RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AKAP9 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000040407

Ensembl transcript IDs: ENSMUST00000044492.10, ENSMUST00000133952.2, ENSMUST00000143365.8, ENSMUST00000147629.2, ENSMUST00000176863.2, ENSMUST00000238634.2

Found 640 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGAATGTTCTTTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTaGGCTGAGACAAGTAACAAGATGATAGGGACCACGAGTTGTGGC +
Preference number: 1 (lower is better)
Translates to: RMFFNEGRAKPHFGS*AETSNKMIGTTSCG
Trigger: GCCACAACTCGTGGTCCCTATCATCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAAAGAACATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
3UTR TCA 90 bp AGCACCTTTGGTTCTCATTTATCTCCATGTCTCAAAGGCAGAGGATaGTCTGCTGAAATTCTTATCTCATGCGCAGCTTCCATCTTAGTC +
Preference number: 1 (lower is better)
Translates to: STFGSHLSPCLKGRG*SAEILISCAASILV
Trigger: GACTAAGATGGAAGCTGCGCATGAGATAAGAATTTCAGCAGATCATCCTCTGCCTTTGAGACATGGAGATAAATGAGAACCAAAGGTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133952.2
3UTR CCA 90 bp CAAAGTTATGACAATGTAAGTAAAATTCCAACAGTAAAGCACCTTTaGTTCTCATTTATCTCCATGTCTCAAAGGCAGAGGATGATCTGC +
Preference number: 1 (lower is better)
Translates to: QSYDNVSKIPTVKHL*FSFISMSQRQRMIC
Trigger: GCAGATCATCCTCTGCCTTTGAGACATGGAGATAAATGAGAACCAAAGGTGCTTTACTGTTGGAATTTTACTTACATTGTCATAACTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133952.2
3UTR TCA 90 bp AATTTGGGAAATAAAATTAGAAATTCCCAGCAATGCACAGCTTTGTaGTTGTCTTCATGTAGTGCAGAGACCATTAATAGTGAAACACTC +
Preference number: 1 (lower is better)
Translates to: NLGNKIRNSQQCTAL*LSSCSAETINSETL
Trigger: GAGTGTTTCACTATTAATGGTCTCTGCACTACATGAAGACAATCACAAAGCTGTGCATTGCTGGGAATTTCTAATTTTATTTCCCAAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
3UTR CCA 90 bp TTTGTAAGTCTCTTTGGACATAAGAACACGAAATGTAATAAAACATaGACTAATCATAAACACCAGTGCCACCTTAGTGTTGAAAACAGG +
Preference number: 1 (lower is better)
Translates to: FVSLFGHKNTKCNKT*TNHKHQCHLSVENR
Trigger: CCTGTTTTCAACACTAAGGTGGCACTGGTGTTTATGATTAGTCCATGTTTTATTACATTTCGTGTTCTTATGTCCAAAGAGACTTACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
3UTR-3UTR TCA 90 bp TGTCAGGGCCCAGATTCCGAAGCAAGGCATCGTTTCGTAGTTCAGCTTTTAGCTCCTTTTCTGAAGCAATaGTGGCTTCGATGTCAGCTG +
Preference number: 2 (lower is better)
Translates to: CQGPDSEARHRFVVQLLAPFLKQ*WLRCQL
Trigger: CAGCTGACATCGAAGCCATCATTGCTTCAGAAAAGG...AGCTAAAAGCTGAACTACGAAACGATGCCTTGCTTCGGAATCTGGGCCCTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147629.2
3UTR-3UTR GCA 90 bp TGTCAGGGCCCAGATTCCGAAGCAAGGCATCGTTTCGTAGTTCAGCTTTTAGCTGTACACTTTTGCTTCTaGCCTCTTCAAGGCTTTCTG +
Preference number: 2 (lower is better)
Translates to: CQGPDSEARHRFVVQLLAVHFCF*PLQGFL
Trigger: CAGAAAGCCTTGAAGAGGGCAGAAGCAAAAGTGTAC...AGCTAAAAGCTGAACTACGAAACGATGCCTTGCTTCGGAATCTGGGCCCTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147629.2
3UTR-3UTR TCA 90 bp TGTCAGGGCCCAGATTCCGAAGCAAGGCATCGTTTCGTAGTTCAGCTTTTAGCTCTCTTCAAGGCTTTCTaGAGAGATAACTTTTCTCTG +
Preference number: 2 (lower is better)
Translates to: CQGPDSEARHRFVVQLLALFKAF*RDNFSL
Trigger: CAGAGAAAAGTTATCTCTTCAGAAAGCCTTGAAGAG...AGCTAAAAGCTGAACTACGAAACGATGCCTTGCTTCGGAATCTGGGCCCTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147629.2
3UTR-3UTR CCA 90 bp GGAAACTTGAAGCTCTCAAGTATTTATTATAAATTTTCTGCAGGGCAGCATGATAGCCACAGGAAGAACTaGGGGGTCCTAAGCTGTGCT +
Preference number: 2 (lower is better)
Translates to: GNLKLSSIYYKFSAGQHDSHRKN*GVLSCA
Trigger: AGCACAGCTTAGGACCCCCCAGTTCTTCCTGTGGCT...ATCATGCTGCCCTGCAGAAAATTTATAATAAATACTTGAGAGCTTCAAGTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000147629.2
3UTR-3UTR CCA 90 bp GGAAACTTGAAGCTCTCAAGTATTTATTATAAATTTTCTGCAGGGCAGCATGATAACAACAGTCTCTGCTaGCTCCTGTGTGCCAGTAGC +
Preference number: 2 (lower is better)
Translates to: GNLKLSSIYYKFSAGQHDNNSLC*LLCASS
Trigger: GCTACTGGCACACAGGAGCCAGCAGAGACTGTTGTT...ATCATGCTGCCCTGCAGAAAATTTATAATAAATACTTGAGAGCTTCAAGTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147629.2
3UTR-3UTR TCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACATAGGTCTCTACAAGTaGTATGTTGTCTTCATCACC +
Preference number: 2 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYIGLYK*YVVFIT
Trigger: GGTGATGAAGACAACATATCACTTGTAGAGACCTAT...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
3UTR-3UTR TCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACAATGATTACTGTGCATaGACACACACACATTGCTTA +
Preference number: 2 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYNDYCA*THTHCL
Trigger: TAAGCAATGTGTGTGTGTTCATGCACAGTAATCATT...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
3UTR CAA 90 bp GTAATAAAACATGGACTAATCATAAACACCAGTGCCACCTTAGTGTaGAAAACAGGCACATTAAGAATGTTCTTTAATGAAGGCAGAGCA +
Preference number: 2 (lower is better)
Translates to: VIKHGLIINTSATLV*KTGTLRMFFNEGRA
Trigger: TGCTCTGCCTTCATTAAAGAACATTCTTAATGTGCCTGTTTTCAACACTAAGGTGGCACTGGTGTTTATGATTAGTCCATGTTTTATTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
3UTR-3UTR GCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTTACAATCATAAGCTGTaGATGTATTGGTCCCATCGA +
Preference number: 2 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSYNHKL*MYWSHR
Trigger: TCGATGGGACCAATACATGCACAGCTTATGATTGTA...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
3UTR-3UTR CCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTAAGCTGTGCATGTATTaGTCCCATCGAATATTCACA +
Preference number: 2 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSKLCMY*SHRIFT
Trigger: TGTGAATATTCGATGGGACCAATACATGCACAGCTT...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
3UTR CCA 72 bp TCATTAGGCTTTCAGTTAAGGAGCCACAGGAAGAACTaGGGGGTCCTAAGCTGTGCTCATCACCTGGCTGGC +
Preference number: 3 (lower is better)
Translates to: SLGFQLRSHRKN*GVLSCAHHLAG
Trigger: GCCAGCCAGGTGATGAGCACAGCTTAGGACCCCCCAGTTCTTCCTGTGGCTCCTTAACTGAAAGCCTAATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000147629.2
3UTR TCA 72 bp TGTGCCAGTAGCACCTGTTCAGCTCCTCCAGCTTTATaGCAATGCTCCGTAAGGTGTTCTTTTCTTCTGTTA +
Preference number: 3 (lower is better)
Translates to: CASSTCSAPPAL*QCSVRCSFLLL
Trigger: TAACAGAAGAAAAGAACACCTTACGGAGCATTGTCATAAAGCTGGAGGAGCTGAACAGGTGCTACTGGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147629.2
3UTR TCA 72 bp TTTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTaGGCTGAGACAAGTAACAAGATGATAGGGACCACG +
Preference number: 3 (lower is better)
Translates to: FNEGRAKPHFGS*AETSNKMIGTT
Trigger: CGTGGTCCCTATCATCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
3UTR-3UTR CAA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGTCTACAAGTGATATGTaGTCTTCATCACCAGTAGCA +
Preference number: 3 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLSTSDM*SSSPVA
Trigger: TGCTACTGGTGATGAAGACAACATATCACTTGTAGA...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
3UTR-3UTR CAA 90 bp ATTTATTATAAATTTTCTGCAGGGCAGCATGATCAGTGTCAGGGCCCAGATTCCTTAGCTTGTACACTTTaGCTTCTGCCCTCTTCAAGG +
Preference number: 3 (lower is better)
Translates to: IYYKFSAGQHDQCQGPDSLACTL*LLPSSR
Trigger: CCTTGAAGAGGGCAGAAGCAAAAGTGTACAAGCTAA...GGAATCTGGGCCCTGACACTGATCATGCTGCCCTGCAGAAAATTTATAATAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147629.2
3UTR-3UTR CAA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGGGATACAATTTAATATaGAGAGCTGATTTCTGCGTC +
Preference number: 3 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLGYNLI*RADFCV
Trigger: GACGCAGAAATCAGCTCTCAATATTAAATTGTATCC...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
3UTR CCA 72 bp GTTCTAGACTTTGATCAAGTCCCTCCTTTTACTGTGTaGTTGTTAAGACTTTTAAGTCATAGACGTGTTAGG +
Preference number: 3 (lower is better)
Translates to: VLDFDQVPPFTV*LLRLLSHRRVR
Trigger: CCTAACACGTCTATGACTTAAAAGTCTTAACAACCACACAGTAAAAGGAGGGACTTGATCAAAGTCTAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
3UTR CCA 72 bp GACAATGTAAGTAAAATTCCAACAGTAAAGCACCTTTaGTTCTCATTTATCTCCATGTCTCAAAGGCAGAGG +
Preference number: 3 (lower is better)
Translates to: DNVSKIPTVKHL*FSFISMSQRQR
Trigger: CCTCTGCCTTTGAGACATGGAGATAAATGAGAACCAAAGGTGCTTTACTGTTGGAATTTTACTTACATTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133952.2
3UTR CCA 72 bp ACAATGCTCCGTAAGGTGTTCTTTTCTTCTGTTAGTTaGTTGATAAGTCTTGTTAACTCAGTATTTTGTCTC +
Preference number: 3 (lower is better)
Translates to: TMLRKVFFSSVS*LISLVNSVFCL
Trigger: GAGACAAAATACTGAGTTAACAAGACTTATCAACCAACTAACAGAAGAAAAGAACACCTTACGGAGCATTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147629.2
3UTR TCA 72 bp AATAAAATTAGAAATTCCCAGCAATGCACAGCTTTGTaGTTGTCTTCATGTAGTGCAGAGACCATTAATAGT +
Preference number: 3 (lower is better)
Translates to: NKIRNSQQCTAL*LSSCSAETINS
Trigger: ACTATTAATGGTCTCTGCACTACATGAAGACAATCACAAAGCTGTGCATTGCTGGGAATTTCTAATTTTATT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGAAGCTCCTCGGCCAGCTaGTCCCTGGCCCTGGACTCC +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRSSSAS*SLALDS
Trigger: GGAGTCCAGGGCCAGGGAGCAGCTGGCCGAGGAGCT...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGGGGTCACTGTGGGGATaGGTGACTCCGTGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLGSLWG*VTPCWL
Trigger: GAGCCAGCACGGAGTCACTCATCCCCACAGTGACCC...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp GTCTCAAAGGCAGAGGATGATCTGCTGAAATTCTTATCTCATGCGCAGCTTCCAAGCCCCTCTGGATGCTaGCCGACGGCAGCATGTGCA +
Preference number: 4 (lower is better)
Translates to: VSKAEDDLLKFLSHAQLPSPSGC*PTAACA
Trigger: TGCACATGCTGCCGTCGGTCAGCATCCAGAGGGGCT...TGGAAGCTGCGCATGAGATAAGAATTTCAGCAGATCATCCTCTGCCTTTGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133952.2
CDS-3UTR GCA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGCTCATCGCCTCCCTCTaGCTGCACAGCAGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLLIASL*LHSSCR
Trigger: ACGGCAGCTGCTGTGCAGGCAGAGGGAGGCGATGAG...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGAGCCCTGGACTCCTCCTaGAGGCGCTCTCGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRALDSS*RRSRSS
Trigger: AGAACTGCGAGAGCGCCTTCAGGAGGAGTCCAGGGC...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGGAGAAGACCTGGCCGTaGTTTCTCTCTGGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLEKTWP*FLSGPE
Trigger: CTCCGGGCCAGAGAGAAAGCACGGCCAGGTCTTCTC...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGATCGCCTCCCTCTGCCTaGACAGCAGCTGCCGTTCCT +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRSPPSA*TAAAVP
Trigger: AGGAACGGCAGCTGCTGTGCAGGCAGAGGGAGGCGA...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGATCCTGCTGCAGCTCCTaGAGGCGGGTGGTGGACTCT +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRSCCSS*RRVVDS
Trigger: AGAGTCCACCACCCGCCTGCAGGAGCTGCAGCAGGA...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACCGGCCAGCTGCTCCCTaGCCCTGGACTCCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYRPAAP*PWTPPE
Trigger: TTCAGGAGGAGTCCAGGGCCAGGGAGCAGCTGGCCG...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACACCTCACGAGCCGCTGTaGCAGCTCTGCTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTPHEPL*QLCSFL
Trigger: GAGGAAGGAGCAGAGCTGTCACAGCGGCTCGTGAGG...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGTTCTGCAGGGCAGCATaGTCAGTGTCAGGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLFCRAA*SVSGPR
Trigger: TCTGGGCCCTGACACTGATCATGCTGCCCTGCAGAA...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGACCATTTGGACCTGACTaGCCAGTGCAGCGGCGAACT +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRPFGPD*PVQRRT
Trigger: AGTTCGCCGCTGCACTGGTCAGTCAGGTCCAAATGG...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACCTGTGCTCAGGGACTTaGGCGCCTCACTCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYLCSGT*APHSAC
Trigger: ACAGGCTGAGTGAGGCGCGCAAGTCCCTGAGCACAG...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGACCAGCTAGGGGCAGCTaGTTTAGTGCTTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRPARGS*FSASSS
Trigger: GGAGCTGGAAGCACTAAAGCAGCTGCCCCTAGCTGG...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGTTGGCCCTGGGTGTTTaGCTCCTGTTCTGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLLALGV*LLFCLQ
Trigger: CTGCAGACAGAACAGGAGGCAAACACCCAGGGCCAA...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGGCTCCTGCAGGCGGGTaGTGGACTCTTTTCTCTGAA +
Preference number: 4 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLAPAGG*WTLFSE
Trigger: TTCAGAGAAAAGAGTCCACCACCCGCCTGCAGGAGC...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGAGGTTTGGTCACATCCTaGGCAGGGGCATCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRGLVTS*AGASSG
Trigger: GCCAGAAGATGCCCCTGCCCAGGATGTGACCAAACC...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGCGCCAAGCTCTCCCTTaGGTTCCTCCTTTTGAGCAT +
Preference number: 4 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLRQALP*VPPFEH
Trigger: ATGCTCAAAAGGAGGAACTCAAGGGAGAGCTTGGCG...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGACACTCTCAGCTTTATTaGGCTCCTCGGCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRHSQLY*APRPAA
Trigger: AGCAGCTGGCCGAGGAGCTCAATAAAGCTGAGAGTG...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGAGAATCTCCAGCTGCATaGGGAGCTCCTGGACCTCAT +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRESPAA*GAPGPH
Trigger: ATGAGGTCCAGGAGCTCCTCATGCAGCTGGAGATTC...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGATCTGCTGTTCAGTGCTaGCCACCTCCTGCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRSAVQC*PPPAAV
Trigger: AACTGCAGCAGGAGGTGGTCAGCACTGAACAGCAGA...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGGATTCCGAAAGCTGCTaGATGGAACGGTCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLDSESC*MERSSP
Trigger: TGGAGAGGACCGTTCCATTCAGCAGCTTTCGGAATC...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGACCTGTGTTTGCGTACTaGTGTGGCGCAGCTCACAAC +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRPVFAY*CGAAHN
Trigger: GTTGTGAGCTGCGCCACAGCAGTACGCAAACACAGG...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGACCTCTCTGGCTTGGTaGTCACTCACAGGCTGGATT +
Preference number: 4 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLTSLAW*SLTGWI
Trigger: AATCCAGCCTGTGAGTGAGCACCAAGCCAGAGAGGT...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACACTGGCACCCTCTCTCTaGTGTTCAGTGCTGACCACC +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTLAPSL*CSVLTT
Trigger: GGTGGTCAGCACTGAACAGCAGAGAGAGGGTGCCAG...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGGCTGATGAAACCGGCTaGTTTTCTTGGTGGAACGGC +
Preference number: 4 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLADETG*FSWWNG
Trigger: GCCGTTCCACCAAGAAAAGCAGCCGGTTTCATCAGC...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGAGTATGGGGGCCTCTCTaGTTTCCTGTTCTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRVWGPL*FPVLQS
Trigger: GGACTGGAGAACAGGAAAGCAGAGAGGCCCCCATAC...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAGAGAGAGCACCTGCATaGCCTCACTGTGGACAGCCT +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTERAPA*PHCGQP
Trigger: AGGCTGTCCACAGTGAGGGCATGCAGGTGCTCTCTC...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGACCATCTTCACGGCTCTaGAACTGGGCATACAGCTCC +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRPSSRL*NWAYSS
Trigger: GGAGCTGTATGCCCAGTTGCAGAGCCGTGAAGATGG...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACATCCTGGAGCTGGCGCTaGAGCTCTTCCACTTTGGAC +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTSWSWR*SSSTLD
Trigger: GTCCAAAGTGGAAGAGCTGCAGCGCCAGCTCCAGGA...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGAGTTTGCGTACTGCTGTaGCGCAGCTCACAACACAGC +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRVCVLL*RSSQHS
Trigger: GCTGTGTTGTGAGCTGCGCCACAGCAGTACGCAAAC...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAGGCAGGGGCATCTTCTaGCTGCAGATTGTCACTGCC +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTGRGIF*LQIVTA
Trigger: GGCAGTGACAATCTGCAGCCAGAAGATGCCCCTGCC...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACATTTTCCCGTCCCTCGTaGTGTCCCGACCTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTFSRPS*CPDLAF
Trigger: AAAGGCCAGGTCGGGACACCACGAGGGACGGGAAAA...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACTGCTGCCTTTTCTCCTaGAGCTGGCGCTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYCCLFS*SWRCSS
Trigger: AGAGCTGCAGCGCCAGCTCCAGGAGAAAAGGCAGCA...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGGCCAGAGACTTTCTCTaGGAGCTCCAACTTTTCTCG +
Preference number: 4 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLARDFL*ELQLFS
Trigger: CGAGAAAAGTTGGAGCTCTCAGAGAAAGTCTCTGGC...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGTCGGCTTTGAGGGCATaGAGCTCTTGCTGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLSALRA*SSCWSF
Trigger: AAAACTCCAGCAAGAGCTTCATGCCCTCAAAGCCGA...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACATGTCTGTTCTCTCTGTaGGCCCAGAGCAGCCACCTA +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTCLFSL*AQSSHL
Trigger: TAGGTGGCTGCTCTGGGCTCACAGAGAGAACAGACA...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACCAGCCTCTCCAGCTCTaGTTCTTGGGATTCCGCCAT +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYQPLQL*FLGFRH
Trigger: ATGGCGGAATCCCAAGAAGCAGAGCTGGAGAGGCTG...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGAACTCCTGGACTTCCTaGTCAAGGGTACCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLNSWTS*SRVPFS
Trigger: GGAGAAAGGTACCCTTGAGCAGGAAGTCCAGGAGTT...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACCAGAATCCCCGACCTTaGCCATCACAAGCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYQNPRP*PSQAQL
Trigger: AAGCTGGGCTTGTGATGGGCAAGGTCGGGGATTCTG...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGTTCTGCTCTGTGGTTTaGTTCGGTTTCCGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLFCSVV*FGFREL
Trigger: CAGCTCACGGAAACCGAAGCAAACCACAGAGCAGAA...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACCTGACCACCTCCTGCTaGAGTTTCTCAACCACCCCA +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYLTTSC*SFSTTP
Trigger: TGGGGTGGTTGAGAAACTGCAGCAGGAGGTGGTCAG...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGAGGCGCCAACAGAGCTTaGCAGGGACTCTATTTCTTG +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRGANRA*QGLYFL
Trigger: CAAGAAATAGAGTCCCTGGCAAGCTCTGTTGGCGCC...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACGAGAGAGAGAGCACCTaGATGCCCTCACTGTGGACA +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYEREST*MPSLWT
Trigger: TGTCCACAGTGAGGGCATGCAGGTGCTCTCTCTCTC...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACCCGGCTGTTTCAAACTaGAGCCTGCTGCAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYPAVSN*SLLQAF
Trigger: GAAAGCCTGCAGCAGGCTGCAGTTTGAAACAGCCGG...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTGCTGCTCCCTGGCCCTaGACTCCTCCTGAAGGCGCT +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSAAPWP*TPPEGA
Trigger: AGCGCCTTCAGGAGGAGTCCAGGGCCAGGGAGCAGC...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACTCAACCTCTCTGGCTTaGTGCTCACTCACAGGCTGG +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYSTSLA*CSLTGW
Trigger: CCAGCCTGTGAGTGAGCACCAAGCCAGAGAGGTTGA...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAAGGTGGCTCTGGTATaGGGGCCTCTCTGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTKVALV*GPLCFP
Trigger: AGGAAAGCAGAGAGGCCCCCATACCAGAGCCACCTT...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAACAGAAGGTGGCTCTaGTATGGGGGCCTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTNRRWL*YGGLSA
Trigger: AGCAGAGAGGCCCCCATACCAGAGCCACCTTCTGTT...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGTTGCATCTCAGACACTaGGTCATCTCCTTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLLHLRH*VISFRV
Trigger: GACCCTGAAGGAGATGACCCAGTGTCTGAGATGCAA...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACATGCATGCCCTCACTGTaGACAGCCTTCACTAACCCC +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTCMPSL*TAFTNP
Trigger: GGGGTTAGTGAAGGCTGTCCACAGTGAGGGCATGCA...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACCTTTTCTCCTGGAGCTaGCGCTGCAGCTCTTCCACT +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYLFSWS*RCSSST
Trigger: AGTGGAAGAGCTGCAGCGCCAGCTCCAGGAGAAAAG...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGTGTTCCTCAACTTCCTaGTCGTCATGTCCATCCTGT +
Preference number: 4 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLCSSTS*SSCPSC
Trigger: ACAGGATGGACATGACGATCAGGAAGTTGAGGAACA...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGCGCTCCACCTGCAACTaGACTTCTAGGGATAATTCT +
Preference number: 4 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLRSTCN*TSRDNS
Trigger: AGAATTATCCCTAGAAGTTCAGTTGCAGGTGGAGCG...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACACCACAAAAAGGCATATaGGCTGGGCCTCCATCTGCA +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTPQKGI*AGPPSA
Trigger: TGCAGATGGAGGCCCAGCGCATATGCCTTTTTGTGG...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGACTCCTTTTCCATGTGTaGACGAACCTGATCCGCATG +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRLLFHV*TNLIRM
Trigger: CATGCGGATCAGGTTCGTGCACACATGGAAAAGGAG...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGTGCTTTTGGAATTCCTaGATAAGCCCTTGCAGTCGC +
Preference number: 4 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLCFWNS*ISPCSR
Trigger: GCGACTGCAAGGGCTTATGCAGGAATTCCAAAAGCA...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACACAAACTGCAGCCTGCTaGAGGCTTTCTGGGCTACAT +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTQTAAC*RLSGLH
Trigger: ATGTAGCCCAGAAAGCCTGCAGCAGGCTGCAGTTTG...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGACCCGGGTACCTATTCTaGAATGGTAAGAGAGACCGA +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRPGYLF*NGKRDR
Trigger: TCGGTCTCTCTTACCATTGCAGAATAGGTACCCGGG...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGATGGGATCTACGGCAATaGATCTCTCCTCTTGTTCCG +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRWDLRQ*ISPLVP
Trigger: CGGAACAAGAGGAGAGATCCATTGCCGTAGATCCCA...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGTCTATGGAGGATTTCTaGGCTAGCTGCTCGTTGAGT +
Preference number: 4 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLSMEDF*ASCSLS
Trigger: ACTCAACGAGCAGCTAGCCCAGAAATCCTCCATAGA...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACATACTTCAACAGAAGGTaGCTCTGGTATGGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTYFNRR*LWYGGL
Trigger: GAGGCCCCCATACCAGAGCCACCTTCTGTTGAAGTA...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACCGTGGTGTCCCGACCTaGCCTTTTCCTTTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYRGVPT*PFPFPK
