Pregenerated sensors for AGBL3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038836Ensembl transcript IDs: ENSMUST00000115009.2, ENSMUST00000115012.8, ENSMUST00000115014.8, ENSMUST00000115016.8, ENSMUST00000115017.8, ENSMUST00000135304.8, ENSMUST00000148834.8
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGTGATCTTCCTGAGTCAGGCTCCTATGCAGATGGGATTGTAGCTTaGACCCTGGGACTGAGTGCTCACCACCTAAGACAAATGTGCAGG | + |
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Preference number: 1 (lower is better) Translates to: CDLPESGSYADGIVA*TLGLSAHHLRQMCR Trigger: CCTGCACATTTGTCTTAGGTGGTGAGCACTCAGTCCCAGGGTGCAAGCTACAATCCCATCTGCATAGGAGCCTGACTCAGGAAGATCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
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| 3UTR TCA 90 bp | ACTTTCAGCCCAGTTAACTGTTCCTGTGAATCTTCAGCTGGAAGGTaGGCAGGCCATCACTCTCACTGGGTTTCTTGCTGGTTTTGGTTA | + |
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Preference number: 1 (lower is better) Translates to: TFSPVNCSCESSAGR*AGHHSHWVSCWFWL Trigger: TAACCAAAACCAGCAAGAAACCCAGTGAGAGTGATGGCCTGCTCACCTTCCAGCTGAAGATTCACAGGAACAGTTAACTGGGCTGAAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
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| 3UTR TCA 90 bp | CTCTCCTGGATGGACCCTTGCAGTCAAAATCACAGCCTTGCGCTTTaGGTCACTAGTCTTCAAGGGAGTAGTTATTGTCAAGACATACAC | + |
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Preference number: 1 (lower is better) Translates to: LSWMDPCSQNHSLAL*VTSLQGSSYCQDIH Trigger: GTGTATGTCTTGACAATAACTACTCCCTTGAAGACTAGTGACTCAAAGCGCAAGGCTGTGATTTTGACTGCAAGGGTCCATCCAGGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135304.8 ENSMUST00000148834.8 |
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| 3UTR TCA 90 bp | CTGAGAGGTCACCTTGAGAAGGTAAGTCTGAGTGTCATTGGACTCTaGGCTGTCAGAGCCTCGACTACTAGACTCTACATCCAAAGAAAT | + |
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Preference number: 1 (lower is better) Translates to: LRGHLEKVSLSVIGL*AVRASTTRLYIQRN Trigger: ATTTCTTTGGATGTAGAGTCTAGTAGTCGAGGCTCTGACAGCTCAGAGTCCAATGACACTCAGACTTACCTTCTCAAGGTGACCTCTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
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| 3UTR TCA 90 bp | TTGCTGAGACTGCTTTTGAACTCACATTATAGTCCAGGCAAGCATTaGGCTTGTGATCTTCCTGAGTCAGGCTCCTATGCAGATGGGATT | + |
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Preference number: 1 (lower is better) Translates to: LLRLLLNSHYSPGKH*ACDLPESGSYADGI Trigger: AATCCCATCTGCATAGGAGCCTGACTCAGGAAGATCACAAGCTCAATGCTTGCCTGGACTATAATGTGAGTTCAAAAGCAGTCTCAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
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| 3UTR CCA 90 bp | ACTGTTGATGCCAGACAGGTATTCTTGAAGGTTGGAGTAAGTGTATaGATAGCAGTGAGCAAAGTAGCACGTATCCTGGCTGTGTGGAAA | + |
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Preference number: 1 (lower is better) Translates to: TVDARQVFLKVGVSV*IAVSKVARILAVWK Trigger: TTTCCACACAGCCAGGATACGTGCTACTTTGCTCACTGCTATCCATACACTTACTCCAACCTTCAAGAATACCTGTCTGGCATCAACAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135304.8 ENSMUST00000148834.8 |
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| 3UTR GCA 90 bp | AGCAGGCTTGGTAAAGTTGACAATAGTGAATCTGTAGACTATTTCTaGTTGGGTATTAGTGACCTGGAAATAGTACCACTGAGTGTGCTT | + |
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Preference number: 1 (lower is better) Translates to: SRLGKVDNSESVDYF*LGISDLEIVPLSVL Trigger: AAGCACACTCAGTGGTACTATTTCCAGGTCACTAATACCCAAGCAGAAATAGTCTACAGATTCACTATTGTCAACTTTACCAAGCCTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135304.8 ENSMUST00000148834.8 |
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| 3UTR GCA 90 bp | TGTAAATTCGTTTCTCATCATCTGTCCAATTCGTCCCAGTCCTCTTaGTTTGGAAAGACGAGCATCTTTTTGCTTTGCTTTTCAACTGGT | + |
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Preference number: 1 (lower is better) Translates to: CKFVSHHLSNSSQSS*FGKTSIFLLCFSTG Trigger: ACCAGTTGAAAAGCAAAGCAAAAAGATGCTCGTCTTTCCAAAGCAAGAGGACTGGGACGAATTGGACAGATGATGAGAAACGAATTTACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
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| 3UTR GCA 90 bp | TCCCATCAGAATTTGATTCATCGTGTCTTTGGAGTAAATGTTCTTTaGCATAAACCTCTTGCATGTTATTCTGGCAGTTTGCTAGGATGG | + |
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Preference number: 1 (lower is better) Translates to: SHQNLIHRVFGVNVL*HKPLACYSGSLLGW Trigger: CCATCCTAGCAAACTGCCAGAATAACATGCAAGAGGTTTATGGCAAAGAACATTTACTCCAAAGACACGATGAATCAAATTCTGATGGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
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| 3UTR CCA 90 bp | GTCTGTCATAAGATTCCTTTGGGCTTTAAAAGGGAGATTTCTGGTTaGTGTCCAAGGTATGCTGTATCTTCTTCTATTTATGCAAGCAGT | + |
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Preference number: 1 (lower is better) Translates to: VCHKIPLGFKREISG*CPRYAVSSSIYASS Trigger: ACTGCTTGCATAAATAGAAGAAGATACAGCATACCTTGGACACCAACCAGAAATCTCCCTTTTAAAGCCCAAAGGAATCTTATGACAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
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| 3UTR TCA 90 bp | ACAAGACACGTATTTTACAAAACTTTGATCTTACTGGGTCACTGTTaGTGCCAGACAGGTATTCTTGAAGGTTGGAGTAAGTGTATGGAT | + |
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Preference number: 1 (lower is better) Translates to: TRHVFYKTLILLGHC*CQTGILEGWSKCMD Trigger: ATCCATACACTTACTCCAACCTTCAAGAATACCTGTCTGGCATCAACAGTGACCCAGTAAGATCAAAGTTTTGTAAAATACGTGTCTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135304.8 ENSMUST00000148834.8 |
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| 3UTR TCA 90 bp | GGAGTAGTTATTGTCAAGACATACACCATATTCCTGGCAAGTGTGTaGCACAAGACACGTATTTTACAAAACTTTGATCTTACTGGGTCA | + |
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Preference number: 1 (lower is better) Translates to: GVVIVKTYTIFLASV*HKTRILQNFDLTGS Trigger: TGACCCAGTAAGATCAAAGTTTTGTAAAATACGTGTCTTGTGTCACACACTTGCCAGGAATATGGTGTATGTCTTGACAATAACTACTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135304.8 ENSMUST00000148834.8 |
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| 3UTR CCA 90 bp | ACTTCCTGGATTGGATTCTTACAAGTTTCTAAAATACATGTCCTATaGTCTTTGTTAAGACTCTTAATCATACGCTGGGAGCTGGACCAT | + |
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Preference number: 1 (lower is better) Translates to: TSWIGFLQVSKIHVL*SLLRLLIIRWELDH Trigger: ATGGTCCAGCTCCCAGCGTATGATTAAGAGTCTTAACAAAGACCATAGGACATGTATTTTAGAAACTTGTAAGAATCCAATCCAGGAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
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| 3UTR TCA 90 bp | AACAGAAAAATAATTAAGAGAATATCTCTGCACTCCTCAGTCTTCTaGGGAGCCAGATTGTTACTTTGCTTATACTCACATAGTCAACTC | + |
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Preference number: 1 (lower is better) Translates to: NRKIIKRISLHSSVF*GARLLLCLYSHSQL Trigger: GAGTTGACTATGTGAGTATAAGCAAAGTAACAATCTGGCTCCTCAGAAGACTGAGGAGTGCAGAGATATTCTCTTAATTATTTTTCTGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
