Pregenerated sensors for ALDH3B2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075296Ensembl transcript IDs: ENSMUST00000143380.3
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTTCTCTGTCTAAGCAGAAGAGCAGGAGGCTGCTGAGGATGCTGTaGTATGGAAAGGGGTATACATCTGCCTGGCTGCGGGTACATTCA | + |
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Preference number: 1 (lower is better) Translates to: ASLSKQKSRRLLRML*YGKGYTSAWLRVHS Trigger: TGAATGTACCCGCAGCCAGGCAGATGTATACCCCTTTCCATAGCACAGCATCCTCAGCAGCCTCCTGCTCTTCTGCTTAGACAGAGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| 3UTR CCA 90 bp | ATACATCTGCCTGGCTGCGGGTACATTCAGAAAACATTCCAGAAGTaGGGTATTCACAGGCTGGGCCAGACACCTGCCTTTCAAAAACCA | + |
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Preference number: 1 (lower is better) Translates to: IHLPGCGYIQKTFQK*GIHRLGQTPAFQKP Trigger: TGGTTTTTGAAAGGCAGGTGTCTGGCCCAGCCTGTGAATACCCCACTTCTGGAATGTTTTCTGAATGTACCCGCAGCCAGGCAGATGTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| 3UTR TCA 90 bp | GATCATGTCACTTCAGGTGGGACAAAGCCACCCTCTAGGTATGGATaGAGTTGTGAGCAGCTGCTCTGTCTTTTGGGATCCTGTTACGAT | + |
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Preference number: 1 (lower is better) Translates to: DHVTSGGTKPPSRYG*SCEQLLCLLGSCYD Trigger: ATCGTAACAGGATCCCAAAAGACAGAGCAGCTGCTCACAACTTCATCCATACCTAGAGGGTGGCTTTGTCCCACCTGAAGTGACATGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| 3UTR TCA 90 bp | GAAGTTGTGAGCAGCTGCTCTGTCTTTTGGGATCCTGTTACGATCTaGCAAATTAAGTCTGCCTTAGTCACCAGATCTGCCCAAACTTGG | + |
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Preference number: 1 (lower is better) Translates to: EVVSSCSVFWDPVTI*QIKSALVTRSAQTW Trigger: CCAAGTTTGGGCAGATCTGGTGACTAAGGCAGACTTAATTTGTCAGATCGTAACAGGATCCCAAAAGACAGAGCAGCTGCTCACAACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| 3UTR-3UTR CCA 90 bp | GCTGTGCTATGGAAAGGGGTATACATCTGCCTGGCTGCGGGTACATTCAGAAAAAAAGCTCAGGTAGGTTaGGGCAGGGAAGCAGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: AVLWKGVYICLAAGTFRKKAQVG*GREAGE Trigger: CTCTCCTGCTTCCCTGCCCCAACCTACCTGAGCTTT...TTTTCTGAATGTACCCGCAGCCAGGCAGATGTATACCCCTTTCCATAGCACAGC 52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| 3UTR CCA 72 bp | CTGGGGACTTGGAAGCCGCTGAAAGCTCAGGTAGGTTaGGGCAGGGAAGCAGGAGAGAGGAGTCAAGGTGGC | + |
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Preference number: 3 (lower is better) Translates to: LGTWKPLKAQVG*GREAGERSQGG Trigger: GCCACCTTGACTCCTCTCTCCTGCTTCCCTGCCCCAACCTACCTGAGCTTTCAGCGGCTTCCAAGTCCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| 3UTR GCA 72 bp | TCTAAGCAGAAGAGCAGGAGGCTGCTGAGGATGCTGTaGTATGGAAAGGGGTATACATCTGCCTGGCTGCGG | + |
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Preference number: 3 (lower is better) Translates to: SKQKSRRLLRML*YGKGYTSAWLR Trigger: CCGCAGCCAGGCAGATGTATACCCCTTTCCATAGCACAGCATCCTCAGCAGCCTCCTGCTCTTCTGCTTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| 3UTR-3UTR CAA 90 bp | TGGCTGCGGGTACATTCAGAAAACATTCCAGAAGTGGGGTATTCACAGGCTGGGGAAAGCTCAGGTAGGTaGGGGCAGGGAAGCAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: WLRVHSENIPEVGYSQAGESSGR*GQGSRR Trigger: TCTCCTGCTTCCCTGCCCCAACCTACCTGAGCTTTC...CCCAGCCTGTGAATACCCCACTTCTGGAATGTTTTCTGAATGTACCCGCAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| 3UTR CCA 72 bp | CCTGGCTGCGGGTACATTCAGAAAACATTCCAGAAGTaGGGTATTCACAGGCTGGGCCAGACACCTGCCTTT | + |