Trigger: CTTTGGAAAAGGAAAAGGCCAGGTCGGGACACCACG...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAACAACAGTCTCTGCTaGCTCCTGTGTGCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTNNSLC*LLCASS
Trigger: GCTACTGGCACACAGGAGCCAGCAGAGACTGTTGTT...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGATGCAGCTGTTGCTGTTaGGTGAAGATCTGTCGTTTG +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRCSCCC*VKICRL
Trigger: CAAACGACAGATCTTCACTCAACAGCAACAGCTGCA...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGCTGACTTTGCAAAGCTaGCTTTTCTCCCAGAACTAC +
Preference number: 4 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLLTLQS*LFSQNY
Trigger: GTAGTTCTGGGAGAAAAGTCAGCTTTGCAAAGTCAG...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGCTCTCTTCTCCTCTTTaGGAATGTTGTTCTCTGCGT +
Preference number: 4 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLLSSPL*ECCSLR
Trigger: ACGCAGAGAACAACATTCTCAAAGAGGAGAAGAGAG...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGTCATCAAGGTCATCATaGCTGGACAAAGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLSSRSS*LDKGTA
Trigger: AGCAGTTCCTTTGTCCAGTCATGATGACCTTGATGA...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTCACTGTGGGGATGAGTaGCTCCGTGCTGGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSHCGDE*LRAGSS
Trigger: ACTGGAGCCAGCACGGAGTCACTCATCCCCACAGTG...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGACAGTCCATTGCTGTGTaGTATTCAATGCCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRQSIAV*YSMPCS
Trigger: AGAGCAGGGCATTGAATATCACACAGCAATGGACTG...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACGGCTCATTCAGATTCTaGTCCACAAGGCCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYGSFRF*STRPLL
Trigger: AAGCAGAGGCCTTGTGGATCAGAATCTGAATGAGCC...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACGCTCCTCCAGCTTTATaGCAATGCTCCGTAAGGTGT +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYAPPAL*QCSVRC
Trigger: ACACCTTACGGAGCATTGTCATAAAGCTGGAGGAGC...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACACCTTCGGGTGGTTGGTaGTGGTCTTGGAATCTTTCA +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTPSGGW*WSWNLS
Trigger: TGAAAGATTCCAAGACCATCACCAACCACCCGAAGG...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGAACTCTTCAATATCATaGTGCTTCTCGGCCAACTCC +
Preference number: 4 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLNSSIS*CFSANS
Trigger: GGAGTTGGCCGAGAAGCAGCATGATATTGAAGAGTT...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGATCCTTCTCTCTCCTTaGTTGCTGCAAGTTAGCTGT +
Preference number: 4 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLILLSP*LLQVSC
Trigger: ACAGCTAACTTGCAGCAAGCAAGGAGAGAGAAGGAT...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACACGTTCTGCTGAGAGTTaGCCAGTTCTAGTTTCAGGC +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTRSAES*PVLVSG
Trigger: GCCTGAAACTAGAACTGGGCAACTCTCAGCAGAACG...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TCCAACAGTAAAGCACCTTTGGTTCTCATTTATCTCCATGTCTCAAAGGCAGAGGCCTCTCACATTCTCTaGTTTTCTCACTCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: SNSKAPLVLIYLHVSKAEASHIL*FSHSQA
Trigger: TGCCTGCGAGTGAGAAAAGCAGAGAATGTGAGAGGC...CTCTGCCTTTGAGACATGGAGATAAATGAGAACCAAAGGTGCTTTACTGTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133952.2
CDS-3UTR GCA 90 bp TCCAACAGTAAAGCACCTTTGGTTCTCATTTATCTCCATGTCTCAAAGGCAGAGTTCTGCTCTGTGGTTTaGTTCGGTTTCCGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: SNSKAPLVLIYLHVSKAEFCSVV*FGFREL
Trigger: CAGCTCACGGAAACCGAAGCAAACCACAGAGCAGAA...CTCTGCCTTTGAGACATGGAGATAAATGAGAACCAAAGGTGCTTTACTGTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133952.2
CDS-3UTR GCA 90 bp CATGTCTCAAAGGCAGAGGATGATCTGCTGAAATTCTTATCTCATGCGCAGCTTGCCTCAAGTCTCTGCTaGAAAGACTCAGTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: HVSKAEDDLLKFLSHAQLASSLC*KDSVSA
Trigger: AGCAGAAACTGAGTCTTTGCAGCAGAGACTTGAGGC...AAGCTGCGCATGAGATAAGAATTTCAGCAGATCATCCTCTGCCTTTGAGACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133952.2
CDS-3UTR GCA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGACAGCCTCAAGTCTCTaGTGCAAAGACTCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLTASSL*CKDSVS
Trigger: AGAAACTGAGTCTTTGCAGCAGAGACTTGAGGCTGT...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACTGTTGCATGTGGGCCTaGCTCAACATTTCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYCCMWA*LNISVA
Trigger: GGCAACAGAAATGTTGAGGCAGGCCCACATGCAACA...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACTCCAGCGCTTGGCTTTaGTGCCTTAGATCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYSSAWL*CLRSVS
Trigger: ACTCACAGATCTAAGGCAGCAAAGCCAAGCGCTGGA...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGATAGCAGCAGCTCACTaGACCTGTCTGTTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLIAAAH*TCLFSL
Trigger: AAGAGAAAACAGACAGGTGCAGTGAGCTGCTGCTAT...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGATCACTGCCTAGCTCATaGACAGTCATGTGGACACTT +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRSLPSS*TVMWTL
Trigger: AAGTGTCCACATGACTGTGCATGAGCTAGGCAGTGA...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACACTGCTGAGTTCCAGTTaGATTTCCAGCGACTGCTTC +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTLLSSS*ISSDCF
Trigger: GAAGCAGTCGCTGGAAATGCAACTGGAACTCAGCAG...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACTTGGACTGCAGCTCCTaGATTTTCTTTTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYLDCSS*IFFWPW
Trigger: CCAGGGCCAAAAGAAAATGCAGGAGCTGCAGTCCAA...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACATCTAGCTTGTACACCTaGTGCCTTTTCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTSSLYT*CLFSWS
Trigger: GCTCCAGGAGAAAAGGCAGCAGGTGTACAAGCTAGA...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGGTACACTTTTGCTTCTaGCCTCTTCAAGGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLVHFCF*PLQGFL
Trigger: CAGAAAGCCTTGAAGAGGGCAGAAGCAAAAGTGTAC...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACTCCAGCTCTGCTTCTTaGGATTCCGCCATTCTGTCT +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYSSSAS*DSAILS
Trigger: AGACAGAATGGCGGAATCCCAAGAAGCAGAGCTGGA...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGATGTCATGTGTTGCTATaGCAGTTCCAGGATAGGAGG +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRCHVLL*QFQDRR
Trigger: CCTCCTATCCTGGAACTGCCATAGCAACACATGACA...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTGCTCTCCTCATCTTCTaGGAGGGTCCTGGCACCCTC +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSALLIF*EGPGTL
Trigger: GAGGGTGCCAGGACCCTCCCAGAAGATGAGGAGAGC...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGATCTCTGACCTCTTCTTaGGAGCTCTCACTCTGTAAG +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRSLTSS*ELSLCK
Trigger: CTTACAGAGTGAGAGCTCCCAAGAAGAGGTCAGAGA...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACACCGAAAGCTGCTGAATaGAACGGTCCTCTCCATCAT +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTPKAAE*NGPLHH
Trigger: ATGATGGAGAGGACCGTTCCATTCAGCAGCTTTCGG...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGACAGTCCAGGAGTTCTTaGCTGCTTTTCTCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRQSRSS*LLFSVP
Trigger: AGGAACTGAGAAAAGCAGCCAAGAACTCCTGGACTG...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACTTTAGGCGCTTATGCTaGGCCTTGAGTGTTGTTCCC +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYFRRLC*ALSVVP
Trigger: GGGAACAACACTCAAGGCCCAGCATAAGCGCCTAAA...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACATCCTGCATTTTCTTTTaGCCCTGGGTGTTTGCCTCC +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTSCIFF*PWVFAS
Trigger: GGAGGCAAACACCCAGGGCCAAAAGAAAATGCAGGA...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
3UTR CAA 72 bp CGAAGCAAGGCATCGTTTCGTAGTTCAGCTTTTAGCTaGTACACTTTTGCTTCTGCCCTCTTCAAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: RSKASFRSSAFS*YTFASALFKAF
Trigger: GAAAGCCTTGAAGAGGGCAGAAGCAAAAGTGTACAAGCTAAAAGCTGAACTACGAAACGATGCCTTGCTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147629.2
CDS-3UTR TCA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGTCCTCATTAGCTCTTTaGTTTCCTCTGAACACTTCC +
Preference number: 4 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLSSLAL*FPLNTS
Trigger: GGAAGTGTTCAGAGGAAATCAAAGAGCTAATGAGGA...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTGAACCGGAGCCTCACTaGCAGCCTCAAGTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSEPEPH*QPQVSA
Trigger: AGCAGAGACTTGAGGCTGTCAGTGAGGCTCCGGTTC...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp GACAATGTAAGTAAAATTCCAACAGTAAAGCACCTTTGGTTCTCATTTATCTCCGAACCGGAGCCTCACTaGCAGCCTCAAGTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: DNVSKIPTVKHLWFSFISEPEPH*QPQVSA
Trigger: AGCAGAGACTTGAGGCTGTCAGTGAGGCTCCGGTTC...GGAGATAAATGAGAACCAAAGGTGCTTTACTGTTGGAATTTTACTTACATTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133952.2
CDS-3UTR TCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTGGATGCGTCTGCTTCTaGCCTCCAAAGCAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSGCVCF*PPKQAA
Trigger: AGCAGCCTGCTTTGGAGGTCAGAAGCAGACGCATCC...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGATTCCAGGCAATGAAGTaGCTCTGTTGCCTCTTGTTT +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRFQAMK*LCCLLF
Trigger: AAACAAGAGGCAACAGAGTCACTTCATTGCCTGGAA...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACAGTTCTTCCAGGCAATaGAGTGACTCTGTTGCCTCT +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYSSSRQ*SDSVAS
Trigger: AGAGGCAACAGAGTCACTTCATTGCCTGGAAGAACT...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAGCTTTCACTTGCTTCTaGAGGTCACCACGGACTTTT +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTAFTCF*RSPRTF
Trigger: AAAAGTCCGTGGTGACCTTCAGAAGCAAGTGAAAGC...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACTCAAATCCCTGGCTTTaGCCCCAGTCTGATTCAGAA +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYSNPWL*PQSDSE
Trigger: TTCTGAATCAGACTGGGGTCAAAGCCAGGGATTTGA...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACAATCCTAACTTGCTCTaGCTCCAGGAGAGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYNPNLL*LQESLK
Trigger: CTTCAAGCTCTCCTGGAGTCAGAGCAAGTTAGGATT...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACCCTTTTCTGAAGCAATaGTGGCTTCGATGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYPFLKQ*WLRCQL
Trigger: CAGCTGACATCGAAGCCATCATTGCTTCAGAAAAGG...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGAACCTGCTTCCTCTTCTaGCGCATTTTGTTCAGCAAA +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRTCFLF*RILFSK
Trigger: TTTGCTGAACAAAATGCGGCAGAAGAGGAAGCAGGT...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp CTCCATGTCTCAAAGGCAGAGGATGATCTGCTGAAATTCTTATCTCATGCGCAGTGTAACTCTTGGACTTaGCTCTCACATTCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: LHVSKAEDDLLKFLSHAQCNSWT*LSHSLL
Trigger: AAGCAGAGAATGTGAGAGGCAAGTCCAAGAGTTACA...CTGCGCATGAGATAAGAATTTCAGCAGATCATCCTCTGCCTTTGAGACATGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133952.2
CDS-3UTR GCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACGCCTCAAGTCTCTGCTaGAAAGACTCAGTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYASSLC*KDSVSA
Trigger: AGCAGAAACTGAGTCTTTGCAGCAGAGACTTGAGGC...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGTCTATCAGAAAACTTTaGTGTGCCATCCACACACTC +
Preference number: 4 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLSIRKL*CAIHTL
Trigger: GAGTGTGTGGATGGCACAGCAAAGTTTTCTGATAGA...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACTTCTCAAGGCTTCTCTaGAGGTCTGTGAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYFSRLL*RSVSFF
Trigger: GAAGAAGCTCACAGACCTGCAGAGAAGCCTTGAGAA...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACCTGCAGGCAGTCCATTaGTGTGTGATATTCAATGCC +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYLQAVH*CVIFNA
Trigger: GGCATTGAATATCACACAGCAATGGACTGCCTGCAG...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGCCAACTTTTCTCGCTTaGTTACTTCTAGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLPTFLA*LLLASP
Trigger: TGGAGAAGCTAGAAGTAACCAAGCGAGAAAAGTTGG...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAGGGCTCTGTAACTCTTaGACTTGCCTCTCACATTCT +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTGLCNS*TCLSHS
Trigger: AGAATGTGAGAGGCAAGTCCAAGAGTTACAGAGCCC...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TATCTCCATGTCTCAAAGGCAGAGGATGATCTGCTGAAATTCTTATCTCATGCGTCAGTTTCTGCTCTGTaGTTTGCTTCGGTTTCCGTG +
Preference number: 4 (lower is better)
Translates to: YLHVSKAEDDLLKFLSHASVSAL*FASVSV
Trigger: CACGGAAACCGAAGCAAACCACAGAGCAGAAACTGA...CGCATGAGATAAGAATTTCAGCAGATCATCCTCTGCCTTTGAGACATGGAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133952.2
CDS-3UTR CCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAACACCACAGAATCAATaGACAAGCTTGGCTGAACCG +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTTPQNQ*TSLAEP
Trigger: CGGTTCAGCCAAGCTTGTCCATTGATTCTGTGGTGT...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTTCTTGGAGCTGCTCCTaGTCTTCCCGTTGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSSWSCS*SSRCLS
Trigger: GGAGAGGCAACGGGAAGACCAGGAGCAGCTCCAAGA...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGAGCGTCATTACCTGGTTaGTGGTTTCTACTTGTTGCT +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRASLPG*WFLLVA
Trigger: AGCAACAAGTAGAAACCACCAACCAGGTAATGACGC...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACCTGTCTGTCTCAGACTaGGCTTGCTCTTGTATGGTT +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYLSVSD*ACSCMV
Trigger: AACCATACAAGAGCAAGCCCAGTCTGAGACAGACAG...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGAGTCTTTTCAATGCCTaGACTCAGTCCAAATCCATC +
Preference number: 4 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLSLFNA*TQSKSI
Trigger: GATGGATTTGGACTGAGTCCAGGCATTGAAAAGACT...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
3UTR CAA 72 bp GGGCACCGCAAGGTACTCGTCCAGCAGCACTGTCATTaGAAAAAGTTTAATCTTTTCACCCACCTGATAAAT +
Preference number: 4 (lower is better)
Translates to: GHRKVLVQQHCH*KKFNLFTHLIN
Trigger: ATTTATCAGGTGGGTGAAAAGATTAAACTTTTTCAAATGACAGTGCTGCTGGACGAGTACCTTGCGGTGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACGGAGGAGTCATCAAGTaGAAATTCTTCTTCCTCCGA +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYGGVIK*KFFFLR
Trigger: TCGGAGGAAGAAGAATTTTCACTTGATGACTCCTCC...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGAATCATCTCTTATCTTaGGCAGACAAGTATACTCCC +
Preference number: 4 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLNHLLS*ADKYTP
Trigger: GGGAGTATACTTGTCTGCTCAAGATAAGAGATGATT...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACGTTGAAGTCGTTCAATaGGCACCTGTAAAGGCTCAT +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYVEVVQ*APVKAH
Trigger: ATGAGCCTTTACAGGTGCTCATTGAACGACTTCAAC...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGAGAGAGTTCCGTCTGTTaGGCAAATGCTATACTCATT +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRESSVC*ANAILI
Trigger: AATGAGTATAGCATTTGCTCAACAGACGGAACTCTC...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAACCCTTTCTCTCTCTaGAACCACGTGTTCAGTATC +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTNPFSL*NHVFSI
Trigger: GATACTGAACACGTGGTTTCAGAGAGAGAAAGGGTT...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACTTCTGTATCTCCTGCTaGAAAACATCTCTCTCGTGC +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYFCISC*KTSLSC
Trigger: GCACGAGAGAGATGTTTTTCAGCAGGAGATACAGAA...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGAGAGATGAGATGGTATTaGGGTAAGCTTGTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTREMRWY*GKLVSL
Trigger: AAGAGAGACAAGCTTACCTCAATACCATCTCATCTC...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGTTTCAATCAACTTTGTaGAGTTCCTGTCTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLFQSTL*SSCLWP
Trigger: AGGCCAAAGACAGGAACTTCACAAAGTTGATTGAAA...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGAGCTGGATCAATAAATaGGAACCTAGAACAACAGTC +
Preference number: 4 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLSWINK*EPRTTV
Trigger: GACTGTTGTTCTAGGTTCTCATTTATTGATCCAGCT...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGATGTAACTCTTGGACTTaGCTCTCACATTCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRCNSWT*LSHSLL
Trigger: AAGCAGAGAATGTGAGAGGCAAGTCCAAGAGTTACA...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACACAAAGACTCAGTTTCTaGTCTGTGGTTTGCTTCGGT +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTQRLSF*SVVCFG
Trigger: ACCGAAGCAAACCACAGAGCAGAAACTGAGTCTTTG...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TATCTCCATGTCTCAAAGGCAGAGGATGATCTGCTGAAATTCTTATCTCATGCGCAAAGACTCAGTTTCTaGTCTGTGGTTTGCTTCGGT +
Preference number: 4 (lower is better)
Translates to: YLHVSKAEDDLLKFLSHAQRLSF*SVVCFG
Trigger: ACCGAAGCAAACCACAGAGCAGAAACTGAGTCTTTG...CGCATGAGATAAGAATTTCAGCAGATCATCCTCTGCCTTTGAGACATGGAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133952.2
CDS-3UTR GCA 90 bp TATCTCCATGTCTCAAAGGCAGAGGATGATCTGCTGAAATTCTTATCTCATGCGACAGCCTCAAGTCTCTaGTGCAAAGACTCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: YLHVSKAEDDLLKFLSHATASSL*CKDSVS
Trigger: AGAAACTGAGTCTTTGCAGCAGAGACTTGAGGCTGT...CGCATGAGATAAGAATTTCAGCAGATCATCCTCTGCCTTTGAGACATGGAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133952.2
CDS-3UTR GCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGACAGAAAACTTTGCTGTaGCATCCACACACTCTCTTA +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRQKTLL*HPHTLL
Trigger: TAAGAGAGTGTGTGGATGGCACAGCAAAGTTTTCTG...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACTGTCGCACAAGTTCTTaGCGCATATCTTCCAACTGT +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYCRTSS*RISSNC
Trigger: ACAGTTGGAAGATATGCGGCAAGAACTTGTGCGACA...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTTGCCTCTCCATCTGTTaGATGTGGGCCTGCCTCAAC +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSCLSIC*MWACLN
Trigger: GTTGAGGCAGGCCCACATGCAACAGATGGAGAGGCA...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGAAATGCTGTCATGTGTTaGTATGGCAGTTCCAGGATA +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRNAVMC*YGSSRI
Trigger: TATCCTGGAACTGCCATAGCAACACATGACAGCATT...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTGGGGCATCTTCTGGCTaGAGATTGTCACTGCCTAGC +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSGASSG*RLSLPS
Trigger: GCTAGGCAGTGACAATCTGCAGCCAGAAGATGCCCC...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTGAACTCAGCTGTTCCTaGAGCTCGGCTGCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSELSCS*SSAALS
Trigger: AGACAGAGCAGCCGAGCTGCAGGAACAGCTGAGTTC...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGTTAACAGTTCTACTATaGGGCTGTGTTTTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLLTVLL*GCVFPP
Trigger: TGGAGGAAAAACACAGCCGCATAGTAGAACTGTTAA...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACTCATCCAGCTCTGCTTaGAGATGGCTTAATTTCCGT +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYSSSSA*RWLNFR
Trigger: ACGGAAATTAAGCCATCTCCAAGCAGAGCTGGATGA...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAATTCCAATGCCTGCTTaGTCTGTGTGGCCTCTAAAT +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTIPMPA*SVWPLN
Trigger: ATTTAGAGGCCACACAGACCAAGCAGGCATTGGAAT...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGATTCCAGCGTCTCAGATaGGAAAATTCCAGAACTCTT +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRFQRLR*ENSRTL
Trigger: AAGAGTTCTGGAATTTTCCCATCTGAGACGCTGGAA...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACACGTGTTCAGTATCTATaGAGGATTTCTGGGCTAGCT +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTRVQYL*RISGLA
Trigger: AGCTAGCCCAGAAATCCTCCATAGATACTGAACACG...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTGCTGCAGTTGCTCCTTaGATAGCAGCAGCTCACTGC +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSAAVAP*IAAAHC
Trigger: GCAGTGAGCTGCTGCTATCCAAGGAGCAACTGCAGC...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTCATCACAGAGGGGACTaGAGAGAGAGAGCACCTGCA +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSHHRGD*RERAPA
Trigger: TGCAGGTGCTCTCTCTCTCCAGTCCCCTCTGTGATG...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAATTTTCTTTTGGCCCTaGGTGTTTGCCTCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTIFFWP*VFASCS
Trigger: AGAACAGGAGGCAAACACCCAGGGCCAAAAGAAAAT...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTAGCCACAGGAAGAACTaGGGGGTCCTAAGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSSHRKN*GVLSCA
Trigger: AGCACAGCTTAGGACCCCCCAGTTCTTCCTGTGGCT...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTCTGTCGCAGTTCGGCTaGGAGTGCTGTTTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSLSQFG*ECCFAK
Trigger: CTTTGCAAAACAGCACTCTCAGCCGAACTGCGACAG...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGATTTTCCAGAATTAACTaGTTCTGCTGGGTTATCAGG +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRFSRIN*FCWVIR
Trigger: CCTGATAACCCAGCAGAATCAGTTAATTCTGGAAAA...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACATCGATCTTTTTCTGTTaGGCGGAAATGAGCTCATCT +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTSIFFC*AEMSSS
Trigger: AGATGAGCTCATTTCCGCTCAACAGAAAAAGATCGA...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGAAGGGTCTTTGAAATGTaGAAGCATTTCTCAGACACT +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRRVFEM*KHFSDT
Trigger: AGTGTCTGAGAAATGCTTTCACATTTCAAAGACCCT...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGATCTTCCAGTCGTTCTTaGTACTGTTTTTCCATCAAG +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRSSSRS*YCFSIK
Trigger: CTTGATGGAAAAACAGTATCAAGAACGACTGGAAGA...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACAGAAGTATCCATACTTaGCACCAACACCTCATCATG +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYRSIHT*HQHLIM
Trigger: CATGATGAGGTGTTGGTGTCAAGTATGGATACTTCT...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTGGCACAGCCTTAAGCTaGTGCTCCAGCTTCTGTATC +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSGTALS*CSSFCI
Trigger: GATACAGAAGCTGGAGCATCAGCTTAAGGCTGTGCC...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTTCCTCATTCCTCTCCTaGATGTCTCGCTGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSSSFLS*MSRCSC
Trigger: GCAACTGCAGCGAGACATTCAGGAGAGGAATGAGGA...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTGCGCCTCTAGCCGAGTaGCGTAATCTGTCAGAGATT +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSAPLAE*RNLSEI