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| 3UTR TCA 90 bp | ATAAAAGAAATACAGGAAATGATGGTGGCTGCTGGCTCATCAAAGTaGCTAATAAGTAAAATCATCACTAGTGCATGTCTTTCCTTTCTT | + |
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Preference number: 1 (lower is better) Translates to: IKEIQEMMVAAGSSK*LISKIITSACLSFL Trigger: AAGAAAGGAAAGACATGCACTAGTGATGATTTTACTTATTAGTCACTTTGATGAGCCAGCAGCCACCATCATTTCCTGTATTTCTTTTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
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| 3UTR CAA 90 bp | TGGTGGTGGGAGGCCACAAGGGTGCATGGGCAAACCTGGGAGTACTaGGAAGGGTGTGAGCTCGGGGTTCATGATGTAAAATTCCCAAAT | + |
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Preference number: 2 (lower is better) Translates to: WWWEATRVHGQTWEY*EGCELGVHDVKFPN Trigger: ATTTGGGAATTTTACATCATGAACCCCGAGCTCACACCCTTCCAAGTACTCCCAGGTTTGCCCATGCACCCTTGTGGCCTCCCACCACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
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| 3UTR CAA 90 bp | GGGCACAGACTGGAGCCATTCGGAGGTGTCTGTCATAAGATTCCTTaGGGCTTTAAAAGGGAGATTTCTGGTTGGTGTCCAAGGTATGCT | + |
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Preference number: 2 (lower is better) Translates to: GHRLEPFGGVCHKIP*GFKREISGWCPRYA Trigger: AGCATACCTTGGACACCAACCAGAAATCTCCCTTTTAAAGCCCAAAGGAATCTTATGACAGACACCTCCGAATGGCTCCAGTCTGTGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
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| 3UTR CAA 90 bp | CTGTTGGTCTCTCCTGGATGGACCCTTGCAGTCAAAATCACAGCCTaGCGCTTTGAGTCACTAGTCTTCAAGGGAGTAGTTATTGTCAAG | + |
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Preference number: 2 (lower is better) Translates to: LLVSPGWTLAVKITA*RFESLVFKGVVIVK Trigger: CTTGACAATAACTACTCCCTTGAAGACTAGTGACTCAAAGCGCAAGGCTGTGATTTTGACTGCAAGGGTCCATCCAGGAGAGACCAACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135304.8 ENSMUST00000148834.8 |
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| 3UTR-3UTR TCA 90 bp | GTCCAATTCGTCCCAGTCCTCTTGCTTTGGAAAGACGAGCATCTTTTTGCTTTGCCTGAGAGGTCACCTTaGGAAGGTAAGTCTGAGTGT | + |
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Preference number: 2 (lower is better) Translates to: VQFVPVLLLWKDEHLFALPERSP*EGKSEC Trigger: ACACTCAGACTTACCTTCTCAAGGTGACCTCTCAGG...CAAAGCAAAAAGATGCTCGTCTTTCCAAAGCAAGAGGACTGGGACGAATTGGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGAAGGTGTGCCTTCACTGGCTCTGGAAGAATCAGGACTTCTAATCGTTTACGGAAATGATGGTGGCTaGTGGCTCATCAAAGTGACT | + |
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Preference number: 2 (lower is better) Translates to: AEGVPSLALEESGLLIVYGNDGG*WLIKVT Trigger: AGTCACTTTGATGAGCCAGCAGCCACCATCATTTCC...GTAAACGATTAGAAGTCCTGATTCTTCCAGAGCCAGTGAAGGCACACCTTCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
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| 3UTR-3UTR CCA 90 bp | TCCAGGAAGCCTTTCATGATCCAAGAGCTGTTGGTCTCTCCTGGATGGACCCTTTGCCAGCCAATGTTATaGGTTTTGGCCTCTTTTTCA | + |
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Preference number: 2 (lower is better) Translates to: SRKPFMIQELLVSPGWTLCQPML*VLASFS Trigger: TGAAAAAGAGGCCAAAACCCATAACATTGGCTGGCA...AAGGGTCCATCCAGGAGAGACCAACAGCTCTTGGATCATGAAAGGCTTCCTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000135304.8 ENSMUST00000148834.8 |
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| 3UTR-3UTR GCA 90 bp | ATTCCTTTGGGCTTTAAAAGGGAGATTTCTGGTTGGTGTCCAAGGTATGCTGTATCGTCCCAGTCCTCTTaGTTTGGAAAGACGAGCATC | + |
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Preference number: 2 (lower is better) Translates to: IPLGFKREISGWCPRYAVSSQSS*FGKTSI Trigger: GATGCTCGTCTTTCCAAAGCAAGAGGACTGGGACGA...TACAGCATACCTTGGACACCAACCAGAAATCTCCCTTTTAAAGCCCAAAGGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGAAGGTGTGCCTTCACTGGCTCTGGAAGAATCAGGACTTCTAATCGTTTACTGGTTCTACCTTTTGTaGTCTATGCAAGTGGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: AEGVPSLALEESGLLIVYWFYLL*SMQVVS Trigger: AGACACCACTTGCATAGACCACAAAAGGTAGAACCA...GTAAACGATTAGAAGTCCTGATTCTTCCAGAGCCAGTGAAGGCACACCTTCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
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| 3UTR-3UTR CCA 90 bp | TCTCCTGGATGGACCCTTGCAGTCAAAATCACAGCCTTGCGCTTTGAGTCACTATTCAGAATAGAACAATaGCTTCATACCCCGATTGTA | + |
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Preference number: 2 (lower is better) Translates to: SPGWTLAVKITALRFESLFRIEQ*LHTPIV Trigger: TACAATCGGGGTATGAAGCCATTGTTCTATTCTGAA...TAGTGACTCAAAGCGCAAGGCTGTGATTTTGACTGCAAGGGTCCATCCAGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135304.8 ENSMUST00000148834.8 |
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| 3UTR-3UTR CCA 90 bp | CCTATGGTCTTTGTTAAGACTCTTAATCATACGCTGGGAGCTGGACCATGTTTTTTGGTCTCTCCTGGATaGACCCTTGCAGTCAAAATC | + |
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Preference number: 2 (lower is better) Translates to: PMVFVKTLNHTLGAGPCFLVSPG*TLAVKI Trigger: GATTTTGACTGCAAGGGTCCATCCAGGAGAGACCAA...AAAACATGGTCCAGCTCCCAGCGTATGATTAAGAGTCTTAACAAAGACCATAGG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
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| 3UTR CAA 90 bp | TCCAATTCGTCCCAGTCCTCTTGCTTTGGAAAGACGAGCATCTTTTaGCTTTGCTTTTCAACTGGTGATGTGACTCTGTTGGTATTCTTG | + |
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Preference number: 2 (lower is better) Translates to: SNSSQSSCFGKTSIF*LCFSTGDVTLLVFL Trigger: CAAGAATACCAACAGAGTCACATCACCAGTTGAAAAGCAAAGCAAAAAGATGCTCGTCTTTCCAAAGCAAGAGGACTGGGACGAATTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
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| 3UTR-3UTR GCA 90 bp | CTTGCAGTCAAAATCACAGCCTTGCGCTTTGAGTCACTAGTCTTCAAGGGAGTATCTGTAGACTATTTCTaGTTGGGTATTAGTGACCTG | + |
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Preference number: 2 (lower is better) Translates to: LAVKITALRFESLVFKGVSVDYF*LGISDL Trigger: CAGGTCACTAATACCCAAGCAGAAATAGTCTACAGA...TACTCCCTTGAAGACTAGTGACTCAAAGCGCAAGGCTGTGATTTTGACTGCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135304.8 ENSMUST00000148834.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCTGGAATGCAGTTGTTACATCATTAGTGTCCTCATTAACATCAAGATTGATCCGTGTTGGGCTCAGTaGACCAGAAGAAGAGACACC | + |
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Preference number: 2 (lower is better) Translates to: LLECSCYIISVLINIKIDPCWAQ*TRRRDT Trigger: GGTGTCTCTTCTTCTGGTCCACTGAGCCCAACACGG...ATCAATCTTGATGTTAATGAGGACACTAATGATGTAACAACTGCATTCCAGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115009.2 ENSMUST00000115012.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCTGGAATGCAGTTGTTACATCATTAGTGTCCTCATTAACATCAAGATTGATGTATGGCCACCGTGTTaGGCTCAGTGGACCAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: LLECSCYIISVLINIKIDVWPPC*AQWTRR Trigger: TCTTCTGGTCCACTGAGCCCAACACGGTGGCCATAC...ATCAATCTTGATGTTAATGAGGACACTAATGATGTAACAACTGCATTCCAGAAG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115009.2 ENSMUST00000115012.8 |