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Preference number: 3 (lower is better) Translates to: PGCGYIQKTFQK*GIHRLGQTPAF Trigger: AAAGGCAGGTGTCTGGCCCAGCCTGTGAATACCCCACTTCTGGAATGTTTTCTGAATGTACCCGCAGCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| 3UTR TCA 72 bp | GGGCTTCTCTGTCTAAGCAGAAGAGCAGGAGGCTGCTaGGGATGCTGTGCTATGGAAAGGGGTATACATCTG | + |
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Preference number: 3 (lower is better) Translates to: GLLCLSRRAGGC*GCCAMERGIHL Trigger: CAGATGTATACCCCTTTCCATAGCACAGCATCCTCAGCAGCCTCCTGCTCTTCTGCTTAGACAGAGAAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| 3UTR-3UTR CAA 90 bp | GGACAAAGCCACCCTCTAGGTATGGATGAAGTTGTGAGCAGCTGCTCTGTCTTTAAAACCACTGGGGACTaGGAAGCCGCTGAAAGCTCA | + |
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Preference number: 3 (lower is better) Translates to: GQSHPLGMDEVVSSCSVFKTTGD*EAAESS Trigger: TGAGCTTTCAGCGGCTTCCAAGTCCCCAGTGGTTTT...AAAGACAGAGCAGCTGCTCACAACTTCATCCATACCTAGAGGGTGGCTTTGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| 3UTR GCA 72 bp | GCTGAGGATGCTGTGCTATGGAAAGGGGTATACATCTaGCTGGCTGCGGGTACATTCAGAAAACATTCCAGA | + |
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Preference number: 3 (lower is better) Translates to: AEDAVLWKGVYI*LAAGTFRKHSR Trigger: TCTGGAATGTTTTCTGAATGTACCCGCAGCCAGGCAGATGTATACCCCTTTCCATAGCACAGCATCCTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| 3UTR CCA 72 bp | AGGATGCTGTGCTATGGAAAGGGGTATACATCTGCCTaGCTGCGGGTACATTCAGAAAACATTCCAGAAGTG | + |
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Preference number: 3 (lower is better) Translates to: RMLCYGKGYTSA*LRVHSENIPEV Trigger: CACTTCTGGAATGTTTTCTGAATGTACCCGCAGCCAGGCAGATGTATACCCCTTTCCATAGCACAGCATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS-3UTR TCA 90 bp | AAAACATTCCAGAAGTGGGGTATTCACAGGCTGGGCCAGACACCTGCCTTTCAAGAGGGGCCTGCCCCCTaGGAGGGCTCCGAGCCTGTC | + |
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Preference number: 4 (lower is better) Translates to: KTFQKWGIHRLGQTPAFQEGPAP*EGSEPV Trigger: GACAGGCTCGGAGCCCTCTCAGGGGGCAGGCCCCTC...TTGAAAGGCAGGTGTCTGGCCCAGCCTGTGAATACCCCACTTCTGGAATGTTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS-3UTR GCA 90 bp | GCTGTGCTATGGAAAGGGGTATACATCTGCCTGGCTGCGGGTACATTCAGAAAAGGCCTCAGAGGGGCCTaGCCCCTGAGAGGGCTCCGA | + |
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Preference number: 4 (lower is better) Translates to: AVLWKGVYICLAAGTFRKGLRGA*PLRGLR Trigger: TCGGAGCCCTCTCAGGGGGCAGGCCCCTCTGAGGCC...TTTTCTGAATGTACCCGCAGCCAGGCAGATGTATACCCCTTTCCATAGCACAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS-3UTR GCA 90 bp | ATCATGTCACTTCAGGTGGGACAAAGCCACCCTCTAGGTATGGATGAAGTTGTGGCCTCCCGCAGGCTGTaGAGTGTGGCCTCAGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: IMSLQVGQSHPLGMDEVVASRRL*SVASEG Trigger: CCCCTCTGAGGCCACACTGCACAGCCTGCGGGAGGC...CACAACTTCATCCATACCTAGAGGGTGGCTTTGTCCCACCTGAAGTGACATGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS-3UTR GCA 90 bp | GGACAAAGCCACCCTCTAGGTATGGATGAAGTTGTGAGCAGCTGCTCTGTCTTTAGGCCGAGTCCGCCCTaGATTGAAGGCCTCCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: GQSHPLGMDEVVSSCSVFRPSPP*IEGLPQ Trigger: CTGCGGGAGGCCTTCAATGCAGGGCGGACTCGGCCT...AAAGACAGAGCAGCTGCTCACAACTTCATCCATACCTAGAGGGTGGCTTTGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS-3UTR CCA 90 bp | GAGCAGGAGGCTGCTGAGGATGCTGTGCTATGGAAAGGGGTATACATCTGCCTGAAGGAGAACTTGCCATaGTACCTGCCCATCCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: EQEAAEDAVLWKGVYICLKENLP*YLPIPL Trigger: CAGCGGGATGGGCAGGTACCATGGCAAGTTCTCCTT...CAGGCAGATGTATACCCCTTTCCATAGCACAGCATCCTCAGCAGCCTCCTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS-3UTR GCA 90 bp | GGTACATTCAGAAAACATTCCAGAAGTGGGGTATTCACAGGCTGGGCCAGACACTTTCCATCCCAGGGCTaGGCAGCAGGCAGGCACGAT | + |
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Preference number: 4 (lower is better) Translates to: GTFRKHSRSGVFTGWARHFPSQG*AAGRHD Trigger: ATCGTGCCTGCCTGCTGCGCAGCCCTGGGATGGAAA...GTGTCTGGCCCAGCCTGTGAATACCCCACTTCTGGAATGTTTTCTGAATGTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS-3UTR TCA 90 bp | GGTACATTCAGAAAACATTCCAGAAGTGGGGTATTCACAGGCTGGGCCAGACACAGGGCTCTTTCCGGATaGAGGCTGAGCTCAGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: GTFRKHSRSGVFTGWARHRALSG*RLSSAW Trigger: CCAAGCTGAGCTCAGCCTTCATCCGGAAAGAGCCCT...GTGTCTGGCCCAGCCTGTGAATACCCCACTTCTGGAATGTTTTCTGAATGTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS-3UTR GCA 90 bp | GTCTGCCTTAGTCACCAGATCTGCCCAAACTTGGTGAGGGGGCTTCTCTGTCTAAGCCACCGCTGCTGGTaGGTTCCAACATCTGATTCA | + |
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Preference number: 4 (lower is better) Translates to: VCLSHQICPNLVRGLLCLSHRCW*VPTSDS Trigger: TGAATCAGATGTTGGAACGCACCAGCAGCGGTGGCT...TAGACAGAGAAGCCCCCTCACCAAGTTTGGGCAGATCTGGTGACTAAGGCAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS-3UTR CCA 90 bp | CATTCAGAAAACATTCCAGAAGTGGGGTATTCACAGGCTGGGCCAGACACCTGCACAGCAAAGCAGCTCTaGTCCAGATACTGGGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: HSENIPEVGYSQAGPDTCTAKQL*SRYWGS Trigger: GCTGCCCCAGTATCTGGACCAGAGCTGCTTTGCTGT...GCAGGTGTCTGGCCCAGCCTGTGAATACCCCACTTCTGGAATGTTTTCTGAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS-3UTR CCA 90 bp | GGATGCTGTGCTATGGAAAGGGGTATACATCTGCCTGGCTGCGGGTACATTCAGAGCTCCGGGAGCCTATaGCCCAGCTTATCAGTTGTT | + |
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Preference number: 4 (lower is better) Translates to: GCCAMERGIHLPGCGYIQSSGSL*PSLSVV Trigger: AACAACTGATAAGCTGGGCCATAGGCTCCCGGAGCT...CTGAATGTACCCGCAGCCAGGCAGATGTATACCCCTTTCCATAGCACAGCATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS-3UTR GCA 90 bp | GTCATGATCATGTCACTTCAGGTGGGACAAAGCCACCCTCTAGGTATGGATGAACTGGGGCAGCAGCTCTaGCAGCACCTTCTCTGTGTT | + |