Trigger: AATCTCTGACAGATTACGTCACTCGGCTAGAGGCGC...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACCCTCAACATTTCTGTTaGCTGCTGGTGTTCTTCATA +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYPQHFC*LLVFFI
Trigger: TATGAAGAACACCAGCAGGCAACAGAAATGTTGAGG...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACATTAGCTGTGCAAATTTaGCAAACAGCATGGGCTGAT +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTLAVQI*QTAWAD
Trigger: ATCAGCCCATGCTGTTTGGCAAATTTGCACAGCTAA...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACACATTCTGTATATCTGTaGTTCCGGGTGCTGATGAAA +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTHSVYL*FRVLMK
Trigger: TTTCATCAGCACCCGGAAGCACAGATATACAGAATG...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGATTTTCCAAAGCCCACTaGAGCTCTAATGAATTCTTC +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRFSKAH*SSNEFF
Trigger: GAAGAATTCATTAGAGCTGCAGTGGGCTTTGGAAAA...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACTCTTCCACTTTGGACTaGAGCTCCTGCATTTTCTTT +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYSSTLD*SSCIFF
Trigger: AAAGAAAATGCAGGAGCTGCAGTCCAAAGTGGAAGA...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTAGCTTGTACACCTGCTaGCTTTTCTCCTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSSLYTC*LFSWSW
Trigger: CCAGCTCCAGGAGAAAAGGCAGCAGGTGTACAAGCT...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGATTTCTCTCTTATGTTaGGATTTGAGCTCCTCTATC +
Preference number: 4 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLISLLC*DLSSSI
Trigger: GATAGAGGAGCTCAAATCCCAACATAAGAGAGAAAT...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAGAGCGTACCTTTCATTaGACAGGTTTCTATCGAGAA +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTERTFH*TGFYRE
Trigger: TTCTCGATAGAAACCTGTCCAATGAAAGGTACGCTC...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGAATCCCAAGAACATaGCGGCCAATTGTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTRIPRT*RPIVSS
Trigger: TGAAGAAACAATTGGCCGCCATGTTCTTGGGATTCT...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTCCTGCAGGCGGGTGGTaGACTCTTTTCTCTGAATCT +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSPAGGW*TLFSES
Trigger: AGATTCAGAGAAAAGAGTCCACCACCCGCCTGCAGG...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAATGTGCGTCATTACCTaGTTGGTGGTTTCTACTTGT +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTMCVIT*LVVSTC
Trigger: ACAAGTAGAAACCACCAACCAGGTAATGACGCACAT...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGAGGAGAATGATAGAATaGATCAGTCTTTTCAATGCC +
Preference number: 4 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLRRMIE*ISLFNA
Trigger: GGCATTGAAAAGACTGATCCATTCTATCATTCTCCT...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
3UTR CAA 72 bp AACTCCAGTTTGTCTTCATGTGCTGCTGCTAAGGATTaGTATACAATCATAAGCTGTGCATGTATTGGTCCC +
Preference number: 4 (lower is better)
Translates to: NSSLSSCAAAKD*YTIISCACIGP
Trigger: GGGACCAATACATGCACAGCTTATGATTGTATACAAATCCTTAGCAGCAGCACATGAAGACAAACTGGAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACAAGAGGTCATTAGACTaGCTTTGCAAAGCTGACTTT +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYKRSLD*LCKADF
Trigger: AAAGTCAGCTTTGCAAAGTCAGTCTAATGACCTCTT...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGAAATTGGTGTTTGTTTTaGGAACATAGAGTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRNWCLF*EHRVCA
Trigger: AGCACACACTCTATGTTCTCAAAACAAACACCAATT...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTTCTGTGAGCTTCTTCTaGAGCCTGTCTGTCTCAGAC +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSSVSFF*SLSVSD
Trigger: GTCTGAGACAGACAGGCTTCAGAAGAAGCTCACAGA...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTTTCTCTGCAGGTCTGTaGGCTTCTTCTGAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSFSAGL*ASSEAC
Trigger: ACAGGCTTCAGAAGAAGCTCACAGACCTGCAGAGAA...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTGCTTATGCTGGGCCTTaGGTGTTGTTCCCAATTCCA +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSAYAGP*VLFPIP
Trigger: TGGAATTGGGAACAACACTCAAGGCCCAGCATAAGC...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACTTTCTGATCCTCAAGTaGAAATTTCAGATCCTCGAG +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYFLILK*KFQILE
Trigger: CTCGAGGATCTGAAATTTTCACTTGAGGATCAGAAA...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGAATCATTTCCAAGTCATaGTTATGGTCAAGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRIISKS*LWSSSP
Trigger: AGGAGAACTTGACCATAATCATGACTTGGAAATGAT...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACACTCTTCAAGGCTTTCTaGAGAGATAACTTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTLFKAF*RDNFSL
Trigger: CAGAGAAAAGTTATCTCTTCAGAAAGCCTTGAAGAG...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGAAGCTTTCCGGAAACTTaGAGCTCTCAAGTATTTATT +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRSFPET*SSQVFI
Trigger: AATAAATACTTGAGAGCTTCAAGTTTCCGGAAAGCT...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACCGAGCTACATTCATCTaGAGTGGTAGAAATTTCACT +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYRATFI*SGRNFT
Trigger: AGTGAAATTTCTACCACTGCAGATGAATGTAGCTCG...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGATCATCAATGAGTGCCTaGTTCTCCTGTATTTCTTTT +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRSSMSA*FSCISF
Trigger: AAAAGAAATACAGGAGAAGCAGGCACTCATTGATGA...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGAACTCTTGTTTCATTTaGACTATTTGCTTCCCATAC +
Preference number: 4 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLNSCFI*TICFPY
Trigger: GTATGGGAAGCAAATAGTGCAAATGAAACAAGAGTT...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGAGCAAACGTATTCCTTTaGTTCTCGATCTCTTCATTT +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRANVFL*FSISSF
Trigger: AAATGAAGAGATCGAGAAGCAAAGGAATACGTTTGC...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTCCAGCGCTCTCAGCTTaGTCTCATATTCCAATGCCT +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSPALSA*SHIPMP
Trigger: AGGCATTGGAATATGAGAGCAAGCTGAGAGCGCTGG...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACATGGTACAATGGGTCTaGTTTAGTTGTTCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYMVQWV*FSCSER
Trigger: CCTTTCTGAACAACTAAAGCAGACCCATTGTACCAT...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTCACAGGGCAGACAGCTaGATTTTCTGTTCCACTAGG +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSHRADS*IFCSTR
Trigger: CCTAGTGGAACAGAAAATGCAGCTGTCTGCCCTGTG...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACACAAGAAGGACTTGCATaGTCTCTTGAAAGTCTTGAA +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTQEGLA*SLESLE
Trigger: TTCAAGACTTTCAAGAGAGCATGCAAGTCCTTCTTG...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp AATTCCAACAGTAAAGCACCTTTGGTTCTCATTTATCTCCATGTCTCAAAGGCAACCTGCTTCCTCTTCTaGCGCATTTTGTTCAGCAAA +
Preference number: 4 (lower is better)
Translates to: NSNSKAPLVLIYLHVSKATCFLF*RILFSK
Trigger: TTTGCTGAACAAAATGCGGCAGAAGAGGAAGCAGGT...TGCCTTTGAGACATGGAGATAAATGAGAACCAAAGGTGCTTTACTGTTGGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133952.2
CDS-3UTR GCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTGCCTCTCACATTCTCTaGTTTTCTCACTCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSASHIL*FSHSQA
Trigger: TGCCTGCGAGTGAGAAAAGCAGAGAATGTGAGAGGC...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAAAATTCTTGTCCGTTaGCTCAAAAGTCTGAAGACC +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTKILVR*LKSLKT
Trigger: GGTCTTCAGACTTTTGAGGCAACGGACAAGAATTTT...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGACCAACACCTCATCATaGATAGATTTTCTCACTATA +
Preference number: 4 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLTNTSS*IDFLTI
Trigger: TATAGTGAGAAAATCTATGCATGATGAGGTGTTGGT...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGAACCTCCTGCTCAAGATaGTCTATAATATCGGTTTTT +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRTSCSR*SIISVF
Trigger: AAAAACCGATATTATAGAGCATCTTGAGCAGGAGGT...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGATACATAACACCTCCTaGTCAAGATGCTCTATAATA +
Preference number: 4 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLIHNTS*SRCSII
Trigger: TATTATAGAGCATCTTGAGCAGGAGGTGTTATGTAT...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTCTCCTATCTGCTTTCTaGAGGCAGTCCATTGCTGTG +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSLLSAF*RQSIAV
Trigger: CACAGCAATGGACTGCCTGCAGAAAGCAGATAGGAG...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACATCCCAATTCCAGTTTTaGCTGTGCAAGTTCACTTTT +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTSQFQF*LCKFTF
Trigger: AAAAGTGAACTTGCACAGGCAAAACTGGAATTGGGA...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAGATAACTGGGCATCATaGAACATTTTCTGTGACTCT +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTDNWAS*NIFCDS
Trigger: AGAGTCACAGAAAATGTTGCATGATGCCCAGTTATC...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTTCCGGCTCCAGCTCCTaGTTTTGGAATTCCTGCATA +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSSGSSS*FWNSCI
Trigger: TATGCAGGAATTCCAAAAGCAGGAGCTGGAGCCGGA...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACACTGAATCCAAATAAATaGATCATCACCGGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTLNPNK*IITGCF
Trigger: GAAACAGCCGGTGATGATGCATTTATTTGGATTCAG...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp ATTTATTATAAATTTTCTGCAGGGCAGCATGATCAGTGTCAGGGCCCAGATTCCCTGAATCCAAATAAATaGATCATCACCGGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: IYYKFSAGQHDQCQGPDSLNPNK*IITGCF
Trigger: GAAACAGCCGGTGATGATGCATTTATTTGGATTCAG...GGAATCTGGGCCCTGACACTGATCATGCTGCCCTGCAGAAAATTTATAATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147629.2
CDS-3UTR CCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACTTTTTGTGCTCTTGTTaGCAAGAGCAACTGTTCTCT +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYFLCSC*QEQLFS
Trigger: AGAGAACAGTTGCTCTTGCCAACAAGAGCACAAAAA...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTATCAATGGACAAGCTTaGCTGAACCGGAGCCTCACT +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSINGQA*LNRSLT
Trigger: AGTGAGGCTCCGGTTCAGCCAAGCTTGTCCATTGAT...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTTGCTCACTCACAGGCTaGATTCTAGGCACAGCCTTA +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSCSLTG*ILGTAL
Trigger: TAAGGCTGTGCCTAGAATCCAGCCTGTGAGTGAGCA...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACATCATTACCTGGTTGGTaGTTTCTACTTGTTGCTCTA +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTSLPGW*FLLVAL
Trigger: TAGAGCAACAAGTAGAAACCACCAACCAGGTAATGA...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTGTTTTTCTAGAGGTTTaGTCACATCCTGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSVFLEV*SHPGQG
Trigger: CCCCTGCCCAGGATGTGACCAAACCTCTAGAAAAAC...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAGTATCACTAAGGAAATaGATTTCATCCGTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTVSLRK*ISSVFS
Trigger: GGAGAAGACGGATGAAATCCATTTCCTTAGTGATAC...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTGCAGCTCTTCCACTTTaGACTGCAGCTCCTGCATTT +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSAALPL*TAAPAF
Trigger: AAATGCAGGAGCTGCAGTCCAAAGTGGAAGAGCTGC...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACGGAAAATATTTCTTCTaGAATAGCCAGTCCATGTTC +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYGKYFF*NSQSMF
Trigger: GAACATGGACTGGCTATTTCAGAAGAAATATTTTCC...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAGTATTTCTCCGTTTCTaGTCCTCAAGTGAAAATTTC +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTVFLRF*SSSENF
Trigger: GAAATTTTCACTTGAGGATCAGAAACGGAGAAATAC...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAATGCAACATTTTCTGTaGCTCTATTTTCTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTMQHFL*LYFLLR
Trigger: TCTCAGCAGAAAATAGAGTCACAGAAAATGTTGCAT...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTGTGCTCTTCATCTCCTaGATCCTAACTTGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSVLFIS*ILTCSD
Trigger: GTCAGAGCAAGTTAGGATTCAGGAGATGAAGAGCAC...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp ACAATGCTCCGTAAGGTGTTCTTTTCTTCTGTTAGTTGGTTGATAAGTCTTGTTTACATGCTGAAGTTTTaGAGCCACATGCTGGAGTGT +
Preference number: 4 (lower is better)
Translates to: TMLRKVFFSSVSWLISLVYMLKF*SHMLEC
Trigger: ACACTCCAGCATGTGGCTTCAAAACTTCAGCATGTA...AACAAGACTTATCAACCAACTAACAGAAGAAAAGAACACCTTACGGAGCATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147629.2
CDS-3UTR GCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTCCTGTTCTCTTGCTCTaGGATTGTCTGCCTAGCTTT +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSPVLLL*DCLPSF
Trigger: AAAGCTAGGCAGACAATCGCAGAGCAAGAGAACAGG...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTCTCTGCGTCCAGCTGTaGACATTTTTCTTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSLCVQL*TFFLKV
Trigger: GACCTTCAAGAAAAATGTGCACAGCTGGACGCAGAG...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTTCCTTTAGGCGCTTATaGTGGGCCTTGAGTGTTGTT +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSSFRRL*WALSVV
Trigger: AACAACACTCAAGGCCCAGCATAAGCGCCTAAAGGA...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp GTAAGTAAAATTCCAACAGTAAAGCACCTTTGGTTCTCATTTATCTCCATGTCTGGGCTCTGTAACTCTTaGACTTGCCTCTCACATTCT +
Preference number: 4 (lower is better)
Translates to: VSKIPTVKHLWFSFISMSGLCNS*TCLSHS
Trigger: AGAATGTGAGAGGCAAGTCCAAGAGTTACAGAGCCC...AGACATGGAGATAAATGAGAACCAAAGGTGCTTTACTGTTGGAATTTTACTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000133952.2
CDS-3UTR CCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTTCAGTTTCTGCTCTGTaGTTTGCTTCGGTTTCCGTG +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSSVSAL*FASVSV
Trigger: CACGGAAACCGAAGCAAACCACAGAGCAGAAACTGA...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGAGAAGTTCTTCATTGCTaGCACATTCTTTATTCAAGT +
Preference number: 4 (lower is better)
Translates to: MKAEQNHTLDPELRQVTREVLHC*HILYSS
Trigger: ACTTGAATAAAGAATGTGCCAGCAATGAAGAACTTC...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACGATGTCAGCTCAGTTTaGAATGTAGCTAGTAAAACA +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYDVSSV*NVASKT
Trigger: TGTTTTACTAGCTACATTCCAAACTGAGCTGACATC...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTTCCAGCTCCTGCTTTTaGAATTCCTGCATAAGCCCT +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSSSSCF*NSCISP
Trigger: AGGGCTTATGCAGGAATTCCAAAAGCAGGAGCTGGA...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTCTGATCCGCATGAGTTaGGTAAACCACAAAAAGGCA +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSLIRMS*VNHKKA
Trigger: TGCCTTTTTGTGGTTTACTCAACTCATGCGGATCAG...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTTCCCACAAGTTTTTCTaGCATTGTACCACTGTGCAC +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSSHKFF*HCTTVH
Trigger: GTGCACAGTGGTACAATGTCAGAAAAACTTGTGGGA...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTGCTTTGACCCCAGTCTaGTTCAGAATCACTGGAATA +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSALTPV*FRITGI
Trigger: TATTCCAGTGATTCTGAATCAGACTGGGGTCAAAGC...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTTACATGCTGAAGTTTTaGAGCCACATGCTGGAGTGT +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSYMLKF*SHMLEC
Trigger: ACACTCCAGCATGTGGCTTCAAAACTTCAGCATGTA...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACAGTTTAAGTTGCTGCTaGAGTTTTATAAACTGCTCA +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYSLSCC*SFINCS
Trigger: TGAGCAGTTTATAAAACTGCAGCAGCAACTTAAACT...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACTTGGAAGTTCTTCATTaGTGGCACATTCTTTATTCA +
Preference number: 4 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYLEVLH*WHILYS
Trigger: TGAATAAAGAATGTGCCAGCAATGAAGAACTTCCAA...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTGGGCTTGCTCTTGTATaGTTTCTGTTTGTTCACGAC +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSGLALV*FLFVHD
Trigger: GTCGTGAACAAACAGAAACCATACAAGAGCAAGCCC...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACACTGATTCAGAATCACTaGAATAGACTTCTCTACTTT +
Preference number: 4 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTLIQNH*NRLLYF
Trigger: AAAGTAGAGAAGTCTATTCCAGTGATTCTGAATCAG...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTTATTCAACTCATCAATaGGTGCCTGCTTCTCCTGTA +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSYSTHQ*VPASPV
Trigger: TACAGGAGAAGCAGGCACTCATTGATGAGTTGAATA...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTGTCTGCCTAGCTTTCTaGACTTGCTCTCTTAAAAAC +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSVCLAF*TCSLKN
Trigger: GTTTTTAAGAGAGCAAGTTCAGAAAGCTAGGCAGAC...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTCGGACTTTTTCAGCTTaGCACTGTACTTCCAACTTT +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSRTFSA*HCTSNF
Trigger: AAAGTTGGAAGTACAGTGTCAAGCTGAAAAAGTCCG...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTTTTATGAAAACACGCTaGCAGGCAAGCAGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSFMKTR*QASRSS
Trigger: TGAACTTCTGCTTGCCTGTCAGCGTGTTTTCATAAA...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTCAACTCATCAATGAGTaGCTGCTTCTCCTGTATTTC +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSQLINE*LLLLYF
Trigger: GAAATACAGGAGAAGCAGGCACTCATTGATGAGTTG...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
3UTR CAA 72 bp CTAGACTTTGATCAAGTCCCTCCTTTTACTGTGTGGTaGTTAAGACTTTTAAGTCATAGACGTGTTAGGTTA +
Preference number: 4 (lower is better)
Translates to: LDFDQVPPFTVW*LRLLSHRRVRL
Trigger: TAACCTAACACGTCTATGACTTAAAAGTCTTAACAACCACACAGTAAAAGGAGGGACTTGATCAAAGTCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTGTTCTTCTAGGTTGGTaGTCTCTTTCTGTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSVLLGW*SLSVFC
Trigger: ACAGAAAACAGAAAGAGATCACCAACCTAGAAGAAC...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR TCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTGACTCTATTTTCTGCTaGGATTCATTTAGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSDSIFC*DSFSSC
Trigger: GCAGCTACTAAATGAATCTCAGCAGAAAATAGAGTC...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTTCCTTTTCCATCTGTTaGCTTGTTTGCAAGGAATCT +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSSFSIC*LVCKES
Trigger: AGATTCCTTGCAAACAAGGCAACAGATGGAAAAGGA...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTGTTCAAGCTGAGTGTTaGTTTCACTTATGGCTTCTA +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSVQAEC*FHLWLL
Trigger: TAGAAGCCATAAGTGAAACCAACACTCAGCTTGAAC...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR GCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTGTGAGTTTAAGTTGCTaGTGCAGTTTTATAAACTGC +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSVSLSC*CSFINC
Trigger: GCAGTTTATAAAACTGCAGCAGCAACTTAAACTCAC...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTTTTTTCACTTTCACATaGTTCAACTGTCGCATGAGA +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSFFTFT*FNCRMR
Trigger: TCTCATGCGACAGTTGAACCATGTGAAAGTGAAAAA...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
36% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
3UTR CAA 72 bp ATGCTCCGTAAGGTGTTCTTTTCTTCTGTTAGTTGGTaGATAAGTCTTGTTAACTCAGTATTTTGTCTCATT +
Preference number: 4 (lower is better)
Translates to: MLRKVFFSSVSW*ISLVNSVFCLI
Trigger: AATGAGACAAAATACTGAGTTAACAAGACTTATCAACCAACTAACAGAAGAAAAGAACACCTTACGGAGCAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147629.2
CDS-3UTR GCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTGTTGTGAGTTTAAGTTaGTGCTGCAGTTTTATAAAC +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSVVSLS*CCSFIN
Trigger: GTTTATAAAACTGCAGCAGCAACTTAAACTCACAAC...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTTGTTGGTTTCACTTATaGCTTCTAGGAGTTTTTCAA +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSCWFHL*LLGVFQ
Trigger: TTGAAAAACTCCTAGAAGCCATAAGTGAAACCAACA...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CCA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTAATCAGATTCCTTCATaGCAAACCCAAGTTTTTCTA +
Preference number: 4 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSNQIPS*QTQVFL
Trigger: TAGAAAAACTTGGGTTTGCCATGAAGGAATCTGATT...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 90 bp GCTGCTCCACGGGGCCAGCCTCTGCTCTCATCGCCTCCCTCTGCCTaGACAGCAGCTGCCGTTCCTCTTCCACCCGGCGTTGGTCTGACT +
Preference number: 5 (lower is better)
Translates to: AAPRGQPLLSSPPSA*TAAAVPLPPGVGLT
Trigger: AGTCAGACCAACGCCGGGTGGAAGAGGAACGGCAGCTGCTGTGCAGGCAGAGGGAGGCGATGAGAGCAGAGGCTGGCCCCGTGGAGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000238634.2
CDS GCA 90 bp GGGCCAGCCTCTGCTCTCATCGCCTCCCTCTGCCTGCACAGCAGCTaGCGTTCCTCTTCCACCCGGCGTTGGTCTGACTCTAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: GPASALIASLCLHSS*RSSSTRRWSDSSSC
Trigger: GCAGGAGCTAGAGTCAGACCAACGCCGGGTGGAAGAGGAACGGCAGCTGCTGTGCAGGCAGAGGGAGGCGATGAGAGCAGAGGCTGGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000238634.2
CDS GCA 90 bp AATTGCTGCTCCACGGGGCCAGCCTCTGCTCTCATCGCCTCCCTCTaGCTGCACAGCAGCTGCCGTTCCTCTTCCACCCGGCGTTGGTCT +
Preference number: 5 (lower is better)
Translates to: NCCSTGPASALIASL*LHSSCRSSSTRRWS
Trigger: AGACCAACGCCGGGTGGAAGAGGAACGGCAGCTGCTGTGCAGGCAGAGGGAGGCGATGAGAGCAGAGGCTGGCCCCGTGGAGCAGCAATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000238634.2
CDS GCA 90 bp TGTAGCTCTTTAAGTAGGTCCTCAGAAGGCAAGGCTGGCGGGGGCTaGCCGCCATCTTCACGGCTCTGCAACTGGGCATACAGCTCCCGT +
Preference number: 5 (lower is better)
Translates to: CSSLSRSSEGKAGGG*PPSSRLCNWAYSSR
Trigger: ACGGGAGCTGTATGCCCAGTTGCAGAGCCGTGAAGATGGCGGGCAGCCCCCGCCAGCCTTGCCTTCTGAGGACCTACTTAAAGAGCTACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CCA 90 bp CGCTTTCCCTCCAGGTCTAGCTTGTACACCTGCTGCCTTTTCTCCTaGAGCTGGCGCTGCAGCTCTTCCACTTTGGACTGCAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: RFPSRSSLYTCCLFS*SWRCSSSTLDCSSC
Trigger: GCAGGAGCTGCAGTCCAAAGTGGAAGAGCTGCAGCGCCAGCTCCAGGAGAAAAGGCAGCAGGTGTACAAGCTAGACCTGGAGGGAAAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000176863.2
CDS TCA 90 bp GGTGGAACGGCACATACTCCTGAGCTGCCTCCATTTGGACCTGACTaGCCAGTGCAGCGGCGAACTTCTCAAGGCTTCTCTGCAGGTCTG +
Preference number: 5 (lower is better)
Translates to: GGTAHTPELPPFGPD*PVQRRTSQGFSAGL
Trigger: CAGACCTGCAGAGAAGCCTTGAGAAGTTCGCCGCTGCACTGGTCAGTCAGGTCCAAATGGAGGCAGCTCAGGAGTATGTGCCGTTCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 90 bp AGGGTCCTGGCACCCTCTCTCTGCTGTTCAGTGCTGACCACCTCCTaGTGCAGTTTCTCAACCACCCCAGTGAGCTGCTCTACTTCTTCC +
Preference number: 5 (lower is better)
Translates to: RVLAPSLCCSVLTTS*CSFSTTPVSCSTSS