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| 3UTR-3UTR CCA 90 bp | ACCCCGATTGTAAAGACTAGCAGGCTTGGTAAAGTTGACAATAGTGAATCTGTAATTTGTGAAGAGGTCTaGGCGCACAGTCAACTCGTA | + |
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Preference number: 2 (lower is better) Translates to: TPIVKTSRLGKVDNSESVICEEV*AHSQLV Trigger: TACGAGTTGACTGTGCGCCCAGACCTCTTCACAAAT...TACAGATTCACTATTGTCAACTTTACCAAGCCTGCTAGTCTTTACAATCGGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135304.8 ENSMUST00000148834.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGCAGTCAAAATCACAGCCTTGCGCTTTGAGTCACTAGTCTTCAAGGGAGTAGTTGGAGTAAGTGTATaGATAGCAGTGAGCAAAGTA | + |
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Preference number: 2 (lower is better) Translates to: LAVKITALRFESLVFKGVVGVSV*IAVSKV Trigger: TACTTTGCTCACTGCTATCCATACACTTACTCCAAC...TACTCCCTTGAAGACTAGTGACTCAAAGCGCAAGGCTGTGATTTTGACTGCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135304.8 ENSMUST00000148834.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTCTGTCATTGAACTCAATTTCCCTCCTCTTTGTTTAGCCTTTTGGTTAGTGCACAATCACGCCATCTaGATTCAGCATGGGTACCAC | + |
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Preference number: 2 (lower is better) Translates to: FSVIELNFPPLCLAFWLVHNHAI*IQHGYH Trigger: GTGGTACCCATGCTGAATCCAGATGGCGTGATTGTG...CACTAACCAAAAGGCTAAACAAAGAGGAGGGAAATTGAGTTCAATGACAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
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| 3UTR CAA 90 bp | AATTCGTTTCTCATCATCTGTCCAATTCGTCCCAGTCCTCTTGCTTaGGAAAGACGAGCATCTTTTTGCTTTGCTTTTCAACTGGTGATG | + |
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Preference number: 2 (lower is better) Translates to: NSFLIICPIRPSPLA*ERRASFCFAFQLVM Trigger: CATCACCAGTTGAAAAGCAAAGCAAAAAGATGCTCGTCTTTCCAAAGCAAGAGGACTGGGACGAATTGGACAGATGATGAGAAACGAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
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| 3UTR-3UTR TCA 90 bp | GTGTCTGTCATAAGATTCCTTTGGGCTTTAAAAGGGAGATTTCTGGTTGGTGTCAATTTTTGCTCAGCATaGGTGGAAAGATCCGTTGCT | + |
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Preference number: 2 (lower is better) Translates to: VSVIRFLWALKGRFLVGVNFCSA*VERSVA Trigger: AGCAACGGATCTTTCCACTCATGCTGAGCAAAAATT...GACACCAACCAGAAATCTCCCTTTTAAAGCCCAAAGGAATCTTATGACAGACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
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| 3UTR-3UTR CCA 90 bp | GTGTCTGTCATAAGATTCCTTTGGGCTTTAAAAGGGAGATTTCTGGTTGGTGTCCATACACCATATTCCTaGCAAGTGTGTGACACAAGA | + |
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Preference number: 2 (lower is better) Translates to: VSVIRFLWALKGRFLVGVHTPYS*QVCDTR Trigger: TCTTGTGTCACACACTTGCCAGGAATATGGTGTATG...GACACCAACCAGAAATCTCCCTTTTAAAGCCCAAAGGAATCTTATGACAGACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
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| 3UTR-3UTR CCA 90 bp | TCTTCTTCTGAAGATTGCAGAGAGGTAACAAACTTTCAAATGACCCAAGGGGCACTCTTAATCATACGCTaGGAGCTGGACCATGTTTTT | + |
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Preference number: 2 (lower is better) Translates to: SSSEDCREVTNFQMTQGALLIIR*ELDHVF Trigger: AAAAACATGGTCCAGCTCCCAGCGTATGATTAAGAG...TGCCCCTTGGGTCATTTGAAAGTTTGTTACCTCTCTGCAATCTTCAGAAGAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
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| 3UTR-3UTR TCA 90 bp | ATTCCTTTGGGCTTTAAAAGGGAGATTTCTGGTTGGTGTCCAAGGTATGCTGTATTTCAACTGGTGATGTaGCTCTGTTGGTATTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: IPLGFKREISGWCPRYAVFQLVM*LCWYSC Trigger: ACAAGAATACCAACAGAGTCACATCACCAGTTGAAA...TACAGCATACCTTGGACACCAACCAGAAATCTCCCTTTTAAAGCCCAAAGGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
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| 3UTR-3UTR CCA 90 bp | GGTAAAGTTGACAATAGTGAATCTGTAGACTATTTCTGCTTGGGTATTAGTGACATTTGTGAAGAGGTCTaGGCGCACAGTCAACTCGTA | + |
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Preference number: 2 (lower is better) Translates to: GKVDNSESVDYFCLGISDICEEV*AHSQLV Trigger: TACGAGTTGACTGTGCGCCCAGACCTCTTCACAAAT...GTCACTAATACCCAAGCAGAAATAGTCTACAGATTCACTATTGTCAACTTTACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135304.8 ENSMUST00000148834.8 |
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| 3UTR-3UTR TCA 90 bp | ATTCTTTCAAGCACTGATAATATTTGCTCCTGTCAGGATCACAGTAGTCCAACACCCTCTTTGCTTTTCTaGACGTTAAACTTGCAAGCT | + |
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Preference number: 2 (lower is better) Translates to: ILSSTDNICSCQDHSSPTPSLLF*TLNLQA Trigger: AGCTTGCAAGTTTAACGTTCAGAAAAGCAAAGAGGG...TGTTGGACTACTGTGATCCTGACAGGAGCAAATATTATCAGTGCTTGAAAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
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| 3UTR-3UTR GCA 90 bp | CAGTCTTCTGAGGAGCCAGATTGTTACTTTGCTTATACTCACATAGTCAACTCTTCTGTAGACTATTTCTaGTTGGGTATTAGTGACCTG | + |
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Preference number: 2 (lower is better) Translates to: QSSEEPDCYFAYTHIVNSSVDYF*LGISDL Trigger: CAGGTCACTAATACCCAAGCAGAAATAGTCTACAGA...AGAGTTGACTATGTGAGTATAAGCAAAGTAACAATCTGGCTCCTCAGAAGACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
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| 3UTR CAA 90 bp | AGGCTTGGTAAAGTTGACAATAGTGAATCTGTAGACTATTTCTGCTaGGGTATTAGTGACCTGGAAATAGTACCACTGAGTGTGCTTATT | + |
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Preference number: 2 (lower is better) Translates to: RLGKVDNSESVDYFC*GISDLEIVPLSVLI Trigger: AATAAGCACACTCAGTGGTACTATTTCCAGGTCACTAATACCCAAGCAGAAATAGTCTACAGATTCACTATTGTCAACTTTACCAAGCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135304.8 ENSMUST00000148834.8 |
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| 3UTR-3UTR GCA 90 bp | CCTATGGTCTTTGTTAAGACTCTTAATCATACGCTGGGAGCTGGACCATGTTTTAGTGGAAAGATCCGTTaGTGTAAGTATAATCCTTTT | + |
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Preference number: 2 (lower is better) Translates to: PMVFVKTLNHTLGAGPCFSGKIR*CKYNPF Trigger: AAAAGGATTATACTTACAGCAACGGATCTTTCCACT...AAAACATGGTCCAGCTCCCAGCGTATGATTAAGAGTCTTAACAAAGACCATAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
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| 3UTR-3UTR CCA 90 bp | CCAACAGAGAATCACAAAAATGATATCCCATCGACTCTAAATCTTTTGTGCCGAGTTGGAGTAAGTGTATaGATAGCAGTGAGCAAAGTA | + |
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Preference number: 2 (lower is better) Translates to: PTENHKNDIPSTLNLLCRVGVSV*IAVSKV Trigger: TACTTTGCTCACTGCTATCCATACACTTACTCCAAC...TCGGCACAAAAGATTTAGAGTCGATGGGATATCATTTTTGTGATTCTCTGTTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
