Pregenerated sensors for ANGPTL8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047822Ensembl transcript IDs: ENSMUST00000058777.8
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTCTCCGCTCTGCCAGGAAGCGGGGTGCACTGGCCAGGTCCAGCTaGTGGGCAGCCGGCTCTGTCAGCCCTGTTCATGGGCCTGGTGGA | + |
|
Preference number: 1 (lower is better) Translates to: CLRSARKRGALARSS*WAAGSVSPVHGPGG Trigger: TCCACCAGGCCCATGAACAGGGCTGACAGAGCCGGCTGCCCATCAGCTGGACCTGGCCAGTGCACCCCGCTTCCTGGCAGAGCGGAGACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| 3UTR CCA 90 bp | CGCCTGCTTGCTTCTGTCTCCGCTCTGCCAGGAAGCGGGGTGCACTaGCCAGGTCCAGCTGATGGGCAGCCGGCTCTGTCAGCCCTGTTC | + |
|
Preference number: 1 (lower is better) Translates to: RLLASVSALPGSGVH*PGPADGQPALSALF Trigger: GAACAGGGCTGACAGAGCCGGCTGCCCATCAGCTGGACCTGGCCAGTGCACCCCGCTTCCTGGCAGAGCGGAGACAGAAGCAAGCAGGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| 3UTR GCA 90 bp | CCCTCCTCCACAGGGCTCTGTCTTCTGCCTTCCATCCCGCCTGCTTaGTTCTGTCTCCGCTCTGCCAGGAAGCGGGGTGCACTGGCCAGG | + |
|
Preference number: 1 (lower is better) Translates to: PSSTGLCLLPSIPPA*FCLRSARKRGALAR Trigger: CCTGGCCAGTGCACCCCGCTTCCTGGCAGAGCGGAGACAGAAGCAAGCAGGCGGGATGGAAGGCAGAAGACAGAGCCCTGTGGAGGAGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| 3UTR GCA 90 bp | CCAGCCCTCCTCCACAGGGCTCTGTCTTCTGCCTTCCATCCCGCCTaGTTGCTTCTGTCTCCGCTCTGCCAGGAAGCGGGGTGCACTGGC | + |
|
Preference number: 1 (lower is better) Translates to: PALLHRALSSAFHPA*LLLSPLCQEAGCTG Trigger: GCCAGTGCACCCCGCTTCCTGGCAGAGCGGAGACAGAAGCAAGCAGGCGGGATGGAAGGCAGAAGACAGAGCCCTGTGGAGGAGGGCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| 3UTR CCA 90 bp | GGCCAGGTCCAGCTGATGGGCAGCCGGCTCTGTCAGCCCTGTTCATaGGCCTGGTGGAGCGCTTCAGTGTTCCTTGCAGCACAACTGGTC | + |
|
Preference number: 1 (lower is better) Translates to: GQVQLMGSRLCQPCS*AWWSASVFLAAQLV Trigger: GACCAGTTGTGCTGCAAGGAACACTGAAGCGCTCCACCAGGCCCATGAACAGGGCTGACAGAGCCGGCTGCCCATCAGCTGGACCTGGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| 3UTR GCA 90 bp | GGGCTCGTGTCTTTTTCCAGCCCTCCTCCACAGGGCTCTGTCTTCTaGCTTCCATCCCGCCTGCTTGCTTCTGTCTCCGCTCTGCCAGGA | + |
|
Preference number: 1 (lower is better) Translates to: GLVSFSSPPPQGSVF*LPSRLLASVSALPG Trigger: TCCTGGCAGAGCGGAGACAGAAGCAAGCAGGCGGGATGGAAGGCAGAAGACAGAGCCCTGTGGAGGAGGGCTGGAAAAAGACACGAGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| 3UTR CAA 90 bp | GCCCTCCTCCACAGGGCTCTGTCTTCTGCCTTCCATCCCGCCTGCTaGCTTCTGTCTCCGCTCTGCCAGGAAGCGGGGTGCACTGGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: ALLHRALSSAFHPAC*LLSPLCQEAGCTGQ Trigger: CTGGCCAGTGCACCCCGCTTCCTGGCAGAGCGGAGACAGAAGCAAGCAGGCGGGATGGAAGGCAGAAGACAGAGCCCTGTGGAGGAGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| 