNFCG*CWRNQGDTLRVHVM Trigger: CATGACATGAACCCGCAGAGTATCGCCCTGATTCCTCCAGCAGCAACCACAGAAATTAGTGCTGAGCCTCAGCTTCCTTGTATAAGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS CCA 90 bp | TATACAAGGAAGCTGAGGCTCAGCACTAATTTCTGTGGTTGCTGCTaGAGGAATCAGGGCGATACTCTGCGGGTTCATGTCATGAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: YTRKLRLSTNFCGCC*RNQGDTLRVHVMKP Trigger: TGGTTTCATGACATGAACCCGCAGAGTATCGCCCTGATTCCTCCAGCAGCAACCACAGAAATTAGTGCTGAGCCTCAGCTTCCTTGTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS CCA 90 bp | TTTCTTCCATCTGGGCTCTTTCACCTTCATGAACACCAGTATCTTTaGACACTGAGTCTTCTGGTGGCACGAGTTCCATGTCCCTCACAC | + |
|
Preference number: 5 (lower is better) Translates to: FLPSGLFHLHEHQYL*TLSLLVARVPCPSH Trigger: GTGTGAGGGACATGGAACTCGTGCCACCAGAAGACTCAGTGTCCAAAGATACTGGTGTTCATGAAGGTGAAAGAGCCCAGATGGAAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS GCA 90 bp | TCTTATACAAGGAAGCTGAGGCTCAGCACTAATTTCTGTGGTTGCTaGTGGAGGAATCAGGGCGATACTCTGCGGGTTCATGTCATGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SYTRKLRLSTNFCGC*WRNQGDTLRVHVMK Trigger: TTTCATGACATGAACCCGCAGAGTATCGCCCTGATTCCTCCAGCAGCAACCACAGAAATTAGTGCTGAGCCTCAGCTTCCTTGTATAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR CAA 90 bp | CTTGGCCTAGGACTTCCCTGTACACACTTAGTAGAGAGATTTTGGTTTCTGGTACAGACCCAGATGGATTaGACCCCTGCTTTGTCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LGLGLPCTHLVERFWFLVQTQMD*TPALSV Trigger: GACTGACAAAGCAGGGGTCAAATCCATCTGGGTCTG...TACCAGAAACCAAAATCTCTCTACTAAGTGTGTACAGGGAAGTCCTAGGCCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR CAA 90 bp | ATAGTTACTGTAAAGGCAAGGCCATGGGTGGTTTCATGGAGGTCTTCGCAATTCCAGTTCGCACAAGGCTaGGAGTTAGTTAACAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: IVTVKARPWVVSWRSSQFQFAQG*ELVNSH Trigger: GTGGCTGTTAACTAACTCCAAGCCTTGTGCGAACTG...GAATTGCGAAGACCTCCATGAAACCACCCATGGCCTTGCCTTTACAGTAACTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR CAA 90 bp | ATAGTTACTGTAAAGGCAAGGCCATGGGTGGTTTCATGGAGGTCTTCGCAATTCTCCACTGTCATCTCCTaGGATTGCTCCTCCACATGT | + |
|
Preference number: 5 (lower is better) Translates to: IVTVKARPWVVSWRSSQFSTVIS*DCSSTC Trigger: ACATGTGGAGGAGCAATCCAAGGAGATGACAGTGGA...GAATTGCGAAGACCTCCATGAAACCACCCATGGCCTTGCCTTTACAGTAACTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS TCA 90 bp | AGTCAAGGTCACTGGAAGAGGGACAGAAATCACTTCTTGTCTCACTaGGAGGGCGTGAACTCAAAGTGTCAGTTGAAAATGGGTCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: SQGHWKRDRNHFLSH*EGVNSKCQLKMGHC Trigger: ACAGTGACCCATTTTCAACTGACACTTTGAGTTCACGCCCTCTCAGTGAGACAAGAAGTGATTTCTGTCCCTCTTCCAGTGACCTTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS TCA 90 bp | TTCTCTTCCAGAGGATTTTCTTCCATCTGGGCTCTTTCACCTTCATaGACACCAGTATCTTTGGACACTGAGTCTTCTGGTGGCACGAGT | + |
|
Preference number: 5 (lower is better) Translates to: FSSRGFSSIWALSPS*TPVSLDTESSGGTS Trigger: ACTCGTGCCACCAGAAGACTCAGTGTCCAAAGATACTGGTGTTCATGAAGGTGAAAGAGCCCAGATGGAAGAAAATCCTCTGGAAGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS CCA 90 bp | TCTGCAGTCTCCACAATAAGCATATCTTTTAACCTACGAAGATCCTaGGGCCTTAGTCCTTCATATGGCTCTCGCTTGTCTAAGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SAVSTISISFNLRRS*GLSPSYGSRLSKAA Trigger: TGCTGCCTTAGACAAGCGAGAGCCATATGAAGGACTAAGGCCCCAGGATCTTCGTAGGTTAAAAGATATGCTTATTGTGGAGACTGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS CCA 90 bp | TCTGGCTTCATTTCGGTTATCTTTTGTAACCAGTTTTTCCATGTTTaGCAGTCACAAGGCTCATGTGCTTCACCAAGGCACTCCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SGFISVIFCNQFFHV*QSQGSCASPRHSQQ Trigger: CTGCTGGGAGTGCCTTGGTGAAGCACATGAGCCTTGTGACTGCCAAACATGGAAAAACTGGTTACAAAAGATAACCGAAATGAAGCCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS-3UTR CAA 90 bp | ATAGTTACTGTAAAGGCAAGGCCATGGGTGGTTTCATGGAGGTCTTCGCAATTCATATTGCCAAGAAGATaGTCATTGGCACTGGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: IVTVKARPWVVSWRSSQFILPRR*SLALGS Trigger: GGACCCCAGTGCCAATGACAATCTTCTTGGCAATAT...GAATTGCGAAGACCTCCATGAAACCACCCATGGCCTTGCCTTTACAGTAACTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR CAA 90 bp | TTCACTTGGCCTAGGACTTCCCTGTACACACTTAGTAGAGAGATTTTGGTTTCTACTACTGTCACCAGCTaGAGACAACTCTTCCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: FTWPRTSLYTLSREILVSTTVTS*RQLFPG Trigger: GCCAGGGAAGAGTTGTCTCAAGCTGGTGACAGTAGT...AGAAACCAAAATCTCTCTACTAAGTGTGTACAGGGAAGTCCTAGGCCAAGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR CAA 90 bp | CATAGTTACTGTAAAGGCAAGGCCATGGGTGGTTTCATGGAGGTCTTCGCAATTCCATTGATGAGTGCTTaGCGGAATTTGGTGGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: HSYCKGKAMGGFMEVFAIPLMSA*RNLVVV Trigger: TACAACCACCAAATTCCGCAAAGCACTCATCAATGG...AATTGCGAAGACCTCCATGAAACCACCCATGGCCTTGCCTTTACAGTAACTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR CAA 90 bp | TTCACTTGGCCTAGGACTTCCCTGTACACACTTAGTAGAGAGATTTTGGTTTCTTCATATGGCTCTCGCTaGTCTAAGGCAGCATACTCC | + |
|
Preference number: 5 (lower is better) Translates to: FTWPRTSLYTLSREILVSSYGSR*SKAAYS Trigger: GGAGTATGCTGCCTTAGACAAGCGAGAGCCATATGA...AGAAACCAAAATCTCTCTACTAAGTGTGTACAGGGAAGTCCTAGGCCAAGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR CAA 90 bp | ATCTATCCATTTAGGTTAGGCAAAGGCACGGTAACATGTTGCGTAGGATGTTGTTTGCTCCTCCACATGTaGGATGACTTCATAGCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: IYPFRLGKGTVTCCVGCCLLLHM*DDFIAS Trigger: ACTCGCTATGAAGTCATCCAACATGTGGAGGAGCAA...ACAACATCCTACGCAACATGTTACCGTGCCTTTGCCTAACCTAAATGGATAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR CAA 90 bp | ATCTATCCATTTAGGTTAGGCAAAGGCACGGTAACATGTTGCGTAGGATGTTGTATGGCCAGGAGTATGTaGGGATCATCTTCATCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: IYPFRLGKGTVTCCVGCCMARSM*GSSSSK Trigger: CTTGGATGAAGATGATCCCAACATACTCCTGGCCAT...ACAACATCCTACGCAACATGTTACCGTGCCTTTGCCTAACCTAAATGGATAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS GCA 90 bp | GTATCTGGACAGCCTCCTTCAGTTTCTTTGAGAGCTCTACTCAACTaGTCCATCTTTTCTTTGGCTGTTTTAAGAAGGCGTTGTTCTAAC | + |
|
Preference number: 5 (lower is better) Translates to: VSGQPPSVSLRALLN*SIFSLAVLRRRCSN Trigger: GTTAGAACAACGCCTTCTTAAAACAGCCAAAGAAAAGATGGAGCAGTTGAGTAGAGCTCTCAAAGAAACTGAAGGAGGCTGTCCAGATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS-3UTR CAA 90 bp | AAACACAGCAGCATTTGCTATCTAGGCAAACCAATTGAACACTTAGTTGTCATACAGCAGTTCTCTGGGTaGGACATCCAAGCTTCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: KHSSICYLGKPIEHLVVIQQFSG*DIQASS Trigger: GCTTGAAGCTTGGATGTCCAACCCAGAGAACTGCTG...TATGACAACTAAGTGTTCAATTGGTTTGCCTAGATAGCAAATGCTGCTGTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR CAA 90 bp | TTCACTTGGCCTAGGACTTCCCTGTACACACTTAGTAGAGAGATTTTGGTTTCTATCTACAGGCACGAGTaGAAAGCATTCATATGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FTWPRTSLYTLSREILVSIYRHE*KAFICR Trigger: CCTGCATATGAATGCTTTCAACTCGTGCCTGTAGAT...AGAAACCAAAATCTCTCTACTAAGTGTGTACAGGGAAGTCCTAGGCCAAGTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR CAA 90 bp | TTCACTTGGCCTAGGACTTCCCTGTACACACTTAGTAGAGAGATTTTGGTTTCTCTTCGTTCTTCTGTATaGGAGACTTACAGTTCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: FTWPRTSLYTLSREILVSLRSSV*ETYSSH Trigger: GTGCGAACTGTAAGTCTCCAATACAGAAGAACGAAG...AGAAACCAAAATCTCTCTACTAAGTGTGTACAGGGAAGTCCTAGGCCAAGTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS CCA 90 bp | TTTTTGTTATCAACGGCATCAATAGCCGCTCTCTCATATTCGCCTTaGTCAAGTTTTGCTCCTTTCCACTGTAAGATCATCTGCAGACAA | + |