Trigger: GGAAGAAGTAGAGCAGCTCACTGGGGTGGTTGAGAAACTGCAGCAGGAGGTGGTCAGCACTGAACAGCAGAGAGAGGGTGCCAGGACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 90 bp TCCACAAGGCCTCTGCTTCCCGGTTTCTCCTCCGGCTCCAGCTCCTaGTTTTGGAATTCCTGCATAAGCCCTTGCAGTCGCTTTCCCTCC +
Preference number: 5 (lower is better)
Translates to: STRPLLPGFSSGSSS*FWNSCISPCSRFPS
Trigger: GGAGGGAAAGCGACTGCAAGGGCTTATGCAGGAATTCCAAAAGCAGGAGCTGGAGCCGGAGGAGAAACCGGGAAGCAGAGGCCTTGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000176863.2
CDS CCA 90 bp AGGCCTCTGCTTCCCGGTTTCTCCTCCGGCTCCAGCTCCTGCTTTTaGAATTCCTGCATAAGCCCTTGCAGTCGCTTTCCCTCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: RPLLPGFSSGSSSCF*NSCISPCSRFPSRS
Trigger: AGACCTGGAGGGAAAGCGACTGCAAGGGCTTATGCAGGAATTCCAAAAGCAGGAGCTGGAGCCGGAGGAGAAACCGGGAAGCAGAGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000176863.2
CDS TCA 90 bp CTACACGGCTCTCCACCTCTGCTAGCCTCAGGGTCACTGTGGGGATaGGTGACTCCGTGCTGGCTCCAGTCAGACCATTTGCATTCTGTA +
Preference number: 5 (lower is better)
Translates to: LHGSPPLLASGSLWG*VTPCWLQSDHLHSV
Trigger: TACAGAATGCAAATGGTCTGACTGGAGCCAGCACGGAGTCACTCATCCCCACAGTGACCCTGAGGCTAGCAGAGGTGGAGAGCCGTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 90 bp CAGCCACGATCTCAGCTTTTAGGTCTTCCACTGTGCTCAGGGACTTaGGCGCCTCACTCAGCCTGTTCTCTTGCTCTGCGATTGTCTGCC +
Preference number: 5 (lower is better)
Translates to: QPRSQLLGLPLCSGT*APHSACSLALRLSA
Trigger: GGCAGACAATCGCAGAGCAAGAGAACAGGCTGAGTGAGGCGCGCAAGTCCCTGAGCACAGTGGAAGACCTAAAAGCTGAGATCGTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000143365.8
CDS GCA 90 bp TGGATTCGGAGGCAGCCACGATCTCAGCTTTTAGGTCTTCCACTGTaGTCAGGGACTTGCGCGCCTCACTCAGCCTGTTCTCTTGCTCTG +
Preference number: 5 (lower is better)
Translates to: WIRRQPRSQLLGLPL*SGTCAPHSACSLAL
Trigger: CAGAGCAAGAGAACAGGCTGAGTGAGGCGCGCAAGTCCCTGAGCACAGTGGAAGACCTAAAAGCTGAGATCGTGGCTGCCTCCGAATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000143365.8
CDS GCA 90 bp AGCCTCAAGTCTCTGCTGCAAAGACTCAGTTTCTGCTCTGTGGTTTaGTTCGGTTTCCGTGAGCTGCAGCTGTCCGGCAGCCACAGGGCT +
Preference number: 5 (lower is better)
Translates to: SLKSLLQRLSFCSVV*FGFRELQLSGSHRA
Trigger: AGCCCTGTGGCTGCCGGACAGCTGCAGCTCACGGAAACCGAAGCAAACCACAGAGCAGAAACTGAGTCTTTGCAGCAGAGACTTGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000133952.2
CDS GCA 90 bp GTCCTGGCACCCTCTCTCTGCTGTTCAGTGCTGACCACCTCCTGCTaGAGTTTCTCAACCACCCCAGTGAGCTGCTCTACTTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: VLAPSLCCSVLTTSC*SFSTTPVSCSTSSS
Trigger: AGAGGAAGAAGTAGAGCAGCTCACTGGGGTGGTTGAGAAACTGCAGCAGGAGGTGGTCAGCACTGAACAGCAGAGAGAGGGTGCCAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 90 bp CGGCACATACTCCTGAGCTGCCTCCATTTGGACCTGACTGACCAGTaGAGCGGCGAACTTCTCAAGGCTTCTCTGCAGGTCTGTGAGCTT +
Preference number: 5 (lower is better)
Translates to: RHILLSCLHLDLTDQ*SGELLKASLQVCEL
Trigger: AAGCTCACAGACCTGCAGAGAAGCCTTGAGAAGTTCGCCGCTGCACTGGTCAGTCAGGTCCAAATGGAGGCAGCTCAGGAGTATGTGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 90 bp TCCTGCAGCTCGGCTGCTCTGTCTCTCAGGCTGCTGAGTTCCAGTTaGATTTCCAGCGACTGCTTCTGCTGCATACTGCAGTCCAGGAGT +
Preference number: 5 (lower is better)
Translates to: SCSSAALSLRLLSSS*ISSDCFCCILQSRS
Trigger: ACTCCTGGACTGCAGTATGCAGCAGAAGCAGTCGCTGGAAATGCAACTGGAACTCAGCAGCCTGAGAGACAGAGCAGCCGAGCTGCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 90 bp TCCTGGAGCTGGCGCTGCAGCTCTTCCACTTTGGACTGCAGCTCCTaGATTTTCTTTTGGCCCTGGGTGTTTGCCTCCTGTTCTGTCTGC +
Preference number: 5 (lower is better)
Translates to: SWSWRCSSSTLDCSS*IFFWPWVFASCSVC
Trigger: GCAGACAGAACAGGAGGCAAACACCCAGGGCCAAAAGAAAATGCAGGAGCTGCAGTCCAAAGTGGAAGAGCTGCAGCGCCAGCTCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000176863.2
CDS TCA 90 bp GCGGATGCGTCTGCTTCTGACCTCCAAAGCAGGCTGCTAGCTGTCTaGCCTTTACTAGATCGGTCCAGAATCCCAAGAACATGGCGGCCA +
Preference number: 5 (lower is better)
Translates to: ADASASDLQSRLLAV*PLLDRSRIPRTWRP
Trigger: TGGCCGCCATGTTCTTGGGATTCTGGACCGATCTAGTAAAGGTCAGACAGCTAGCAGCCTGCTTTGGAGGTCAGAAGCAGACGCATCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 90 bp AACTCAGCTGTTCCTGCAGCTCGGCTGCTCTGTCTCTCAGGCTGCTaGGTTCCAGTTGCATTTCCAGCGACTGCTTCTGCTGCATACTGC +
Preference number: 5 (lower is better)
Translates to: NSAVPAARLLCLSGC*VPVAFPATASAAYC
Trigger: GCAGTATGCAGCAGAAGCAGTCGCTGGAAATGCAACTGGAACTCAGCAGCCTGAGAGACAGAGCAGCCGAGCTGCAGGAACAGCTGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 90 bp GACCGACGGCAGCATGTGCATACCTTGGCTGAACCGGAGCCTCACTaGCAGCCTCAAGTCTCTGCTGCAAAGACTCAGTTTCTGCTCTGT +
Preference number: 5 (lower is better)
Translates to: DRRQHVHTLAEPEPH*QPQVSAAKTQFLLC
Trigger: ACAGAGCAGAAACTGAGTCTTTGCAGCAGAGACTTGAGGCTGTCAGTGAGGCTCCGGTTCAGCCAAGGTATGCACATGCTGCCGTCGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133952.2
CDS GCA 90 bp AGCTGCAGCTGTCCGGCAGCCACAGGGCTCTGTAACTCTTGGACTTaGCTCTCACATTCTCTGCTTTTCTCACTCGCAGGCAGAGAAGAC +
Preference number: 5 (lower is better)
Translates to: SCSCPAATGLCNSWT*LSHSLLFSLAGRED
Trigger: GTCTTCTCTGCCTGCGAGTGAGAAAAGCAGAGAATGTGAGAGGCAAGTCCAAGAGTTACAGAGCCCTGTGGCTGCCGGACAGCTGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000133952.2
CDS GCA 90 bp AGCCTCACTGACAGCCTCAAGTCTCTGCTGCAAAGACTCAGTTTCTaGTCTGTGGTTTGCTTCGGTTTCCGTGAGCTGCAGCTGTCCGGC +
Preference number: 5 (lower is better)
Translates to: SLTDSLKSLLQRLSF*SVVCFGFRELQLSG
Trigger: GCCGGACAGCTGCAGCTCACGGAAACCGAAGCAAACCACAGAGCAGAAACTGAGTCTTTGCAGCAGAGACTTGAGGCTGTCAGTGAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000133952.2
CDS GCA 90 bp TTAAAGCTCTCCTCATCTTCTGGGAGGGTCCTGGCACCCTCTCTCTaGTGTTCAGTGCTGACCACCTCCTGCTGCAGTTTCTCAACCACC +
Preference number: 5 (lower is better)
Translates to: LKLSSSSGRVLAPSL*CSVLTTSCCSFSTT
Trigger: GGTGGTTGAGAAACTGCAGCAGGAGGTGGTCAGCACTGAACAGCAGAGAGAGGGTGCCAGGACCCTCCCAGAAGATGAGGAGAGCTTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 90 bp CGCAACCACCATCTTTTCCGAACTCAGCTGTTCCTGCAGCTCGGCTaGTCTGTCTCTCAGGCTGCTGAGTTCCAGTTGCATTTCCAGCGA +
Preference number: 5 (lower is better)
Translates to: RNHHLFRTQLFLQLG*SVSQAAEFQLHFQR
Trigger: TCGCTGGAAATGCAACTGGAACTCAGCAGCCTGAGAGACAGAGCAGCCGAGCTGCAGGAACAGCTGAGTTCGGAAAAGATGGTGGTTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 90 bp TCCTCCGGCTCCAGCTCCTGCTTTTGGAATTCCTGCATAAGCCCTTaGAGTCGCTTTCCCTCCAGGTCTAGCTTGTACACCTGCTGCCTT +
Preference number: 5 (lower is better)
Translates to: SSGSSSCFWNSCISP*SRFPSRSSLYTCCL
Trigger: AAGGCAGCAGGTGTACAAGCTAGACCTGGAGGGAAAGCGACTGCAAGGGCTTATGCAGGAATTCCAAAAGCAGGAGCTGGAGCCGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000176863.2
CDS GCA 90 bp CTTCCCGGTTTCTCCTCCGGCTCCAGCTCCTGCTTTTGGAATTCCTaGATAAGCCCTTGCAGTCGCTTTCCCTCCAGGTCTAGCTTGTAC +
Preference number: 5 (lower is better)
Translates to: LPGFSSGSSSCFWNS*ISPCSRFPSRSSLY
Trigger: GTACAAGCTAGACCTGGAGGGAAAGCGACTGCAAGGGCTTATGCAGGAATTCCAAAAGCAGGAGCTGGAGCCGGAGGAGAAACCGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000176863.2
CDS CCA 90 bp CTGACAGCCTCAAGTCTCTGCTGCAAAGACTCAGTTTCTGCTCTGTaGTTTGCTTCGGTTTCCGTGAGCTGCAGCTGTCCGGCAGCCACA +
Preference number: 5 (lower is better)
Translates to: LTASSLCCKDSVSAL*FASVSVSCSCPAAT
Trigger: TGTGGCTGCCGGACAGCTGCAGCTCACGGAAACCGAAGCAAACCACAGAGCAGAAACTGAGTCTTTGCAGCAGAGACTTGAGGCTGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000133952.2
CDS CCA 90 bp CTCTGTGAGCCCAGAGCAGCCACCTACTTCAACAGAAGGTGGCTCTaGTATGGGGGCCTCTCTGCTTTCCTGTTCTCCAGTCCTCTTTTC +
Preference number: 5 (lower is better)
Translates to: LCEPRAATYFNRRWL*YGGLSAFLFSSPLF
Trigger: GAAAAGAGGACTGGAGAACAGGAAAGCAGAGAGGCCCCCATACCAGAGCCACCTTCTGTTGAAGTAGGTGGCTGCTCTGGGCTCACAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 90 bp TCTCGCACTCGGCACTCCAGCTTCTCAATCTCCTCATTCCTCTCCTaGATGTCTCGCTGCAGTTGCTCCTTGGATAGCAGCAGCTCACTG +
Preference number: 5 (lower is better)
Translates to: SRTRHSSFSISSFLS*MSRCSCSLDSSSSL
Trigger: CAGTGAGCTGCTGCTATCCAAGGAGCAACTGCAGCGAGACATTCAGGAGAGGAATGAGGAGATTGAGAAGCTGGAGTGCCGAGTGCGAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CCA 90 bp TCTAGGGATAATTCTGGGTCTGCTTCTACAGCTCCAGACCTTTTCTaGTCCTCTACCTTGGGGAAGGGCTCTGCACTAGCCAGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: SRDNSGSASTAPDLF*SSTLGKGSALASRA
Trigger: AGCCCTGCTGGCTAGTGCAGAGCCCTTCCCCAAGGTAGAGGACCAGAAAAGGTCTGGAGCTGTAGAAGCAGACCCAGAATTATCCCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 90 bp TGCACAATCTTCTGGTGCACAAGTCGTGGCGGATGCGTCTGCTTCTaGCCTCCAAAGCAGGCTGCTAGCTGTCTGACCTTTACTAGATCG +
Preference number: 5 (lower is better)
Translates to: CTIFWCTSRGGCVCF*PPKQAASCLTFTRS
Trigger: CGATCTAGTAAAGGTCAGACAGCTAGCAGCCTGCTTTGGAGGTCAGAAGCAGACGCATCCGCCACGACTTGTGCACCAGAAGATTGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 90 bp AACCACTCCTCACGAGCCGCTGTGACAGCTCTGCTCCTTCCTCTGTaGCTTTGGACCAAATGCTGTCATGTGTTGCTATGGCAGTTCCAG +
Preference number: 5 (lower is better)
Translates to: NHSSRAAVTALLLPL*LWTKCCHVLLWQFQ
Trigger: CTGGAACTGCCATAGCAACACATGACAGCATTTGGTCCAAAGTCACAGAGGAAGGAGCAGAGCTGTCACAGCGGCTCGTGAGGAGTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 90 bp AGGATCTATTACAGGCCCAGCAAAACCACTCCTCACGAGCCGCTGTaGCAGCTCTGCTCCTTCCTCTGTGACTTTGGACCAAATGCTGTC +
Preference number: 5 (lower is better)
Translates to: RIYYRPSKTTPHEPL*QLCSFLCDFGPNAV
Trigger: GACAGCATTTGGTCCAAAGTCACAGAGGAAGGAGCAGAGCTGTCACAGCGGCTCGTGAGGAGTGGTTTTGCTGGGCCTGTAATAGATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 90 bp GTTCCTCAACTTCCTGATCGTCATGTCCATCCTGTGTTTGCGTACTaGTGTGGCGCAGCTCACAACACAGCTCCTTTCTTCCAGCTAGGG +
Preference number: 5 (lower is better)
Translates to: VPQLPDRHVHPVFAY*CGAAHNTAPFFQLG
Trigger: CCCTAGCTGGAAGAAAGGAGCTGTGTTGTGAGCTGCGCCACAGCAGTACGCAAACACAGGATGGACATGACGATCAGGAAGTTGAGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 90 bp AGCTGCCGTTCCTCTTCCACCCGGCGTTGGTCTGACTCTAGCTCCTaGAGTCTGTTGTTCATACATAACACCTCCTGCTCAAGATGCTCT +
Preference number: 5 (lower is better)
Translates to: SCRSSSTRRWSDSSS*SLLFIHNTSCSRCS
Trigger: AGAGCATCTTGAGCAGGAGGTGTTATGTATGAACAACAGACTGCAGGAGCTAGAGTCAGACCAACGCCGGGTGGAAGAGGAACGGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000238634.2
CDS GCA 90 bp CTTTTTAGTTCCGCAACCACCATCTTTTCCGAACTCAGCTGTTCCTaGAGCTCGGCTGCTCTGTCTCTCAGGCTGCTGAGTTCCAGTTGC +
Preference number: 5 (lower is better)
Translates to: LFSSATTIFSELSCS*SSAALSLRLLSSSC
Trigger: GCAACTGGAACTCAGCAGCCTGAGAGACAGAGCAGCCGAGCTGCAGGAACAGCTGAGTTCGGAAAAGATGGTGGTTGCGGAACTAAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CCA 90 bp TCTGCAGTGGTAGAAATTTCACTTTCAGGTTCAGCAGAGAAGACCTaGCCGTGCTTTCTCTCTGGCCCGGAGCAATCAGGATTCCCGGCT +
Preference number: 5 (lower is better)
Translates to: SAVVEISLSGSAEKT*PCFLSGPEQSGFPA
Trigger: AGCCGGGAATCCTGATTGCTCCGGGCCAGAGAGAAAGCACGGCCAGGTCTTCTCTGCTGAACCTGAAAGTGAAATTTCTACCACTGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000143365.8
CDS CCA 90 bp CCATACATCTCATCCAGCTCTGCTTGGAGATGGCTTAATTTCCGTTaGGTTTCCTGTTCCACCCTTCGCACGGCGCTAGTTTCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: PYISSSSAWRWLNFR*VSCSTLRTALVSSQ
Trigger: CTGGCTGGAAACTAGCGCCGTGCGAAGGGTGGAACAGGAAACCCAACGGAAATTAAGCCATCTCCAAGCAGAGCTGGATGAGATGTATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000143365.8
CDS CCA 90 bp AGACGCGTAAGGGAGGTCTGTTTTTCTAGAGGTTTGGTCACATCCTaGGCAGGGGCATCTTCTGGCTGCAGATTGTCACTGCCTAGCTCA +
Preference number: 5 (lower is better)
Translates to: RRVREVCFSRGLVTS*AGASSGCRLSLPSS
Trigger: TGAGCTAGGCAGTGACAATCTGCAGCCAGAAGATGCCCCTGCCCAGGATGTGACCAAACCTCTAGAAAAACAGACCTCCCTTACGCGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 90 bp CTCCCTCTCCTTTTCCATGTGTGCACGAACCTGATCCGCATGAGTTaGGTAAACCACAAAAAGGCATATGCGCTGGGCCTCCATCTGCAG +
Preference number: 5 (lower is better)
Translates to: LPLLFHVCTNLIRMS*VNHKKAYALGLHLQ
Trigger: CTGCAGATGGAGGCCCAGCGCATATGCCTTTTTGTGGTTTACTCAACTCATGCGGATCAGGTTCGTGCACACATGGAAAAGGAGAGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 90 bp GCGGCGAACTTCTCAAGGCTTCTCTGCAGGTCTGTGAGCTTCTTCTaGAGCCTGTCTGTCTCAGACTGGGCTTGCTCTTGTATGGTTTCT +
Preference number: 5 (lower is better)
Translates to: AANFSRLLCRSVSFF*SLSVSDWACSCMVS
Trigger: AGAAACCATACAAGAGCAAGCCCAGTCTGAGACAGACAGGCTTCAGAAGAAGCTCACAGACCTGCAGAGAAGCCTTGAGAAGTTCGCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 90 bp GTGGTAGAAATTTCACTTTCAGGTTCAGCAGAGAAGACCTGGCCGTaGTTTCTCTCTGGCCCGGAGCAATCAGGATTCCCGGCTAAGTCT +
Preference number: 5 (lower is better)
Translates to: VVEISLSGSAEKTWP*FLSGPEQSGFPAKS
Trigger: AGACTTAGCCGGGAATCCTGATTGCTCCGGGCCAGAGAGAAAGCACGGCCAGGTCTTCTCTGCTGAACCTGAAAGTGAAATTTCTACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000143365.8
CDS GCA 90 bp CACGAACCTGATCCGCATGAGTTGAGTAAACCACAAAAAGGCATATaGGCTGGGCCTCCATCTGCAGCCTTAGATCATCCTGCTCGGCTT +
Preference number: 5 (lower is better)
Translates to: HEPDPHELSKPQKGI*AGPPSAALDHPARL
Trigger: AAGCCGAGCAGGATGATCTAAGGCTGCAGATGGAGGCCCAGCGCATATGCCTTTTTGTGGTTTACTCAACTCATGCGGATCAGGTTCGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 90 bp CTCAGGCTGCTGAGTTCCAGTTGCATTTCCAGCGACTGCTTCTGCTaGATACTGCAGTCCAGGAGTTCTTGGCTGCTTTTCTCAGTTCCT +
Preference number: 5 (lower is better)
Translates to: LRLLSSSCISSDCFC*ILQSRSSWLLFSVP
Trigger: AGGAACTGAGAAAAGCAGCCAAGAACTCCTGGACTGCAGTATGCAGCAGAAGCAGTCGCTGGAAATGCAACTGGAACTCAGCAGCCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 90 bp CACTTTGGACTGCAGCTCCTGCATTTTCTTTTGGCCCTGGGTGTTTaGCTCCTGTTCTGTCTGCAGTGTCTTCTGATGAACCTGCCTGTC +
Preference number: 5 (lower is better)
Translates to: HFGLQLLHFLLALGV*LLFCLQCLLMNLPV
Trigger: GACAGGCAGGTTCATCAGAAGACACTGCAGACAGAACAGGAGGCAAACACCCAGGGCCAAAAGAAAATGCAGGAGCTGCAGTCCAAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000176863.2
CDS CCA 90 bp TCGCTACTTCTTTTTGCCACCTCGAGTCTGCCGACTTGCTTGTGCTaGGATCTACGGCAATGGATCTCTCCTCTTGTTCCGAAGGACTGT +
Preference number: 5 (lower is better)
Translates to: SLLLFATSSLPTCLC*DLRQWISPLVPKDC
Trigger: ACAGTCCTTCGGAACAAGAGGAGAGATCCATTGCCGTAGATCCCAGCACAAGCAAGTCGGCAGACTCGAGGTGGCAAAAAGAAGTAGCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGCCCATCCCGAGAGCTTaGTTCTCCTCCCTCTTCCGG +
Preference number: 5 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLPIPRA*FSSLFR
Trigger: CCGGAAGAGGGAGGAGAACAAAGCTCTCGGGATGGG...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 90 bp TTCAGCCCTTCGGTCCCAAAGCTGGCCCTCATCTCTTCCAACTCCTaGGTCAACTCTTCAATATCATGCTGCTTCTCGGCCAACTCCTTT +
Preference number: 5 (lower is better)
Translates to: FSPSVPKLALISSNS*VNSSISCCFSANSF
Trigger: AAAGGAGTTGGCCGAGAAGCAGCATGATATTGAAGAGTTGACTCAGGAGTTGGAAGAGATGAGGGCCAGCTTTGGGACCGAAGGGCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000143365.8
CDS TCA 90 bp ACACCACAGAATCAATGGACAAGCTTGGCTGAACCGGAGCCTCACTaGCAGCCTCAAGTCTCTGCTGCAAAGACTCAGTTTCTGCTCTGT +
Preference number: 5 (lower is better)
Translates to: TPQNQWTSLAEPEPH*QPQVSAAKTQFLLC
Trigger: ACAGAGCAGAAACTGAGTCTTTGCAGCAGAGACTTGAGGCTGTCAGTGAGGCTCCGGTTCAGCCAAGCTTGTCCATTGATTCTGTGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 90 bp GCACCAGATCCTTTAAACACCACAGAATCAATGGACAAGCTTGGCTaGACCGGAGCCTCACTGACAGCCTCAAGTCTCTGCTGCAAAGAC +
Preference number: 5 (lower is better)
Translates to: APDPLNTTESMDKLG*TGASLTASSLCCKD
Trigger: GTCTTTGCAGCAGAGACTTGAGGCTGTCAGTGAGGCTCCGGTTCAGCCAAGCTTGTCCATTGATTCTGTGGTGTTTAAAGGATCTGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 90 bp ATGATGCCGTCTCGCTGTTTAATGGCGGCTTCAAATTCTTGTAACTaGTTCAGCCCTTCGGTCCCAAAGCTGGCCCTCATCTCTTCCAAC +
Preference number: 5 (lower is better)
Translates to: MMPSRCLMAASNSCN*FSPSVPKLALISSN
Trigger: GTTGGAAGAGATGAGGGCCAGCTTTGGGACCGAAGGGCTGAAGCAGTTACAAGAATTTGAAGCCGCCATTAAACAGCGAGACGGCATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000143365.8
CDS GCA 90 bp TGGGCAGGGGCATCTTCTGGCTGCAGATTGTCACTGCCTAGCTCATaGACAGTCATGTGGACACTTTCCTTAGGTAGACTTGGAAGTTCT +
Preference number: 5 (lower is better)
Translates to: WAGASSGCRLSLPSS*TVMWTLSLGRLGSS
Trigger: AGAACTTCCAAGTCTACCTAAGGAAAGTGTCCACATGACTGTGCATGAGCTAGGCAGTGACAATCTGCAGCCAGAAGATGCCCCTGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 90 bp TTTTCTAGAGGTTTGGTCACATCCTGGGCAGGGGCATCTTCTGGCTaGAGATTGTCACTGCCTAGCTCATGCACAGTCATGTGGACACTT +
Preference number: 5 (lower is better)
Translates to: FSRGLVTSWAGASSG*RLSLPSSCTVMWTL
Trigger: AAGTGTCCACATGACTGTGCATGAGCTAGGCAGTGACAATCTGCAGCCAGAAGATGCCCCTGCCCAGGATGTGACCAAACCTCTAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CCA 90 bp TGCACTATTTGCTTCCCATACATCTCATCCAGCTCTGCTTGGAGATaGCTTAATTTCCGTTGGGTTTCCTGTTCCACCCTTCGCACGGCG +
Preference number: 5 (lower is better)
Translates to: CTICFPYISSSSAWR*LNFRWVSCSTLRTA
Trigger: CGCCGTGCGAAGGGTGGAACAGGAAACCCAACGGAAATTAAGCCATCTCCAAGCAGAGCTGGATGAGATGTATGGGAAGCAAATAGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000143365.8
CDS CCA 90 bp GGTAAGCTTGTCTCTCTTTCAGCCAAGATTCCGAAAGCTGCTGAATaGAACGGTCCTCTCCATCATCACAGAGGGGACTGGAGAGAGAGA +
Preference number: 5 (lower is better)
Translates to: GKLVSLSAKIPKAAE*NGPLHHHRGDWRER
Trigger: TCTCTCTCTCCAGTCCCCTCTGTGATGATGGAGAGGACCGTTCCATTCAGCAGCTTTCGGAATCTTGGCTGAAAGAGAGACAAGCTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAACTAGCCAGCAGGGCTaGCTCCAGCTCTCGCACTCG +
Preference number: 5 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTTSQQG*LQLSHS
Trigger: CGAGTGCGAGAGCTGGAGCAAGCCCTGCTGGCTAGT...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 90 bp GCCTCCATCTGCAGCCTTAGATCATCCTGCTCGGCTTTGAGGGCATaGAGCTCTTGCTGGAGTTTTTCACTTTCACATGGTTCAACTGTC +
Preference number: 5 (lower is better)
Translates to: ASICSLRSSCSALRA*SSCWSFSLSHGSTV
Trigger: GACAGTTGAACCATGTGAAAGTGAAAAACTCCAGCAAGAGCTTCATGCCCTCAAAGCCGAGCAGGATGATCTAAGGCTGCAGATGGAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 90 bp GGACTCCTCCTGAAGGCGCTCTCGCAGTTCTTCCAGGCAATGAAGTaGCTCTGTTGCCTCTTGTTTTTGTCTAAAGGACTCACGCATCAA +
Preference number: 5 (lower is better)
Translates to: GLLLKALSQFFQAMK*LCCLLFLSKGLTHQ
Trigger: TTGATGCGTGAGTCCTTTAGACAAAAACAAGAGGCAACAGAGTCACTTCATTGCCTGGAAGAACTGCGAGAGCGCCTTCAGGAGGAGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000238634.2
CDS TCA 90 bp ACTTGTTGCTCTAAAACCAGCTTTTCAGCAGTCACCTTGTCCAGCTaGTGTTTAAAGCTCTCCTCATCTTCTGGGAGGGTCCTGGCACCC +
Preference number: 5 (lower is better)
Translates to: TCCSKTSFSAVTLSS*CLKLSSSSGRVLAP
Trigger: GGGTGCCAGGACCCTCCCAGAAGATGAGGAGAGCTTTAAACATCAGCTGGACAAGGTGACTGCTGAAAAGCTGGTTTTAGAGCAACAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 90 bp TATGAAAACACGCTGACAGGCAAGCAGAAGTTCACCTCGCCAGTCTaGGAGGTGACACCTGTCATAGACCTCAGTTTCTCTTCGCACTTG +
Preference number: 5 (lower is better)
Translates to: YENTLTGKQKFTSPV*EVTPVIDLSFSSHL
Trigger: CAAGTGCGAAGAGAAACTGAGGTCTATGACAGGTGTCACCTCTCAGACTGGCGAGGTGAACTTCTGCTTGCCTGTCAGCGTGTTTTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 90 bp GCTGTTTCAAACTGCAGCCTGCTGCAGGCTTTCTGGGCTACATGCTaGAGTTTTGAAGCCACATGCTGGAGTGTCTGTCTGATCATTTCC +
Preference number: 5 (lower is better)
Translates to: AVSNCSLLQAFWATC*SFEATCWSVCLIIS
Trigger: GGAAATGATCAGACAGACACTCCAGCATGTGGCTTCAAAACTTCAGCATGTAGCCCAGAAAGCCTGCAGCAGGCTGCAGTTTGAAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 90 bp CTCTGCTCCTTCCTCTGTGACTTTGGACCAAATGCTGTCATGTGTTaGTATGGCAGTTCCAGGATAGGAGGGTATGGACTCATCCATAGC +
Preference number: 5 (lower is better)
Translates to: LCSFLCDFGPNAVMC*YGSSRIGGYGLIHS
Trigger: GCTATGGATGAGTCCATACCCTCCTATCCTGGAACTGCCATAGCAACACATGACAGCATTTGGTCCAAAGTCACAGAGGAAGGAGCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 90 bp TTCACGACACTGGGTAAGCTCAACGTCCTTGGCGCCAACAGAGCTTaGCAGGGACTCTATTTCTTGTGTTCTAGAAGCTTCAGGGCTTTT +
Preference number: 5 (lower is better)
Translates to: FTTLGKLNVLGANRA*QGLYFLCSRSFRAF
Trigger: AAAAGCCCTGAAGCTTCTAGAACACAAGAAATAGAGTCCCTGGCAAGCTCTGTTGGCGCCAAGGACGTTGAGCTTACCCAGTGTCGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CCA 90 bp GACGTCCTCTTCTTCTTCTGTTTCTTCGGAATGTCCCCATCATATTaGGCTTTTCTTTGTCGAAACCGAGCAAGCTTCGCCTTGCCGGCT +
Preference number: 5 (lower is better)
Translates to: DVLFFFCFFGMSPSY*AFLCRNRASFALPA
Trigger: AGCCGGCAAGGCGAAGCTTGCTCGGTTTCGACAAAGAAAAGCCCAATATGATGGGGACATTCCGAAGAAACAGAAGAAGAAGAGGACGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000143365.8
CDS CCA 90 bp TCTGCCAATTCAGGAATGGAGGATCCCTCTTTGCATCTCAGACACTaGGTCATCTCCTTCAGGGTCTCGCATTCCTTAGTCAGTAACTGG +
Preference number: 5 (lower is better)
Translates to: SANSGMEDPSLHLRH*VISFRVSHSLVSNW
Trigger: CCAGTTACTGACTAAGGAATGCGAGACCCTGAAGGAGATGACCCAGTGTCTGAGATGCAAAGAGGGATCCTCCATTCCTGAATTGGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGTTCAACCTCTCTGGCTaGGTGCTCACTCACAGGCTG +
Preference number: 5 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLFNLSG*VLTHRL
Trigger: CAGCCTGTGAGTGAGCACCAAGCCAGAGAGGTTGAA...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGACGCTGCAGTTGCTCCTaGGATAGCAGCAGCTCACTG +
Preference number: 5 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRRCSCS*DSSSSL
Trigger: CAGTGAGCTGCTGCTATCCAAGGAGCAACTGCAGCG...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 90 bp GGTCTGACTGGACTGAGCTCCTTGCTCAGAGGAGGAGTCATCAAGTaGAAATTCTTCTTCCTCCGAGCTACATTCATCTGCAGTGGTAGA +
Preference number: 5 (lower is better)
Translates to: GLTGLSSLLRGGVIK*KFFFLRATFICSGR
Trigger: TCTACCACTGCAGATGAATGTAGCTCGGAGGAAGAAGAATTTTCACTTGATGACTCCTCCTCTGAGCAAGGAGCTCAGTCCAGTCAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 90 bp GGTCCTCCTCCTTTTTCTGATAATCTTGCAGCTGTTGCTGTTGAGTaGAGATCTGTCGTTTGGCCTGCAGTAAATCTGTCGCAGTTCGGC +
Preference number: 5 (lower is better)
Translates to: GPPPFSDNLAAVAVE*RSVVWPAVNLSQFG
Trigger: GCCGAACTGCGACAGATTTACTGCAGGCCAAACGACAGATCTTCACTCAACAGCAACAGCTGCAAGATTATCAGAAAAAGGAGGAGGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000143365.8
CDS TCA 90 bp CTTCTCTCCAATGTCTTGTCTTTTAACGTCTGTTCCTCAACTTCCTaGTCGTCATGTCCATCCTGTGTTTGCGTACTGCTGTGGCGCAGC +
Preference number: 5 (lower is better)
Translates to: LLSNVLSFNVCSSTS*SSCPSCVCVLLWRS
Trigger: GCTGCGCCACAGCAGTACGCAAACACAGGATGGACATGACGATCAGGAAGTTGAGGAACAGACGTTAAAAGACAAGACATTGGAGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 90 bp AAACTGCAGCCTGCTGCAGGCTTTCTGGGCTACATGCTGAAGTTTTaGAGCCACATGCTGGAGTGTCTGTCTGATCATTTCCAAGTCATG +
Preference number: 5 (lower is better)
Translates to: KLQPAAGFLGYMLKF*SHMLECLSDHFQVM
Trigger: CATGACTTGGAAATGATCAGACAGACACTCCAGCATGTGGCTTCAAAACTTCAGCATGTAGCCCAGAAAGCCTGCAGCAGGCTGCAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 90 bp ATCACCGGCTGTTTCAAACTGCTGCAGGCTTTCTGGGCTACATGCTaGAGTTTTGAAGCCACATGCTGGAGTGTCTGTCTGATCATTTCC +
Preference number: 5 (lower is better)