3UTR-3UTR GCA 90 bp | CTCCTCCACAGGGCTCTGTCTTCTGCCTTCCATCCCGCCTGCTTGCTTCTGTCTTGCCAGGAAGCGGGGTaGACTGGCCAGGTCCAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: LLHRALSSAFHPACLLLSCQEAG*TGQVQL Trigger: CAGCTGGACCTGGCCAGTGCACCCCGCTTCCTGGCA...AGACAGAAGCAAGCAGGCGGGATGGAAGGCAGAAGACAGAGCCCTGTGGAGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| 3UTR-3UTR GCA 90 bp | TGCTTGCTTCTGTCTCCGCTCTGCCAGGAAGCGGGGTGCACTGGCCAGGTCCAGCGCTTCAGTGTTCCTTaGAGCACAACTGGTCCTCGG | + |
|
Preference number: 2 (lower is better) Translates to: CLLLSPLCQEAGCTGQVQRFSVP*STTGPR Trigger: CCGAGGACCAGTTGTGCTGCAAGGAACACTGAAGCG...CTGGACCTGGCCAGTGCACCCCGCTTCCTGGCAGAGCGGAGACAGAAGCAAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCCGCCTGCTTGCTTCTGTCTCCGCTCTGCCAGGAAGCGGGGTGCACTGGCCATGTTCATGGGCCTGGTaGAGCGCTTCAGTGTTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: SRLLASVSALPGSGVHWPCSWAW*SASVFL Trigger: AAGGAACACTGAAGCGCTCCACCAGGCCCATGAACA...TGGCCAGTGCACCCCGCTTCCTGGCAGAGCGGAGACAGAAGCAAGCAGGCGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| 3UTR TCA 72 bp | TCTGCCAGGAAGCGGGGTGCACTGGCCAGGTCCAGCTaGTGGGCAGCCGGCTCTGTCAGCCCTGTTCATGGG | + |
|
Preference number: 3 (lower is better) Translates to: SARKRGALARSS*WAAGSVSPVHG Trigger: CCCATGAACAGGGCTGACAGAGCCGGCTGCCCATCAGCTGGACCTGGCCAGTGCACCCCGCTTCCTGGCAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| 3UTR GCA 72 bp | TGCTTGCTTCTGTCTCCGCTCTGCCAGGAAGCGGGGTaGACTGGCCAGGTCCAGCTGATGGGCAGCCGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: CLLLSPLCQEAG*TGQVQLMGSRL Trigger: GAGCCGGCTGCCCATCAGCTGGACCTGGCCAGTGCACCCCGCTTCCTGGCAGAGCGGAGACAGAAGCAAGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| 3UTR GCA 72 bp | GCCTTCCATCCCGCCTGCTTGCTTCTGTCTCCGCTCTaGCAGGAAGCGGGGTGCACTGGCCAGGTCCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: AFHPACLLLSPL*QEAGCTGQVQL Trigger: CAGCTGGACCTGGCCAGTGCACCCCGCTTCCTGGCAGAGCGGAGACAGAAGCAAGCAGGCGGGATGGAAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| 3UTR CCA 72 bp | GCTTCTGTCTCCGCTCTGCCAGGAAGCGGGGTGCACTaGCCAGGTCCAGCTGATGGGCAGCCGGCTCTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: ASVSALPGSGVH*PGPADGQPALS Trigger: TGACAGAGCCGGCTGCCCATCAGCTGGACCTGGCCAGTGCACCCCGCTTCCTGGCAGAGCGGAGACAGAAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| 3UTR GCA 72 bp | CTCCACAGGGCTCTGTCTTCTGCCTTCCATCCCGCCTaGTTGCTTCTGTCTCCGCTCTGCCAGGAAGCGGGG | + |
|