|
Preference number: 5 (lower is better) Translates to: FLLSTASIAALSYSP*SSFAPFHCKIICRQ Trigger: TTGTCTGCAGATGATCTTACAGTGGAAAGGAGCAAAACTTGACCAAGGCGAATATGAGAGAGCGGCTATTGATGCCGTTGATAACAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS CCA 90 bp | CTCCCAACAGCCTCTACAAAAATCATGTCCACAGGGCATATCCACTaGATCTTCAAACACAGAAATACTGCACATACAAATGTCACACAA | + |
|
Preference number: 5 (lower is better) Translates to: LPTASTKIMSTGHIH*IFKHRNTAHTNVTQ Trigger: TTGTGTGACATTTGTATGTGCAGTATTTCTGTGTTTGAAGATCCAGTGGATATGCCCTGTGGACATGATTTTTGTAGAGGCTGTTGGGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS-3UTR CAA 90 bp | TTCACTTGGCCTAGGACTTCCCTGTACACACTTAGTAGAGAGATTTTGGTTTCTAACTCAAAGTGTCAGTaGAAAATGGGTCACTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FTWPRTSLYTLSREILVSNSKCQ*KMGHCL Trigger: CAGACAGTGACCCATTTTCAACTGACACTTTGAGTT...AGAAACCAAAATCTCTCTACTAAGTGTGTACAGGGAAGTCCTAGGCCAAGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS TCA 90 bp | ATCTCCTTAGAAACTACACTTTCTATGACATCTACAGGCACGAGTTaGAAGCATTCATATGCAGGGCAGAAAATGTTATGGGCTTCACCT | + |
|
Preference number: 5 (lower is better) Translates to: ISLETTLSMTSTGTS*KHSYAGQKMLWASP Trigger: AGGTGAAGCCCATAACATTTTCTGCCCTGCATATGAATGCTTTCAACTCGTGCCTGTAGATGTCATAGAAAGTGTAGTTTCTAAGGAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS-3UTR CAA 90 bp | CTTGGCCTAGGACTTCCCTGTACACACTTAGTAGAGAGATTTTGGTTTCTGGTAAAATTTTCATCACCATaGATGAGTGCTTTGCGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LGLGLPCTHLVERFWFLVKFSSP*MSALRN Trigger: ATTCCGCAAAGCACTCATCAATGGTGATGAAAATTT...TACCAGAAACCAAAATCTCTCTACTAAGTGTGTACAGGGAAGTCCTAGGCCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS GCA 90 bp | TACACTTTCTATGACATCTACAGGCACGAGTTGAAAGCATTCATATaGAGGGCAGAAAATGTTATGGGCTTCACCTTCTTGAATTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: YTFYDIYRHELKAFI*RAENVMGFTFLNFQ Trigger: CTGAAAATTCAAGAAGGTGAAGCCCATAACATTTTCTGCCCTGCATATGAATGCTTTCAACTCGTGCCTGTAGATGTCATAGAAAGTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS-3UTR CAA 90 bp | ATCTATCCATTTAGGTTAGGCAAAGGCACGGTAACATGTTGCGTAGGATGTTGTTTCAGATATCATGATTaGAGGTCCCATACACAACAA | + |
|
Preference number: 5 (lower is better) Translates to: IYPFRLGKGTVTCCVGCCFRYHD*RSHTQQ Trigger: TTGTTGTGTATGGGACCTCAAATCATGATATCTGAA...ACAACATCCTACGCAACATGTTACCGTGCCTTTGCCTAACCTAAATGGATAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR CAA 90 bp | TCCAATAAAGTGTCTCTTAAATACAGCACCGCTGTTGCTAATCAACTGTATTTTCCAGTTTTTCCATGTTaGGCAGTCACAAGGCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: SNKVSLKYSTAVANQLYFPVFPC*AVTRLM Trigger: CATGAGCCTTGTGACTGCCAAACATGGAAAAACTGG...AAAATACAGTTGATTAGCAACAGCGGTGCTGTATTTAAGAGACACTTTATTGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR CAA 90 bp | TCCAATAAAGTGTCTCTTAAATACAGCACCGCTGTTGCTAATCAACTGTATTTTCAGCAAAAGTCATACTaGCACTTGGCACACTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: SNKVSLKYSTAVANQLYFQQKSY*HLAHCM Trigger: CATGCAGTGTGCCAAGTGCAAGTATGACTTTTGCTG...AAAATACAGTTGATTAGCAACAGCGGTGCTGTATTTAAGAGACACTTTATTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
