Pregenerated sensors for AFG3L2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024527Ensembl transcript IDs: ENSMUST00000025408.10
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCTTCCCAGCCCCTGGCAGTTGCTGCAGTTGTGAAGCCCTCAGCTaGAATGGAGGCCATCCCCTCCGCCTGGCTGACTCGACGGCCGGC | + |
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Preference number: 1 (lower is better) Translates to: SFPAPGSCCSCEALS*NGGHPLRLADSTAG Trigger: GCCGGCCGTCGAGTCAGCCAGGCGGAGGGGATGGCCTCCATTGCAGCTGAGGGCTTCACAACTGCAGCAACTGCCAGGGGCTGGGAAGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| 3UTR GCA 90 bp | GAGGGCAAGGCTGAGGAAGTCTCCTTCCCAGCCCCTGGCAGTTGCTaGAGTTGTGAAGCCCTCAGCTGCAATGGAGGCCATCCCCTCCGC | + |
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Preference number: 1 (lower is better) Translates to: EGKAEEVSFPAPGSC*SCEALSCNGGHPLR Trigger: GCGGAGGGGATGGCCTCCATTGCAGCTGAGGGCTTCACAACTGCAGCAACTGCCAGGGGCTGGGAAGGAGACTTCCTCAGCCTTGCCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| 3UTR TCA 90 bp | CCAACTGAATTTCACAGCACGTCTGCAGAGATGTCACAGGAGGAATaGCGAGAGGGTGGTAGGAAAAGTCTTCTCCCACGGGACAGGATT | + |
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Preference number: 1 (lower is better) Translates to: PTEFHSTSAEMSQEE*REGGRKSLLPRDRI Trigger: AATCCTGTCCCGTGGGAGAAGACTTTTCCTACCACCCTCTCGTCATTCCTCCTGTGACATCTCTGCAGACGTGCTGTGAAATTCAGTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| 3UTR CAA 90 bp | CCCCTCCGCCTGGCTGACTCGACGGCCGGCTCTGCAGCAGGGCCCTaGTTCAGACTGAAGCCCTGGGAGGACAAAGGAAAGGGGCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: PLRLADSTAGSAAGP*FRLKPWEDKGKGPA Trigger: TGCAGGCCCCTTTCCTTTGTCCTCCCAGGGCTTCAGTCTGAACAAGGGCCCTGCTGCAGAGCCGGCCGTCGAGTCAGCCAGGCGGAGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| 3UTR-3UTR TCA 90 bp | CCAGCCCCTGGCAGTTGCTGCAGTTGTGAAGCCCTCAGCTGCAATGGAGGCCATGGCCCTTGTTCAGACTaGAGCCCTGGGAGGACAAAG | + |
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Preference number: 2 (lower is better) Translates to: PAPGSCCSCEALSCNGGHGPCSD*SPGRTK Trigger: CTTTGTCCTCCCAGGGCTTCAGTCTGAACAAGGGCC...ATGGCCTCCATTGCAGCTGAGGGCTTCACAACTGCAGCAACTGCCAGGGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| 3UTR-3UTR CCA 90 bp | ATCAAAATATTCTTATTAGGACTCCAACTGAATTTCACAGCACGTCTGCAGAGATTCAGACTGAAGCCCTaGGAGGACAAAGGAAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: IKIFLLGLQLNFTARLQRFRLKP*EDKGKG Trigger: CCCCTTTCCTTTGTCCTCCCAGGGCTTCAGTCTGAA...TCTCTGCAGACGTGCTGTGAAATTCAGTTGGAGTCCTAATAAGAATATTTTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| 3UTR CCA 72 bp | AAGCCCTCAGCTGCAATGGAGGCCATCCCCTCCGCCTaGCTGACTCGACGGCCGGCTCTGCAGCAGGGCCCT | + |
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Preference number: 3 (lower is better) Translates to: KPSAAMEAIPSA*LTRRPALQQGP Trigger: AGGGCCCTGCTGCAGAGCCGGCCGTCGAGTCAGCCAGGCGGAGGGGATGGCCTCCATTGCAGCTGAGGGCTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| 3UTR TCA 72 bp | CCTCAGCTGCAATGGAGGCCATCCCCTCCGCCTGGCTaGCTCGACGGCCGGCTCTGCAGCAGGGCCCTTGTT | + |