Preference number: 3 (lower is better) Translates to: LHRALSSAFHPA*LLLSPLCQEAG Trigger: CCCCGCTTCCTGGCAGAGCGGAGACAGAAGCAAGCAGGCGGGATGGAAGGCAGAAGACAGAGCCCTGTGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| 3UTR CCA 72 bp | CAGCTGATGGGCAGCCGGCTCTGTCAGCCCTGTTCATaGGCCTGGTGGAGCGCTTCAGTGTTCCTTGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: QLMGSRLCQPCS*AWWSASVFLAA Trigger: TGCTGCAAGGAACACTGAAGCGCTCCACCAGGCCCATGAACAGGGCTGACAGAGCCGGCTGCCCATCAGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| 3UTR CCA 72 bp | ATGGGCAGCCGGCTCTGTCAGCCCTGTTCATGGGCCTaGTGGAGCGCTTCAGTGTTCCTTGCAGCACAACTG | + |
|
Preference number: 3 (lower is better) Translates to: MGSRLCQPCSWA*WSASVFLAAQL Trigger: CAGTTGTGCTGCAAGGAACACTGAAGCGCTCCACCAGGCCCATGAACAGGGCTGACAGAGCCGGCTGCCCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| 3UTR GCA 72 bp | CTGTTCATGGGCCTGGTGGAGCGCTTCAGTGTTCCTTaGAGCACAACTGGTCCTCGGTGGCATCCAGGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: LFMGLVERFSVP*STTGPRWHPGS Trigger: ACTACCTGGATGCCACCGAGGACCAGTTGTGCTGCAAGGAACACTGAAGCGCTCCACCAGGCCCATGAACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| 3UTR GCA 72 bp | TCTTTTTCCAGCCCTCCTCCACAGGGCTCTGTCTTCTaGCTTCCATCCCGCCTGCTTGCTTCTGTCTCCGCT | + |
|
Preference number: 3 (lower is better) Translates to: SFSSPPPQGSVF*LPSRLLASVSA Trigger: AGCGGAGACAGAAGCAAGCAGGCGGGATGGAAGGCAGAAGACAGAGCCCTGTGGAGGAGGGCTGGAAAAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| CDS-3UTR CCA 90 bp | TCCCGCCTGCTTGCTTCTGTCTCCGCTCTGCCAGGAAGCGGGGTGCACTGGCCATCCCGCAGAGCCTGCTaGGCCCGGGCCACTTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SRLLASVSALPGSGVHWPSRRAC*ARATSP Trigger: GGGGGAAGTGGCCCGGGCCCAGCAGGCTCTGCGGGA...TGGCCAGTGCACCCCGCTTCCTGGCAGAGCGGAGACAGAAGCAAGCAGGCGGGA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| CDS-3UTR GCA 90 bp | GGTCCAGCTGATGGGCAGCCGGCTCTGTCAGCCCTGTTCATGGGCCTGGTGGAGGTGTCCCGCAGAGCCTaGTGGGCCCGGGCCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GPADGQPALSALFMGLVEVSRRA*WARATS Trigger: GGAAGTGGCCCGGGCCCAGCAGGCTCTGCGGGACAC...CTCCACCAGGCCCATGAACAGGGCTGACAGAGCCGGCTGCCCATCAGCTGGACC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| CDS-3UTR CCA 90 bp | CAGCTGATGGGCAGCCGGCTCTGTCAGCCCTGTTCATGGGCCTGGTGGAGCGCTACGCCATTGAGGGCCTaGCCTAGCTGCAGGGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: QLMGSRLCQPCSWAWWSATPLRA*PSCRAP Trigger: CGGGGCCCTGCAGCTAGGCCAGGCCCTCAATGGCGT...AGCGCTCCACCAGGCCCATGAACAGGGCTGACAGAGCCGGCTGCCCATCAGCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| CDS-3UTR GCA 90 bp | GTCCAGCTGATGGGCAGCCGGCTCTGTCAGCCCTGTTCATGGGCCTGGTGGAGCTCCCGCTGCTGTCGCTaGACGTGGCCAGTGAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VQLMGSRLCQPCSWAWWSSRCCR*TWPVRA Trigger: GGCTCTCACTGGCCACGTGCAGCGACAGCAGCGGGA...GCTCCACCAGGCCCATGAACAGGGCTGACAGAGCCGGCTGCCCATCAGCTGGAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| CDS-3UTR