||
| CDS-3UTR CAA 90 bp | AAACACAGCAGCATTTGCTATCTAGGCAAACCAATTGAACACTTAGTTGTCATATGCTCCATCTTTTCTTaGGCTGTTTTAAGAAGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: KHSSICYLGKPIEHLVVICSIFS*AVLRRR Trigger: ACGCCTTCTTAAAACAGCCAAAGAAAAGATGGAGCA...TATGACAACTAAGTGTTCAATTGGTTTGCCTAGATAGCAAATGCTGCTGTGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR CAA 90 bp | TCCAATAAAGTGTCTCTTAAATACAGCACCGCTGTTGCTAATCAACTGTATTTTGCACATTCCGTTTATTaGGGTTTCCATCTCTACCAA | + |
|
Preference number: 5 (lower is better) Translates to: SNKVSLKYSTAVANQLYFAHSVY*GFHLYQ Trigger: TTGGTAGAGATGGAAACCCAAATAAACGGAATGTGC...AAAATACAGTTGATTAGCAACAGCGGTGCTGTATTTAAGAGACACTTTATTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR CAA 90 bp | AAACACAGCAGCATTTGCTATCTAGGCAAACCAATTGAACACTTAGTTGTCATAAACTGTAGGTATCGTTaGTCCATCTCCTTAGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: KHSSICYLGKPIEHLVVINCRYR*SISLET Trigger: AGTTTCTAAGGAGATGGACAAACGATACCTACAGTT...TATGACAACTAAGTGTTCAATTGGTTTGCCTAGATAGCAAATGCTGCTGTGTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS-3UTR CAA 90 bp | AAACACAGCAGCATTTGCTATCTAGGCAAACCAATTGAACACTTAGTTGTCATAAACCAAGCCATAATATaGCCAAGAAGATTGTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: KHSSICYLGKPIEHLVVINQAII*PRRLSL Trigger: CAATGACAATCTTCTTGGCAATATTATGGCTTGGTT...TATGACAACTAAGTGTTCAATTGGTTTGCCTAGATAGCAAATGCTGCTGTGTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS GCA 72 bp | GCTCCGAGCTGCTCAGCGCAGCCCGAGGAGACTCAGTaGTGCGGGGCACAGAGTCCAGTCGGGAAGGTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: APSCSAQPEETQ*CGAQSPVGKVK Trigger: CTTTACCTTCCCGACTGGACTCTGTGCCCCGCAGCACTGAGTCTCCTCGGGCTGCGCTGAGCAGCTCGGAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS TCA 72 bp | GGGAAGAGCTGTGCAGCACACTCATCGATGCAGAGCTaGCCACAGATGCACCAGGCCTGCGGCCGCTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GKSCAAHSSMQS*PQMHQACGRCS Trigger: GGAGCAGCGGCCGCAGGCCTGGTGCATCTGTGGTCAGCTCTGCATCGATGAGTGTGCTGCACAGCTCTTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS GCA 72 bp | CAGGCATTGTACCCACTGGGTGGTGGGGTTGGCATCTaGACCCCTGACCGCTGGCAGCAGTTCTCTGGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: QALYPLGGGVGI*TPDRWQQFSGL Trigger: CAACCCAGAGAACTGCTGCCAGCGGTCAGGGGTGCAGATGCCAACCCCACCACCCAGTGGGTACAATGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS TCA 72 bp | TGTTCCACCGGCAAAGCTGCGCCTGGGAGCATCTGGTaGGTCTGCAGGAGCAACACCACGAGCGACAGATGC | + |
|
Preference number: 6 (lower is better) Translates to: CSTGKAAPGSIW*VCRSNTTSDRC Trigger: GCATCTGTCGCTCGTGGTGTTGCTCCTGCAGACTCACCAGATGCTCCCAGGCGCAGCTTTGCCGGTGGAACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS TCA 72 bp | CCGGGTCCCGAGAGAACACCATCTGAGACTCCAGACTaGGGGCCAGGTCTTTGTGCTGCTGCTTTTCGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: PGPERTPSETPD*GPGLCAAAFRH Trigger: GTGCCGAAAAGCAGCAGCACAAAGACCTGGCCCTCAGTCTGGAGTCTCAGATGGTGTTCTCTCGGGACCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS CAA 72 bp | GCTTCACCAAGGCACTCCCAGCAGAAGAGGTGTCCTTaGCCGCAGTCCACAGCAGGGGCTCTTAGCAATGGG | + |
|