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| 3UTR CAA 90 bp | AGGGAAGTTAAAGTCTTAAAGGTACGTACTATATTTGGGCAATTTTaGCTCAGCATGAGTGGAAAGATCCGTTGCTGTAAGTATAATCCT | + |
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Preference number: 2 (lower is better) Translates to: REVKVLKVRTIFGQF*LSMSGKIRCCKYNP Trigger: AGGATTATACTTACAGCAACGGATCTTTCCACTCATGCTGAGCAAAAATTGCCCAAATATAGTACGTACCTTTAAGACTTTAACTTCCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135304.8 |
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| 3UTR-3UTR GCA 90 bp | CAGTCTTCTGAGGAGCCAGATTGTTACTTTGCTTATACTCACATAGTCAACTCTGTGTCTTTTAATATGTaGTATTTTATCACCCAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: QSSEEPDCYFAYTHIVNSVSFNM*YFITQR Trigger: CCTCTGGGTGATAAAATAGCACATATTAAAAGACAC...AGAGTTGACTATGTGAGTATAAGCAAAGTAACAATCTGGCTCCTCAGAAGACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
||
| 3UTR CAA 90 bp | TGGATTGGATTCTTACAAGTTTCTAAAATACATGTCCTATGGTCTTaGTTAAGACTCTTAATCATACGCTGGGAGCTGGACCATGTTTTT | + |
|
Preference number: 2 (lower is better) Translates to: WIGFLQVSKIHVLWS*LRLLIIRWELDHVF Trigger: AAAAACATGGTCCAGCTCCCAGCGTATGATTAAGAGTCTTAACAAAGACCATAGGACATGTATTTTAGAAACTTGTAAGAATCCAATCCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
||
| 3UTR CAA 90 bp | GACTCTGTTGGTATTCTTGTCTTCTCAATCCAATGTGAAGGTCTTTaGTTCATAGGACATTTCGCCATTTTGAAACAACTTTCATGTATA | + |
|
Preference number: 2 (lower is better) Translates to: DSVGILVFSIQCEGL*FIGHFAILKQLSCI Trigger: TATACATGAAAGTTGTTTCAAAATGGCGAAATGTCCTATGAACAAAAGACCTTCACATTGGATTGAGAAGACAAGAATACCAACAGAGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCAAGGGCACAGCCTCCCATTGGCTGGTGGCAAGCTGCACATCCTTAGCCTTTATGATCCAAGAGCTGTaGGTCTCTCCTGGATGGACC | + |
|
Preference number: 3 (lower is better) Translates to: LKGTASHWLVASCTSLAFMIQEL*VSPGWT Trigger: GGTCCATCCAGGAGAGACCAACAGCTCTTGGATCAT...AAAGGCTAAGGATGTGCAGCTTGCCACCAGCCAATGGGAGGCTGTGCCCTTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
||
| 3UTR GCA 72 bp | CTCAAGGGCACAGCCTCCCATTGGCTGGTGGCAAGCTaGACATCCTTAGCCTTTTTGCCCCAGAGTTCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LKGTASHWLVAS*TSLAFLPQSSK Trigger: TTTTGAACTCTGGGGCAAAAAGGCTAAGGATGTGCAGCTTGCCACCAGCCAATGGGAGGCTGTGCCCTTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
||
| 3UTR TCA 72 bp | CCAGTTAACTGTTCCTGTGAATCTTCAGCTGGAAGGTaGGCAGGCCATCACTCTCACTGGGTTTCTTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: PVNCSCESSAGR*AGHHSHWVSCW Trigger: CCAGCAAGAAACCCAGTGAGAGTGATGGCCTGCTCACCTTCCAGCTGAAGATTCACAGGAACAGTTAACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
||
| 3UTR GCA 72 bp | TGCAGATGGGATTGTAGCTTGCACCCTGGGACTGAGTaGTCACCACCTAAGACAAATGTGCAGGGTTTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: CRWDCSLHPGTE*SPPKTNVQGLF Trigger: GAACAAACCCTGCACATTTGTCTTAGGTGGTGAGCACTCAGTCCCAGGGTGCAAGCTACAATCCCATCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCAAGGGCACAGCCTCCCATTGGCTGGTGGCAAGCTGCACATCCTTAGCCTTTATATTTGGGCAATTTTaGCTCAGCATGAGTGGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: LKGTASHWLVASCTSLAFIFGQF*LSMSGK Trigger: CTTTCCACTCATGCTGAGCAAAAATTGCCCAAATAT...AAAGGCTAAGGATGTGCAGCTTGCCACCAGCCAATGGGAGGCTGTGCCCTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCAAGGGCACAGCCTCCCATTGGCTGGTGGCAAGCTGCACATCCTTAGCCTTTTGTTATTCTGGCAGTTaGCTAGGATGGCATTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LKGTASHWLVASCTSLAFCYSGS*LGWHFF Trigger: AAAGAAATGCCATCCTAGCAAACTGCCAGAATAACA...AAAGGCTAAGGATGTGCAGCTTGCCACCAGCCAATGGGAGGCTGTGCCCTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
||
| 3UTR CCA 72 bp | ATGCTGGACTTTTTCATCAATGACCTCACAGTGGTATaGCCACCGTGTTGGGCTCAGTGGACCAGAAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: MLDFFINDLTVV*PPCWAQWTRRR Trigger: TCTTCTTCTGGTCCACTGAGCCCAACACGGTGGCCATACCACTGTGAGGTCATTGATGAAAAAGTCCAGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115009.2 ENSMUST00000115012.8 |
||
| 3UTR CCA 72 bp | CCTTTCATGATCCAAGAGCTGTTGGTCTCTCCTGGATaGACCCTTGCAGTCAAAATCACAGCCTTGCGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: PFMIQELLVSPG*TLAVKITALRF Trigger: AAAGCGCAAGGCTGTGATTTTGACTGCAAGGGTCCATCCAGGAGAGACCAACAGCTCTTGGATCATGAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135304.8 ENSMUST00000148834.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCAGGAAGCCTTTCATGATCCAAGAGCTGTTGGTCTCTCCTGGATGGACCCTTGCCAGACAGGTATTCTaGAAGGTTGGAGTAAGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: SRKPFMIQELLVSPGWTLARQVF*KVGVSV Trigger: TACACTTACTCCAACCTTCAAGAATACCTGTCTGGC...AAGGGTCCATCCAGGAGAGACCAACAGCTCTTGGATCATGAAAGGCTTCCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135304.8 ENSMUST00000148834.8 |
||
| 3UTR TCA 72 bp | CACCTTGAGAAGGTAAGTCTGAGTGTCATTGGACTCTaGGCTGTCAGAGCCTCGACTACTAGACTCTACATC | + |
|
Preference number: 3 (lower is better) Translates to: HLEKVSLSVIGL*AVRASTTRLYI Trigger: GATGTAGAGTCTAGTAGTCGAGGCTCTGACAGCTCAGAGTCCAATGACACTCAGACTTACCTTCTCAAGGTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
||
| 3UTR GCA 72 bp | TTTAGGCTGCAGAACACTGTTACCCCTGATGATACTTaGATCCATGTTAGAACTCAAGGGCACAGCCTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: FRLQNTVTPDDT*IHVRTQGHSLP Trigger: TGGGAGGCTGTGCCCTTGAGTTCTAACATGGATGCAAGTATCATCAGGGGTAACAGTGTTCTGCAGCCTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTCCTGGATGGACCCTTGCAGTCAAAATCACAGCCTTGCGCTTTGAGTCACTAGCCAGACAGGTATTCTaGAAGGTTGGAGTAAGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: SPGWTLAVKITALRFESLARQVF*KVGVSV Trigger: TACACTTACTCCAACCTTCAAGAATACCTGTCTGGC...TAGTGACTCAAAGCGCAAGGCTGTGATTTTGACTGCAAGGGTCCATCCAGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135304.8 ENSMUST00000148834.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAGGTGTGCCTTCACTGGCTCTGGAAGAATCAGGACTTCTAATCGTTTACAACTTCGTCCCAGTCCTCTaGCTTTGGAAAGACGAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: EGVPSLALEESGLLIVYNFVPVL*LWKDEH Trigger: ATGCTCGTCTTTCCAAAGCAAGAGGACTGGGACGAA...GTTGTAAACGATTAGAAGTCCTGATTCTTCCAGAGCCAGTGAAGGCACACCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTATGGTCTTTGTTAAGACTCTTAATCATACGCTGGGAGCTGGACCATGTTTTCTCCTGGATGGACCCTaGCAGTCAAAATCACAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: PMVFVKTLNHTLGAGPCFLLDGP*QSKSQP Trigger: AGGCTGTGATTTTGACTGCAAGGGTCCATCCAGGAG...AAAACATGGTCCAGCTCCCAGCGTATGATTAAGAGTCTTAACAAAGACCATAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
||
| 3UTR CCA 72 bp | GCCAGACAGGTATTCTTGAAGGTTGGAGTAAGTGTATaGATAGCAGTGAGCAAAGTAGCACGTATCCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: ARQVFLKVGVSV*IAVSKVARILA Trigger: AGCCAGGATACGTGCTACTTTGCTCACTGCTATCCATACACTTACTCCAACCTTCAAGAATACCTGTCTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135304.8 ENSMUST00000148834.8 |
||
| 3UTR TCA 72 bp | TTGAGTCTCCTAAAATATAATCCAGGAAGCCTTTCATaGTCCAAGAGCTGTTGGTCTCTCCTGGATGGACCC | + |
|
Preference number: 3 (lower is better) Translates to: LSLLKYNPGSLS*SKSCWSLLDGP Trigger: GGGTCCATCCAGGAGAGACCAACAGCTCTTGGATCATGAAAGGCTTCCTGGATTATATTTTAGGAGACTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135304.8 ENSMUST00000148834.8 |