Translates to: ITGCFKLLQAFWATC*SFEATCWSVCLIIS
Trigger: GGAAATGATCAGACAGACACTCCAGCATGTGGCTTCAAAACTTCAGCATGTAGCCCAGAAAGCCTGCAGCAGTTTGAAACAGCCGGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147629.2
CDS GCA 90 bp AGCTCTTCCTCCAGCGCTCTCAGCTTGCTCTCATATTCCAATGCCTaGTTGGTCTGTGTGGCCTCTAAATCATCTCTTATCTTGAGCAGA +
Preference number: 5 (lower is better)
Translates to: SSSSSALSLLSYSNA*LVCVASKSSLILSR
Trigger: TCTGCTCAAGATAAGAGATGATTTAGAGGCCACACAGACCAAGCAGGCATTGGAATATGAGAGCAAGCTGAGAGCGCTGGAGGAAGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 90 bp TCTGAAACCACGTGTTCAGTATCTATGGAGGATTTCTGGGCTAGCTaGTCGTTGAGTCTCTTGATTTCCTCTTGGAGCTGCTCCTGGTCT +
Preference number: 5 (lower is better)
Translates to: SETTCSVSMEDFWAS*SLSLLISSWSCSWS
Trigger: AGACCAGGAGCAGCTCCAAGAGGAAATCAAGAGACTCAACGAGCAGCTAGCCCAGAAATCCTCCATAGATACTGAACACGTGGTTTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 90 bp GATAAGCAACAGAATCTGCCAATTCAGGAATGGAGGATCCCTCTTTaGATCTCAGACACTGGGTCATCTCCTTCAGGGTCTCGCATTCCT +
Preference number: 5 (lower is better)
Translates to: DKQQNLPIQEWRIPL*ISDTGSSPSGSRIP
Trigger: AGGAATGCGAGACCCTGAAGGAGATGACCCAGTGTCTGAGATGCAAAGAGGGATCCTCCATTCCTGAATTGGCAGATTCTGTTGCTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 90 bp CCCTCGTGGTGTCCCGACCTGGCCTTTTCCTTTTCCAAAGCCCACTaGAGCTCTAATGAATTCTTCTGTTCCCTTGCTAATGTATCACTA +
Preference number: 5 (lower is better)
Translates to: PSWCPDLAFSFSKAH*SSNEFFCSLANVSL
Trigger: TAGTGATACATTAGCAAGGGAACAGAAGAATTCATTAGAGCTGCAGTGGGCTTTGGAAAAGGAAAAGGCCAGGTCGGGACACCACGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CCA 90 bp TTTTGTTCAGCAAACTCTAGTGCCACACCATCTGTCTGTTGTTCATaGATCTTGCCTAAGCGCGTCTGCAGTCCTGAGAGTTTGCGGCAT +
Preference number: 5 (lower is better)
Translates to: FCSANSSATPSVCCS*ILPKRVCSPESLRH
Trigger: ATGCCGCAAACTCTCAGGACTGCAGACGCGCTTAGGCAAGATCCATGAACAACAGACAGATGGTGTGGCACTAGAGTTTGCTGAACAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CCA 90 bp CAATCTCCTCATTCCTCTCCTGAATGTCTCGCTGCAGTTGCTCCTTaGATAGCAGCAGCTCACTGCACCTGTCTGTTTTCTCTTTCAAGT +
Preference number: 5 (lower is better)
Translates to: QSPHSSPECLAAVAP*IAAAHCTCLFSLSS
Trigger: ACTTGAAAGAGAAAACAGACAGGTGCAGTGAGCTGCTGCTATCCAAGGAGCAACTGCAGCGAGACATTCAGGAGAGGAATGAGGAGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CCA 90 bp AAGAACCCAATTTCTAGTCCGATCATCAGTGAAGTTCCAGGTGGCTaGCTCATTCAGATTCTGATCCACAAGGCCTCTGCTTCCCGGTTT +
Preference number: 5 (lower is better)
Translates to: KNPISSPIISEVPGG*LIQILIHKASASRF
Trigger: AAACCGGGAAGCAGAGGCCTTGTGGATCAGAATCTGAATGAGCCAGCCACCTGGAACTTCACTGATGATCGGACTAGAAATTGGGTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACACTGAGCTGCCTCCATTaGGACCTGACTGACCAGTGC +
Preference number: 5 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTLSCLH*DLTDQC
Trigger: GCACTGGTCAGTCAGGTCCAAATGGAGGCAGCTCAG...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACACCGCTGCTGCTCACCTaGTCTGTTCTCTCTGTGAGC +
Preference number: 5 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTPLLLT*SVLSVS
Trigger: GCTCACAGAGAGAACAGACAAGGTGAGCAGCAGCGG...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGATTCCTGCATAAGCCCTaGCAGTCGCTTTCCCTCCAG +
Preference number: 5 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRFLHKP*QSLSLQ
Trigger: CTGGAGGGAAAGCGACTGCAAGGGCTTATGCAGGAA...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACGCTAGTACTTGTCACTaGCTGCCACCGCCGCACCAA +
Preference number: 5 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYASTCH*LPPPHQ
Trigger: TTGGTGCGGCGGTGGCAGCAAGTGACAAGTACTAGC...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 90 bp GTGTCATCCTTCTCTCTCCTTGCTTGCTGCAAGTTAGCTGTGAGCTaGGTTATGATGCCGTCTCGCTGTTTAATGGCGGCTTCAAATTCT +
Preference number: 5 (lower is better)
Translates to: VSSFSLLACCKLAVS*VMMPSRCLMAASNS
Trigger: AGAATTTGAAGCCGCCATTAAACAGCGAGACGGCATCATAACTCAGCTCACAGCTAACTTGCAGCAAGCAAGGAGAGAGAAGGATGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000143365.8
CDS CCA 90 bp CTTTCTCTCTCTGAAACCACGTGTTCAGTATCTATGGAGGATTTCTaGGCTAGCTGCTCGTTGAGTCTCTTGATTTCCTCTTGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: LSLSETTCSVSMEDF*ASCSLSLLISSWSC
Trigger: GCAGCTCCAAGAGGAAATCAAGAGACTCAACGAGCAGCTAGCCCAGAAATCCTCCATAGATACTGAACACGTGGTTTCAGAGAGAGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CCA 90 bp TCTTCTGGCTGCAGATTGTCACTGCCTAGCTCATGCACAGTCATGTaGACACTTTCCTTAGGTAGACTTGGAAGTTCTTCATTGCTGGCA +
Preference number: 5 (lower is better)
Translates to: SSGCRLSLPSSCTVM*TLSLGRLGSSSLLA
Trigger: TGCCAGCAATGAAGAACTTCCAAGTCTACCTAAGGAAAGTGTCCACATGACTGTGCATGAGCTAGGCAGTGACAATCTGCAGCCAGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CCA 90 bp TCTTGGTTCTCCATAGAGCTGCAGCCCACCAGGAGAATGATAGAATaGATCAGTCTTTTCAATGCCTGGACTCAGTCCAAATCCATCCCT +
Preference number: 5 (lower is better)
Translates to: SWFSIELQPTRRMIE*ISLFNAWTQSKSIP
Trigger: AGGGATGGATTTGGACTGAGTCCAGGCATTGAAAAGACTGATCCATTCTATCATTCTCCTGGTGGGCTGCAGCTCTATGGAGAACCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAACTGGACTGAGCTCCTaGCTCAGAGGAGGAGTCATC +
Preference number: 5 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTTGLSS*LRGGVI
Trigger: GATGACTCCTCCTCTGAGCAAGGAGCTCAGTCCAGT...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACCTCCAGCTCTGCTTCTaGGGATTCCGCCATTCTGTC +
Preference number: 5 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYLQLCF*GFRHSV
Trigger: GACAGAATGGCGGAATCCCAAGAAGCAGAGCTGGAG...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGTCTGCCGACTTGCTaGTGCTGGGATCTACGGCAA +
Preference number: 5 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTSLPTC*CWDLRQ
Trigger: TTGCCGTAGATCCCAGCACAAGCAAGTCGGCAGACT...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACATTGCCTCTCCATCTGTaGCATGTGGGCCTGCCTCAA +
Preference number: 5 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTLPLHL*HVGLPQ
Trigger: TTGAGGCAGGCCCACATGCAACAGATGGAGAGGCAA...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACCTCCTGGTCTTCCCGTaGCCTCTCCATCTGTTGCAT +
Preference number: 5 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYLLVFP*PLHLLH
Trigger: ATGCAACAGATGGAGAGGCAACGGGAAGACCAGGAG...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGTGGGCTAGCTGCTCGTaGAGTCTCTTGATTTCCTCT +
Preference number: 5 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLWASCS*SLLISS
Trigger: AGAGGAAATCAAGAGACTCAACGAGCAGCTAGCCCA...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAATGTCCATCCTGTGTTaGCGTACTGCTGTGGCGCAG +
Preference number: 5 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTMSILC*RTAVAQ
Trigger: CTGCGCCACAGCAGTACGCAAACACAGGATGGACAT...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACATTCTGGTCCTCTACCTaGGGGAAGGGCTCTGCACTA +
Preference number: 5 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTFWSST*GKGSAL
Trigger: TAGTGCAGAGCCCTTCCCCAAGGTAGAGGACCAGAA...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGAAACCGGCTGCTTTTCTaGGTGGAACGGCACATACTC +
Preference number: 5 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRNRLLF*VERHIL
Trigger: GAGTATGTGCCGTTCCACCAAGAAAAGCAGCCGGTT...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGAATGGAGGATCCCTCTTaGCATCTCAGACACTGGGTC +
Preference number: 5 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRMEDPS*HLRHWV
Trigger: GACCCAGTGTCTGAGATGCAAAGAGGGATCCTCCAT...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACATTTGGCCCTGGGTGTTaGCCTCCTGTTCTGTCTGCA +
Preference number: 5 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTFGPGC*PPVLSA
Trigger: TGCAGACAGAACAGGAGGCAAACACCCAGGGCCAAA...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGACTCCTGCATTTTCTTTaGGCCCTGGGTGTTTGCCTC +
Preference number: 5 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRLLHFL*ALGVCL
Trigger: GAGGCAAACACCCAGGGCCAAAAGAAAATGCAGGAG...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 90 bp TCCTTAACTTCCGACCTGAATGCTTCTAATTCCTTTAGGCGCTTATaGTGGGCCTTGAGTGTTGTTCCCAATTCCAGTTTTGCCTGTGCA +
Preference number: 5 (lower is better)
Translates to: SLTSDLNASNSFRRL*WALSVVPNSSFACA
Trigger: TGCACAGGCAAAACTGGAATTGGGAACAACACTCAAGGCCCAGCATAAGCGCCTAAAGGAATTAGAAGCATTCAGGTCGGAAGTTAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGGAGGGCATGAAGCTCTaGCTGGAGTTTTTCACTTTC +
Preference number: 5 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLEGMKL*LEFFTF
Trigger: GAAAGTGAAAAACTCCAGCAAGAGCTTCATGCCCTC...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGATGCTCGTTGAGTCTCTaGATTTCCTCTTGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRCSLSL*ISSWSC
Trigger: GCAGCTCCAAGAGGAAATCAAGAGACTCAACGAGCA...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGATGTTTTTCTAGAGGTTaGGTCACATCCTGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRCFSRG*VTSWAG
Trigger: CCCTGCCCAGGATGTGACCAAACCTCTAGAAAAACA...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACTGGCGCCAACAGAGCTaGCCAGGGACTCTATTTCTT +
Preference number: 5 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYWRQQS*PGTLFL
Trigger: AAGAAATAGAGTCCCTGGCAAGCTCTGTTGGCGCCA...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAGCAGTCCAGGAGTTCTaGGCTGCTTTTCTCAGTTCC +
Preference number: 5 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTAVQEF*AAFLSS
Trigger: GGAACTGAGAAAAGCAGCCAAGAACTCCTGGACTGC...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACACTCCAGCTCCTGCTTTaGGAATTCCTGCATAAGCCC +
Preference number: 5 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTLQLLL*EFLHKP
Trigger: GGGCTTATGCAGGAATTCCAAAAGCAGGAGCTGGAG...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGTGGTTGGTGATGGTCTaGGAATCTTTCAAGGCTAGG +
Preference number: 5 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLWLVMV*ESFKAR
Trigger: CCTAGCCTTGAAAGATTCCAAGACCATCACCAACCA...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 90 bp AGCTCTTGCTGGAGTTTTTCACTTTCACATGGTTCAACTGTCGCATaGGACGGTTTTTGTGCTCTTGTTGGCAAGAGCAACTGTTCTCTC +
Preference number: 5 (lower is better)
Translates to: SSCWSFSLSHGSTVA*DGFCALVGKSNCSL
Trigger: GAGAGAACAGTTGCTCTTGCCAACAAGAGCACAAAAACCGTCTCATGCGACAGTTGAACCATGTGAAAGTGAAAAACTCCAGCAAGAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 90 bp TTGGATAGCAGCAGCTCACTGCACCTGTCTGTTTTCTCTTTCAAGTaGTTAGTTAACTGTTCAACCTCTCTGGCTTGGTGCTCACTCACA +
Preference number: 5 (lower is better)
Translates to: LDSSSSLHLSVFSFK*LVNCSTSLAWCSLT
Trigger: TGTGAGTGAGCACCAAGCCAGAGAGGTTGAACAGTTAACTAATCACTTGAAAGAGAAAACAGACAGGTGCAGTGAGCTGCTGCTATCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CCA 90 bp TTAACTTCCGACCTGAATGCTTCTAATTCCTTTAGGCGCTTATGCTaGGCCTTGAGTGTTGTTCCCAATTCCAGTTTTGCCTGTGCAAGT +
Preference number: 5 (lower is better)
Translates to: LTSDLNASNSFRRLC*ALSVVPNSSFACAS
Trigger: ACTTGCACAGGCAAAACTGGAATTGGGAACAACACTCAAGGCCCAGCATAAGCGCCTAAAGGAATTAGAAGCATTCAGGTCGGAAGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGACTCTCTTCTCCTCTTaGAGAATGTTGTTCTCTGCG +
Preference number: 5 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLTLFSS*RMLFSA
Trigger: CGCAGAGAACAACATTCTCAAAGAGGAGAAGAGAGT...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGGTTTTTGTGCTCTTGTaGGCAAGAGCAACTGTTCTC +
Preference number: 5 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLVFVLL*ARATVL
Trigger: GAGAACAGTTGCTCTTGCCAACAAGAGCACAAAAAC...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGACGGTTTTTGTGCTCTaGTTGGCAAGAGCAACTGTT +
Preference number: 5 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLTVFVL*LARATV
Trigger: AACAGTTGCTCTTGCCAACAAGAGCACAAAAACCGT...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACCGCATGAGACGGTTTTaGTGCTCTTGTTGGCAAGAG +
Preference number: 5 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYRMRRF*CSCWQE
Trigger: CTCTTGCCAACAAGAGCACAAAAACCGTCTCATGCG...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGACCTGATCCGCATGAGTaGAGTAAACCACAAAAAGGC +
Preference number: 5 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRPDPHE*SKPQKG
Trigger: GCCTTTTTGTGGTTTACTCAACTCATGCGGATCAGG...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGGTCGATCTTTTTCTGTaGAGCGGAAATGAGCTCATC +
Preference number: 5 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLVDLFL*SGNELI
Trigger: GATGAGCTCATTTCCGCTCAACAGAAAAAGATCGAC...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACACTCAGACACTGCCTGTaGAAGTCGTTCAATGAGCAC +
Preference number: 5 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTLRHCL*KSFNEH
Trigger: GTGCTCATTGAACGACTTCAACAGGCAGTGTCTGAG...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACACTTCTCGGCCTTCTATaGCTGTATCAAATCCCTGGC +
Preference number: 5 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTLLGLL*LYQIPG
Trigger: GCCAGGGATTTGATACAGCAATAGAAGGCCGAGAAG...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 90 bp GGGCTACATGCTGAAGTTTTGAAGCCACATGCTGGAGTGTCTGTCTaGTCATTTCCAAGTCATGATTATGGTCAAGTTCTCCTCCGTTTA +
Preference number: 5 (lower is better)
Translates to: GLHAEVLKPHAGVSV*SFPSHDYGQVLLRL
Trigger: TAAACGGAGGAGAACTTGACCATAATCATGACTTGGAAATGATCAGACAGACACTCCAGCATGTGGCTTCAAAACTTCAGCATGTAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000176863.2
CDS GCA 90 bp CTTGTCTTCAAGGACTCTCTTCTCCTCTTTGAGAATGTTGTTCTCTaGGTCCAGCTGTGCACATTTTTCTTGAAGGTCATCTTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: LVFKDSLLLFENVVL*VQLCTFFLKVIFLL
Trigger: GAGAAGGAAGATGACCTTCAAGAAAAATGTGCACAGCTGGACGCAGAGAACAACATTCTCAAAGAGGAGAAGAGAGTCCTTGAAGACAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CCA 90 bp TGCTTTAAGGCTCTGACCTCTGCACTTAGAGAATTGATGGTACAATaGGTCTGCTTTAGTTGTTCAGAAAGGCCAGAGACTTTCTCTGAG +
Preference number: 5 (lower is better)
Translates to: CFKALTSALRELMVQ*VCFSCSERPETFSE
Trigger: CTCAGAGAAAGTCTCTGGCCTTTCTGAACAACTAAAGCAGACCCATTGTACCATCAATTCTCTAAGTGCAGAGGTCAGAGCCTTAAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGATGCTGGGTTATCAGGTaGTCTGTTTCACACTGCATA +
Preference number: 5 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRCWVIR*SVSHCI
Trigger: TATGCAGTGTGAAACAGACAACCTGATAACCCAGCA...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACTTGTCGCACAAGTTCTaGCCGCATATCTTCCAACTG +
Preference number: 5 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYLSHKF*PHIFQL
Trigger: CAGTTGGAAGATATGCGGCAAGAACTTGTGCGACAA...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAGCCTCAACATTTCTGTaGCCTGCTGGTGTTCTTCAT +
Preference number: 5 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTASTFL*PAGVLH
Trigger: ATGAAGAACACCAGCAGGCAACAGAAATGTTGAGGC...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACCCTTCCTCTGTGACTTaGGACCAAATGCTGTCATGT +
Preference number: 5 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYPSSVT*DQMLSC
Trigger: ACATGACAGCATTTGGTCCAAAGTCACAGAGGAAGG...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGTGTTGCCTCTTGTTTTaGTCTAAAGGACTCACGCAT +
Preference number: 5 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLCCLLF*SKGLTH
Trigger: ATGCGTGAGTCCTTTAGACAAAAACAAGAGGCAACA...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAGTGAAGTTCCTGTCTTaGGCCTCTCCCATTTTCTGT +
Preference number: 5 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTVKFLS*ASPIFC
Trigger: ACAGAAAATGGGAGAGGCCAAAGACAGGAACTTCAC...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAGGTACATTGTGTGTCTaGGTTCTCCATAGAGCTGCA +
Preference number: 5 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTGTLCV*VLHRAA
Trigger: TGCAGCTCTATGGAGAACCAAGACACACAATGTACC...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 90 bp TCCTTTTCTTGTATTAGCTGTGCAAATTTGCCAAACAGCATGGGCTaGTCCCGAGTAGATACAGAATCAGATTCCTTCATGGCAAACCCA +
Preference number: 5 (lower is better)
Translates to: SFSCISCANLPNSMG*SRVDTESDSFMANP
Trigger: TGGGTTTGCCATGAAGGAATCTGATTCTGTATCTACTCGGGATCAGCCCATGCTGTTTGGCAAATTTGCACAGCTAATACAAGAAAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 90 bp TCGGCCTTCTATTGCTGTATCAAATCCCTGGCTTTGACCCCAGTCTaGTTCAGAATCACTGGAATAGACTTCTCTACTTTGATAAGCAAC +
Preference number: 5 (lower is better)
Translates to: SAFYCCIKSLALTPV*FRITGIDFSTLISN
Trigger: GTTGCTTATCAAAGTAGAGAAGTCTATTCCAGTGATTCTGAATCAGACTGGGGTCAAAGCCAGGGATTTGATACAGCAATAGAAGGCCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 90 bp TCTTCCTTCTCCTTCAGCTGTTTCTCCAATTGTTCAGTTTTAAGTTaGAACTCCTGGACTTCCTGCTCAAGGGTACCTTTCTCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: SSFSFSCFSNCSVLS*NSWTSCSRVPFSFS
Trigger: AGAAAAGGAGAAAGGTACCCTTGAGCAGGAAGTCCAGGAGTTGCAACTTAAAACTGAACAATTGGAGAAACAGCTGAAGGAGAAGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 90 bp AATCCATCCCTGTTAATATTGATGGAGCTAGTACTTGTCACTTGCTaGCACCGCCGCACCAAAAATTTCATTCTTGAAATCGCAATGGAC +
Preference number: 5 (lower is better)
Translates to: NPSLLILMELVLVTC*HRRTKNFILEIAMD
Trigger: GTCCATTGCGATTTCAAGAATGAAATTTTTGGTGCGGCGGTGGCAGCAAGTGACAAGTACTAGCTCCATCAATATTAACAGGGATGGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 90 bp CCAAATCCATCCCTGTTAATATTGATGGAGCTAGTACTTGTCACTTaGTGCCACCGCCGCACCAAAAATTTCATTCTTGAAATCGCAATG +
Preference number: 5 (lower is better)
Translates to: PNPSLLILMELVLVT*CHRRTKNFILEIAM
Trigger: CATTGCGATTTCAAGAATGAAATTTTTGGTGCGGCGGTGGCAGCAAGTGACAAGTACTAGCTCCATCAATATTAACAGGGATGGATTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGACTGAATCTGCAGTTTTaGACTTTGTTCTGTCAGCTC +
Preference number: 5 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRLNLQF*TLFCQL
Trigger: GAGCTGACAGAACAAAGTCAAAAACTGCAGATTCAG...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAGCTGAGAGTGCTGTTTaGCAAAGTTTCATTAGCCTG +
Preference number: 5 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTAESAV*QSFISL
Trigger: CAGGCTAATGAAACTTTGCAAAACAGCACTCTCAGC...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACATTGCAGCTGTTGCTGTaGAGTGAAGATCTGTCGTTT +
Preference number: 5 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTLQLLL*SEDLSF
Trigger: AAACGACAGATCTTCACTCAACAGCAACAGCTGCAA...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGTCCTGTAATCTTACATaGAGTTCATTTATGGCGGCA +
Preference number: 5 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLSCNLT*SSFMAA
Trigger: TGCCGCCATAAATGAACTCAATGTAAGATTACAGGA...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGATTGTTCAGTTTTAAGTaGCAACTCCTGGACTTCCTG +
Preference number: 5 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRLFSFK*QLLDFL
Trigger: CAGGAAGTCCAGGAGTTGCAACTTAAAACTGAACAA...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGATTTACCAAGAAGGACTaGCATGCTCTCTTGAAAGTC +
Preference number: 5 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRFTKKD*HALLKV
Trigger: GACTTTCAAGAGAGCATGCAAGTCCTTCTTGGTAAA...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGAATCTATCAGAAAACTTaGCTGTGCCATCCACACACT +
Preference number: 5 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRIYQKT*LCHPHT
Trigger: AGTGTGTGGATGGCACAGCAAAGTTTTCTGATAGAT...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACAAATGCTGTCATGTGTaGCTATGGCAGTTCCAGGAT +
Preference number: 5 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYKCCHV*LWQFQD
Trigger: ATCCTGGAACTGCCATAGCAACACATGACAGCATTT...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACAGACTGGGCTTGCTCTaGTATGGTTTCTGTTTGTTC +
Preference number: 5 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYRLGLL*YGFCLF
Trigger: GAACAAACAGAAACCATACAAGAGCAAGCCCAGTCT...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAGTCCTTTTCCATCTGTaGCCTTGTTTGCAAGGAATC +
Preference number: 5 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTVLFHL*PCLQGI
Trigger: GATTCCTTGCAAACAAGGCAACAGATGGAAAAGGAC...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTCCCTCCAGGTCTAGCTaGTACACCTGCTGCCTTTTC +
Preference number: 5 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSPSRSS*YTCCLF
Trigger: GAAAAGGCAGCAGGTGTACAAGCTAGACCTGGAGGG...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGCTCTCCCATTTTCTGTaGAAGAACCCAATTTCTAGT +
Preference number: 5 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLLSHFL*KNPISS
Trigger: ACTAGAAATTGGGTTCTTCAACAGAAAATGGGAGAG...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACATTAGCTTGTACACTTTaGCTTCTGCCCTCTTCAAGG +
Preference number: 5 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTLACTL*LLPSSR
Trigger: CCTTGAAGAGGGCAGAAGCAAAAGTGTACAAGCTAA...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGAATCTTGAACGGTACATaGTGTGTCTTGGTTCTCCAT +
Preference number: 5 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRILNGT*CVLVLH
Trigger: ATGGAGAACCAAGACACACAATGTACCGTTCAAGAT...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 90 bp TATTTGTTTCTTGCCTCACTTCGAATCTATCAGAAAACTTTGCTGTaGCATCCACACACTCTCTTAGACAGCTTCCACAGTACACTGGTT +
Preference number: 5 (lower is better)
Translates to: YLFLASLRIYQKTLL*HPHTLLDSFHSTLV
Trigger: AACCAGTGTACTGTGGAAGCTGTCTAAGAGAGTGTGTGGATGGCACAGCAAAGTTTTCTGATAGATTCGAAGTGAGGCAAGAAACAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 90 bp GCTTGGCTTTGCTGCCTTAGATCTGTGAGTTCAGCGTTTTTCTCTTaGTCCAGTTCTATGAACCTACTGACTTGTTCTTCAACATCTATT +
Preference number: 5 (lower is better)
Translates to: AWLCCLRSVSSAFFS*SSSMNLLTCSSTSI
Trigger: AATAGATGTTGAAGAACAAGTCAGTAGGTTCATAGAACTGGAGCAAGAGAAAAACGCTGAACTCACAGATCTAAGGCAGCAAAGCCAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000238634.2
CDS-3UTR CAA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACATAATCTTGCAGCTGTaGCTGTTGAGTGAAGATCTG +
Preference number: 5 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYIILQL*LLSEDL
Trigger: CAGATCTTCACTCAACAGCAACAGCTGCAAGATTAT...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAGTCCTCATTAGCTCTTaGATTTCCTCTGAACACTTC +
Preference number: 5 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTVLISS*ISSEHF
Trigger: GAAGTGTTCAGAGGAAATCAAAGAGCTAATGAGGAC...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGCAGCTGTTTCTCCAATaGTTCAGTTTTAAGTTGCAA +
Preference number: 5 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLQLFLQ*FSFKLQ
Trigger: TTGCAACTTAAAACTGAACAATTGGAGAAACAGCTG...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACACGCAAACGTATTCCTTaGCTTCTCGATCTCTTCATT +
Preference number: 5 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTRKRIP*LLDLFI
Trigger: AATGAAGAGATCGAGAAGCAAAGGAATACGTTTGCG...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGAGAGTTCCGTCTGTaGAGCAAATGCTATACTCAT +
Preference number: 5 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTREFRL*SKCYTH