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Preference number: 4 (lower is better) Translates to: VMIMSLQVGQSHPLGMDELGQQL*QHLLCV Trigger: AACACAGAGAAGGTGCTGGCAGAGCTGCTGCCCCAG...TTCATCCATACCTAGAGGGTGGCTTTGTCCCACCTGAAGTGACATGATCATGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS-3UTR GCA 90 bp | CATTCAGAAAACATTCCAGAAGTGGGGTATTCACAGGCTGGGCCAGACACCTGCCACGTCCTTAGCCAGTaGATCTTGCAGCAGCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: HSENIPEVGYSQAGPDTCHVLSQ*ILQQLF Trigger: AAAGAGCTGCTGCAAGATGCACTGGCTAAGGACGTG...GCAGGTGTCTGGCCCAGCCTGTGAATACCCCACTTCTGGAATGTTTTCTGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS-3UTR GCA 90 bp | GTCATGATCATGTCACTTCAGGTGGGACAAAGCCACCCTCTAGGTATGGATGAACTCCAAAGCCACCGCTaGTGGTGCGTTCCAACATCT | + |
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Preference number: 4 (lower is better) Translates to: VMIMSLQVGQSHPLGMDELQSHR*WCVPTS Trigger: AGATGTTGGAACGCACCAGCAGCGGTGGCTTTGGAG...TTCATCCATACCTAGAGGGTGGCTTTGTCCCACCTGAAGTGACATGATCATGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS-3UTR GCA 90 bp | GTCATGATCATGTCACTTCAGGTGGGACAAAGCCACCCTCTAGGTATGGATGAAACTTGCCATGGTACCTaGCCATCCCGCTGTTGCCAA | + |
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Preference number: 4 (lower is better) Translates to: VMIMSLQVGQSHPLGMDETCHGT*PSRCCQ Trigger: TTGGCAACAGCGGGATGGGCAGGTACCATGGCAAGT...TTCATCCATACCTAGAGGGTGGCTTTGTCCCACCTGAAGTGACATGATCATGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS-3UTR TCA 90 bp | ATCATGTCACTTCAGGTGGGACAAAGCCACCCTCTAGGTATGGATGAAGTTGTGCTCCATAGAAACGCGTaGTGGAATTCTGCAGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: IMSLQVGQSHPLGMDEVVLHRNA*WNSAGQ Trigger: CTGCCCTGCAGAATTCCATCACGCGTTTCTATGGAG...CACAACTTCATCCATACCTAGAGGGTGGCTTTGTCCCACCTGAAGTGACATGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS-3UTR GCA 90 bp | GGTACATTCAGAAAACATTCCAGAAGTGGGGTATTCACAGGCTGGGCCAGACACAGCTCTTTGTTTTCCTaGAAGAAGCGACCCAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: GTFRKHSRSGVFTGWARHSSLFS*KKRPRL Trigger: GAGCCTGGGTCGCTTCTTGCAGGAAAACAAAGAGCT...GTGTCTGGCCCAGCCTGTGAATACCCCACTTCTGGAATGTTTTCTGAATGTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS-3UTR GCA 90 bp | GGACAAAGCCACCCTCTAGGTATGGATGAAGTTGTGAGCAGCTGCTCTGTCTTTTGTCAAAGGAGAACTTaGCATGGTACCTGCCCATCC | + |
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Preference number: 4 (lower is better) Translates to: GQSHPLGMDEVVSSCSVFCQRRT*HGTCPS Trigger: GGATGGGCAGGTACCATGGCAAGTTCTCCTTTGACA...AAAGACAGAGCAGCTGCTCACAACTTCATCCATACCTAGAGGGTGGCTTTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS-3UTR GCA 90 bp | GCTGTGCTATGGAAAGGGGTATACATCTGCCTGGCTGCGGGTACATTCAGAAAAAGGATAATTCCAGGGTaGAATGATAAGCACCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: AVLWKGVYICLAAGTFRKRIIPG*NDKHQA Trigger: GGCCTGGTGCTTATCATTGCACCCTGGAATTATCCT...TTTTCTGAATGTACCCGCAGCCAGGCAGATGTATACCCCTTTCCATAGCACAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS-3UTR GCA 90 bp | GGATGCTGTGCTATGGAAAGGGGTATACATCTGCCTGGCTGCGGGTACATTCAGTGGAGCCTCTTGAAATaGTTCTGGTTGATGATTCTG | + |
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Preference number: 4 (lower is better) Translates to: GCCAMERGIHLPGCGYIQWSLLK*FWLMIL Trigger: CAGAATCATCAACCAGAAGCATTTCAAGAGGCTCCA...CTGAATGTACCCGCAGCCAGGCAGATGTATACCCCTTTCCATAGCACAGCATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS GCA 90 bp | CAGCTCTTTGTTTTCCTGCAAGAAGCGACCCAGGCTCCGCAGCTGTaGAGTCCGAAACTCAGTAGGCCGAGTCCGCCCTGCATTGAAGGC | + |