||
| 3UTR TCA 72 bp | CTGCTTTTGAACTCACATTATAGTCCAGGCAAGCATTaGGCTTGTGATCTTCCTGAGTCAGGCTCCTATGCA | + |
|
Preference number: 3 (lower is better) Translates to: LLLNSHYSPGKH*ACDLPESGSYA Trigger: TGCATAGGAGCCTGACTCAGGAAGATCACAAGCTCAATGCTTGCCTGGACTATAATGTGAGTTCAAAAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
||
| 3UTR GCA 72 bp | ACACTCACTCATTCCTTGAGCTTCTGTAGTCTTATTTaGATGATACTGAAGTGGGACCTAGGGCTTCCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: TLTHSLSFCSLI*MILKWDLGLPQ Trigger: TTGGGGAAGCCCTAGGTCCCACTTCAGTATCATGCAAATAAGACTACAGAAGCTCAAGGAATGAGTGAGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
||
| 3UTR TCA 72 bp | ATGGACCCTTGCAGTCAAAATCACAGCCTTGCGCTTTaGGTCACTAGTCTTCAAGGGAGTAGTTATTGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: MDPCSQNHSLAL*VTSLQGSSYCQ Trigger: TTGACAATAACTACTCCCTTGAAGACTAGTGACTCAAAGCGCAAGGCTGTGATTTTGACTGCAAGGGTCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135304.8 ENSMUST00000148834.8 |
||
| 3UTR TCA 72 bp | GATACTTTTTCTTGTTTCTTGCCTGAGAGGTCACCTTaGGAAGGTAAGTCTGAGTGTCATTGGACTCTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: DTFSCFLPERSP*EGKSECHWTLS Trigger: GCTCAGAGTCCAATGACACTCAGACTTACCTTCTCAAGGTGACCTCTCAGGCAAGAAACAAGAAAAAGTATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTCTTTCAAGCACTGATAATATTTGCTCCTGTCAGGATCACAGTAGTCCAACAAGCATGGGTACCACCTaGAAGATGAAAGTGTCCCGA | + |
|
Preference number: 3 (lower is better) Translates to: ILSSTDNICSCQDHSSPTSMGTT*KMKVSR Trigger: TCGGGACACTTTCATCTTCAAGGTGGTACCCATGCT...TGTTGGACTACTGTGATCCTGACAGGAGCAAATATTATCAGTGCTTGAAAGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
||
| 3UTR GCA 72 bp | GTTTCTCATCATCTGTCCAATTCGTCCCAGTCCTCTTaGTTTGGAAAGACGAGCATCTTTTTGCTTTGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: VSHHLSNSSQSS*FGKTSIFLLCF Trigger: AAAGCAAAGCAAAAAGATGCTCGTCTTTCCAAAGCAAGAGGACTGGGACGAATTGGACAGATGATGAGAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
||
| 3UTR CCA 72 bp | CAACGGTCTTCTGAAACAGTGAGCCACATAAACATCTaGTGCATCTATCCTTGGATCATTCCCATCAGAATT | + |
|
Preference number: 3 (lower is better) Translates to: QRSSETVSHINI*CIYPWIIPIRI Trigger: AATTCTGATGGGAATGATCCAAGGATAGATGCACCAGATGTTTATGTGGCTCACTGTTTCAGAAGACCGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGTCTTCTGAGGAGCCAGATTGTTACTTTGCTTATACTCACATAGTCAACTCTCTGGTGCATCTATCCTaGGATCATTCCCATCAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: QSSEEPDCYFAYTHIVNSLVHLS*DHSHQN Trigger: ATTCTGATGGGAATGATCCAAGGATAGATGCACCAG...AGAGTTGACTATGTGAGTATAAGCAAAGTAACAATCTGGCTCCTCAGAAGACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAGGTGTGCCTTCACTGGCTCTGGAAGAATCAGGACTTCTAATCGTTTACAACACTGAACTTCCTGGATaGGATTCTTACAAGTTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: EGVPSLALEESGLLIVYNTELPG*DSYKFL Trigger: TAGAAACTTGTAAGAATCCAATCCAGGAAGTTCAGT...GTTGTAAACGATTAGAAGTCCTGATTCTTCCAGAGCCAGTGAAGGCACACCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGTCTTCTGAGGAGCCAGATTGTTACTTTGCTTATACTCACATAGTCAACTCTAGCAGTTGGAATAAGTaGATGCTGTTGCAAGTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: QSSEEPDCYFAYTHIVNSSSWNK*MLLQVG Trigger: GCCAACTTGCAACAGCATCAACTTATTCCAACTGCT...AGAGTTGACTATGTGAGTATAAGCAAAGTAACAATCTGGCTCCTCAGAAGACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAGGTGTGCCTTCACTGGCTCTGGAAGAATCAGGACTTCTAATCGTTTACAACATATTTCCATGTCATTaGGTTCTACCTTTTGTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: EGVPSLALEESGLLIVYNIFPCH*VLPFVV Trigger: GACCACAAAAGGTAGAACCAAATGACATGGAAATAT...GTTGTAAACGATTAGAAGTCCTGATTCTTCCAGAGCCAGTGAAGGCACACCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGTCTGTCATAAGATTCCTTTGGGCTTTAAAAGGGAGATTTCTGGTTGGTGTCGCAAGCGTGCATCACTaGAGTCTCCTAAAATATAAT | + |
|
Preference number: 3 (lower is better) Translates to: VSVIRFLWALKGRFLVGVASVHH*SLLKYN Trigger: ATTATATTTTAGGAGACTCAAGTGATGCACGCTTGC...GACACCAACCAGAAATCTCCCTTTTAAAGCCCAAAGGAATCTTATGACAGACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTTCTTCTGAAGATTGCAGAGAGGTAACAAACTTTCAAATGACCCAAGGGGCATTTGCCATAAACCTCTaGCATGTTATTCTGGCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: SSSEDCREVTNFQMTQGAFAINL*HVILAV Trigger: AACTGCCAGAATAACATGCAAGAGGTTTATGGCAAA...TGCCCCTTGGGTCATTTGAAAGTTTGTTACCTCTCTGCAATCTTCAGAAGAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTTCTTCTGAAGATTGCAGAGAGGTAACAAACTTTCAAATGACCCAAGGGGCAAAGACGAGCATCTTTTaGCTTTGCTTTTCAACTGGT | + |
|
Preference number: 3 (lower is better) Translates to: SSSEDCREVTNFQMTQGAKTSIF*LCFSTG Trigger: ACCAGTTGAAAAGCAAAGCAAAAAGATGCTCGTCTT...TGCCCCTTGGGTCATTTGAAAGTTTGTTACCTCTCTGCAATCTTCAGAAGAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
||
| 3UTR CCA 72 bp | AGGTATGCTGTATCTTCTTCTATTTATGCAAGCAGTTaGAATAAGTTGATGCTGTTGCAAGTTGGCTATCGG | + |
|
Preference number: 3 (lower is better) Translates to: RYAVSSSIYASS*NKLMLLQVGYR Trigger: CCGATAGCCAACTTGCAACAGCATCAACTTATTCCAACTGCTTGCATAAATAGAAGAAGATACAGCATACCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
||
| 3UTR TCA 72 bp | GTATTTTACAAAACTTTGATCTTACTGGGTCACTGTTaGTGCCAGACAGGTATTCTTGAAGGTTGGAGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: VFYKTLILLGHC*CQTGILEGWSK Trigger: CTTACTCCAACCTTCAAGAATACCTGTCTGGCATCAACAGTGACCCAGTAAGATCAAAGTTTTGTAAAATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135304.8 ENSMUST00000148834.8 |
||
| 3UTR TCA 72 bp | AGGTACGTACTATATTTGGGCAATTTTTGCTCAGCATaGGTGGAAAGATCCGTTGCTGTAAGTATAATCCTT | + |
|
Preference number: 3 (lower is better) Translates to: RYVLYLGNFCSA*VERSVAVSIIL Trigger: AAGGATTATACTTACAGCAACGGATCTTTCCACTCATGCTGAGCAAAAATTGCCCAAATATAGTACGTACCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135304.8 |
||
| 3UTR GCA 72 bp | GGTAAAGTTGACAATAGTGAATCTGTAGACTATTTCTaGTTGGGTATTAGTGACCTGGAAATAGTACCACTG | + |
|
Preference number: 3 (lower is better) Translates to: GKVDNSESVDYF*LGISDLEIVPL Trigger: CAGTGGTACTATTTCCAGGTCACTAATACCCAAGCAGAAATAGTCTACAGATTCACTATTGTCAACTTTACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135304.8 ENSMUST00000148834.8 |
||
| 3UTR TCA 72 bp | ATAATTAAGAGAATATCTCTGCACTCCTCAGTCTTCTaGGGAGCCAGATTGTTACTTTGCTTATACTCACAT | + |
|
Preference number: 3 (lower is better) Translates to: IIKRISLHSSVF*GARLLLCLYSH Trigger: ATGTGAGTATAAGCAAAGTAACAATCTGGCTCCTCAGAAGACTGAGGAGTGCAGAGATATTCTCTTAATTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
||
| 3UTR CCA 72 bp | AAGATTCCTTTGGGCTTTAAAAGGGAGATTTCTGGTTaGTGTCCAAGGTATGCTGTATCTTCTTCTATTTAT | + |
|
Preference number: 3 (lower is better) Translates to: KIPLGFKREISG*CPRYAVSSSIY Trigger: ATAAATAGAAGAAGATACAGCATACCTTGGACACCAACCAGAAATCTCCCTTTTAAAGCCCAAAGGAATCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
||
| 3UTR TCA 72 bp | ATTGTCAAGACATACACCATATTCCTGGCAAGTGTGTaGCACAAGACACGTATTTTACAAAACTTTGATCTT | + |
|