Trigger: ATGAGTATAGCATTTGCTCAACAGACGGAACTCTCT...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAACGGACTTTTTCAGCTaGACACTGTACTTCCAACTT +
Preference number: 5 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTTDFFS*TLYFQL
Trigger: AAGTTGGAAGTACAGTGTCAAGCTGAAAAAGTCCGT...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACACTGGGTTTCCAGATCTaGTATCTGTTCCTTTTGTTC +
Preference number: 5 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTLGFQI*YLFLLF
Trigger: GAACAAAAGGAACAGATACAAGATCTGGAAACCCAG...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACACAAGTTTTTCTGACATaGTACCACTGTGCACTTCAG +
Preference number: 5 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTQVFLT*YHCALQ
Trigger: CTGAAGTGCACAGTGGTACAATGTCAGAAAAACTTG...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACTTCAATGCCCTGCTCTaGTATTCTCTGTTCCAAAGA +
Preference number: 5 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYFNALL*YSLFQR
Trigger: TCTTTGGAACAGAGAATACAAGAGCAGGGCATTGAA...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTGATCAGATTGGTAGATTCCTGGCAGAGTTGTGACTTGAGTAAGGCTGTCCTGCCAAAAATTTCATTCTaGAAATCGCAATGGACACTC +
Preference number: 5 (lower is better)
Translates to: LIRLVDSWQSCDLSKAVLPKISF*KSQWTL
Trigger: GAGTGTCCATTGCGATTTCAAGAATGAAATTTTTGG...CAGGACAGCCTTACTCAAGTCACAACTCTGCCAGGAATCTACCAATCTGATCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACAGTCCAGATCAAATCTaGAACGGTACATTGTGTGTC +
Preference number: 5 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYSPDQI*NGTLCV
Trigger: GACACACAATGTACCGTTCAAGATTTGATCTGGACT...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 90 bp GACTGTACATTTTCAACTTGTCTTCAAGGACTCTCTTCTCCTCTTTaGGAATGTTGTTCTCTGCGTCCAGCTGTGCACATTTTTCTTGAA +
Preference number: 5 (lower is better)
Translates to: DCTFSTCLQGLSSPL*ECCSLRPAVHIFLE
Trigger: TTCAAGAAAAATGTGCACAGCTGGACGCAGAGAACAACATTCTCAAAGAGGAGAAGAGAGTCCTTGAAGACAAGTTGAAAATGTACAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 90 bp AGGAGTTCAAGTTCTCCACATCTCAATAAAAGCTGTTCCTTCTCTTaGTTTAAGGCTCTGACCTCTGCACTTAGAGAATTGATGGTACAA +
Preference number: 5 (lower is better)
Translates to: RSSSSPHLNKSCSFS*FKALTSALRELMVQ
Trigger: TTGTACCATCAATTCTCTAAGTGCAGAGGTCAGAGCCTTAAAGCAAGAGAAGGAACAGCTTTTATTGAGATGTGGAGAACTTGAACTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 90 bp ATTTCTGTTGCCTGCTGGTGTTCTTCATATTGTCGCACAAGTTCTTaGCGCATATCTTCCAACTGTTCATTTAAGATGAGCTGTCTAGAA +
Preference number: 5 (lower is better)
Translates to: ISVACWCSSYCRTSS*RISSNCSFKMSCLE
Trigger: TTCTAGACAGCTCATCTTAAATGAACAGTTGGAAGATATGCGGCAAGAACTTGTGCGACAATATGAAGAACACCAGCAGGCAACAGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CCA 90 bp AACAATCCATCCACATCTCTAGTGCTGAGAGATGTCAGCTCAGTTTaGAATGTAGCTAGTAAAACACTACGTTCCTTTATGAAAACACGC +
Preference number: 5 (lower is better)
Translates to: NNPSTSLVLRDVSSV*NVASKTLRSFMKTR
Trigger: GCGTGTTTTCATAAAGGAACGTAGTGTTTTACTAGCTACATTCCAAACTGAGCTGACATCTCTCAGCACTAGAGATGTGGATGGATTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACACTTTTTCTGATAATCTaGCAGCTGTTGCTGTTGAGT +
Preference number: 5 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTLFLII*QLLLLS
Trigger: ACTCAACAGCAACAGCTGCAAGATTATCAGAAAAAG...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACCATTTCTCTCTTATGTaGGGATTTGAGCTCCTCTAT +
Preference number: 5 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYHFSLM*GFELLY
Trigger: ATAGAGGAGCTCAAATCCCAACATAAGAGAGAAATG...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp ATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAGATCTTCTTTAAAATTCTaGTCCGTTGCCTCAAAAGTC +
Preference number: 5 (lower is better)
Translates to: MKAEQNHTLDPELRQVTRSSLKF*SVASKV
Trigger: GACTTTTGAGGCAACGGACAAGAATTTTAAAGAAGA...TCTTGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 90 bp TTTGAAGCCACATGCTGGAGTGTCTGTCTGATCATTTCCAAGTCATaGTTATGGTCAAGTTCTCCTCCGTTTATTTCAATCAACTTTGTG +
Preference number: 5 (lower is better)
Translates to: FEATCWSVCLIISKS*LWSSSPPFISINFV
Trigger: CACAAAGTTGATTGAAATAAACGGAGGAGAACTTGACCATAATCATGACTTGGAAATGATCAGACAGACACTCCAGCATGTGGCTTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000176863.2
CDS GCA 90 bp AGAGTTTGCGGCATTCTTCCGTCACTTTACCAAGAAGGACTTGCATaGTCTCTTGAAAGTCTTGAACTTCGTATCTATACTCTTGTAATT +
Preference number: 5 (lower is better)
Translates to: RVCGILPSLYQEGLA*SLESLELRIYTLVI
Trigger: AATTACAAGAGTATAGATACGAAGTTCAAGACTTTCAAGAGAGCATGCAAGTCCTTCTTGGTAAAGTGACGGAAGAATGCCGCAAACTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACATTTCATTTGCACTATTaGCTTCCCATACATCTCATC +
Preference number: 5 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTFHLHY*LPIHLI
Trigger: GATGAGATGTATGGGAAGCAAATAGTGCAAATGAAA...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TTAATGAAGGCAGAGCAAAACCACACTTTGGATCCTGAGCTGAGACAAGTAACAAACCATATTTGTTTCTaGCCTCACTTCGAATCTATC +
Preference number: 5 (lower is better)
Translates to: LMKAEQNHTLDPELRQVTNHICF*PHFESI
Trigger: GATAGATTCGAAGTGAGGCAAGAAACAAATATGGTT...TGTTACTTGTCTCAGCTCAGGATCCAAAGTGTGGTTTTGCTCTGCCTTCATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACTATTCGCCTAACTCTTaGCTAAGCGGTTTAAATTCT +
Preference number: 5 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYYSPNS*LSGLNS
Trigger: AGAATTTAAACCGCTTAGCAAAGAGTTAGGCGAATA...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTTGTCTCAGACTGGGCTaGCTCTTGTATGGTTTCTGT +
Preference number: 5 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSCLRLG*LLYGFC
Trigger: ACAGAAACCATACAAGAGCAAGCCCAGTCTGAGACA...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp GATGATAGGGACCACGAGTTGTGGCTTAGTGAAAAATCAAGAAGGTTCAACTACATAGACTTCTCTACTTaGATAAGCAACAGAATCTGC +
Preference number: 5 (lower is better)
Translates to: DDRDHELWLSEKSRRFNYIDFST*ISNRIC
Trigger: GCAGATTCTGTTGCTTATCAAAGTAGAGAAGTCTAT...GTAGTTGAACCTTCTTGATTTTTCACTAAGCCACAACTCGTGGTCCCTATCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 90 bp TGTCCGTTGCCTCAAAAGTCTGAAGACCAACTTGACTTTGTGATGTaGTGTCATTTAATTGGTGTTTGTTTTGAGAACATAGAGTGTGTG +
Preference number: 5 (lower is better)
Translates to: CPLPQKSEDQLDFVM*CHLIGVCFENIECV
Trigger: CACACACTCTATGTTCTCAAAACAAACACCAATTAAATGACATCACATCACAAAGTCAAGTTGGTCTTCAGACTTTTGAGGCAACGGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTGGTATTGAGGTAAGCTaGTCTCTCTTTCAGCCAAGA +
Preference number: 5 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSGIEVS*SLFQPR
Trigger: TCTTGGCTGAAAGAGAGACAAGCTTACCTCAATACC...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 90 bp TATCCGACTTTAAGGTGTTCTCCATTTCTCTCTTATGTTGGGATTTaGGCTCCTCTATCTGAGACATGTGCTGATTTATTAACTCTTGTT +
Preference number: 5 (lower is better)
Translates to: YPTLRCSPFLSYVGI*APLSETCADLLTLV
Trigger: AACAAGAGTTAATAAATCAGCACATGTCTCAGATAGAGGAGCTCAAATCCCAACATAAGAGAGAAATGGAGAACACCTTAAAGTCGGATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000143365.8
CDS TCA 90 bp CCAGTTAGTTTCTGTAGTTGCAAAATAATTCCATCAATATTCTCCTaGATCCAAATAAATGCATCATCACCGGCTGTTTCAAACTGCAGC +
Preference number: 5 (lower is better)
Translates to: PVSFCSCKIIPSIFS*IQINASSPAVSNCS
Trigger: GCTGCAGTTTGAAACAGCCGGTGATGATGCATTTATTTGGATTCAGGAGAATATTGATGGAATTATTTTGCAACTACAGAAACTAACTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CCA 90 bp TTGAAATTGATTTCTTTAAGGACATTGTTCATGTGCGTCATTACCTaGTTGGTGGTTTCTACTTGTTGCTCTAAAACCAGCTTTTCAGCA +
Preference number: 5 (lower is better)
Translates to: LKLISLRTLFMCVIT*LVVSTCCSKTSFSA
Trigger: TGCTGAAAAGCTGGTTTTAGAGCAACAAGTAGAAACCACCAACCAGGTAATGACGCACATGAACAATGTCCTTAAAGAAATCAATTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTCTGTGCACATTTTTCTaGAAGGTCATCTTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSLCTFF*KVIFLL
Trigger: GAGAAGGAAGATGACCTTCAAGAAAAATGTGCACAG...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTCTTCTCTCCAATGTCTaGTCTTTTAACGTCTGTTCC +
Preference number: 5 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSLLSNV*SFNVCS
Trigger: GGAACAGACGTTAAAAGACAAGACATTGGAGAGAAG...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTTTCAGCGTTTTTCTCTaGCTCCAGTTCTATGAACCT +
Preference number: 5 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSFSVFL*LQFYEP
Trigger: AGGTTCATAGAACTGGAGCAAGAGAAAAACGCTGAA...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTGCTTTTCTCAGTTCCTaGTTCTCTTTCCAGAGTCAT +
Preference number: 5 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSAFLSS*FSFQSH
Trigger: ATGACTCTGGAAAGAGAACAAGGAACTGAGAAAAGC...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 90 bp TCCTTTTGTTCTTCAATGACCTTGTTATCCGTTGTGAGTTTAAGTTaGTGCTGCAGTTTTATAAACTGCTCATTTAACCGGTCAATTTCA +
Preference number: 5 (lower is better)
Translates to: SFCSSMTLLSVVSLS*CCSFINCSFNRSIS
Trigger: TGAAATTGACCGGTTAAATGAGCAGTTTATAAAACTGCAGCAGCAACTTAAACTCACAACGGATAACAAGGTCATTGAAGAACAAAAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTTTCTGGGCTTTGATTTaGAGAAGTGTAAACACCAGA +
Preference number: 5 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSFWALI*RSVNTR
Trigger: TCTGGTGTTTACACTTCTCAAAATCAAAGCCCAGAA...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTTTTCCATCTGTTGCCTaGTTTGCAAGGAATCTAGTT +
Preference number: 5 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSFPSVA*FARNLV
Trigger: AACTAGATTCCTTGCAAACAAGGCAACAGATGGAAA...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CCA 90 bp CAACATAATGTTCTTTCTTCAAAGACTCAGTTTCTAAAATATGTCTaGATTCCATATCCAAAATCTCAGCGGCATGTAGCTCTTGTATGT +
Preference number: 5 (lower is better)
Translates to: QHNVLSSKTQFLKYV*IPYPKSQRHVALVC
Trigger: ACATACAAGAGCTACATGCCGCTGAGATTTTGGATATGGAATCCAGACATATTTTAGAAACTGAGTCTTTGAAGAAAGAACATTATGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTTTCTTCCAGTCGTTCTaGATACTGTTTTTCCATCAA +
Preference number: 5 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSFFQSF*ILFFHQ
Trigger: TTGATGGAAAAACAGTATCAAGAACGACTGGAAGAA...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS-3UTR CAA 90 bp TCAAGAAGGTTCAACTACAGTAAGGTGAAAATGGTGAGGTCTTTTTATTTCAGTCGTTGTGAGTTTAAGTaGCTGCTGCAGTTTTATAAA +
Preference number: 5 (lower is better)
Translates to: SRRFNYSKVKMVRSFYFSRCEFK*LLQFYK
Trigger: TTTATAAAACTGCAGCAGCAACTTAAACTCACAACG...ACTGAAATAAAAAGACCTCACCATTTTCACCTTACTGTAGTTGAACCTTCTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 72 bp CTCCTGCAGAAATTGCTGCTCCACGGGGCCAGCCTCTaGTCTCATCGCCTCCCTCTGCCTGCACAGCAGCTG +
Preference number: 6 (lower is better)
Translates to: LLQKLLLHGASL*SHRLPLPAQQL
Trigger: CAGCTGCTGTGCAGGCAGAGGGAGGCGATGAGAGCAGAGGCTGGCCCCGTGGAGCAGCAATTTCTGCAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000238634.2
CDS GCA 72 bp TCTGCTCTCATCGCCTCCCTCTGCCTGCACAGCAGCTaGCGTTCCTCTTCCACCCGGCGTTGGTCTGACTCT +
Preference number: 6 (lower is better)
Translates to: SALIASLCLHSS*RSSSTRRWSDS
Trigger: AGAGTCAGACCAACGCCGGGTGGAAGAGGAACGGCAGCTGCTGTGCAGGCAGAGGGAGGCGATGAGAGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000238634.2
CDS GCA 72 bp AAGGCTGGCGGGGGCTGCCCGCCATCTTCACGGCTCTaGAACTGGGCATACAGCTCCCGTTCCTTGTCTAGT +
Preference number: 6 (lower is better)
Translates to: KAGGGCPPSSRL*NWAYSSRSLSS
Trigger: ACTAGACAAGGAACGGGAGCTGTATGCCCAGTTGCAGAGCCGTGAAGATGGCGGGCAGCCCCCGCCAGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 72 bp TACCTTGGGGAAGGGCTCTGCACTAGCCAGCAGGGCTaGCTCCAGCTCTCGCACTCGGCACTCCAGCTTCTC +
Preference number: 6 (lower is better)
Translates to: YLGEGLCTSQQG*LQLSHSALQLL
Trigger: GAGAAGCTGGAGTGCCGAGTGCGAGAGCTGGAGCAAGCCCTGCTGGCTAGTGCAGAGCCCTTCCCCAAGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 72 bp GGAGGGTCCTGGCACCCTCTCTCTGCTGTTCAGTGCTaGCCACCTCCTGCTGCAGTTTCTCAACCACCCCAG +
Preference number: 6 (lower is better)
Translates to: GGSWHPLSAVQC*PPPAAVSQPPQ
Trigger: CTGGGGTGGTTGAGAAACTGCAGCAGGAGGTGGTCAGCACTGAACAGCAGAGAGAGGGTGCCAGGACCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 72 bp TTAAGTAGGTCCTCAGAAGGCAAGGCTGGCGGGGGCTaGCCGCCATCTTCACGGCTCTGCAACTGGGCATAC +
Preference number: 6 (lower is better)
Translates to: LSRSSEGKAGGG*PPSSRLCNWAY
Trigger: GTATGCCCAGTTGCAGAGCCGTGAAGATGGCGGGCAGCCCCCGCCAGCCTTGCCTTCTGAGGACCTACTTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 90 bp TCTGGGTCTGCTTCTACAGCTCCAGACCTTTTCTGGTCCTCTACCTaGGGGAAGGGCTCTGCACTAGCCAGCAGGGCTTGCTCCAGCTCT +
Preference number: 6 (lower is better)
Translates to: SGSASTAPDLFWSST*GKGSALASRACSSS
Trigger: AGAGCTGGAGCAAGCCCTGCTGGCTAGTGCAGAGCCCTTCCCCAAGGTAGAGGACCAGAAAAGGTCTGGAGCTGTAGAAGCAGACCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 90 bp AAGGCCTCTGCTTCCCGGTTTCTCCTCCGGCTCCAGCTCCTGCTTTaGGAATTCCTGCATAAGCCCTTGCAGTCGCTTTCCCTCCAGGTC +
Preference number: 6 (lower is better)
Translates to: KASASRFLLRLQLLL*EFLHKPLQSLSLQV
Trigger: GACCTGGAGGGAAAGCGACTGCAAGGGCTTATGCAGGAATTCCAAAAGCAGGAGCTGGAGCCGGAGGAGAAACCGGGAAGCAGAGGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000176863.2
CDS TCA 72 bp TCTCCACCTCTGCTAGCCTCAGGGTCACTGTGGGGATaGGTGACTCCGTGCTGGCTCCAGTCAGACCATTTG +
Preference number: 6 (lower is better)
Translates to: SPPLLASGSLWG*VTPCWLQSDHL
Trigger: CAAATGGTCTGACTGGAGCCAGCACGGAGTCACTCATCCCCACAGTGACCCTGAGGCTAGCAGAGGTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 72 bp GCACCCTCTCTCTGCTGTTCAGTGCTGACCACCTCCTaGTGCAGTTTCTCAACCACCCCAGTGAGCTGCTCT +
Preference number: 6 (lower is better)
Translates to: APSLCCSVLTTS*CSFSTTPVSCS
Trigger: AGAGCAGCTCACTGGGGTGGTTGAGAAACTGCAGCAGGAGGTGGTCAGCACTGAACAGCAGAGAGAGGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 72 bp CCATCATCACAGAGGGGACTGGAGAGAGAGAGCACCTaGATGCCCTCACTGTGGACAGCCTTCACTAACCCC +
Preference number: 6 (lower is better)
Translates to: PSSQRGLEREST*MPSLWTAFTNP
Trigger: GGGGTTAGTGAAGGCTGTCCACAGTGAGGGCATGCAGGTGCTCTCTCTCTCCAGTCCCCTCTGTGATGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 72 bp CCTCTGCTTCCCGGTTTCTCCTCCGGCTCCAGCTCCTaGTTTTGGAATTCCTGCATAAGCCCTTGCAGTCGC +
Preference number: 6 (lower is better)
Translates to: PLLPGFSSGSSS*FWNSCISPCSR
Trigger: GCGACTGCAAGGGCTTATGCAGGAATTCCAAAAGCAGGAGCTGGAGCCGGAGGAGAAACCGGGAAGCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000176863.2
CDS GCA 72 bp TGGCTGGCTCATTCAGATTCTGATCCACAAGGCCTCTaGTTCCCGGTTTCTCCTCCGGCTCCAGCTCCTGCT +
Preference number: 6 (lower is better)
Translates to: WLAHSDSDPQGL*FPVSPPAPAPA
Trigger: AGCAGGAGCTGGAGCCGGAGGAGAAACCGGGAAGCAGAGGCCTTGTGGATCAGAATCTGAATGAGCCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CCA 72 bp CTCTGGATGCTGACCGACGGCAGCATGTGCATACCTTaGCTGAACCGGAGCCTCACTGACAGCCTCAAGTCT +
Preference number: 6 (lower is better)
Translates to: LWMLTDGSMCIP*LNRSLTDSLKS
Trigger: AGACTTGAGGCTGTCAGTGAGGCTCCGGTTCAGCCAAGGTATGCACATGCTGCCGTCGGTCAGCATCCAGAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000133952.2
CDS CAA 90 bp GCAGCCACGATCTCAGCTTTTAGGTCTTCCACTGTGCTCAGGGACTaGCGCGCCTCACTCAGCCTGTTCTCTTGCTCTGCGATTGTCTGC +
Preference number: 6 (lower is better)
Translates to: AATISAFRSSTVLRD*RASLSLFSCSAIVC
Trigger: GCAGACAATCGCAGAGCAAGAGAACAGGCTGAGTGAGGCGCGCAAGTCCCTGAGCACAGTGGAAGACCTAAAAGCTGAGATCGTGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000143365.8
CDS TCA 72 bp ACTCAGTTTCTGCTCTGTGGTTTGCTTCGGTTTCCGTaGGCTGCAGCTGTCCGGCAGCCACAGGGCTCTGTA +
Preference number: 6 (lower is better)
Translates to: TQFLLCGLLRFP*AAAVRQPQGSV
Trigger: TACAGAGCCCTGTGGCTGCCGGACAGCTGCAGCTCACGGAAACCGAAGCAAACCACAGAGCAGAAACTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000133952.2
CDS TCA 72 bp TACAGGCCCAGCAAAACCACTCCTCACGAGCCGCTGTaGCAGCTCTGCTCCTTCCTCTGTGACTTTGGACCA +
Preference number: 6 (lower is better)
Translates to: YRPSKTTPHEPL*QLCSFLCDFGP
Trigger: TGGTCCAAAGTCACAGAGGAAGGAGCAGAGCTGTCACAGCGGCTCGTGAGGAGTGGTTTTGCTGGGCCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 72 bp AGGCAGCCACGATCTCAGCTTTTAGGTCTTCCACTGTaGTCAGGGACTTGCGCGCCTCACTCAGCCTGTTCT +
Preference number: 6 (lower is better)
Translates to: RQPRSQLLGLPL*SGTCAPHSACS
Trigger: AGAACAGGCTGAGTGAGGCGCGCAAGTCCCTGAGCACAGTGGAAGACCTAAAAGCTGAGATCGTGGCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000143365.8
CDS CCA 72 bp CTGCACAGCAGCTGCCGTTCCTCTTCCACCCGGCGTTaGTCTGACTCTAGCTCCTGCAGTCTGTTGTTCATA +
Preference number: 6 (lower is better)
Translates to: LHSSCRSSSTRR*SDSSSCSLLFI
Trigger: TATGAACAACAGACTGCAGGAGCTAGAGTCAGACCAACGCCGGGTGGAAGAGGAACGGCAGCTGCTGTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000238634.2
CDS CCA 72 bp CCCAGAGCAGCCACCTACTTCAACAGAAGGTGGCTCTaGTATGGGGGCCTCTCTGCTTTCCTGTTCTCCAGT +
Preference number: 6 (lower is better)
Translates to: PRAATYFNRRWL*YGGLSAFLFSS
Trigger: ACTGGAGAACAGGAAAGCAGAGAGGCCCCCATACCAGAGCCACCTTCTGTTGAAGTAGGTGGCTGCTCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CCA 72 bp TGTGAGCCCAGAGCAGCCACCTACTTCAACAGAAGGTaGCTCTGGTATGGGGGCCTCTCTGCTTTCCTGTTC +
Preference number: 6 (lower is better)
Translates to: CEPRAATYFNRR*LWYGGLSAFLF
Trigger: GAACAGGAAAGCAGAGAGGCCCCCATACCAGAGCCACCTTCTGTTGAAGTAGGTGGCTGCTCTGGGCTCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CCA 72 bp TCCAGGTCTAGCTTGTACACCTGCTGCCTTTTCTCCTaGAGCTGGCGCTGCAGCTCTTCCACTTTGGACTGC +
Preference number: 6 (lower is better)
Translates to: SRSSLYTCCLFS*SWRCSSSTLDC
Trigger: GCAGTCCAAAGTGGAAGAGCTGCAGCGCCAGCTCCAGGAGAAAAGGCAGCAGGTGTACAAGCTAGACCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000176863.2
CDS CCA 72 bp CTTCCCGGTTTCTCCTCCGGCTCCAGCTCCTGCTTTTaGAATTCCTGCATAAGCCCTTGCAGTCGCTTTCCC +
Preference number: 6 (lower is better)
Translates to: LPGFSSGSSSCF*NSCISPCSRFP
Trigger: GGGAAAGCGACTGCAAGGGCTTATGCAGGAATTCCAAAAGCAGGAGCTGGAGCCGGAGGAGAAACCGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000176863.2
CDS CAA 72 bp TTGGTGGAACGGCACATACTCCTGAGCTGCCTCCATTaGGACCTGACTGACCAGTGCAGCGGCGAACTTCTC +
Preference number: 6 (lower is better)
Translates to: LVERHILLSCLH*DLTDQCSGELL
Trigger: GAGAAGTTCGCCGCTGCACTGGTCAGTCAGGTCCAAATGGAGGCAGCTCAGGAGTATGTGCCGTTCCACCAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 72 bp ATAAGCCCTTGCAGTCGCTTTCCCTCCAGGTCTAGCTaGTACACCTGCTGCCTTTTCTCCTGGAGCTGGCGC +
Preference number: 6 (lower is better)
Translates to: ISPCSRFPSRSS*YTCCLFSWSWR
Trigger: GCGCCAGCTCCAGGAGAAAAGGCAGCAGGTGTACAAGCTAGACCTGGAGGGAAAGCGACTGCAAGGGCTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000176863.2
CDS CAA 72 bp GCTTCCCGGTTTCTCCTCCGGCTCCAGCTCCTGCTTTaGGAATTCCTGCATAAGCCCTTGCAGTCGCTTTCC +
Preference number: 6 (lower is better)
Translates to: ASRFLLRLQLLL*EFLHKPLQSLS
Trigger: GGAAAGCGACTGCAAGGGCTTATGCAGGAATTCCAAAAGCAGGAGCTGGAGCCGGAGGAGAAACCGGGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000176863.2
CDS CAA 90 bp AATTCCTGCATAAGCCCTTGCAGTCGCTTTCCCTCCAGGTCTAGCTaGTACACCTGCTGCCTTTTCTCCTGGAGCTGGCGCTGCAGCTCT +
Preference number: 6 (lower is better)
Translates to: NSCISPCSRFPSRSS*YTCCLFSWSWRCSS
Trigger: AGAGCTGCAGCGCCAGCTCCAGGAGAAAAGGCAGCAGGTGTACAAGCTAGACCTGGAGGGAAAGCGACTGCAAGGGCTTATGCAGGAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000176863.2
CDS TCA 72 bp CAGCGGCGAACTTCTCAAGGCTTCTCTGCAGGTCTGTaGGCTTCTTCTGAAGCCTGTCTGTCTCAGACTGGG +
Preference number: 6 (lower is better)
Translates to: QRRTSQGFSAGL*ASSEACLSQTG
Trigger: CCCAGTCTGAGACAGACAGGCTTCAGAAGAAGCTCACAGACCTGCAGAGAAGCCTTGAGAAGTTCGCCGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 72 bp GCACATACTCCTGAGCTGCCTCCATTTGGACCTGACTaGCCAGTGCAGCGGCGAACTTCTCAAGGCTTCTCT +
Preference number: 6 (lower is better)
Translates to: AHTPELPPFGPD*PVQRRTSQGFS
Trigger: AGAGAAGCCTTGAGAAGTTCGCCGCTGCACTGGTCAGTCAGGTCCAAATGGAGGCAGCTCAGGAGTATGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 72 bp TCTCAGCTTTTAGGTCTTCCACTGTGCTCAGGGACTTaGGCGCCTCACTCAGCCTGTTCTCTTGCTCTGCGA +
Preference number: 6 (lower is better)
Translates to: SQLLGLPLCSGT*APHSACSLALR
Trigger: TCGCAGAGCAAGAGAACAGGCTGAGTGAGGCGCGCAAGTCCCTGAGCACAGTGGAAGACCTAAAAGCTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000143365.8
CDS GCA 72 bp GGTTTGGTCACATCCTGGGCAGGGGCATCTTCTGGCTaGAGATTGTCACTGCCTAGCTCATGCACAGTCATG +
Preference number: 6 (lower is better)
Translates to: GLVTSWAGASSG*RLSLPSSCTVM
Trigger: CATGACTGTGCATGAGCTAGGCAGTGACAATCTGCAGCCAGAAGATGCCCCTGCCCAGGATGTGACCAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 72 bp CATCACAGAGGGGACTGGAGAGAGAGAGCACCTGCATaGCCTCACTGTGGACAGCCTTCACTAACCCCTTTA +
Preference number: 6 (lower is better)
Translates to: HHRGDWRERAPA*PHCGQPSLTPL
Trigger: TAAAGGGGTTAGTGAAGGCTGTCCACAGTGAGGGCATGCAGGTGCTCTCTCTCTCCAGTCCCCTCTGTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 72 bp TCGGCTGCTCTGTCTCTCAGGCTGCTGAGTTCCAGTTaGATTTCCAGCGACTGCTTCTGCTGCATACTGCAG +
Preference number: 6 (lower is better)
Translates to: SAALSLRLLSSS*ISSDCFCCILQ
Trigger: CTGCAGTATGCAGCAGAAGCAGTCGCTGGAAATGCAACTGGAACTCAGCAGCCTGAGAGACAGAGCAGCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 72 bp TCCTGGAGCTGGCGCTGCAGCTCTTCCACTTTGGACTaGAGCTCCTGCATTTTCTTTTGGCCCTGGGTGTTT +
Preference number: 6 (lower is better)
Translates to: SWSWRCSSSTLD*SSCIFFWPWVF
Trigger: AAACACCCAGGGCCAAAAGAAAATGCAGGAGCTGCAGTCCAAAGTGGAAGAGCTGCAGCGCCAGCTCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000176863.2
CDS GCA 72 bp TTGTACACCTGCTGCCTTTTCTCCTGGAGCTGGCGCTaGAGCTCTTCCACTTTGGACTGCAGCTCCTGCATT +
Preference number: 6 (lower is better)
Translates to: LYTCCLFSWSWR*SSSTLDCSSCI
Trigger: AATGCAGGAGCTGCAGTCCAAAGTGGAAGAGCTGCAGCGCCAGCTCCAGGAGAAAAGGCAGCAGGTGTACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000176863.2
CDS GCA 72 bp TTCTCCTCCGGCTCCAGCTCCTGCTTTTGGAATTCCTaGATAAGCCCTTGCAGTCGCTTTCCCTCCAGGTCT +
Preference number: 6 (lower is better)
Translates to: FSSGSSSCFWNS*ISPCSRFPSRS
Trigger: AGACCTGGAGGGAAAGCGACTGCAAGGGCTTATGCAGGAATTCCAAAAGCAGGAGCTGGAGCCGGAGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000176863.2
CDS CAA 72 bp ATCTCAGCTTTTAGGTCTTCCACTGTGCTCAGGGACTaGCGCGCCTCACTCAGCCTGTTCTCTTGCTCTGCG +
Preference number: 6 (lower is better)
Translates to: ISAFRSSTVLRD*RASLSLFSCSA
Trigger: CGCAGAGCAAGAGAACAGGCTGAGTGAGGCGCGCAAGTCCCTGAGCACAGTGGAAGACCTAAAAGCTGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000143365.8
CDS CAA 72 bp GTCACATCCTGGGCAGGGGCATCTTCTGGCTGCAGATaGTCACTGCCTAGCTCATGCACAGTCATGTGGACA +
Preference number: 6 (lower is better)
Translates to: VTSWAGASSGCR*SLPSSCTVMWT
Trigger: TGTCCACATGACTGTGCATGAGCTAGGCAGTGACAATCTGCAGCCAGAAGATGCCCCTGCCCAGGATGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 72 bp CATGTAGCTTTCTCTTACCTCCCCATCCCGAGAGCTTaGTTCTCCTCCCTCTTCCGGTCTTTCCTCGGCCTC +