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Preference number: 5 (lower is better) Translates to: QLFVFLQEATQAPQL*SPKLSRPSPPCIEG Trigger: GCCTTCAATGCAGGGCGGACTCGGCCTACTGAGTTTCGGACTGCACAGCTGCGGAGCCTGGGTCGCTTCTTGCAGGAAAACAAAGAGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS-3UTR CAA 90 bp | GGTACATTCAGAAAACATTCCAGAAGTGGGGTATTCACAGGCTGGGCCAGACACCGAGTCCGCCCTGCATaGAAGGCCTCCCGCAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: GTFRKHSRSGVFTGWARHRVRPA*KASRRL Trigger: CAGCCTGCGGGAGGCCTTCAATGCAGGGCGGACTCG...GTGTCTGGCCCAGCCTGTGAATACCCCACTTCTGGAATGTTTTCTGAATGTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS GCA 90 bp | CCCACGTCCTTAGCCAGTGCATCTTGCAGCAGCTCTTTGTTTTCCTaGAAGAAGCGACCCAGGCTCCGCAGCTGTGCAGTCCGAAACTCA | + |
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Preference number: 5 (lower is better) Translates to: PTSLASASCSSSLFS*KKRPRLRSCAVRNS Trigger: TGAGTTTCGGACTGCACAGCTGCGGAGCCTGGGTCGCTTCTTGCAGGAAAACAAAGAGCTGCTGCAAGATGCACTGGCTAAGGACGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS GCA 90 bp | GTAGGGTCAGGTAGAGGAAGCCATCGTTGCCTCCAAAGCCACCGCTaGTGGTGCGTTCCAACATCTGATTCACCACCTGGTTGTTGTTGG | + |
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Preference number: 5 (lower is better) Translates to: VGSGRGSHRCLQSHR*WCVPTSDSPPGCCW Trigger: CCAACAACAACCAGGTGGTGAATCAGATGTTGGAACGCACCAGCAGCGGTGGCTTTGGAGGCAACGATGGCTTCCTCTACCTGACCCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS CCA 90 bp | GGGTCAGGTAGAGGAAGCCATCGTTGCCTCCAAAGCCACCGCTGCTaGTGCGTTCCAACATCTGATTCACCACCTGGTTGTTGTTGGAGA | + |
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Preference number: 5 (lower is better) Translates to: GSGRGSHRCLQSHRC*CVPTSDSPPGCCWR Trigger: TCTCCAACAACAACCAGGTGGTGAATCAGATGTTGGAACGCACCAGCAGCGGTGGCTTTGGAGGCAACGATGGCTTCCTCTACCTGACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS-3UTR CAA 90 bp | GGTACATTCAGAAAACATTCCAGAAGTGGGGTATTCACAGGCTGGGCCAGACACGGCTTCTCCCGCCGGTaGATGAACTCAATGGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: GTFRKHSRSGVFTGWARHGFSRR*MNSMAS Trigger: TGAAGCCATTGAGTTCATCAACCGGCGGGAGAAGCC...GTGTCTGGCCCAGCCTGTGAATACCCCACTTCTGGAATGTTTTCTGAATGTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS-3UTR CAA 90 bp | CATTCAGAAAACATTCCAGAAGTGGGGTATTCACAGGCTGGGCCAGACACCTGCGTGTCAAAGGAGAACTaGCCATGGTACCTGCCCATC | + |
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Preference number: 5 (lower is better) Translates to: HSENIPEVGYSQAGPDTCVSKEN*PWYLPI Trigger: GATGGGCAGGTACCATGGCAAGTTCTCCTTTGACAC...GCAGGTGTCTGGCCCAGCCTGTGAATACCCCACTTCTGGAATGTTTTCTGAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS-3UTR CAA 90 bp | GGATGCTGTGCTATGGAAAGGGGTATACATCTGCCTGGCTGCGGGTACATTCAGTCTTGCAGCAGCTCTTaGTTTTCCTGCAAGAAGCGA | + |