Preference number: 6 (lower is better) Translates to: ASPRHSQQKRCP*PQSTAGALSNG Trigger: CCCATTGCTAAGAGCCCCTGCTGTGGACTGCGGCAAAGGACACCTCTTCTGCTGGGAGTGCCTTGGTGAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS GCA 72 bp | CTTCACCAAGGCACTCCCAGCAGAAGAGGTGTCCTTTaGCGCAGTCCACAGCAGGGGCTCTTAGCAATGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LHQGTPSRRGVL*RSPQQGLLAMG Trigger: TCCCATTGCTAAGAGCCCCTGCTGTGGACTGCGGCAAAGGACACCTCTTCTGCTGGGAGTGCCTTGGTGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS CCA 72 bp | TCTGCACCCCTGACCGCTGGCAGCAGTTCTCTGGGTTaGACATCCAAGCTTCAAGCAACTTCTCCCTGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: SAPLTAGSSSLG*TSKLQATSPCP Trigger: GGGACAGGGAGAAGTTGCTTGAAGCTTGGATGTCCAACCCAGAGAACTGCTGCCAGCGGTCAGGGGTGCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS CCA 72 bp | TCAGAGCCTGAAGAGAGTCCTGGTTTGCAGAGCGACTaGCAGGGCTGTAGTCTCGCAGGGAAGAGCTGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SEPEESPGLQSD*QGCSLAGKSCA Trigger: TGCACAGCTCTTCCCTGCGAGACTACAGCCCTGCCAGTCGCTCTGCAAACCAGGACTCTCTTCAGGCTCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS GCA 72 bp | GGAGCAACACCACGAGCGACAGATGCCAGGAACTCTTaGCTTTTCTGCTGCACAAGGCATGCTGCCCTGATG | + |
|
Preference number: 6 (lower is better) Translates to: GATPRATDARNS*LFCCTRHAALM Trigger: CATCAGGGCAGCATGCCTTGTGCAGCAGAAAAGGCAAGAGTTCCTGGCATCTGTCGCTCGTGGTGTTGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS GCA 72 bp | ATCCAAGGAACTCAGAGCCTGAAGAGAGTCCTGGTTTaGAGAGCGACTGGCAGGGCTGTAGTCTCGCAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: IQGTQSLKRVLV*RATGRAVVSQG Trigger: TCCCTGCGAGACTACAGCCCTGCCAGTCGCTCTGCAAACCAGGACTCTCTTCAGGCTCTGAGTTCCTTGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS CAA 72 bp | ATCTGCACCCCTGACCGCTGGCAGCAGTTCTCTGGGTaGGACATCCAAGCTTCAAGCAACTTCTCCCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: ICTPDRWQQFSG*DIQASSNFSLS Trigger: GGACAGGGAGAAGTTGCTTGAAGCTTGGATGTCCAACCCAGAGAACTGCTGCCAGCGGTCAGGGGTGCAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS GCA 72 bp | TTACTGAGCAGGCTATGCACATCTCCTCGACGGCGCTaGTGTCTGTGTCTCCTCCGATACTCAGGTGAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LLSRLCTSPRRR*CLCLLRYSGEA Trigger: TGCTTCACCTGAGTATCGGAGGAGACACAGACAGCAGCGCCGTCGAGGAGATGTGCATAGCCTGCTCAGTAA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS TCA 72 bp | CAGTTGAAAATGGGTCACTGTCTGCTCCTAGTCTCATaGGACTGTCACCAAGCTCCAGCAGCTCCGAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: QLKMGHCLLLVS*DCHQAPAAPSC Trigger: GCAGCTCGGAGCTGCTGGAGCTTGGTGACAGTCTCATGAGACTAGGAGCAGACAGTGACCCATTTTCAACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS TCA 72 bp | CCCCTGCCCACTGCCTCGTTACTACTGTCACCAGCTTaGGACAACTCTTCCCTGGCCAGAATATTCTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: PLPTASLLLSPA*DNSSLARIFSS Trigger: GGAAGAGAATATTCTGGCCAGGGAAGAGTTGTCTCAAGCTGGTGACAGTAGTAACGAGGCAGTGGGCAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS GCA 72 bp | AAGCTGAGTGTGTCAGACCCAGATGGATTTGACCCCTaGTTTGTCAGTCTGACTGCTCGTTCACAGCCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: KLSVSDPDGFDP*FVSLTARSQPA Trigger: CGCAGGCTGTGAACGAGCAGTCAGACTGACAAAGCAGGGGTCAAATCCATCTGGGTCTGACACACTCAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS GCA 72 bp | CCAGTTTTTCCATGTTTGGCAGTCACAAGGCTCATGTaGTTCACCAAGGCACTCCCAGCAGAAGAGGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: PVFPCLAVTRLM*FTKALPAEEVS Trigger: GGACACCTCTTCTGCTGGGAGTGCCTTGGTGAAGCACATGAGCCTTGTGACTGCCAAACATGGAAAAACTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS GCA 72 bp | TCTCTGGTCTCTTCATCCATGTCCAGCCCAGACTCTTaGAGTGACAACTGGATGGCCAGGAGTATGTTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SLVSSSMSSPDS*SDNWMARSMLG Trigger: TCCCAACATACTCCTGGCCATCCAGTTGTCACTGCAAGAGTCTGGGCTGGACATGGATGAAGAGACCAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS GCA 72 bp | AGGAAGCTGAGGCTCAGCACTAATTTCTGTGGTTGCTaGTGGAGGAATCAGGGCGATACTCTGCGGGTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: RKLRLSTNFCGC*WRNQGDTLRVH Trigger: ATGAACCCGCAGAGTATCGCCCTGATTCCTCCAGCAGCAACCACAGAAATTAGTGCTGAGCCTCAGCTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS GCA 72 bp | ACAAGGAAGCTGAGGCTCAGCACTAATTTCTGTGGTTaGTGCTGGAGGAATCAGGGCGATACTCTGCGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: TRKLRLSTNFCG*CWRNQGDTLRV Trigger: AACCCGCAGAGTATCGCCCTGATTCCTCCAGCAGCAACCACAGAAATTAGTGCTGAGCCTCAGCTTCCTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS CCA 72 bp | CCATGTCCAGCCCAGACTCTTGCAGTGACAACTGGATaGCCAGGAGTATGTTGGGATCATCTTCATCCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: PCPAQTLAVTTG*PGVCWDHLHPR Trigger: CCTTGGATGAAGATGATCCCAACATACTCCTGGCCATCCAGTTGTCACTGCAAGAGTCTGGGCTGGACATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS CCA 72 bp | AAGCTGAGGCTCAGCACTAATTTCTGTGGTTGCTGCTaGAGGAATCAGGGCGATACTCTGCGGGTTCATGTC | + |
|
Preference number: 6 (lower is better) Translates to: KLRLSTNFCGCC*RNQGDTLRVHV Trigger: GACATGAACCCGCAGAGTATCGCCCTGATTCCTCCAGCAGCAACCACAGAAATTAGTGCTGAGCCTCAGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS TCA 72 bp | CCTCGACGGCGCTGCTGTCTGTGTCTCCTCCGATACTaGAATTCAGCATATTCCTCAGGTGAAGCAAATCCT | + |
|
Preference number: 6 (lower is better) Translates to: PRRRCCLCLLRY*NSAYSSGEANP Trigger: AGGATTTGCTTCACCTGAGGAATATGCTGAATTTCAGTATCGGAGGAGACACAGACAGCAGCGCCGTCGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200335.2 |
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| CDS GCA 72 bp | CAGGAACTCTTGCCTTTTCTGCTGCACAAGGCATGCTaGCCTGATGATCTTGTGCCGAGGTGTACGAAGATA | + |
|
Preference number: 6 (lower is better) Translates to: QELLPFLLHKAC*PDDLVPRCTKI Trigger: TATCTTCGTACACCTCGGCACAAGATCATCAGGGCAGCATGCCTTGTGCAGCAGAAAAGGCAAGAGTTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS CCA 72 bp | TCATCCATGTCCAGCCCAGACTCTTGCAGTGACAACTaGATGGCCAGGAGTATGTTGGGATCATCTTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: SSMSSPDSCSDN*MARSMLGSSSS Trigger: GGATGAAGATGATCCCAACATACTCCTGGCCATCCAGTTGTCACTGCAAGAGTCTGGGCTGGACATGGATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS CAA 90 bp | CTTCTCAGCCTCCACTGTCATCTCCTTGGATTGCTCCTCCACATGTaGGATGACTTCATAGCGAGTGCATCTGTAGTAACCTCCAGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LLSLHCHLLGLLLHM*DDFIASASVVTSSG Trigger: TCCACTGGAGGTTACTACAGATGCACTCGCTATGAAGTCATCCAACATGTGGAGGAGCAATCCAAGGAGATGACAGTGGAGGCTGAGAAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS GCA 72 bp | CCCCTGCTTTGTCAGTCTGACTGCTCGTTCACAGCCTaGGGTAGGACACCATTTAATGGCAGGATTATTTTC | + |
|
Preference number: 6 (lower is better) Translates to: PLLCQSDCSFTA*GRTPFNGRIIF Trigger: GAAAATAATCCTGCCATTAAATGGTGTCCTACCGCAGGCTGTGAACGAGCAGTCAGACTGACAAAGCAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS TCA 72 bp | GCCACAGACAATTGGCAGCATCTTCATAGGCTTCGCTaGCTCCAACGAGTTCTTCTGGCTTCATTTCGGTTA | + |
|