Preference number: 6 (lower is better)
Translates to: HVAFSYLPIPRA*FSSLFRSFLGL
Trigger: GAGGCCGAGGAAAGACCGGAAGAGGGAGGAGAACAAAGCTCTCGGGATGGGGAGGTAAGAGAAAGCTACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 90 bp GCGCTGCAGCTCTTCCACTTTGGACTGCAGCTCCTGCATTTTCTTTaGGCCCTGGGTGTTTGCCTCCTGTTCTGTCTGCAGTGTCTTCTG +
Preference number: 6 (lower is better)
Translates to: ALQLFHFGLQLLHFL*ALGVCLLFCLQCLL
Trigger: CAGAAGACACTGCAGACAGAACAGGAGGCAAACACCCAGGGCCAAAAGAAAATGCAGGAGCTGCAGTCCAAAGTGGAAGAGCTGCAGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000176863.2
CDS TCA 72 bp CGGCACTCCAGCTTCTCAATCTCCTCATTCCTCTCCTaGATGTCTCGCTGCAGTTGCTCCTTGGATAGCAGC +
Preference number: 6 (lower is better)
Translates to: RHSSFSISSFLS*MSRCSCSLDSS
Trigger: GCTGCTATCCAAGGAGCAACTGCAGCGAGACATTCAGGAGAGGAATGAGGAGATTGAGAAGCTGGAGTGCCG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 72 bp TCAGTGAAGTTCCAGGTGGCTGGCTCATTCAGATTCTaGTCCACAAGGCCTCTGCTTCCCGGTTTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: SVKFQVAGSFRF*STRPLLPGFSS
Trigger: GGAGGAGAAACCGGGAAGCAGAGGCCTTGTGGATCAGAATCTGAATGAGCCAGCCACCTGGAACTTCACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 72 bp CTAGTGCCACACCATCTGTCTGTTGTTCATGGATCTTaGCTAAGCGCGTCTGCAGTCCTGAGAGTTTGCGGC +
Preference number: 6 (lower is better)
Translates to: LVPHHLSVVHGS*LSASAVLRVCG
Trigger: GCCGCAAACTCTCAGGACTGCAGACGCGCTTAGGCAAGATCCATGAACAACAGACAGATGGTGTGGCACTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 72 bp AGCTGCTCGTTGAGTCTCTTGATTTCCTCTTGGAGCTaGTCCTGGTCTTCCCGTTGCCTCTCCATCTGTTGC +
Preference number: 6 (lower is better)
Translates to: SCSLSLLISSWS*SWSSRCLSICC
Trigger: GCAACAGATGGAGAGGCAACGGGAAGACCAGGAGCAGCTCCAAGAGGAAATCAAGAGACTCAACGAGCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 72 bp CATCTTTTCCGAACTCAGCTGTTCCTGCAGCTCGGCTaGTCTGTCTCTCAGGCTGCTGAGTTCCAGTTGCAT +
Preference number: 6 (lower is better)
Translates to: HLFRTQLFLQLG*SVSQAAEFQLH
Trigger: ATGCAACTGGAACTCAGCAGCCTGAGAGACAGAGCAGCCGAGCTGCAGGAACAGCTGAGTTCGGAAAAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CCA 72 bp CTTTTTGCCACCTCGAGTCTGCCGACTTGCTTGTGCTaGGATCTACGGCAATGGATCTCTCCTCTTGTTCCG +
Preference number: 6 (lower is better)
Translates to: LFATSSLPTCLC*DLRQWISPLVP
Trigger: CGGAACAAGAGGAGAGATCCATTGCCGTAGATCCCAGCACAAGCAAGTCGGCAGACTCGAGGTGGCAAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CCA 72 bp AATTCTGGGTCTGCTTCTACAGCTCCAGACCTTTTCTaGTCCTCTACCTTGGGGAAGGGCTCTGCACTAGCC +
Preference number: 6 (lower is better)
Translates to: NSGSASTAPDLF*SSTLGKGSALA
Trigger: GGCTAGTGCAGAGCCCTTCCCCAAGGTAGAGGACCAGAAAAGGTCTGGAGCTGTAGAAGCAGACCCAGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 72 bp TCGGTCCCAAAGCTGGCCCTCATCTCTTCCAACTCCTaGGTCAACTCTTCAATATCATGCTGCTTCTCGGCC +
Preference number: 6 (lower is better)
Translates to: SVPKLALISSNS*VNSSISCCFSA
Trigger: GGCCGAGAAGCAGCATGATATTGAAGAGTTGACTCAGGAGTTGGAAGAGATGAGGGCCAGCTTTGGGACCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000143365.8
CDS TCA 72 bp ACGCTGACAGGCAAGCAGAAGTTCACCTCGCCAGTCTaGGAGGTGACACCTGTCATAGACCTCAGTTTCTCT +
Preference number: 6 (lower is better)
Translates to: TLTGKQKFTSPV*EVTPVIDLSFS
Trigger: AGAGAAACTGAGGTCTATGACAGGTGTCACCTCTCAGACTGGCGAGGTGAACTTCTGCTTGCCTGTCAGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 72 bp AACTGCAGCCTGCTGCAGGCTTTCTGGGCTACATGCTaGAGTTTTGAAGCCACATGCTGGAGTGTCTGTCTG +
Preference number: 6 (lower is better)
Translates to: NCSLLQAFWATC*SFEATCWSVCL
Trigger: CAGACAGACACTCCAGCATGTGGCTTCAAAACTTCAGCATGTAGCCCAGAAAGCCTGCAGCAGGCTGCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 72 bp TCGCTACTTCTTTTTGCCACCTCGAGTCTGCCGACTTaGTTGTGCTGGGATCTACGGCAATGGATCTCTCCT +
Preference number: 6 (lower is better)
Translates to: SLLLFATSSLPT*LCWDLRQWISP
Trigger: AGGAGAGATCCATTGCCGTAGATCCCAGCACAAGCAAGTCGGCAGACTCGAGGTGGCAAAAAGAAGTAGCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 72 bp CTTCCTGATCGTCATGTCCATCCTGTGTTTGCGTACTaGTGTGGCGCAGCTCACAACACAGCTCCTTTCTTC +
Preference number: 6 (lower is better)
Translates to: LPDRHVHPVFAY*CGAAHNTAPFF
Trigger: GAAGAAAGGAGCTGTGTTGTGAGCTGCGCCACAGCAGTACGCAAACACAGGATGGACATGACGATCAGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 72 bp TCCAGGATAGGAGGGTATGGACTCATCCATAGCTCTTaGACAATCTTCTGGTGCACAAGTCGTGGCGGATGC +
Preference number: 6 (lower is better)
Translates to: SRIGGYGLIHSS*TIFWCTSRGGC
Trigger: GCATCCGCCACGACTTGTGCACCAGAAGATTGTGCAAGAGCTATGGATGAGTCCATACCCTCCTATCCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 72 bp CTGCTGAGTTCCAGTTGCATTTCCAGCGACTGCTTCTaGTGCATACTGCAGTCCAGGAGTTCTTGGCTGCTT +
Preference number: 6 (lower is better)
Translates to: LLSSSCISSDCF*CILQSRSSWLL
Trigger: AAGCAGCCAAGAACTCCTGGACTGCAGTATGCAGCAGAAGCAGTCGCTGGAAATGCAACTGGAACTCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 72 bp TCCAGCTCCTGCTTTTGGAATTCCTGCATAAGCCCTTaGAGTCGCTTTCCCTCCAGGTCTAGCTTGTACACC +
Preference number: 6 (lower is better)
Translates to: SSSCFWNSCISP*SRFPSRSSLYT
Trigger: GGTGTACAAGCTAGACCTGGAGGGAAAGCGACTGCAAGGGCTTATGCAGGAATTCCAAAAGCAGGAGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000176863.2
CDS GCA 72 bp AATGGACACTCTGACGGCGGAGCGAAACCTGCTGAATaGCTTCGGGTGGTTGGTGATGGTCTTGGAATCTTT +
Preference number: 6 (lower is better)
Translates to: NGHSDGGAKPAE*LRVVGDGLGIF
Trigger: AAAGATTCCAAGACCATCACCAACCACCCGAAGGCATTCAGCAGGTTTCGCTCCGCCGTCAGAGTGTCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CCA 72 bp TCAAGTCTCTGCTGCAAAGACTCAGTTTCTGCTCTGTaGTTTGCTTCGGTTTCCGTGAGCTGCAGCTGTCCG +
Preference number: 6 (lower is better)
Translates to: SSLCCKDSVSAL*FASVSVSCSCP
Trigger: CGGACAGCTGCAGCTCACGGAAACCGAAGCAAACCACAGAGCAGAAACTGAGTCTTTGCAGCAGAGACTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000133952.2
CDS CCA 72 bp CTTGTCCAGCTGATGTTTAAAGCTCTCCTCATCTTCTaGGAGGGTCCTGGCACCCTCTCTCTGCTGTTCAGT +
Preference number: 6 (lower is better)
Translates to: LVQLMFKALLIF*EGPGTLSLLFS
Trigger: ACTGAACAGCAGAGAGAGGGTGCCAGGACCCTCCCAGAAGATGAGGAGAGCTTTAAACATCAGCTGGACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CCA 72 bp AGGGAGGTCTGTTTTTCTAGAGGTTTGGTCACATCCTaGGCAGGGGCATCTTCTGGCTGCAGATTGTCACTG +
Preference number: 6 (lower is better)
Translates to: REVCFSRGLVTS*AGASSGCRLSL
Trigger: CAGTGACAATCTGCAGCCAGAAGATGCCCCTGCCCAGGATGTGACCAAACCTCTAGAAAAACAGACCTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 72 bp TCTAGTGCCACACCATCTGTCTGTTGTTCATGGATCTaGCCTAAGCGCGTCTGCAGTCCTGAGAGTTTGCGG +
Preference number: 6 (lower is better)
Translates to: SSATPSVCCSWI*PKRVCSPESLR
Trigger: CCGCAAACTCTCAGGACTGCAGACGCGCTTAGGCAAGATCCATGAACAACAGACAGATGGTGTGGCACTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 72 bp ATGGAGGATTTCTGGGCTAGCTGCTCGTTGAGTCTCTaGATTTCCTCTTGGAGCTGCTCCTGGTCTTCCCGT +
Preference number: 6 (lower is better)
Translates to: MEDFWASCSLSL*ISSWSCSWSSR
Trigger: ACGGGAAGACCAGGAGCAGCTCCAAGAGGAAATCAAGAGACTCAACGAGCAGCTAGCCCAGAAATCCTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 72 bp TTCCTCAACTTCCTGATCGTCATGTCCATCCTGTGTTaGCGTACTGCTGTGGCGCAGCTCACAACACAGCTC +
Preference number: 6 (lower is better)
Translates to: FLNFLIVMSILC*RTAVAQLTTQL
Trigger: GAGCTGTGTTGTGAGCTGCGCCACAGCAGTACGCAAACACAGGATGGACATGACGATCAGGAAGTTGAGGAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 72 bp CTCTTCCACTTTGGACTGCAGCTCCTGCATTTTCTTTaGGCCCTGGGTGTTTGCCTCCTGTTCTGTCTGCAG +
Preference number: 6 (lower is better)
Translates to: LFHFGLQLLHFL*ALGVCLLFCLQ
Trigger: CTGCAGACAGAACAGGAGGCAAACACCCAGGGCCAAAAGAAAATGCAGGAGCTGCAGTCCAAAGTGGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000176863.2
CDS CAA 90 bp CCTCCCTCTCCTTTTCCATGTGTGCACGAACCTGATCCGCATGAGTaGAGTAAACCACAAAAAGGCATATGCGCTGGGCCTCCATCTGCA +
Preference number: 6 (lower is better)
Translates to: PPSPFPCVHEPDPHE*SKPQKGICAGPPSA
Trigger: TGCAGATGGAGGCCCAGCGCATATGCCTTTTTGTGGTTTACTCAACTCATGCGGATCAGGTTCGTGCACACATGGAAAAGGAGAGGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 90 bp AGAGGTTTGGTCACATCCTGGGCAGGGGCATCTTCTGGCTGCAGATaGTCACTGCCTAGCTCATGCACAGTCATGTGGACACTTTCCTTA +
Preference number: 6 (lower is better)
Translates to: RGLVTSWAGASSGCR*SLPSSCTVMWTLSL
Trigger: TAAGGAAAGTGTCCACATGACTGTGCATGAGCTAGGCAGTGACAATCTGCAGCCAGAAGATGCCCCTGCCCAGGATGTGACCAAACCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 90 bp CTCAACGTCCTTGGCGCCAACAGAGCTTGCCAGGGACTCTATTTCTaGTGTTCTAGAAGCTTCAGGGCTTTTCTGAAGACGCGTAAGGGA +
Preference number: 6 (lower is better)
Translates to: LNVLGANRACQGLYF*CSRSFRAFLKTRKG
Trigger: TCCCTTACGCGTCTTCAGAAAAGCCCTGAAGCTTCTAGAACACAAGAAATAGAGTCCCTGGCAAGCTCTGTTGGCGCCAAGGACGTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 90 bp AAGCCTGTCTGTCTCAGACTGGGCTTGCTCTTGTATGGTTTCTGTTaGTTCACGACACTGGGTAAGCTCAACGTCCTTGGCGCCAACAGA +
Preference number: 6 (lower is better)
Translates to: KPVCLRLGLLLYGFC*FTTLGKLNVLGANR
Trigger: TCTGTTGGCGCCAAGGACGTTGAGCTTACCCAGTGTCGTGAACAAACAGAAACCATACAAGAGCAAGCCCAGTCTGAGACAGACAGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 72 bp TTCTCAAGGCTTCTCTGCAGGTCTGTGAGCTTCTTCTaGAGCCTGTCTGTCTCAGACTGGGCTTGCTCTTGT +
Preference number: 6 (lower is better)
Translates to: FSRLLCRSVSFF*SLSVSDWACSC
Trigger: ACAAGAGCAAGCCCAGTCTGAGACAGACAGGCTTCAGAAGAAGCTCACAGACCTGCAGAGAAGCCTTGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 72 bp ACCTCTTCTTGGGAGCTCTCACTCTGTAAGTCAGTCTaGATCGCTGCGTCTCTAAGAAGGATCTGCAGGGTC +
Preference number: 6 (lower is better)
Translates to: TSSWELSLCKSV*IAASLRRICRV
Trigger: GACCCTGCAGATCCTTCTTAGAGACGCAGCGATTCAGACTGACTTACAGAGTGAGAGCTCCCAAGAAGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 72 bp TCTCCTCATGCCAAAGTGAAATTGAGTAGTGGACCCTaGCTGTATAGCTCCAAGTCGCCTTCTCAGCGCCTC +
Preference number: 6 (lower is better)
Translates to: SPHAKVKLSSGP*LYSSKSPSQRL
Trigger: GAGGCGCTGAGAAGGCGACTTGGAGCTATACAGTCAGGGTCCACTACTCAATTTCACTTTGGCATGAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 72 bp CTGGGTAAGCTCAACGTCCTTGGCGCCAACAGAGCTTaGCAGGGACTCTATTTCTTGTGTTCTAGAAGCTTC +
Preference number: 6 (lower is better)
Translates to: LGKLNVLGANRA*QGLYFLCSRSF
Trigger: GAAGCTTCTAGAACACAAGAAATAGAGTCCCTGGCAAGCTCTGTTGGCGCCAAGGACGTTGAGCTTACCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 72 bp CCAGTTGCATTTCCAGCGACTGCTTCTGCTGCATACTaGAGTCCAGGAGTTCTTGGCTGCTTTTCTCAGTTC +
Preference number: 6 (lower is better)
Translates to: PVAFPATASAAY*SPGVLGCFSQF
Trigger: GAACTGAGAAAAGCAGCCAAGAACTCCTGGACTGCAGTATGCAGCAGAAGCAGTCGCTGGAAATGCAACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 72 bp CTTGCTCTGACTCCAGGAGAGCTTGAAGCCCTAAGTTaGGGCCTTGTTCTTCTGATAACTGGGCATCATGCA +
Preference number: 6 (lower is better)
Translates to: LALTPGELEALS*GLVLLITGHHA
Trigger: TGCATGATGCCCAGTTATCAGAAGAACAAGGCCGCAACTTAGGGCTTCAAGCTCTCCTGGAGTCAGAGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CCA 72 bp GTAGAAATTTCACTTTCAGGTTCAGCAGAGAAGACCTaGCCGTGCTTTCTCTCTGGCCCGGAGCAATCAGGA +
Preference number: 6 (lower is better)
Translates to: VEISLSGSAEKT*PCFLSGPEQSG
Trigger: TCCTGATTGCTCCGGGCCAGAGAGAAAGCACGGCCAGGTCTTCTCTGCTGAACCTGAAAGTGAAATTTCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000143365.8
CDS CCA 72 bp GCAAACTCTAGTGCCACACCATCTGTCTGTTGTTCATaGATCTTGCCTAAGCGCGTCTGCAGTCCTGAGAGT +
Preference number: 6 (lower is better)
Translates to: ANSSATPSVCCS*ILPKRVCSPES
Trigger: ACTCTCAGGACTGCAGACGCGCTTAGGCAAGATCCATGAACAACAGACAGATGGTGTGGCACTAGAGTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CCA 72 bp TCAGGAATGGAGGATCCCTCTTTGCATCTCAGACACTaGGTCATCTCCTTCAGGGTCTCGCATTCCTTAGTC +
Preference number: 6 (lower is better)
Translates to: SGMEDPSLHLRH*VISFRVSHSLV
Trigger: GACTAAGGAATGCGAGACCCTGAAGGAGATGACCCAGTGTCTGAGATGCAAAGAGGGATCCTCCATTCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CCA 72 bp GGACTGGAGAGAGAGAGCACCTGCATGCCCTCACTGTaGACAGCCTTCACTAACCCCTTTATTTTCTTTGGA +
Preference number: 6 (lower is better)
Translates to: GLERESTCMPSL*TAFTNPFIFFG
Trigger: TCCAAAGAAAATAAAGGGGTTAGTGAAGGCTGTCCACAGTGAGGGCATGCAGGTGCTCTCTCTCTCCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 72 bp CTTTTCGAAAGGAGCTCTTCCTCCAGCGCTCTCAGCTaGCTCTCATATTCCAATGCCTGCTTGGTCTGTGTG +
Preference number: 6 (lower is better)
Translates to: LFERSSSSSALS*LSYSNACLVCV
Trigger: CACACAGACCAAGCAGGCATTGGAATATGAGAGCAAGCTGAGAGCGCTGGAGGAAGAGCTCCTTTCGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 72 bp ACCCGGCGTTGGTCTGACTCTAGCTCCTGCAGTCTGTaGTTCATACATAACACCTCCTGCTCAAGATGCTCT +
Preference number: 6 (lower is better)
Translates to: TRRWSDSSSCSL*FIHNTSCSRCS
Trigger: AGAGCATCTTGAGCAGGAGGTGTTATGTATGAACAACAGACTGCAGGAGCTAGAGTCAGACCAACGCCGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000238634.2
CDS TCA 72 bp TTCTCTCTCCTTGCTTGCTGCAAGTTAGCTGTGAGCTaGGTTATGATGCCGTCTCGCTGTTTAATGGCGGCT +
Preference number: 6 (lower is better)
Translates to: FSLLACCKLAVS*VMMPSRCLMAA
Trigger: AGCCGCCATTAAACAGCGAGACGGCATCATAACTCAGCTCACAGCTAACTTGCAGCAAGCAAGGAGAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000143365.8
CDS TCA 72 bp CCTCCATCTGCAGCCTTAGATCATCCTGCTCGGCTTTaGGGGCATGAAGCTCTTGCTGGAGTTTTTCACTTT +
Preference number: 6 (lower is better)
Translates to: PPSAALDHPARL*GHEALAGVFHF
Trigger: AAAGTGAAAAACTCCAGCAAGAGCTTCATGCCCTCAAAGCCGAGCAGGATGATCTAAGGCTGCAGATGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 72 bp CTTTTCCATGTGTGCACGAACCTGATCCGCATGAGTTaGGTAAACCACAAAAAGGCATATGCGCTGGGCCTC +
Preference number: 6 (lower is better)
Translates to: LFHVCTNLIRMS*VNHKKAYALGL
Trigger: GAGGCCCAGCGCATATGCCTTTTTGTGGTTTACTCAACTCATGCGGATCAGGTTCGTGCACACATGGAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 72 bp CACTCGCAGGCAGAGAAGACACCTTGCTCTCAAGACTaGCATCTGTGCTCTGTAAAGCACTCTGAGAACAAC +
Preference number: 6 (lower is better)
Translates to: HSQAEKTPCSQD*HLCSVKHSENN
Trigger: GTTGTTCTCAGAGTGCTTTACAGAGCACAGATGTCAGTCTTGAGAGCAAGGTGTCTTCTCTGCCTGCGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000133952.2
CDS TCA 72 bp TCTGCTTCTGACCTCCAAAGCAGGCTGCTAGCTGTCTaGCCTTTACTAGATCGGTCCAGAATCCCAAGAACA +
Preference number: 6 (lower is better)
Translates to: SASDLQSRLLAV*PLLDRSRIPRT
Trigger: TGTTCTTGGGATTCTGGACCGATCTAGTAAAGGTCAGACAGCTAGCAGCCTGCTTTGGAGGTCAGAAGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 72 bp CAGAATCTGCCAATTCAGGAATGGAGGATCCCTCTTTaGATCTCAGACACTGGGTCATCTCCTTCAGGGTCT +
Preference number: 6 (lower is better)
Translates to: QNLPIQEWRIPL*ISDTGSSPSGS
Trigger: AGACCCTGAAGGAGATGACCCAGTGTCTGAGATGCAAAGAGGGATCCTCCATTCCTGAATTGGCAGATTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 72 bp CCTTTTCCATGTGTGCACGAACCTGATCCGCATGAGTaGAGTAAACCACAAAAAGGCATATGCGCTGGGCCT +
Preference number: 6 (lower is better)
Translates to: PFPCVHEPDPHE*SKPQKGICAGP
Trigger: AGGCCCAGCGCATATGCCTTTTTGTGGTTTACTCAACTCATGCGGATCAGGTTCGTGCACACATGGAAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 72 bp CTTGGCGCCAACAGAGCTTGCCAGGGACTCTATTTCTaGTGTTCTAGAAGCTTCAGGGCTTTTCTGAAGACG +
Preference number: 6 (lower is better)
Translates to: LGANRACQGLYF*CSRSFRAFLKT
Trigger: CGTCTTCAGAAAAGCCCTGAAGCTTCTAGAACACAAGAAATAGAGTCCCTGGCAAGCTCTGTTGGCGCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 72 bp TGTCTCAGACTGGGCTTGCTCTTGTATGGTTTCTGTTaGTTCACGACACTGGGTAAGCTCAACGTCCTTGGC +
Preference number: 6 (lower is better)
Translates to: CLRLGLLLYGFC*FTTLGKLNVLG
Trigger: GCCAAGGACGTTGAGCTTACCCAGTGTCGTGAACAAACAGAAACCATACAAGAGCAAGCCCAGTCTGAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 72 bp ACAGAATCTGCCAATTCAGGAATGGAGGATCCCTCTTaGCATCTCAGACACTGGGTCATCTCCTTCAGGGTC +
Preference number: 6 (lower is better)
Translates to: TESANSGMEDPS*HLRHWVISFRV
Trigger: GACCCTGAAGGAGATGACCCAGTGTCTGAGATGCAAAGAGGGATCCTCCATTCCTGAATTGGCAGATTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 72 bp CGACTGCTTCTGCTGCATACTGCAGTCCAGGAGTTCTaGGCTGCTTTTCTCAGTTCCTTGTTCTCTTTCCAG +
Preference number: 6 (lower is better)
Translates to: RLLLLHTAVQEF*AAFLSSLFSFQ
Trigger: CTGGAAAGAGAACAAGGAACTGAGAAAAGCAGCCAAGAACTCCTGGACTGCAGTATGCAGCAGAAGCAGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 90 bp TCCTCTTCCACCCGGCGTTGGTCTGACTCTAGCTCCTGCAGTCTGTaGTTCATACATAACACCTCCTGCTCAAGATGCTCTATAATATCG +
Preference number: 6 (lower is better)
Translates to: SSSTRRWSDSSSCSL*FIHNTSCSRCSIIS
Trigger: CGATATTATAGAGCATCTTGAGCAGGAGGTGTTATGTATGAACAACAGACTGCAGGAGCTAGAGTCAGACCAACGCCGGGTGGAAGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000238634.2
CDS TCA 72 bp GGACTGAGCTCCTTGCTCAGAGGAGGAGTCATCAAGTaGAAATTCTTCTTCCTCCGAGCTACATTCATCTGC +
Preference number: 6 (lower is better)
Translates to: GLSSLLRGGVIK*KFFFLRATFIC
Trigger: GCAGATGAATGTAGCTCGGAGGAAGAAGAATTTTCACTTGATGACTCCTCCTCTGAGCAAGGAGCTCAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 72 bp CTGACTTTTCTCCCAGAACTACGCCAAGCTCTCCCTTaGGTTCCTCCTTTTGAGCATGAGTCTCCTGTAATC +
Preference number: 6 (lower is better)
Translates to: LTFLPELRQALP*VPPFEHESPVI
Trigger: GATTACAGGAGACTCATGCTCAAAAGGAGGAACTCAAGGGAGAGCTTGGCGTAGTTCTGGGAGAAAAGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000143365.8
CDS TCA 72 bp TGCAGCCTTAGATCATCCTGCTCGGCTTTGAGGGCATaGAGCTCTTGCTGGAGTTTTTCACTTTCACATGGT +
Preference number: 6 (lower is better)
Translates to: CSLRSSCSALRA*SSCWSFSLSHG
Trigger: ACCATGTGAAAGTGAAAAACTCCAGCAAGAGCTTCATGCCCTCAAAGCCGAGCAGGATGATCTAAGGCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 72 bp TGTTTCAAACTGCTGCAGGCTTTCTGGGCTACATGCTaGAGTTTTGAAGCCACATGCTGGAGTGTCTGTCTG +
Preference number: 6 (lower is better)
Translates to: CFKLLQAFWATC*SFEATCWSVCL
Trigger: CAGACAGACACTCCAGCATGTGGCTTCAAAACTTCAGCATGTAGCCCAGAAAGCCTGCAGCAGTTTGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147629.2
CDS GCA 72 bp TTTCCTCTGAACACTTCCGCTCGTTCTGCTGAGAGTTaGCCAGTTCTAGTTTCAGGCTTTGGATCTCCTGAT +
Preference number: 6 (lower is better)
Translates to: FPLNTSARSAES*PVLVSGFGSPD
Trigger: ATCAGGAGATCCAAAGCCTGAAACTAGAACTGGGCAACTCTCAGCAGAACGAGCGGAAGTGTTCAGAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000143365.8
CDS GCA 72 bp CATCTGTTGCATGTGGGCCTGCCTCAACATTTCTGTTaGCTGCTGGTGTTCTTCATATTGTCGCACAAGTTC +
Preference number: 6 (lower is better)
Translates to: HLLHVGLPQHFC*LLVFFILSHKF
Trigger: GAACTTGTGCGACAATATGAAGAACACCAGCAGGCAACAGAAATGTTGAGGCAGGCCCACATGCAACAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 72 bp TTCCTCTGTGACTTTGGACCAAATGCTGTCATGTGTTaGTATGGCAGTTCCAGGATAGGAGGGTATGGACTC +
Preference number: 6 (lower is better)
Translates to: FLCDFGPNAVMC*YGSSRIGGYGL
Trigger: GAGTCCATACCCTCCTATCCTGGAACTGCCATAGCAACACATGACAGCATTTGGTCCAAAGTCACAGAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 72 bp GCATCTTCTGGCTGCAGATTGTCACTGCCTAGCTCATaGACAGTCATGTGGACACTTTCCTTAGGTAGACTT +
Preference number: 6 (lower is better)
Translates to: ASSGCRLSLPSS*TVMWTLSLGRL
Trigger: AAGTCTACCTAAGGAAAGTGTCCACATGACTGTGCATGAGCTAGGCAGTGACAATCTGCAGCCAGAAGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CCA 72 bp ATTTCTAGTCCGATCATCAGTGAAGTTCCAGGTGGCTaGCTCATTCAGATTCTGATCCACAAGGCCTCTGCT +
Preference number: 6 (lower is better)
Translates to: ISSPIISEVPGG*LIQILIHKASA
Trigger: AGCAGAGGCCTTGTGGATCAGAATCTGAATGAGCCAGCCACCTGGAACTTCACTGATGATCGGACTAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 72 bp GAGGTCCTCCTCCTTTTTCTGATAATCTTGCAGCTGTaGCTGTTGAGTGAAGATCTGTCGTTTGGCCTGCAG +
Preference number: 6 (lower is better)
Translates to: EVLLLFLIILQL*LLSEDLSFGLQ
Trigger: CTGCAGGCCAAACGACAGATCTTCACTCAACAGCAACAGCTGCAAGATTATCAGAAAAAGGAGGAGGACCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000143365.8
CDS CAA 72 bp TCTCTGCTTTTCTCACTCGCAGGCAGAGAAGACACCTaGCTCTCAAGACTGACATCTGTGCTCTGTAAAGCA +
Preference number: 6 (lower is better)
Translates to: SLLFSLAGREDT*LSRLTSVLCKA
Trigger: TGCTTTACAGAGCACAGATGTCAGTCTTGAGAGCAAGGTGTCTTCTCTGCCTGCGAGTGAGAAAAGCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000133952.2
CDS CAA 72 bp CCATCTGTTGCATGTGGGCCTGCCTCAACATTTCTGTaGCCTGCTGGTGTTCTTCATATTGTCGCACAAGTT +
Preference number: 6 (lower is better)
Translates to: PSVACGPASTFL*PAGVLHIVAQV
Trigger: AACTTGTGCGACAATATGAAGAACACCAGCAGGCAACAGAAATGTTGAGGCAGGCCCACATGCAACAGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 72 bp CTTCTGAAGCCTGTCTGTCTCAGACTGGGCTTGCTCTaGTATGGTTTCTGTTTGTTCACGACACTGGGTAAG +
Preference number: 6 (lower is better)
Translates to: LLKPVCLRLGLL*YGFCLFTTLGK
Trigger: CTTACCCAGTGTCGTGAACAAACAGAAACCATACAAGAGCAAGCCCAGTCTGAGACAGACAGGCTTCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 72 bp GAGCTTCTTCTGAAGCCTGTCTGTCTCAGACTGGGCTaGCTCTTGTATGGTTTCTGTTTGTTCACGACACTG +
Preference number: 6 (lower is better)
Translates to: ELLLKPVCLRLG*LLYGFCLFTTL
Trigger: CAGTGTCGTGAACAAACAGAAACCATACAAGAGCAAGCCCAGTCTGAGACAGACAGGCTTCAGAAGAAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 72 bp AATCTGCTGATGTTTCCCCTTCTTCTCGGCCTTCTATaGCTGTATCAAATCCCTGGCTTTGACCCCAGTCTG +
Preference number: 6 (lower is better)
Translates to: NLLMFPLLLGLL*LYQIPGFDPSL
Trigger: CAGACTGGGGTCAAAGCCAGGGATTTGATACAGCAATAGAAGGCCGAGAAGAAGGGGAAACATCAGCAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 72 bp ATGCCTGGACTCAGTCCAAATCCATCCCTGTTAATATaGATGGAGCTAGTACTTGTCACTTGCTGCCACCGC +
Preference number: 6 (lower is better)
Translates to: MPGLSPNPSLLI*MELVLVTCCHR
Trigger: GCGGTGGCAGCAAGTGACAAGTACTAGCTCCATCAATATTAACAGGGATGGATTTGGACTGAGTCCAGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 72 bp ACCGAGGATAGTCCAGATCAAATCTTGAACGGTACATaGTGTGTCTTGGTTCTCCATAGAGCTGCAGCCCAC +
Preference number: 6 (lower is better)
Translates to: TEDSPDQILNGT*CVLVLHRAAAH
Trigger: GTGGGCTGCAGCTCTATGGAGAACCAAGACACACAATGTACCGTTCAAGATTTGATCTGGACTATCCTCGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 90 bp GTAAGAGAGACCGAGGATAGTCCAGATCAAATCTTGAACGGTACATaGTGTGTCTTGGTTCTCCATAGAGCTGCAGCCCACCAGGAGAAT +
Preference number: 6 (lower is better)
Translates to: VRETEDSPDQILNGT*CVLVLHRAAAHQEN
Trigger: ATTCTCCTGGTGGGCTGCAGCTCTATGGAGAACCAAGACACACAATGTACCGTTCAAGATTTGATCTGGACTATCCTCGGTCTCTCTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 90 bp ACCGAGGATAGTCCAGATCAAATCTTGAACGGTACATTGTGTGTCTaGGTTCTCCATAGAGCTGCAGCCCACCAGGAGAATGATAGAATG +
Preference number: 6 (lower is better)
Translates to: TEDSPDQILNGTLCV*VLHRAAAHQENDRM
Trigger: CATTCTATCATTCTCCTGGTGGGCTGCAGCTCTATGGAGAACCAAGACACACAATGTACCGTTCAAGATTTGATCTGGACTATCCTCGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 72 bp TCTAAAACCAGCTTTTCAGCAGTCACCTTGTCCAGCTaGTGTTTAAAGCTCTCCTCATCTTCTGGGAGGGTC +