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Preference number: 5 (lower is better) Translates to: GCCAMERGIHLPGCGYIQSCSSS*FSCKKR Trigger: TCGCTTCTTGCAGGAAAACAAAGAGCTGCTGCAAGA...CTGAATGTACCCGCAGCCAGGCAGATGTATACCCCTTTCCATAGCACAGCATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS-3UTR CAA 90 bp | ACATTCAGAAAACATTCCAGAAGTGGGGTATTCACAGGCTGGGCCAGACACCTGGGCCCAGCTTATCAGTaGTTGGTTCCAGGGACCATA | + |
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Preference number: 5 (lower is better) Translates to: TFRKHSRSGVFTGWARHLGPAYQ*LVPGTI Trigger: TATGGTCCCTGGAACCAACAACTGATAAGCTGGGCC...CAGGTGTCTGGCCCAGCCTGTGAATACCCCACTTCTGGAATGTTTTCTGAATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS-3UTR CAA 90 bp | TGGAAAGGGGTATACATCTGCCTGGCTGCGGGTACATTCAGAAAACATTCCAGACCAGCTTATCAGTTGTaGGTTCCAGGGACCATAAGG | + |
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Preference number: 5 (lower is better) Translates to: WKGVYICLAAGTFRKHSRPAYQL*VPGTIR Trigger: CCTTATGGTCCCTGGAACCAACAACTGATAAGCTGG...TCTGGAATGTTTTCTGAATGTACCCGCAGCCAGGCAGATGTATACCCCTTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS GCA 72 bp | CTCCCGCAGGCTGTGCAGTGTGGCCTCAGAGGGGCCTaGCCCCTGAGAGGGCTCCGAGCCTGTCTCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: LPQAVQCGLRGA*PLRGLRACLCS Trigger: GCTGCAGAGACAGGCTCGGAGCCCTCTCAGGGGGCAGGCCCCTCTGAGGCCACACTGCACAGCCTGCGGGAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS CAA 90 bp | CGCAGCTGTGCAGTCCGAAACTCAGTAGGCCGAGTCCGCCCTGCATaGAAGGCCTCCCGCAGGCTGTGCAGTGTGGCCTCAGAGGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: RSCAVRNSVGRVRPA*KASRRLCSVASEGP Trigger: AGGCCCCTCTGAGGCCACACTGCACAGCCTGCGGGAGGCCTTCAATGCAGGGCGGACTCGGCCTACTGAGTTTCGGACTGCACAGCTGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS CAA 72 bp | GCAGTCCGAAACTCAGTAGGCCGAGTCCGCCCTGCATaGAAGGCCTCCCGCAGGCTGTGCAGTGTGGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: AVRNSVGRVRPA*KASRRLCSVAS Trigger: TGAGGCCACACTGCACAGCCTGCGGGAGGCCTTCAATGCAGGGCGGACTCGGCCTACTGAGTTTCGGACTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS CCA 72 bp | TCACGGGCTCTGTCTCCTGCACGTCTACCAGCACTGTaGGGGCAATGTAGCGCTCTCCCTCATCACTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: SRALSPARLPAL*GQCSALPHHSG Trigger: GCCAGAGTGATGAGGGAGAGCGCTACATTGCCCCCACAGTGCTGGTAGACGTGCAGGAGACAGAGCCCGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS CAA 90 bp | CCTGACTTGCCCACGTCCTTAGCCAGTGCATCTTGCAGCAGCTCTTaGTTTTCCTGCAAGAAGCGACCCAGGCTCCGCAGCTGTGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: PDLPTSLASASCSSS*FSCKKRPRLRSCAV Trigger: GACTGCACAGCTGCGGAGCCTGGGTCGCTTCTTGCAGGAAAACAAAGAGCTGCTGCAAGATGCACTGGCTAAGGACGTGGGCAAGTCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS CAA 72 bp | CCCACGTCCTTAGCCAGTGCATCTTGCAGCAGCTCTTaGTTTTCCTGCAAGAAGCGACCCAGGCTCCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: PTSLASASCSSS*FSCKKRPRLRS Trigger: GCTGCGGAGCCTGGGTCGCTTCTTGCAGGAAAACAAAGAGCTGCTGCAAGATGCACTGGCTAAGGACGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS CAA 90 bp | CAGGAGGGTGCAGCTCCGGGAGCCTATGGCCCAGCTTATCAGTTGTaGGTTCCAGGGACCATAAGGCGGGTAACGGAGGTCATTAAGCTT | + |