Preference number: 3 (lower is better) Translates to: IVKTYTIFLASV*HKTRILQNFDL Trigger: AAGATCAAAGTTTTGTAAAATACGTGTCTTGTGTCACACACTTGCCAGGAATATGGTGTATGTCTTGACAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135304.8 ENSMUST00000148834.8 |
||
| 3UTR GCA 72 bp | AATTTGATTCATCGTGTCTTTGGAGTAAATGTTCTTTaGCATAAACCTCTTGCATGTTATTCTGGCAGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: NLIHRVFGVNVL*HKPLACYSGSL Trigger: CAAACTGCCAGAATAACATGCAAGAGGTTTATGGCAAAGAACATTTACTCCAAAGACACGATGAATCAAATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
||
| 3UTR CAA 72 bp | GAGGCCACAAGGGTGCATGGGCAAACCTGGGAGTACTaGGAAGGGTGTGAGCTCGGGGTTCATGATGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: EATRVHGQTWEY*EGCELGVHDVK Trigger: TTTTACATCATGAACCCCGAGCTCACACCCTTCCAAGTACTCCCAGGTTTGCCCATGCACCCTTGTGGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
||
| 3UTR CAA 72 bp | TGCATCCATGTTAGAACTCAAGGGCACAGCCTCCCATaGGCTGGTGGCAAGCTGCACATCCTTAGCCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CIHVRTQGHSLP*AGGKLHILSLF Trigger: AAAAAGGCTAAGGATGTGCAGCTTGCCACCAGCCAATGGGAGGCTGTGCCCTTGAGTTCTAACATGGATGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
||
| CDS-3UTR GCA 90 bp | GCCTTTCATGATCCAAGAGCTGTTGGTCTCTCCTGGATGGACCCTTGCAGTCAACAGCTGCCAGTAGTGTaGACGGATGAATATCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: AFHDPRAVGLSWMDPCSQQLPVV*TDEYHH Trigger: GTGATGATATTCATCCGTGCACACTACTGGCAGCTG...TTGACTGCAAGGGTCCATCCAGGAGAGACCAACAGCTCTTGGATCATGAAAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135304.8 ENSMUST00000148834.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCTGGATGGACCCTTGCAGTCAAAATCACAGCCTTGCGCTTTGAGTCACTACAGCTGCCAGTAGTGTaGACGGATGAATATCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: SPGWTLAVKITALRFESLQLPVV*TDEYHH Trigger: GTGATGATATTCATCCGTGCACACTACTGGCAGCTG...TAGTGACTCAAAGCGCAAGGCTGTGATTTTGACTGCAAGGGTCCATCCAGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135304.8 ENSMUST00000148834.8 |
||
| 3UTR CAA 72 bp | TCTCCTGGATGGACCCTTGCAGTCAAAATCACAGCCTaGCGCTTTGAGTCACTAGTCTTCAAGGGAGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SPGWTLAVKITA*RFESLVFKGVV Trigger: AACTACTCCCTTGAAGACTAGTGACTCAAAGCGCAAGGCTGTGATTTTGACTGCAAGGGTCCATCCAGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135304.8 ENSMUST00000148834.8 |
||
| CDS-3UTR TCA 90 bp | TCATCAATGACCTCACAGTGGTATGGCCACCGTGTTGGGCTCAGTGGACCAGAAGAATCAGAAATTTCATaGAGGAATCCTCATCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSMTSQWYGHRVGLSGPEESEIS*RNPHPS Trigger: ACTTGGATGAGGATTCCTTCATGAAATTTCTGATTC...TTCTGGTCCACTGAGCCCAACACGGTGGCCATACCACTGTGAGGTCATTGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115009.2 ENSMUST00000115012.8 |
||
| CDS-3UTR TCA 90 bp | TTCATCAATGACCTCACAGTGGTATGGCCACCGTGTTGGGCTCAGTGGACCAGAGAATCAGAAATTTCATaGAGGAATCCTCATCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FINDLTVVWPPCWAQWTRESEIS*RNPHPS Trigger: ACTTGGATGAGGATTCCTTCATGAAATTTCTGATTC...TCTGGTCCACTGAGCCCAACACGGTGGCCATACCACTGTGAGGTCATTGATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115009.2 ENSMUST00000115012.8 |
||
| CDS-3UTR CCA 90 bp | CTCTTTTTCAGAATAGAACAATGGCTTCATACCCCGATTGTAAAGACTAGCAGGCCGTGTTGGGCTCAGTaGACCAGAAGAAGAGACACC | + |
|
Preference number: 4 (lower is better) Translates to: LFFRIEQWLHTPIVKTSRPCWAQ*TRRRDT Trigger: GGTGTCTCTTCTTCTGGTCCACTGAGCCCAACACGG...CCTGCTAGTCTTTACAATCGGGGTATGAAGCCATTGTTCTATTCTGAAAAAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000135304.8 ENSMUST00000148834.8 |
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| CDS-3UTR CCA 90 bp | CTCTTTTTCAGAATAGAACAATGGCTTCATACCCCGATTGTAAAGACTAGCAGGGTATGGCCACCGTGTTaGGCTCAGTGGACCAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: LFFRIEQWLHTPIVKTSRVWPPC*AQWTRR Trigger: TCTTCTGGTCCACTGAGCCCAACACGGTGGCCATAC...CCTGCTAGTCTTTACAATCGGGGTATGAAGCCATTGTTCTATTCTGAAAAAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000135304.8 ENSMUST00000148834.8 |
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| CDS-3UTR CCA 90 bp | CGTTGCTGTAAGTATAATCCTTTTGTTTTAGATCTGCTGCTACCATCACAACCAGACCTCACAGTGGTATaGCCACCGTGTTGGGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: RCCKYNPFVLDLLLPSQPDLTVV*PPCWAQ Trigger: CTGAGCCCAACACGGTGGCCATACCACTGTGAGGTC...TGGTTGTGATGGTAGCAGCAGATCTAAAACAAAAGGATTATACTTACAGCAACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135304.8 ENSMUST00000148834.8 |
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| CDS-3UTR CCA 90 bp | TTGGGCTTTAAAAGGGAGATTTCTGGTTGGTGTCCAAGGTATGCTGTATCTTCTTCAATGACCTCACAGTaGTATGGCCACCGTGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: LGFKREISGWCPRYAVSSSMTSQ*YGHRVG Trigger: CCCAACACGGTGGCCATACCACTGTGAGGTCATTGA...AGAAGATACAGCATACCTTGGACACCAACCAGAAATCTCCCTTTTAAAGCCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
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| 3UTR CAA 72 bp | CTGGAGCCATTCGGAGGTGTCTGTCATAAGATTCCTTaGGGCTTTAAAAGGGAGATTTCTGGTTGGTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: LEPFGGVCHKIP*GFKREISGWCP Trigger: TGGACACCAACCAGAAATCTCCCTTTTAAAGCCCAAAGGAATCTTATGACAGACACCTCCGAATGGCTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
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| 3UTR CAA 72 bp | GAGCTGAGAAGCTGGGCGCCTACACTCACTCATTCCTaGAGCTTCTGTAGTCTTATTTGCATGATACTGAAG | + |
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Preference number: 4 (lower is better) Translates to: ELRSWAPTLTHS*SFCSLICMILK Trigger: CTTCAGTATCATGCAAATAAGACTACAGAAGCTCAAGGAATGAGTGAGTGTAGGCGCCCAGCTTCTCAGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
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| CDS-3UTR TCA 90 bp | ATCCAAGAGCTGTTGGTCTCTCCTGGATGGACCCTTGCAGTCAAAATCACAGCCCACTTACAAATTTCATaGAGGAATCCTCATCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: IQELLVSPGWTLAVKITAHLQIS*RNPHPS Trigger: ACTTGGATGAGGATTCCTTCATGAAATTTGTAAGTG...GGCTGTGATTTTGACTGCAAGGGTCCATCCAGGAGAGACCAACAGCTCTTGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135304.8 ENSMUST00000148834.8 |
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| CDS-3UTR GCA 90 bp | GCCTTTCATGATCCAAGAGCTGTTGGTCTCTCCTGGATGGACCCTTGCAGTCAAGGAGTCCATTCAATATaGTGGACTTTTTCATCAATG | + |
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Preference number: 4 (lower is better) Translates to: AFHDPRAVGLSWMDPCSQGVHSI*WTFSSM Trigger: CATTGATGAAAAAGTCCAGCATATTGAATGGACTCC...TTGACTGCAAGGGTCCATCCAGGAGAGACCAACAGCTCTTGGATCATGAAAGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000135304.8 ENSMUST00000148834.8 |
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| CDS-3UTR CCA 90 bp | TCTCGTTTCTCCATTAACCTATTGATCATGTTCCTTGTATACCAAACAGAAGGGCCGTGTTGGGCTCAGTaGACCAGAAGAAGAGACACC | + |
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Preference number: 4 (lower is better) Translates to: SRFSINLLIMFLVYQTEGPCWAQ*TRRRDT Trigger: GGTGTCTCTTCTTCTGGTCCACTGAGCCCAACACGG...CCCTTCTGTTTGGTATACAAGGAACATGATCAATAGGTTAATGGAGAAACGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135304.8 ENSMUST00000148834.8 |