Preference number: 6 (lower is better) Translates to: ATDNWQHLHRLR*LQRVLLASFRL Trigger: TAACCGAAATGAAGCCAGAAGAACTCGTTGGAGTCAGCGAAGCCTATGAAGATGCTGCCAATTGTCTGTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS TCA 72 bp | CTGTCATCTCCTTGGATTGCTCCTCCACATGTTGGATaGCTTCATAGCGAGTGCATCTGTAGTAACCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LSSPWIAPPHVG*LHSECICSNLQ Trigger: CTGGAGGTTACTACAGATGCACTCGCTATGAAGTCATCCAACATGTGGAGGAGCAATCCAAGGAGATGACAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS CCA 72 bp | TCTGGGCTCTTTCACCTTCATGAACACCAGTATCTTTaGACACTGAGTCTTCTGGTGGCACGAGTTCCATGT | + |
|
Preference number: 6 (lower is better) Translates to: SGLFHLHEHQYL*TLSLLVARVPC Trigger: ACATGGAACTCGTGCCACCAGAAGACTCAGTGTCCAAAGATACTGGTGTTCATGAAGGTGAAAGAGCCCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS CAA 72 bp | CTCCACTGTCATCTCCTTGGATTGCTCCTCCACATGTaGGATGACTTCATAGCGAGTGCATCTGTAGTAACC | + |
|
Preference number: 6 (lower is better) Translates to: LHCHLLGLLLHM*DDFIASASVVT Trigger: GGTTACTACAGATGCACTCGCTATGAAGTCATCCAACATGTGGAGGAGCAATCCAAGGAGATGACAGTGGAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS TCA 72 bp | CACTGGAAGAGGGACAGAAATCACTTCTTGTCTCACTaGGAGGGCGTGAACTCAAAGTGTCAGTTGAAAATG | + |
|
Preference number: 6 (lower is better) Translates to: HWKRDRNHFLSH*EGVNSKCQLKM Trigger: CATTTTCAACTGACACTTTGAGTTCACGCCCTCTCAGTGAGACAAGAAGTGATTTCTGTCCCTCTTCCAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS TCA 72 bp | GGAGGAATCAGGGCGATACTCTGCGGGTTCATGTCATaGAACCAAGCCATAATATTGCCAAGAAGATTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: GGIRAILCGFMS*NQAIILPRRLS Trigger: TGACAATCTTCTTGGCAATATTATGGCTTGGTTTCATGACATGAACCCGCAGAGTATCGCCCTGATTCCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS CCA 72 bp | TCAACGGCATCAATAGCCGCTCTCTCATATTCGCCTTaGTCAAGTTTTGCTCCTTTCCACTGTAAGATCATC | + |
|
Preference number: 6 (lower is better) Translates to: STASIAALSYSP*SSFAPFHCKII Trigger: GATGATCTTACAGTGGAAAGGAGCAAAACTTGACCAAGGCGAATATGAGAGAGCGGCTATTGATGCCGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS CCA 72 bp | CGTTACTACTGTCACCAGCTTGAGACAACTCTTCCCTaGCCAGAATATTCTCTTCCAGAGGATTTTCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RYYCHQLETTLP*PEYSLPEDFLP Trigger: TGGAAGAAAATCCTCTGGAAGAGAATATTCTGGCCAGGGAAGAGTTGTCTCAAGCTGGTGACAGTAGTAACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS TCA 72 bp | GCCGAGTTTTTAGAAGAACATGCACTGCATCTTCGATaGAAGTGGTATCTGGACAGCCTCCTTCAGTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: AEFLEEHALHLR*KWYLDSLLQFL Trigger: AAGAAACTGAAGGAGGCTGTCCAGATACCACTTTCATCGAAGATGCAGTGCATGTTCTTCTAAAAACTCGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS TCA 72 bp | AGAGGATTTTCTTCCATCTGGGCTCTTTCACCTTCATaGACACCAGTATCTTTGGACACTGAGTCTTCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: RGFSSIWALSPS*TPVSLDTESSG Trigger: ACCAGAAGACTCAGTGTCCAAAGATACTGGTGTTCATGAAGGTGAAAGAGCCCAGATGGAAGAAAATCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043551.11 |
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| CDS CCA 72 bp | TCCACAATAAGCATATCTTTTAACCTACGAAGATCCTaGGGCCTTAGTCCTTCATATGGCTCTCGCTTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: STISISFNLRRS*GLSPSYGSRLS Trigger: AGACAAGCGAGAGCCATATGAAGGACTAAGGCCCCAGGATCTTCGTAGGTTAAAAGATATGCTTATTGTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS TCA 72 bp | CAGCAAAAGTCATACTTGCACTTGGCACACTGCATGTaGTTACAGCCTTCGTTCTTCTGTATTGGAGACTTA | + |
|