Preference number: 6 (lower is better)
Translates to: SKTSFSAVTLSS*CLKLSSSSGRV
Trigger: GACCCTCCCAGAAGATGAGGAGAGCTTTAAACATCAGCTGGACAAGGTGACTGCTGAAAAGCTGGTTTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 72 bp TGTCCCGACCTGGCCTTTTCCTTTTCCAAAGCCCACTaGAGCTCTAATGAATTCTTCTGTTCCCTTGCTAAT +
Preference number: 6 (lower is better)
Translates to: CPDLAFSFSKAH*SSNEFFCSLAN
Trigger: ATTAGCAAGGGAACAGAAGAATTCATTAGAGCTGCAGTGGGCTTTGGAAAAGGAAAAGGCCAGGTCGGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CCA 72 bp GACCTGAATGCTTCTAATTCCTTTAGGCGCTTATGCTaGGCCTTGAGTGTTGTTCCCAATTCCAGTTTTGCC +
Preference number: 6 (lower is better)
Translates to: DLNASNSFRRLC*ALSVVPNSSFA
Trigger: GGCAAAACTGGAATTGGGAACAACACTCAAGGCCCAGCATAAGCGCCTAAAGGAATTAGAAGCATTCAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 72 bp CTGCGCTTGGAGGTCCTCCTCCTTTTTCTGATAATCTaGCAGCTGTTGCTGTTGAGTGAAGATCTGTCGTTT +
Preference number: 6 (lower is better)
Translates to: LRLEVLLLFLII*QLLLLSEDLSF
Trigger: AAACGACAGATCTTCACTCAACAGCAACAGCTGCAAGATTATCAGAAAAAGGAGGAGGACCTCCAAGCGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000143365.8
CDS CAA 72 bp AGCGCTCTCAGCTTGCTCTCATATTCCAATGCCTGCTaGGTCTGTGTGGCCTCTAAATCATCTCTTATCTTG +
Preference number: 6 (lower is better)
Translates to: SALSLLSYSNAC*VCVASKSSLIL
Trigger: CAAGATAAGAGATGATTTAGAGGCCACACAGACCAAGCAGGCATTGGAATATGAGAGCAAGCTGAGAGCGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 72 bp ACTTTCACATGGTTCAACTGTCGCATGAGACGGTTTTaGTGCTCTTGTTGGCAAGAGCAACTGTTCTCTCCC +
Preference number: 6 (lower is better)
Translates to: TFTWFNCRMRRF*CSCWQEQLFSP
Trigger: GGGAGAGAACAGTTGCTCTTGCCAACAAGAGCACAAAAACCGTCTCATGCGACAGTTGAACCATGTGAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 72 bp AGTCCAGATCAAATCTTGAACGGTACATTGTGTGTCTaGGTTCTCCATAGAGCTGCAGCCCACCAGGAGAAT +
Preference number: 6 (lower is better)
Translates to: SPDQILNGTLCV*VLHRAAAHQEN
Trigger: ATTCTCCTGGTGGGCTGCAGCTCTATGGAGAACCAAGACACACAATGTACCGTTCAAGATTTGATCTGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 90 bp GAGCTGGCACTGGTGCATTTTATGAAGTTCGTCGATCTTTTTCTGTaGAGCGGAAATGAGCTCATCTTTAAGGCTGCAAAGAGCTTCCTC +
Preference number: 6 (lower is better)
Translates to: ELALVHFMKFVDLFL*SGNELIFKAAKSFL
Trigger: GAGGAAGCTCTTTGCAGCCTTAAAGATGAGCTCATTTCCGCTCAACAGAAAAAGATCGACGAACTTCATAAAATGCACCAGTGCCAGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 90 bp TTTCAGCCAGTAAACTCCTCCTATCTGCTTTCTGCAGGCAGTCCATaGCTGTGTGATATTCAATGCCCTGCTCTTGTATTCTCTGTTCCA +
Preference number: 6 (lower is better)
Translates to: FQPVNSSYLLSAGSP*LCDIQCPALVFSVP
Trigger: TGGAACAGAGAATACAAGAGCAGGGCATTGAATATCACACAGCAATGGACTGCCTGCAGAAAGCAGATAGGAGGAGTTTACTGGCTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 90 bp TATTCTGCAATGGTAAGAGAGACCGAGGATAGTCCAGATCAAATCTaGAACGGTACATTGTGTGTCTTGGTTCTCCATAGAGCTGCAGCC +
Preference number: 6 (lower is better)
Translates to: YSAMVRETEDSPDQI*NGTLCVLVLHRAAA
Trigger: GGCTGCAGCTCTATGGAGAACCAAGACACACAATGTACCGTTCAAGATTTGATCTGGACTATCCTCGGTCTCTCTTACCATTGCAGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 72 bp TCTTCTGGAGTTCTTCAACTGTCCTCATTAGCTCTTTaGTTTCCTCTGAACACTTCCGCTCGTTCTGCTGAG +
Preference number: 6 (lower is better)
Translates to: SSGVLQLSSLAL*FPLNTSARSAE
Trigger: CTCAGCAGAACGAGCGGAAGTGTTCAGAGGAAATCAAAGAGCTAATGAGGACAGTTGAAGAACTCCAGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000143365.8
CDS TCA 72 bp AGCAGCTCACTGCACCTGTCTGTTTTCTCTTTCAAGTaGTTAGTTAACTGTTCAACCTCTCTGGCTTGGTGC +
Preference number: 6 (lower is better)
Translates to: SSSLHLSVFSFK*LVNCSTSLAWC
Trigger: GCACCAAGCCAGAGAGGTTGAACAGTTAACTAATCACTTGAAAGAGAAAACAGACAGGTGCAGTGAGCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 72 bp ATGTGCGTCATTACCTGGTTGGTGGTTTCTACTTGTTaGTCTAAAACCAGCTTTTCAGCAGTCACCTTGTCC +
Preference number: 6 (lower is better)
Translates to: MCVITWLVVSTC*SKTSFSAVTLS
Trigger: GGACAAGGTGACTGCTGAAAAGCTGGTTTTAGAGCAACAAGTAGAAACCACCAACCAGGTAATGACGCACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 72 bp TCCGACCTGAATGCTTCTAATTCCTTTAGGCGCTTATaGTGGGCCTTGAGTGTTGTTCCCAATTCCAGTTTT +
Preference number: 6 (lower is better)
Translates to: SDLNASNSFRRL*WALSVVPNSSF
Trigger: AAAACTGGAATTGGGAACAACACTCAAGGCCCAGCATAAGCGCCTAAAGGAATTAGAAGCATTCAGGTCGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CCA 72 bp TTCTTCTTCTGTTTCTTCGGAATGTCCCCATCATATTaGGCTTTTCTTTGTCGAAACCGAGCAAGCTTCGCC +
Preference number: 6 (lower is better)
Translates to: FFFCFFGMSPSY*AFLCRNRASFA
Trigger: GGCGAAGCTTGCTCGGTTTCGACAAAGAAAAGCCCAATATGATGGGGACATTCCGAAGAAACAGAAGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000143365.8
CDS CCA 72 bp GGCATGAAGCTCTTGCTGGAGTTTTTCACTTTCACATaGTTCAACTGTCGCATGAGACGGTTTTTGTGCTCT +
Preference number: 6 (lower is better)
Translates to: GMKLLLEFFTFT*FNCRMRRFLCS
Trigger: AGAGCACAAAAACCGTCTCATGCGACAGTTGAACCATGTGAAAGTGAAAAACTCCAGCAAGAGCTTCATGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CCA 72 bp CACTCTCTTAGACAGCTTCCACAGTACACTGGTTTCTaGGCACCAGATCCTTTAAACACCACAGAATCAATG +
Preference number: 6 (lower is better)
Translates to: HSLRQLPQYTGF*APDPLNTTESM
Trigger: CATTGATTCTGTGGTGTTTAAAGGATCTGGTGCCCAGAAACCAGTGTACTGTGGAAGCTGTCTAAGAGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 72 bp CTTCTTCTTCTGTTTCTTCGGAATGTCCCCATCATATaGGGCTTTTCTTTGTCGAAACCGAGCAAGCTTCGC +
Preference number: 6 (lower is better)
Translates to: LLLLFLRNVPII*GFSLSKPSKLR
Trigger: GCGAAGCTTGCTCGGTTTCGACAAAGAAAAGCCCAATATGATGGGGACATTCCGAAGAAACAGAAGAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000143365.8
CDS CAA 72 bp ATGGTTCAACTGTCGCATGAGACGGTTTTTGTGCTCTaGTTGGCAAGAGCAACTGTTCTCTCCCACTTTCTT +
Preference number: 6 (lower is better)
Translates to: MVQLSHETVFVL*LARATVLSHFL
Trigger: AAGAAAGTGGGAGAGAACAGTTGCTCTTGCCAACAAGAGCACAAAAACCGTCTCATGCGACAGTTGAACCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 72 bp GTAAACTCCTCCTATCTGCTTTCTGCAGGCAGTCCATaGCTGTGTGATATTCAATGCCCTGCTCTTGTATTC +
Preference number: 6 (lower is better)
Translates to: VNSSYLLSAGSP*LCDIQCPALVF
Trigger: GAATACAAGAGCAGGGCATTGAATATCACACAGCAATGGACTGCCTGCAGAAAGCAGATAGGAGGAGTTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 90 bp TGTTCCTTCTCTTGCTTTAAGGCTCTGACCTCTGCACTTAGAGAATaGATGGTACAATGGGTCTGCTTTAGTTGTTCAGAAAGGCCAGAG +
Preference number: 6 (lower is better)
Translates to: CSFSCFKALTSALRE*MVQWVCFSCSERPE
Trigger: CTCTGGCCTTTCTGAACAACTAAAGCAGACCCATTGTACCATCAATTCTCTAAGTGCAGAGGTCAGAGCCTTAAAGCAAGAGAAGGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 72 bp TGGAGTTTTTCACTTTCACATGGTTCAACTGTCGCATaGGACGGTTTTTGTGCTCTTGTTGGCAAGAGCAAC +
Preference number: 6 (lower is better)
Translates to: WSFSLSHGSTVA*DGFCALVGKSN
Trigger: GTTGCTCTTGCCAACAAGAGCACAAAAACCGTCTCATGCGACAGTTGAACCATGTGAAAGTGAAAAACTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 72 bp AATGTCTTGTCTTTTAACGTCTGTTCCTCAACTTCCTaGTCGTCATGTCCATCCTGTGTTTGCGTACTGCTG +
Preference number: 6 (lower is better)
Translates to: NVLSFNVCSSTS*SSCPSCVCVLL
Trigger: CAGCAGTACGCAAACACAGGATGGACATGACGATCAGGAAGTTGAGGAACAGACGTTAAAAGACAAGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 72 bp TCCTTCAGCTGTTTCTCCAATTGTTCAGTTTTAAGTTaGAACTCCTGGACTTCCTGCTCAAGGGTACCTTTC +
Preference number: 6 (lower is better)
Translates to: SFSCFSNCSVLS*NSWTSCSRVPF
Trigger: GAAAGGTACCCTTGAGCAGGAAGTCCAGGAGTTGCAACTTAAAACTGAACAATTGGAGAAACAGCTGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 72 bp AAGGACTCTCTTCTCCTCTTTGAGAATGTTGTTCTCTaGGTCCAGCTGTGCACATTTTTCTTGAAGGTCATC +
Preference number: 6 (lower is better)
Translates to: KDSLLLFENVVL*VQLCTFFLKVI
Trigger: GATGACCTTCAAGAAAAATGTGCACAGCTGGACGCAGAGAACAACATTCTCAAAGAGGAGAAGAGAGTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 72 bp GCCTGCTGGTGTTCTTCATATTGTCGCACAAGTTCTTaGCGCATATCTTCCAACTGTTCATTTAAGATGAGC +
Preference number: 6 (lower is better)
Translates to: ACWCSSYCRTSS*RISSNCSFKMS
Trigger: GCTCATCTTAAATGAACAGTTGGAAGATATGCGGCAAGAACTTGTGCGACAATATGAAGAACACCAGCAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 72 bp ATCCAAATAAATGCATCATCACCGGCTGTTTCAAACTaGTGCAGGCTTTCTGGGCTACATGCTGAAGTTTTG +
Preference number: 6 (lower is better)
Translates to: IQINASSPAVSN*CRLSGLHAEVL
Trigger: CAAAACTTCAGCATGTAGCCCAGAAAGCCTGCAGCAGTTTGAAACAGCCGGTGATGATGCATTTATTTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147629.2
CDS CCA 72 bp TACTTTGATAAGCAACAGAATCTGCCAATTCAGGAATaGAGGATCCCTCTTTGCATCTCAGACACTGGGTCA +
Preference number: 6 (lower is better)
Translates to: YFDKQQNLPIQE*RIPLCISDTGS
Trigger: TGACCCAGTGTCTGAGATGCAAAGAGGGATCCTCCATTCCTGAATTGGCAGATTCTGTTGCTTATCAAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CCA 72 bp ACTGTCATCCAAATGTTCACACAGAGGATAAGGATATaGCAGAGGCACTCGAGATTCAACTTCATAGACGTC +
Preference number: 6 (lower is better)
Translates to: TVIQMFTQRIRI*QRHSRFNFIDV
Trigger: GACGTCTATGAAGTTGAATCTCGAGTGCCTCTGCCATATCCTTATCCTCTGTGTGAACATTTGGATGACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238634.2
CDS CAA 72 bp CTCCTTCAGCTGTTTCTCCAATTGTTCAGTTTTAAGTaGCAACTCCTGGACTTCCTGCTCAAGGGTACCTTT +
Preference number: 6 (lower is better)
Translates to: LLQLFLQLFSFK*QLLDFLLKGTF
Trigger: AAAGGTACCCTTGAGCAGGAAGTCCAGGAGTTGCAACTTAAAACTGAACAATTGGAGAAACAGCTGAAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 72 bp CCAGAGACTTTCTCTGAGAGCTCCAACTTTTCTCGCTaGGTTACTTCTAGCTTCTCCATAAGCTCTGTTGTA +
Preference number: 6 (lower is better)
Translates to: PETFSESSNFSR*VTSSFSISSVV
Trigger: TACAACAGAGCTTATGGAGAAGCTAGAAGTAACCAAGCGAGAAAAGTTGGAGCTCTCAGAGAAAGTCTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 90 bp ATCTTCCTTCTCCTTCAGCTGTTTCTCCAATTGTTCAGTTTTAAGTaGCAACTCCTGGACTTCCTGCTCAAGGGTACCTTTCTCCTTTTC +
Preference number: 6 (lower is better)
Translates to: IFLLLQLFLQLFSFK*QLLDFLLKGTFLLF
Trigger: GAAAAGGAGAAAGGTACCCTTGAGCAGGAAGTCCAGGAGTTGCAACTTAAAACTGAACAATTGGAGAAACAGCTGAAGGAGAAGGAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 90 bp CTCTTTGAGAATGTTGTTCTCTGCGTCCAGCTGTGCACATTTTTCTaGAAGGTCATCTTCCTTCTCCTTCAGCTGTTTCTCCAATTGTTC +
Preference number: 6 (lower is better)
Translates to: LFENVVLCVQLCTFF*KVIFLLLQLFLQLF
Trigger: GAACAATTGGAGAAACAGCTGAAGGAGAAGGAAGATGACCTTCAAGAAAAATGTGCACAGCTGGACGCAGAGAACAACATTCTCAAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 90 bp GAGTTTTTCACTTTCACATGGTTCAACTGTCGCATGAGACGGTTTTaGTGCTCTTGTTGGCAAGAGCAACTGTTCTCTCCCACTTTCTTT +
Preference number: 6 (lower is better)
Translates to: EFFTFTWFNCRMRRF*CSCWQEQLFSPTFF
Trigger: AAAGAAAGTGGGAGAGAACAGTTGCTCTTGCCAACAAGAGCACAAAAACCGTCTCATGCGACAGTTGAACCATGTGAAAGTGAAAAACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 90 bp TTGGAAATAAATCTGCTGATGTTTCCCCTTCTTCTCGGCCTTCTATaGCTGTATCAAATCCCTGGCTTTGACCCCAGTCTGATTCAGAAT +
Preference number: 6 (lower is better)
Translates to: LEINLLMFPLLLGLL*LYQIPGFDPSLIQN
Trigger: ATTCTGAATCAGACTGGGGTCAAAGCCAGGGATTTGATACAGCAATAGAAGGCCGAGAAGAAGGGGAAACATCAGCAGATTTATTTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 90 bp TCTTCCCTTAACGGATCTGTAGGCTTTCTTGGTTTCATCACAGAATaGCAGCCATTAATCTCCGAGCTACATTCATCTGCAGTGGTAGAA +
Preference number: 6 (lower is better)
Translates to: SSLNGSVGFLGFITE*QPLISELHSSAVVE
Trigger: TTCTACCACTGCAGATGAATGTAGCTCGGAGATTAATGGCTGCAATTCTGTGATGAAACCAAGAAAGCCTACAGATCCGTTAAGGGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143365.8
CDS TCA 72 bp GCTTGGTCTGTGTGGCCTCTAAATCATCTCTTATCTTaGGCAGACAAGTATACTCCCTCTGTAACTCTTGAT +
Preference number: 6 (lower is better)
Translates to: AWSVWPLNHLLS*ADKYTPSVTLD
Trigger: ATCAAGAGTTACAGAGGGAGTATACTTGTCTGCTCAAGATAAGAGATGATTTAGAGGCCACACAGACCAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 72 bp TGTATTAGCTGTGCAAATTTGCCAAACAGCATGGGCTaGTCCCGAGTAGATACAGAATCAGATTCCTTCATG +
Preference number: 6 (lower is better)
Translates to: CISCANLPNSMG*SRVDTESDSFM
Trigger: CATGAAGGAATCTGATTCTGTATCTACTCGGGATCAGCCCATGCTGTTTGGCAAATTTGCACAGCTAATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 72 bp TCTATTTCTTGTGTTCTAGAAGCTTCAGGGCTTTTCTaGAGACGCGTAAGGGAGGTCTGTTTTTCTAGAGGT +
Preference number: 6 (lower is better)
Translates to: SISCVLEASGLF*RRVREVCFSRG
Trigger: ACCTCTAGAAAAACAGACCTCCCTTACGCGTCTTCAGAAAAGCCCTGAAGCTTCTAGAACACAAGAAATAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 72 bp ACCTCTGCACTTAGAGAATTGATGGTACAATGGGTCTaGTTTAGTTGTTCAGAAAGGCCAGAGACTTTCTCT +
Preference number: 6 (lower is better)
Translates to: TSALRELMVQWV*FSCSERPETFS
Trigger: AGAGAAAGTCTCTGGCCTTTCTGAACAACTAAAGCAGACCCATTGTACCATCAATTCTCTAAGTGCAGAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 72 bp CTTTCTGCAGGCAGTCCATTGCTGTGTGATATTCAATaGCCTGCTCTTGTATTCTCTGTTCCAAAGAGTTTA +
Preference number: 6 (lower is better)
Translates to: LSAGSPLLCDIQ*PALVFSVPKSL
Trigger: TAAACTCTTTGGAACAGAGAATACAAGAGCAGGGCATTGAATATCACACAGCAATGGACTGCCTGCAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 72 bp TCCCTGTTAATATTGATGGAGCTAGTACTTGTCACTTaGTGCCACCGCCGCACCAAAAATTTCATTCTTGAA +
Preference number: 6 (lower is better)
Translates to: SLLILMELVLVT*CHRRTKNFILE
Trigger: TTCAAGAATGAAATTTTTGGTGCGGCGGTGGCAGCAAGTGACAAGTACTAGCTCCATCAATATTAACAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 72 bp CTCTCCTCTTGTTCCGAAGGACTGTACATTTTCAACTaGTCTTCAAGGACTCTCTTCTCCTCTTTGAGAATG +
Preference number: 6 (lower is better)
Translates to: LSSCSEGLYIFN*SSRTLFSSLRM
Trigger: CATTCTCAAAGAGGAGAAGAGAGTCCTTGAAGACAAGTTGAAAATGTACAGTCCTTCGGAACAAGAGGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 72 bp TTTGCGGCATTCTTCCGTCACTTTACCAAGAAGGACTaGCATGCTCTCTTGAAAGTCTTGAACTTCGTATCT +
Preference number: 6 (lower is better)
Translates to: FAAFFRHFTKKD*HALLKVLNFVS
Trigger: AGATACGAAGTTCAAGACTTTCAAGAGAGCATGCAAGTCCTTCTTGGTAAAGTGACGGAAGAATGCCGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 72 bp AACGGATCTGTAGGCTTTCTTGGTTTCATCACAGAATaGCAGCCATTAATCTCCGAGCTACATTCATCTGCA +
Preference number: 6 (lower is better)
Translates to: NGSVGFLGFITE*QPLISELHSSA
Trigger: TGCAGATGAATGTAGCTCGGAGATTAATGGCTGCAATTCTGTGATGAAACCAAGAAAGCCTACAGATCCGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143365.8
CDS CAA 90 bp TCAGAAAGGCCAGAGACTTTCTCTGAGAGCTCCAACTTTTCTCGCTaGGTTACTTCTAGCTTCTCCATAAGCTCTGTTGTATCTTTTTCT +
Preference number: 6 (lower is better)
Translates to: SERPETFSESSNFSR*VTSSFSISSVVSFS
Trigger: AGAAAAAGATACAACAGAGCTTATGGAGAAGCTAGAAGTAACCAAGCGAGAAAAGTTGGAGCTCTCAGAGAAAGTCTCTGGCCTTTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 72 bp AGAGAGTTCCGTCTGTTGAGCAAATGCTATACTCATTaGTACGATGACCTTAGCTATTTCTTCTTCCAGTCG +
Preference number: 6 (lower is better)
Translates to: REFRLLSKCYTH*YDDLSYFFFQS
Trigger: CGACTGGAAGAAGAAATAGCTAAGGTCATCGTATCAATGAGTATAGCATTTGCTCAACAGACGGAACTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 72 bp TATTGCTGTATCAAATCCCTGGCTTTGACCCCAGTCTaGTTCAGAATCACTGGAATAGACTTCTCTACTTTG +
Preference number: 6 (lower is better)
Translates to: YCCIKSLALTPV*FRITGIDFSTL
Trigger: CAAAGTAGAGAAGTCTATTCCAGTGATTCTGAATCAGACTGGGGTCAAAGCCAGGGATTTGATACAGCAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 72 bp GGCATTCTTCCGTCACTTTACCAAGAAGGACTTGCATaGTCTCTTGAAAGTCTTGAACTTCGTATCTATACT +
Preference number: 6 (lower is better)
Translates to: GILPSLYQEGLA*SLESLELRIYT
Trigger: AGTATAGATACGAAGTTCAAGACTTTCAAGAGAGCATGCAAGTCCTTCTTGGTAAAGTGACGGAAGAATGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 72 bp GGAATAGACTTCTCTACTTTGATAAGCAACAGAATCTaGCAATTCAGGAATGGAGGATCCCTCTTTGCATCT +
Preference number: 6 (lower is better)
Translates to: GIDFSTLISNRI*QFRNGGSLFAS
Trigger: AGATGCAAAGAGGGATCCTCCATTCCTGAATTGGCAGATTCTGTTGCTTATCAAAGTAGAGAAGTCTATTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS GCA 72 bp CTGTTAATATTGATGGAGCTAGTACTTGTCACTTGCTaGCACCGCCGCACCAAAAATTTCATTCTTGAAATC +
Preference number: 6 (lower is better)
Translates to: LLILMELVLVTC*HRRTKNFILEI
Trigger: GATTTCAAGAATGAAATTTTTGGTGCGGCGGTGGCAGCAAGTGACAAGTACTAGCTCCATCAATATTAACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CCA 72 bp TCCACATCTCTAGTGCTGAGAGATGTCAGCTCAGTTTaGAATGTAGCTAGTAAAACACTACGTTCCTTTATG +
Preference number: 6 (lower is better)
Translates to: STSLVLRDVSSV*NVASKTLRSFM
Trigger: CATAAAGGAACGTAGTGTTTTACTAGCTACATTCCAAACTGAGCTGACATCTCTCAGCACTAGAGATGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 72 bp CTGGTGCATTTTATGAAGTTCGTCGATCTTTTTCTGTaGAGCGGAAATGAGCTCATCTTTAAGGCTGCAAAG +
Preference number: 6 (lower is better)
Translates to: LVHFMKFVDLFL*SGNELIFKAAK
Trigger: CTTTGCAGCCTTAAAGATGAGCTCATTTCCGCTCAACAGAAAAAGATCGACGAACTTCATAAAATGCACCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 72 bp TGGCGGCCAATTGTTTCTTCAGCAGCTGATGTTGTCTaGACAACCTCTAACAAGATCTTCAGAAGTCTATTA +
Preference number: 6 (lower is better)
Translates to: WRPIVSSAADVV*TTSNKIFRSLL
Trigger: TAATAGACTTCTGAAGATCTTGTTAGAGGTTGTCAAGACAACATCAGCTGCTGAAGAAACAATTGGCCGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 90 bp CCAAGAACATGGCGGCCAATTGTTTCTTCAGCAGCTGATGTTGTCTaGACAACCTCTAACAAGATCTTCAGAAGTCTATTATTAGCTTTT +
Preference number: 6 (lower is better)
Translates to: PRTWRPIVSSAADVV*TTSNKIFRSLLLAF
Trigger: AAAAGCTAATAATAGACTTCTGAAGATCTTGTTAGAGGTTGTCAAGACAACATCAGCTGCTGAAGAAACAATTGGCCGCCATGTTCTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 90 bp ATGTTCTCGCTCACTCATCAAACGTTCAATCTGGGTTTCCAGATCTaGTATCTGTTCCTTTTGTTCTTCAATGACCTTGTTATCCGTTGT +
Preference number: 6 (lower is better)
Translates to: MFSLTHQTFNLGFQI*YLFLLFFNDLVIRC
Trigger: ACAACGGATAACAAGGTCATTGAAGAACAAAAGGAACAGATACAAGATCTGGAAACCCAGATTGAACGTTTGATGAGTGAGCGAGAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CCA 72 bp TTCTCATGTTCTCGCTCACTCATCAAACGTTCAATCTaGGTTTCCAGATCTTGTATCTGTTCCTTTTGTTCT +
Preference number: 6 (lower is better)
Translates to: FSCSRSLIKRSI*VSRSCICSFCS
Trigger: AGAACAAAAGGAACAGATACAAGATCTGGAAACCCAGATTGAACGTTTGATGAGTGAGCGAGAACATGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CCA 72 bp ATTTCTTTAAGGACATTGTTCATGTGCGTCATTACCTaGTTGGTGGTTTCTACTTGTTGCTCTAAAACCAGC +
Preference number: 6 (lower is better)
Translates to: ISLRTLFMCVIT*LVVSTCCSKTS
Trigger: GCTGGTTTTAGAGCAACAAGTAGAAACCACCAACCAGGTAATGACGCACATGAACAATGTCCTTAAAGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 72 bp TCTTTAAGGACATTGTTCATGTGCGTCATTACCTGGTaGGTGGTTTCTACTTGTTGCTCTAAAACCAGCTTT +
Preference number: 6 (lower is better)
Translates to: SLRTLFMCVITW*VVSTCCSKTSF
Trigger: AAAGCTGGTTTTAGAGCAACAAGTAGAAACCACCAACCAGGTAATGACGCACATGAACAATGTCCTTAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 90 bp CATCAAACGTTCAATCTGGGTTTCCAGATCTTGTATCTGTTCCTTTaGTTCTTCAATGACCTTGTTATCCGTTGTGAGTTTAAGTTGCTG +
Preference number: 6 (lower is better)
Translates to: HQTFNLGFQILYLFL*FFNDLVIRCEFKLL
Trigger: CAGCAACTTAAACTCACAACGGATAACAAGGTCATTGAAGAACAAAAGGAACAGATACAAGATCTGGAAACCCAGATTGAACGTTTGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 90 bp AAATTGATTTCTTTAAGGACATTGTTCATGTGCGTCATTACCTGGTaGGTGGTTTCTACTTGTTGCTCTAAAACCAGCTTTTCAGCAGTC +
Preference number: 6 (lower is better)
Translates to: KLISLRTLFMCVITW*VVSTCCSKTSFSAV
Trigger: GACTGCTGAAAAGCTGGTTTTAGAGCAACAAGTAGAAACCACCAACCAGGTAATGACGCACATGAACAATGTCCTTAAAGAAATCAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 90 bp TTGACAACCTCTAACAAGATCTTCAGAAGTCTATTATTAGCTTTTTaGAGAGCGTACCTTTCATTGGACAGGTTTCTATCGAGAAGAGCA +
Preference number: 6 (lower is better)
Translates to: LTTSNKIFRSLLLAF*RAYLSLDRFLSRRA
Trigger: TGCTCTTCTCGATAGAAACCTGTCCAATGAAAGGTACGCTCTCAAAAAAGCTAATAATAGACTTCTGAAGATCTTGTTAGAGGTTGTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 72 bp TTAAGGTGTTCTCCATTTCTCTCTTATGTTGGGATTTaGGCTCCTCTATCTGAGACATGTGCTGATTTATTA +
Preference number: 6 (lower is better)
Translates to: LRCSPFLSYVGI*APLSETCADLL
Trigger: TAATAAATCAGCACATGTCTCAGATAGAGGAGCTCAAATCCCAACATAAGAGAGAAATGGAGAACACCTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000143365.8
CDS TCA 72 bp TGTTCTTCTGACTTTAGTATATCATCAAGGTCATCATaGCTGGACAAAGGAACTGCTTTTCTATATTCGCCT +
Preference number: 6 (lower is better)
Translates to: CSSDFSISSRSS*LDKGTAFLYSP
Trigger: AGGCGAATATAGAAAAGCAGTTCCTTTGTCCAGTCATGATGACCTTGATGATATACTAAAGTCAGAAGAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CCA 72 bp CTTCTGACTTTAGTATATCATCAAGGTCATCATGACTaGACAAAGGAACTGCTTTTCTATATTCGCCTAACT +
Preference number: 6 (lower is better)
Translates to: LLTLVYHQGHHD*TKELLFYIRLT
Trigger: AGTTAGGCGAATATAGAAAAGCAGTTCCTTTGTCCAGTCATGATGACCTTGATGATATACTAAAGTCAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 72 bp GAGTATAGCATTCATCGAAAACATTGTTTAGGGTCTTaGAAATGTGAAAGCATTTCTCAGACACTGCCTGTT +
Preference number: 6 (lower is better)
Translates to: EYSIHRKHCLGS*KCESISQTLPV
Trigger: AACAGGCAGTGTCTGAGAAATGCTTTCACATTTCAAAGACCCTAAACAATGTTTTCGATGAATGCTATACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 90 bp ATTTTAAAGGAGTATAGCATTCATCGAAAACATTGTTTAGGGTCTTaGAAATGTGAAAGCATTTCTCAGACACTGCCTGTTGAAGTCGTT +
Preference number: 6 (lower is better)
Translates to: ILKEYSIHRKHCLGS*KCESISQTLPVEVV
Trigger: AACGACTTCAACAGGCAGTGTCTGAGAAATGCTTTCACATTTCAAAGACCCTAAACAATGTTTTCGATGAATGCTATACTCCTTTAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 72 bp TCTCTTCTTCTACTACTCTTGTATTCAACTCATCAATaGGTGCCTGCTTCTCCTGTATTTCTTTTGCATTTA +
Preference number: 6 (lower is better)
Translates to: SLLLLLLYSTHQ*VPASPVFLLHL
Trigger: TAAATGCAAAAGAAATACAGGAGAAGCAGGCACTCATTGATGAGTTGAATACAAGAGTAGTAGAAGAAGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044492.10
ENSMUST00000143365.8
CDS CAA 72 bp TCTAACAAGATCTTCAGAAGTCTATTATTAGCTTTTTaGAGAGCGTACCTTTCATTGGACAGGTTTCTATCG +
Preference number: 6 (lower is better)
Translates to: SNKIFRSLLLAF*RAYLSLDRFLS
Trigger: CGATAGAAACCTGTCCAATGAAAGGTACGCTCTCAAAAAAGCTAATAATAGACTTCTGAAGATCTTGTTAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS TCA 72 bp ACGATGACCTTAGCTATTTCTTCTTCCAGTCGTTCTTaGTACTGTTTTTCCATCAAGTTAACCATATTTGTT +
Preference number: 6 (lower is better)
Translates to: TMTLAISSSSRS*YCFSIKLTIFV
Trigger: AACAAATATGGTTAACTTGATGGAAAAACAGTATCAAGAACGACTGGAAGAAGAAATAGCTAAGGTCATCGT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10
CDS CAA 72 bp TACGATGACCTTAGCTATTTCTTCTTCCAGTCGTTCTaGATACTGTTTTTCCATCAAGTTAACCATATTTGT +
Preference number: 6 (lower is better)
Translates to: YDDLSYFFFQSF*ILFFHQVNHIC
Trigger: ACAAATATGGTTAACTTGATGGAAAAACAGTATCAAGAACGACTGGAAGAAGAAATAGCTAAGGTCATCGTA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044492.10