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| CDS-3UTR CCA 90 bp | CGTTGCTGTAAGTATAATCCTTTTGTTTTAGATCTGCTGCTACCATCACAACCAGTATGGCCACCGTGTTaGGCTCAGTGGACCAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: RCCKYNPFVLDLLLPSQPVWPPC*AQWTRR Trigger: TCTTCTGGTCCACTGAGCCCAACACGGTGGCCATAC...TGGTTGTGATGGTAGCAGCAGATCTAAAACAAAAGGATTATACTTACAGCAACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135304.8 ENSMUST00000148834.8 |
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| 3UTR CAA 72 bp | CGTTTCTCATCATCTGTCCAATTCGTCCCAGTCCTCTaGCTTTGGAAAGACGAGCATCTTTTTGCTTTGCTT | + |
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Preference number: 4 (lower is better) Translates to: RFSSSVQFVPVL*LWKDEHLFALL Trigger: AAGCAAAGCAAAAAGATGCTCGTCTTTCCAAAGCAAGAGGACTGGGACGAATTGGACAGATGATGAGAAACG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
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| CDS-3UTR CCA 90 bp | ATACACCATATTCCTGGCAAGTGTGTGACACAAGACACGTATTTTACAAAACTTTCAATGACCTCACAGTaGTATGGCCACCGTGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: IHHIPGKCVTQDTYFTKLSMTSQ*YGHRVG Trigger: CCCAACACGGTGGCCATACCACTGTGAGGTCATTGA...AAGTTTTGTAAAATACGTGTCTTGTGTCACACACTTGCCAGGAATATGGTGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135304.8 ENSMUST00000148834.8 |
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| CDS-3UTR CCA 90 bp | GCTGAAGGTGTGCCTTCACTGGCTCTGGAAGAATCAGGACTTCTAATCGTTTACGTCCATTCAATATGCTaGACTTTTTCATCAATGACC | + |
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Preference number: 4 (lower is better) Translates to: AEGVPSLALEESGLLIVYVHSIC*TFSSMT Trigger: GGTCATTGATGAAAAAGTCCAGCATATTGAATGGAC...GTAAACGATTAGAAGTCCTGATTCTTCCAGAGCCAGTGAAGGCACACCTTCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
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| 3UTR CAA 72 bp | AACAGTGAGCCACATAAACATCTGGTGCATCTATCCTaGGATCATTCCCATCAGAATTTGATTCATCGTGTC | + |
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Preference number: 4 (lower is better) Translates to: NSEPHKHLVHLS*DHSHQNLIHRV Trigger: GACACGATGAATCAAATTCTGATGGGAATGATCCAAGGATAGATGCACCAGATGTTTATGTGGCTCACTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
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| 3UTR CAA 72 bp | AATCACAAAAATGATATCCCATCGACTCTAAATCTTTaGTGCCGAAATGAGTGCCTCGTTTATTGCCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: NHKNDIPSTLNL*CRNECLVYCPE Trigger: CTCTGGGCAATAAACGAGGCACTCATTTCGGCACAAAAGATTTAGAGTCGATGGGATATCATTTTTGTGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
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| 3UTR CAA 72 bp | CTGGTGCATCTATCCTTGGATCATTCCCATCAGAATTaGATTCATCGTGTCTTTGGAGTAAATGTTCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: LVHLSLDHSHQN*IHRVFGVNVLC Trigger: GCAAAGAACATTTACTCCAAAGACACGATGAATCAAATTCTGATGGGAATGATCCAAGGATAGATGCACCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
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| CDS-3UTR CCA 90 bp | CTCTTTTTCAGAATAGAACAATGGCTTCATACCCCGATTGTAAAGACTAGCAGGGTCCATTCAATATGCTaGACTTTTTCATCAATGACC | + |
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Preference number: 4 (lower is better) Translates to: LFFRIEQWLHTPIVKTSRVHSIC*TFSSMT Trigger: GGTCATTGATGAAAAAGTCCAGCATATTGAATGGAC...CCTGCTAGTCTTTACAATCGGGGTATGAAGCCATTGTTCTATTCTGAAAAAGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000135304.8 ENSMUST00000148834.8 |
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| 3UTR CAA 72 bp | AAAGTCTTAAAGGTACGTACTATATTTGGGCAATTTTaGCTCAGCATGAGTGGAAAGATCCGTTGCTGTAAG | + |
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Preference number: 4 (lower is better) Translates to: KVLKVRTIFGQF*LSMSGKIRCCK Trigger: CTTACAGCAACGGATCTTTCCACTCATGCTGAGCAAAAATTGCCCAAATATAGTACGTACCTTTAAGACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135304.8 |
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| 3UTR CAA 72 bp | TGCTTTTCAACTGGTGATGTGACTCTGTTGGTATTCTaGTCTTCTCAATCCAATGTGAAGGTCTTTTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: CFSTGDVTLLVF*SSQSNVKVFCS Trigger: TGAACAAAAGACCTTCACATTGGATTGAGAAGACAAGAATACCAACAGAGTCACATCACCAGTTGAAAAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
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| CDS-3UTR GCA 90 bp | CCAACAGAGAATCACAAAAATGATATCCCATCGACTCTAAATCTTTTGTGCCGAGGAGTCCATTCAATATaGTGGACTTTTTCATCAATG | + |
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Preference number: 4 (lower is better) Translates to: PTENHKNDIPSTLNLLCRGVHSI*WTFSSM Trigger: CATTGATGAAAAAGTCCAGCATATTGAATGGACTCC...TCGGCACAAAAGATTTAGAGTCGATGGGATATCATTTTTGTGATTCTCTGTTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
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| 3UTR CAA 72 bp | AAAGTTGACAATAGTGAATCTGTAGACTATTTCTGCTaGGGTATTAGTGACCTGGAAATAGTACCACTGAGT | + |
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Preference number: 4 (lower is better) Translates to: KVDNSESVDYFC*GISDLEIVPLS Trigger: ACTCAGTGGTACTATTTCCAGGTCACTAATACCCAAGCAGAAATAGTCTACAGATTCACTATTGTCAACTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135304.8 ENSMUST00000148834.8 |
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| 3UTR CAA 72 bp | TTCTTACAAGTTTCTAAAATACATGTCCTATGGTCTTaGTTAAGACTCTTAATCATACGCTGGGAGCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: FLQVSKIHVLWS*LRLLIIRWELD Trigger: GTCCAGCTCCCAGCGTATGATTAAGAGTCTTAACAAAGACCATAGGACATGTATTTTAGAAACTTGTAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
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| 3UTR CAA 72 bp | ACCATAATATATTTCCATGTCATTTGGTTCTACCTTTaGTGGTCTATGCAAGTGGTGTCTTTTAATATGTGC | + |
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Preference number: 4 (lower is better) Translates to: TIIYFHVIWFYL*WSMQVVSFNMC Trigger: GCACATATTAAAAGACACCACTTGCATAGACCACAAAAGGTAGAACCAAATGACATGGAAATATATTATGGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
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| CDS-3UTR CAA 90 bp | TCTCCTGGATGGACCCTTGCAGTCAAAATCACAGCCTTGCGCTTTGAGTCACTAGGTATGGCCACCGTGTaGGGCTCAGTGGACCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: SPGWTLAVKITALRFESLGMATV*GSVDQK Trigger: CTTCTGGTCCACTGAGCCCAACACGGTGGCCATACC...TAGTGACTCAAAGCGCAAGGCTGTGATTTTGACTGCAAGGGTCCATCCAGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135304.8 ENSMUST00000148834.8 |
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| CDS-3UTR CAA 90 bp | CAGGAAGCCTTTCATGATCCAAGAGCTGTTGGTCTCTCCTGGATGGACCCTTGCTACCACTCTCAAACCTaGCTTCAAACACCAGCGTGT | + |
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Preference number: 5 (lower is better) Translates to: QEAFHDPRAVGLSWMDPCYHSQT*LQTPAC Trigger: ACACGCTGGTGTTTGAAGCAAGGTTTGAGAGTGGTA...GCAAGGGTCCATCCAGGAGAGACCAACAGCTCTTGGATCATGAAAGGCTTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135304.8 ENSMUST00000148834.8 |