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Preference number: 6 (lower is better) Translates to: QEGAAPGAYGPAYQL*VPGTIRRVTEVIKL Trigger: AAGCTTAATGACCTCCGTTACCCGCCTTATGGTCCCTGGAACCAACAACTGATAAGCTGGGCCATAGGCTCCCGGAGCTGCACCCTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS CAA 90 bp | TCACAGGAGGGTGCAGCTCCGGGAGCCTATGGCCCAGCTTATCAGTaGTTGGTTCCAGGGACCATAAGGCGGGTAACGGAGGTCATTAAG | + |
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Preference number: 6 (lower is better) Translates to: SQEGAAPGAYGPAYQ*LVPGTIRRVTEVIK Trigger: CTTAATGACCTCCGTTACCCGCCTTATGGTCCCTGGAACCAACAACTGATAAGCTGGGCCATAGGCTCCCGGAGCTGCACCCTCCTGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS GCA 72 bp | GGTAGAGGAAGCCATCGTTGCCTCCAAAGCCACCGCTaGTGGTGCGTTCCAACATCTGATTCACCACCTGGT | + |
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Preference number: 6 (lower is better) Translates to: GRGSHRCLQSHR*WCVPTSDSPPG Trigger: ACCAGGTGGTGAATCAGATGTTGGAACGCACCAGCAGCGGTGGCTTTGGAGGCAACGATGGCTTCCTCTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS CAA 72 bp | TTCCGGATGAAGGCTGAGCTCAGCTTGGTGAGCAAGTaGGTGGACACAGGCTCGTCCTTCATCCAGGTCTGC | + |
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Preference number: 6 (lower is better) Translates to: FRMKAELSLVSK*VDTGSSFIQVC Trigger: GCAGACCTGGATGAAGGACGAGCCTGTGTCCACCAACTTGCTCACCAAGCTGAGCTCAGCCTTCATCCGGAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS CAA 72 bp | CCAAAGGGCTCTTTCCGGATGAAGGCTGAGCTCAGCTaGGTGAGCAAGTTGGTGGACACAGGCTCGTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: PKGSFRMKAELS*VSKLVDTGSSF Trigger: GAAGGACGAGCCTGTGTCCACCAACTTGCTCACCAAGCTGAGCTCAGCCTTCATCCGGAAAGAGCCCTTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS GCA 72 bp | TTAGCCAGTGCATCTTGCAGCAGCTCTTTGTTTTCCTaGAAGAAGCGACCCAGGCTCCGCAGCTGTGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: LASASCSSSLFS*KKRPRLRSCAV Trigger: GACTGCACAGCTGCGGAGCCTGGGTCGCTTCTTGCAGGAAAACAAAGAGCTGCTGCAAGATGCACTGGCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS CCA 72 bp | TGCGTTCCAACATCTGATTCACCACCTGGTTGTTGTTaGAGAAGGCATACAGCGCCAGAGGCTTCTCCCGCC | + |
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Preference number: 6 (lower is better) Translates to: CVPTSDSPPGCC*RRHTAPEASPA Trigger: GGCGGGAGAAGCCTCTGGCGCTGTATGCCTTCTCCAACAACAACCAGGTGGTGAATCAGATGTTGGAACGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS CCA 72 bp | AGAGGAAGCCATCGTTGCCTCCAAAGCCACCGCTGCTaGTGCGTTCCAACATCTGATTCACCACCTGGTTGT | + |
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Preference number: 6 (lower is better) Translates to: RGSHRCLQSHRC*CVPTSDSPPGC Trigger: ACAACCAGGTGGTGAATCAGATGTTGGAACGCACCAGCAGCGGTGGCTTTGGAGGCAACGATGGCTTCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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| CDS CAA 72 bp | GAGAAGGCATACAGCGCCAGAGGCTTCTCCCGCCGGTaGATGAACTCAATGGCTTCATCCAGGCTTCTCACA | + |
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Preference number: 6 (lower is better) Translates to: EKAYSARGFSRR*MNSMASSRLLT Trigger: TGTGAGAAGCCTGGATGAAGCCATTGAGTTCATCAACCGGCGGGAGAAGCCTCTGGCGCTGTATGCCTTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143380.3 |
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