GCA 90 bp | CAGCTGATGGGCAGCCGGCTCTGTCAGCCCTGTTCATGGGCCTGGTGGAGCGCTGTGGCATCCTGGCCCTaGCTGACTTCTGTCCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QLMGSRLCQPCSWAWWSAVASWP*LTSVPR Trigger: CCTGGGGACAGAAGTCAGGCAGGGCCAGGATGCCAC...AGCGCTCCACCAGGCCCATGAACAGGGCTGACAGAGCCGGCTGCCCATCAGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| CDS-3UTR CCA 90 bp | CCCGCCTGCTTGCTTCTGTCTCCGCTCTGCCAGGAAGCGGGGTGCACTGGCCAGTCCTGTGTGGCATCCTaGCCCTGCCTGACTTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PACLLLSPLCQEAGCTGQSCVAS*PCLTSV Trigger: GACAGAAGTCAGGCAGGGCCAGGATGCCACACAGGA...CTGGCCAGTGCACCCCGCTTCCTGGCAGAGCGGAGACAGAAGCAAGCAGGCGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| CDS-3UTR TCA 90 bp | CCCGCCTGCTTGCTTCTGTCTCCGCTCTGCCAGGAAGCGGGGTGCACTGGCCAGGTCAGCTCTTCATATTaGGCTGGCTCTGGACCACCC | + |
|
Preference number: 4 (lower is better) Translates to: PACLLLSPLCQEAGCTGQVSSSY*AGSGPP Trigger: GGGTGGTCCAGAGCCAGCTCAATATGAAGAGCTGAC...CTGGCCAGTGCACCCCGCTTCCTGGCAGAGCGGAGACAGAAGCAAGCAGGCGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTTGCTTCTGTCTCCGCTCTGCCAGGAAGCGGGGTGCACTGGCCAGGTCCACCACTGTTGCTGCTCTaGCATCTCCCGCTGCTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LLASVSALPGSGVHWPGPPLLLL*HLPLLS Trigger: CGACAGCAGCGGGAGATGGCAGAGCAGCAACAGTGG...TGGACCTGGCCAGTGCACCCCGCTTCCTGGCAGAGCGGAGACAGAAGCAAGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| CDS-3UTR CCA 90 bp | TGGCCAGGTCCAGCTGATGGGCAGCCGGCTCTGTCAGCCCTGTTCATGGGCCTGGGGAGGGCTGCTGTGTaGAGTCTCTGCTGGATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WPGPADGQPALSALFMGLGRAAV*SLCWIC Trigger: ACAGATCCAGCAGAGACTCCACACAGCAGCCCTCCC...CAGGCCCATGAACAGGGCTGACAGAGCCGGCTGCCCATCAGCTGGACCTGGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| CDS-3UTR TCA 90 bp | TCCACAGGGCTCTGTCTTCTGCCTTCCATCCCGCCTGCTTGCTTCTGTCTCCGCGCTGCACGTGGCCAGTaGGAGCCCATAAGAGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: STGLCLLPSIPPACFCLRAARGQ*EPIRGG Trigger: GCCACCTCTTATGGGCTCTCACTGGCCACGTGCAGC...GCGGAGACAGAAGCAAGCAGGCGGGATGGAAGGCAGAAGACAGAGCCCTGTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| CDS-3UTR GCA 90 bp | GGCTCTGTCAGCCCTGTTCATGGGCCTGGTGGAGCGCTTCAGTGTTCCTTGCAGTCTGCCATCTCCCGCTaGTGTCGCTGCACGTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GSVSPVHGPGGALQCSLQSAISR*CRCTWP Trigger: TGGCCACGTGCAGCGACAGCAGCGGGAGATGGCAGA...CTGCAAGGAACACTGAAGCGCTCCACCAGGCCCATGAACAGGGCTGACAGAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| CDS-3UTR CCA 90 bp | CCAGCTGATGGGCAGCCGGCTCTGTCAGCCCTGTTCATGGGCCTGGTGGAGCGCCTCTTCATATTGAGCTaGCTCTGGACCACCCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PADGQPALSALFMGLVERLFILS*LWTTQR