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| CDS-3UTR CAA 90 bp | GATCTCCTATTCTCTGCCAGCCAATGTTATGGGTTTTGGCCTCTTTTTCAGAATGGTATGGCCACCGTGTaGGGCTCAGTGGACCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: DLLFSASQCYGFWPLFQNGMATV*GSVDQK Trigger: CTTCTGGTCCACTGAGCCCAACACGGTGGCCATACC...ATTCTGAAAAAGAGGCCAAAACCCATAACATTGGCTGGCAGAGAATAGGAGATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000135304.8 ENSMUST00000148834.8 |
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| CDS CCA 90 bp | GGAGTCCATTCAATATGCTGGACTTTTTCATCAATGACCTCACAGTaGTATGGCCACCGTGTTGGGCTCAGTGGACCAGAAGAAGAGACA | + |
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Preference number: 5 (lower is better) Translates to: GVHSICWTFSSMTSQ*YGHRVGLSGPEEET Trigger: TGTCTCTTCTTCTGGTCCACTGAGCCCAACACGGTGGCCATACCACTGTGAGGTCATTGATGAAAAAGTCCAGCATATTGAATGGACTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000115016.8 ENSMUST00000115017.8 ENSMUST00000135304.8 ENSMUST00000148834.8 |
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| CDS CCA 90 bp | CCATTCAATATGCTGGACTTTTTCATCAATGACCTCACAGTGGTATaGCCACCGTGTTGGGCTCAGTGGACCAGAAGAAGAGACACCATA | + |
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Preference number: 5 (lower is better) Translates to: PFNMLDFFINDLTVV*PPCWAQWTRRRDTI Trigger: TATGGTGTCTCTTCTTCTGGTCCACTGAGCCCAACACGGTGGCCATACCACTGTGAGGTCATTGATGAAAAAGTCCAGCATATTGAATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000115016.8 ENSMUST00000115017.8 ENSMUST00000135304.8 ENSMUST00000148834.8 |
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| CDS TCA 90 bp | TATAAATCTCGTGGTCCGCGAAGGCGTGGTACCCATCTTCCTAGCTaGTACTCCAATAAAATTTGTGTAGTCCGAGGGAAGAATGGGTCA | + |
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Preference number: 5 (lower is better) Translates to: YKSRGPRRRGTHLPS*YSNKICVVRGKNGS Trigger: TGACCCATTCTTCCCTCGGACTACACAAATTTTATTGGAGTATCAGCTAGGAAGATGGGTACCACGCCTTCGCGGACCACGAGATTTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000115014.8 ENSMUST00000115016.8 ENSMUST00000115017.8 ENSMUST00000135304.8 ENSMUST00000148834.8 |
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| CDS CCA 90 bp | TACAAAGGTGATCATCTTCAGCTAAATAAACCACAGTATCTTCCTTaGAGTTTGGGTAAACAGGCTCTATTTCCAGGCCTGTCGGGACAT | + |
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Preference number: 5 (lower is better) Translates to: YKGDHLQLNKPQYLP*SLGKQALFPGLSGH Trigger: ATGTCCCGACAGGCCTGGAAATAGAGCCTGTTTACCCAAACTCCAAGGAAGATACTGTGGTTTATTTAGCTGAAGATGATCACCTTTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115016.8 |
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| CDS-3UTR CAA 90 bp | TTCGGAGGTGTCTGTCATAAGATTCCTTTGGGCTTTAAAAGGGAGATTTCTGGTTATCTTCCTTGGAGTTaGGGTAAACAGGCTCTATTT | + |
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Preference number: 5 (lower is better) Translates to: FGGVCHKIPLGFKREISGYLPWS*GKQALF Trigger: AAATAGAGCCTGTTTACCCAAACTCCAAGGAAGATA...ACCAGAAATCTCCCTTTTAAAGCCCAAAGGAATCTTATGACAGACACCTCCGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148834.8 |
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| CDS-3UTR CAA 90 bp | GGTAAAGTTGACAATAGTGAATCTGTAGACTATTTCTGCTTGGGTATTAGTGACTATCTTCCTTGGAGTTaGGGTAAACAGGCTCTATTT | + |
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Preference number: 5 (lower is better) Translates to: GKVDNSESVDYFCLGISDYLPWS*GKQALF Trigger: AAATAGAGCCTGTTTACCCAAACTCCAAGGAAGATA...GTCACTAATACCCAAGCAGAAATAGTCTACAGATTCACTATTGTCAACTTTACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135304.8 ENSMUST00000148834.8 |
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| CDS TCA 72 bp | CGTGGTCCGCGAAGGCGTGGTACCCATCTTCCTAGCTaGTACTCCAATAAAATTTGTGTAGTCCGAGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: RGPRRRGTHLPS*YSNKICVVRGK Trigger: CTTCCCTCGGACTACACAAATTTTATTGGAGTATCAGCTAGGAAGATGGGTACCACGCCTTCGCGGACCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000115014.8 ENSMUST00000115016.8 ENSMUST00000115017.8 ENSMUST00000135304.8 ENSMUST00000148834.8 |
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| CDS CCA 72 bp | AACAGGCTCTATTTCCAGGCCTGTCGGGACATACACTaGCTCAGGGACAAAGGGAGTCCATTCAATATGCTG | + |
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Preference number: 6 (lower is better) Translates to: NRLYFQACRDIH*LRDKGSPFNML Trigger: CAGCATATTGAATGGACTCCCTTTGTCCCTGAGCCAGTGTATGTCCCGACAGGCCTGGAAATAGAGCCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115016.8 ENSMUST00000115017.8 ENSMUST00000135304.8 ENSMUST00000148834.8 |
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| CDS CCA 72 bp | TCAATATGCTGGACTTTTTCATCAATGACCTCACAGTaGTATGGCCACCGTGTTGGGCTCAGTGGACCAGAA | + |
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Preference number: 6 (lower is better) Translates to: SICWTFSSMTSQ*YGHRVGLSGPE Trigger: TTCTGGTCCACTGAGCCCAACACGGTGGCCATACCACTGTGAGGTCATTGATGAAAAAGTCCAGCATATTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000115016.8 ENSMUST00000115017.8 ENSMUST00000135304.8 ENSMUST00000148834.8 |
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| CDS CAA 90 bp | GGTGATCATCTTCAGCTAAATAAACCACAGTATCTTCCTTGGAGTTaGGGTAAACAGGCTCTATTTCCAGGCCTGTCGGGACATACACTG | + |
|
Preference number: 6 (lower is better) Translates to: GDHLQLNKPQYLPWS*GKQALFPGLSGHTL Trigger: CAGTGTATGTCCCGACAGGCCTGGAAATAGAGCCTGTTTACCCAAACTCCAAGGAAGATACTGTGGTTTATTTAGCTGAAGATGATCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115016.8 |
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| CDS CAA 90 bp | AAACCTTGCTTCAAACACCAGCGTGTTGTCACAGTTATCCACAGGTaGTTTCAAGGATGTTCGGTTACCCCCAACTCGGGAATACACAAA | + |
|
Preference number: 6 (lower is better) Translates to: KPCFKHQRVVTVIHR*FQGCSVTPNSGIHK Trigger: TTTGTGTATTCCCGAGTTGGGGGTAACCGAACATCCTTGAAACAACCTGTGGATAACTGTGACAACACGCTGGTGTTTGAAGCAAGGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000115016.8 ENSMUST00000115017.8 ENSMUST00000135304.8 ENSMUST00000148834.8 |
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| CDS CAA 72 bp | CTTCAGCTAAATAAACCACAGTATCTTCCTTGGAGTTaGGGTAAACAGGCTCTATTTCCAGGCCTGTCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LQLNKPQYLPWS*GKQALFPGLSG Trigger: TCCCGACAGGCCTGGAAATAGAGCCTGTTTACCCAAACTCCAAGGAAGATACTGTGGTTTATTTAGCTGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115016.8 ENSMUST00000115017.8 ENSMUST00000135304.8 ENSMUST00000148834.8 |
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| CDS CCA 72 bp | GATCATCTTCAGCTAAATAAACCACAGTATCTTCCTTaGAGTTTGGGTAAACAGGCTCTATTTCCAGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: DHLQLNKPQYLP*SLGKQALFPGL Trigger: CAGGCCTGGAAATAGAGCCTGTTTACCCAAACTCCAAGGAAGATACTGTGGTTTATTTAGCTGAAGATGATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115016.8 |
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