Preference number: 6 (lower is better) Translates to: QQKSYLHLAHCM*LQPSFFCIGDL Trigger: TAAGTCTCCAATACAGAAGAACGAAGGCTGTAATCACATGCAGTGTGCCAAGTGCAAGTATGACTTTTGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS GCA 72 bp | TATGACATCTACAGGCACGAGTTGAAAGCATTCATATaGAGGGCAGAAAATGTTATGGGCTTCACCTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: YDIYRHELKAFI*RAENVMGFTFL Trigger: CAAGAAGGTGAAGCCCATAACATTTTCTGCCCTGCATATGAATGCTTTCAACTCGTGCCTGTAGATGTCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS CCA 72 bp | ATTTCGGTTATCTTTTGTAACCAGTTTTTCCATGTTTaGCAGTCACAAGGCTCATGTGCTTCACCAAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: ISVIFCNQFFHV*QSQGSCASPRH Trigger: GTGCCTTGGTGAAGCACATGAGCCTTGTGACTGCCAAACATGGAAAAACTGGTTACAAAAGATAACCGAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS CAA 90 bp | CATCTCCTTAGAAACTACACTTTCTATGACATCTACAGGCACGAGTaGAAAGCATTCATATGCAGGGCAGAAAATGTTATGGGCTTCACC | + |
|
Preference number: 6 (lower is better) Translates to: HLLRNYTFYDIYRHE*KAFICRAENVMGFT Trigger: GGTGAAGCCCATAACATTTTCTGCCCTGCATATGAATGCTTTCAACTCGTGCCTGTAGATGTCATAGAAAGTGTAGTTTCTAAGGAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS TCA 72 bp | GAAACTACACTTTCTATGACATCTACAGGCACGAGTTaGAAGCATTCATATGCAGGGCAGAAAATGTTATGG | + |
|
Preference number: 6 (lower is better) Translates to: ETTLSMTSTGTS*KHSYAGQKMLW Trigger: CCATAACATTTTCTGCCCTGCATATGAATGCTTTCAACTCGTGCCTGTAGATGTCATAGAAAGTGTAGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS GCA 72 bp | GGTCCCATACACAACAAATGCATAGATGTTTCATTGTaGACATTCCGTTTATTTGGGTTTCCATCTCTACCA | + |
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Preference number: 6 (lower is better) Translates to: GPIHNKCIDVSL*TFRLFGFPSLP Trigger: TGGTAGAGATGGAAACCCAAATAAACGGAATGTGCACAATGAAACATCTATGCATTTGTTGTGTATGGGACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS CCA 72 bp | GTGTGTTGTGCTGATAGGGTTCTCCATAAGAAATATTaGGATCAAGGGATTCTTTTAGCTGAGGATTATTTT | + |
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Preference number: 6 (lower is better) Translates to: VCCADRVLHKKY*DQGILLAEDYF Trigger: AAAATAATCCTCAGCTAAAAGAATCCCTTGATCCCAATATTTCTTATGGAGAACCCTATCAGCACAACACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS CAA 90 bp | GGATTATTTTCAACAAAGGCCTTAATATCAAACTGTAGGTATCGTTaGTCCATCTCCTTAGAAACTACACTTTCTATGACATCTACAGGC | + |
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Preference number: 6 (lower is better) Translates to: GLFSTKALISNCRYR*SISLETTLSMTSTG Trigger: GCCTGTAGATGTCATAGAAAGTGTAGTTTCTAAGGAGATGGACAAACGATACCTACAGTTTGATATTAAGGCCTTTGTTGAAAATAATCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS CAA 72 bp | TTTTCATATATTTGGCAGGCCAAATTTTCATCACCATaGATGAGTGCTTTGCGGAATTTGGTGGTTGTATTT | + |
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Preference number: 6 (lower is better) Translates to: FSYIWQAKFSSP*MSALRNLVVVF Trigger: AAATACAACCACCAAATTCCGCAAAGCACTCATCAATGGTGATGAAAATTTGGCCTGCCAAATATATGAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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| CDS CAA 72 bp | TCAACAAAGGCCTTAATATCAAACTGTAGGTATCGTTaGTCCATCTCCTTAGAAACTACACTTTCTATGACA | + |
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Preference number: 6 (lower is better) Translates to: STKALISNCRYR*SISLETTLSMT Trigger: TGTCATAGAAAGTGTAGTTTCTAAGGAGATGGACAAACGATACCTACAGTTTGATATTAAGGCCTTTGTTGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043551.11 ENSMUST00000200335.2 |
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