Trigger: CCTCTGGGTGGTCCAGAGCCAGCTCAATATGAAGAG...GCGCTCCACCAGGCCCATGAACAGGGCTGACAGAGCCGGCTGCCCATCAGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| CDS-3UTR TCA 90 bp | TCTTTTTCCAGCCCTCCTCCACAGGGCTCTGTCTTCTGCCTTCCATCCCGCCTGAGCTGCAGGGCCCCGTaGAAGAGCAGGGTCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SFSSPPPQGSVFCLPSRLSCRAP*KSRVSS Trigger: AGAGCTGACCCTGCTCTTTCACGGGGCCCTGCAGCT...CAGGCGGGATGGAAGGCAGAAGACAGAGCCCTGTGGAGGAGGGCTGGAAAAAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| CDS-3UTR GCA 90 bp | GTGCACTGGCCAGGTCCAGCTGATGGGCAGCCGGCTCTGTCAGCCCTGTTCATGCCCCAGGAATTCCAGTaGTCTGTCATAGAGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VHWPGPADGQPALSALFMPQEFQ*SVIEAQ Trigger: CTGGGCCTCTATGACAGAGCACTGGAATTCCTGGGG...CATGAACAGGGCTGACAGAGCCGGCTGCCCATCAGCTGGACCTGGCCAGTGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| CDS-3UTR GCA 90 bp | CCGGCTCTGTCAGCCCTGTTCATGGGCCTGGTGGAGCGCTTCAGTGTTCCTTGCTCTCCGACAGGCTGGTaGGAAGCTCCTGTGTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PALSALFMGLVERFSVPCSPTGW*EAPVWH Trigger: ATGCCACACAGGAGCTTCGCACCAGCCTGTCGGAGA...GCAAGGAACACTGAAGCGCTCCACCAGGCCCATGAACAGGGCTGACAGAGCCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| CDS-3UTR GCA 90 bp | CTCCACAGGGCTCTGTCTTCTGCCTTCCATCCCGCCTGCTTGCTTCTGTCTCCGTGTCGCAGCCACTGTTaGTGCTCTGCCATCTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LHRALSSAFHPACLLLSPCRSHC*CSAISR Trigger: GCGGGAGATGGCAGAGCAGCAACAGTGGCTGCGACA...CGGAGACAGAAGCAAGCAGGCGGGATGGAAGGCAGAAGACAGAGCCCTGTGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTGCTTCTGTCTCCGCTCTGCCAGGAAGCGGGGTGCACTGGCCAGGTCCAGGTGTGGAGTCTCTGCTaGATCTGTCGCAGCCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: CLLLSPLCQEAGCTGQVQVWSLC*ICRSHC Trigger: ACAGTGGCTGCGACAGATCCAGCAGAGACTCCACAC...CTGGACCTGGCCAGTGCACCCCGCTTCCTGGCAGAGCGGAGACAGAAGCAAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| CDS-3UTR CAA 90 bp | TCCCGCCTGCTTGCTTCTGTCTCCGCTCTGCCAGGAAGCGGGGTGCACTGGCCACTGTCGCAGCCACTGTaGCTGCTCTGCCATCTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: SRLLASVSALPGSGVHWPLSQPL*LLCHLP Trigger: CGGGAGATGGCAGAGCAGCAACAGTGGCTGCGACAG...TGGCCAGTGCACCCCGCTTCCTGGCAGAGCGGAGACAGAAGCAAGCAGGCGGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| CDS TCA 90 bp | GCCCAGCTTCTGTCAGGCGAGCCTCTGTGGCTCTGTACACGCCATTaGGGGCCTGGCCTAGCTGCAGGGCCCCGTGAAAGAGCAGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: AQLLSGEPLWLCTRH*GPGLAAGPRERAGS Trigger: TGACCCTGCTCTTTCACGGGGCCCTGCAGCTAGGCCAGGCCCTCAATGGCGTGTACAGAGCCACAGAGGCTCGCCTGACAGAAGCTGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| CDS CCA 90 bp | CTGCAGGGCCCCGTGAAAGAGCAGGGTCAGCTCTTCATATTGAGCTaGCTCTGGACCACCCAGAGGGGCCACTGGAGCGGGTCGCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: LQGPVKEQGQLFILS*LWTTQRGHWSGSHC Trigger: GCAGTGCGACCCGCTCCAGTGGCCCCTCTGGGTGGTCCAGAGCCAGCTCAATATGAAGAGCTGACCCTGCTCTTTCACGGGGCCCTGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| CDS-3UTR CAA 90 bp | CTGCTTGCTTCTGTCTCCGCTCTGCCAGGAAGCGGGGTGCACTGGCCAGGTCCAGCTCTGTACACGCCATaGAGGGCCTGGCCTAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LLASVSALPGSGVHWPGPALYTP*RAWPSC Trigger: GCAGCTAGGCCAGGCCCTCAATGGCGTGTACAGAGC...TGGACCTGGCCAGTGCACCCCGCTTCCTGGCAGAGCGGAGACAGAAGCAAGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| CDS GCA 90 bp | AGGGCTGCTGTGTGGAGTCTCTGCTGGATCTGTCGCAGCCACTGTTaGTGCTCTGCCATCTCCCGCTGCTGTCGCTGCACGTGGCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: RAAVWSLCWICRSHC*CSAISRCCRCTWPV Trigger: CACTGGCCACGTGCAGCGACAGCAGCGGGAGATGGCAGAGCAGCAACAGTGGCTGCGACAGATCCAGCAGAGACTCCACACAGCAGCCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| CDS GCA 90 bp | TGCTGGATCTGTCGCAGCCACTGTTGCTGCTCTGCCATCTCCCGCTaGTGTCGCTGCACGTGGCCAGTGAGAGCCCATAAGAGGTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: CWICRSHCCCSAISR*CRCTWPVRAHKRWL Trigger: GAGCCACCTCTTATGGGCTCTCACTGGCCACGTGCAGCGACAGCAGCGGGAGATGGCAGAGCAGCAACAGTGGCTGCGACAGATCCAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| CDS CCA 90 bp | GCAGAGCCTGCTGGGCCCGGGCCACTTCCCCCAGTGATCGGGCTGTaGCTTCAGCTCGAAGGTGTAAAGCGTCCTCTTCCACCTGAATCT | + |
|
Preference number: 5 (lower is better) Translates to: AEPAGPGPLPPVIGL*LQLEGVKRPLPPES Trigger: AGATTCAGGTGGAAGAGGACGCTTTACACCTTCGAGCTGAAGCCACAGCCCGATCACTGGGGGAAGTGGCCCGGGCCCAGCAGGCTCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| CDS-3UTR CAA 90 bp | CAGCTGATGGGCAGCCGGCTCTGTCAGCCCTGTTCATGGGCCTGGTGGAGCGCTGGTCAGCTCTTCATATaGAGCTGGCTCTGGACCACC | + |
|
Preference number: 5 (lower is better) Translates to: QLMGSRLCQPCSWAWWSAGQLFI*SWLWTT Trigger: GGTGGTCCAGAGCCAGCTCAATATGAAGAGCTGACC...AGCGCTCCACCAGGCCCATGAACAGGGCTGACAGAGCCGGCTGCCCATCAGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| CDS GCA 90 bp | TGTGGCATCCTGGCCCTGCCTGACTTCTGTCCCCAGGAATTCCAGTaGTCTGTCATAGAGGCCCAGGCTGTGCCCAGCTTCTGTCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: CGILALPDFCPQEFQ*SVIEAQAVPSFCQA Trigger: CGCCTGACAGAAGCTGGGCACAGCCTGGGCCTCTATGACAGAGCACTGGAATTCCTGGGGACAGAAGTCAGGCAGGGCCAGGATGCCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| CDS GCA 90 bp | TGCTGTCGCTGCACGTGGCCAGTGAGAGCCCATAAGAGGTGGCTCTaGTTATCAGCTCGAGCCTTTAAGGTCTCAAATTCTTGGTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: CCRCTWPVRAHKRWL*LSARAFKVSNSWWA Trigger: AGCCCACCAAGAATTTGAGACCTTAAAGGCTCGAGCTGATAAGCAGAGCCACCTCTTATGGGCTCTCACTGGCCACGTGCAGCGACAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| CDS TCA 72 bp | CTGTCAGGCGAGCCTCTGTGGCTCTGTACACGCCATTaGGGGCCTGGCCTAGCTGCAGGGCCCCGTGAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: LSGEPLWLCTRH*GPGLAAGPRER Trigger: TCTTTCACGGGGCCCTGCAGCTAGGCCAGGCCCTCAATGGCGTGTACAGAGCCACAGAGGCTCGCCTGACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| CDS GCA 72 bp | TGGAGTCTCTGCTGGATCTGTCGCAGCCACTGTTGCTaGTCTGCCATCTCCCGCTGCTGTCGCTGCACGTGG | + |
|
Preference number: 6 (lower is better) Translates to: WSLCWICRSHCC*SAISRCCRCTW Trigger: CCACGTGCAGCGACAGCAGCGGGAGATGGCAGAGCAGCAACAGTGGCTGCGACAGATCCAGCAGAGACTCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| CDS GCA 72 bp | GTGTGGAGTCTCTGCTGGATCTGTCGCAGCCACTGTTaGTGCTCTGCCATCTCCCGCTGCTGTCGCTGCACG | + |
|
Preference number: 6 (lower is better) Translates to: VWSLCWICRSHC*CSAISRCCRCT Trigger: CGTGCAGCGACAGCAGCGGGAGATGGCAGAGCAGCAACAGTGGCTGCGACAGATCCAGCAGAGACTCCACAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| CDS CCA 72 bp | CCCGTGAAAGAGCAGGGTCAGCTCTTCATATTGAGCTaGCTCTGGACCACCCAGAGGGGCCACTGGAGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: PVKEQGQLFILS*LWTTQRGHWSG Trigger: CCCGCTCCAGTGGCCCCTCTGGGTGGTCCAGAGCCAGCTCAATATGAAGAGCTGACCCTGCTCTTTCACGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| CDS CCA 72 bp | AAAGAGCAGGGTCAGCTCTTCATATTGAGCTGGCTCTaGACCACCCAGAGGGGCCACTGGAGCGGGTCGCAC | + |
|
Preference number: 6 (lower is better) Translates to: KEQGQLFILSWL*TTQRGHWSGSH Trigger: GTGCGACCCGCTCCAGTGGCCCCTCTGGGTGGTCCAGAGCCAGCTCAATATGAAGAGCTGACCCTGCTCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| CDS CCA 72 bp | TCCGACAGGCTGGTGCGAAGCTCCTGTGTGGCATCCTaGCCCTGCCTGACTTCTGTCCCCAGGAATTCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SDRLVRSSCVAS*PCLTSVPRNSS Trigger: ACTGGAATTCCTGGGGACAGAAGTCAGGCAGGGCCAGGATGCCACACAGGAGCTTCGCACCAGCCTGTCGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| CDS CCA 72 bp | TGTCGCTGCACGTGGCCAGTGAGAGCCCATAAGAGGTaGCTCTGCTTATCAGCTCGAGCCTTTAAGGTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: CRCTWPVRAHKR*LCLSARAFKVS Trigger: TGAGACCTTAAAGGCTCGAGCTGATAAGCAGAGCCACCTCTTATGGGCTCTCACTGGCCACGTGCAGCGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||
| CDS GCA 72 bp | TGCACGTGGCCAGTGAGAGCCCATAAGAGGTGGCTCTaGTTATCAGCTCGAGCCTTTAAGGTCTCAAATTCT | + |
|
Preference number: 6 (lower is better) Translates to: CTWPVRAHKRWL*LSARAFKVSNS Trigger: AGAATTTGAGACCTTAAAGGCTCGAGCTGATAAGCAGAGCCACCTCTTATGGGCTCTCACTGGCCACGTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058777.8 |
||