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Preference number: 3 (lower is better) Translates to: PQLQWRPSPPPG*LDGRLCSRALV Trigger: AACAAGGGCCCTGCTGCAGAGCCGGCCGTCGAGTCAGCCAGGCGGAGGGGATGGCCTCCATTGCAGCTGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| 3UTR-3UTR CAA 90 bp | AAGCCCTCAGCTGCAATGGAGGCCATCCCCTCCGCCTGGCTGACTCGACGGCCGTCTGCAGCAGGGCCCTaGTTCAGACTGAAGCCCTGG | + |
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Preference number: 3 (lower is better) Translates to: KPSAAMEAIPSAWLTRRPSAAGP*FRLKPW Trigger: CCAGGGCTTCAGTCTGAACAAGGGCCCTGCTGCAGA...CGGCCGTCGAGTCAGCCAGGCGGAGGGGATGGCCTCCATTGCAGCTGAGGGCTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| 3UTR TCA 72 bp | TTTCACAGCACGTCTGCAGAGATGTCACAGGAGGAATaGCGAGAGGGTGGTAGGAAAAGTCTTCTCCCACGG | + |
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Preference number: 3 (lower is better) Translates to: FHSTSAEMSQEE*REGGRKSLLPR Trigger: CCGTGGGAGAAGACTTTTCCTACCACCCTCTCGTCATTCCTCCTGTGACATCTCTGCAGACGTGCTGTGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS-3UTR GCA 90 bp | GCTGCAATGGAGGCCATCCCCTCCGCCTGGCTGACTCGACGGCCGGCTCTGCAGCACCGAAGTTGCCTCTaGCGCGCTTCCTTCCCACAG | + |
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Preference number: 4 (lower is better) Translates to: AAMEAIPSAWLTRRPALQHRSCL*RASFPQ Trigger: CTGTGGGAAGGAAGCGCGGCAGAGGCAACTTCGGTG...CTGCAGAGCCGGCCGTCGAGTCAGCCAGGCGGAGGGGATGGCCTCCATTGCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS-3UTR GCA 90 bp | GCAGTTGTGAAGCCCTCAGCTGCAATGGAGGCCATCCCCTCCGCCTGGCTGACTCCCTCCCCCACCACCTaGACCTCCAGAAGGCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: AVVKPSAAMEAIPSAWLTPSPTT*TSRRLG Trigger: CCCCAGCCTTCTGGAGGTGCAGGTGGTGGGGGAGGG...AGTCAGCCAGGCGGAGGGGATGGCCTCCATTGCAGCTGAGGGCTTCACAACTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS-3UTR GCA 90 bp | GCTGCAATGGAGGCCATCCCCTCCGCCTGGCTGACTCGACGGCCGGCTCTGCAGGTACGGTGGGCAACATaGTCAGCAGGAAGGAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: AAMEAIPSAWLTRRPALQVRWAT*SAGRSH Trigger: ATGGCTCCTTCCTGCTGAGCATGTTGCCCACCGTAC...CTGCAGAGCCGGCCGTCGAGTCAGCCAGGCGGAGGGGATGGCCTCCATTGCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS-3UTR GCA 90 bp | AAGCCCTCAGCTGCAATGGAGGCCATCCCCTCCGCCTGGCTGACTCGACGGCCGTTCTCCTGCTCGCTCTaGCCACCGAAGTTGCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: KPSAAMEAIPSAWLTRRPFSCSL*PPKLPL Trigger: CAGAGGCAACTTCGGTGGGCAGAGCGAGCAGGAGAA...CGGCCGTCGAGTCAGCCAGGCGGAGGGGATGGCCTCCATTGCAGCTGAGGGCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS-3UTR TCA 90 bp | TCTCCCACGGGACAGGATTCCACGGGACAGGCCTCGGCAGGTGGTGCTGTCTCTTGGTTTCCCCAACGCTaGAGAGTCCACCCATTCCCC | + |
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Preference number: 4 (lower is better) Translates to: SPTGQDSTGQASAGGAVSWFPQR*RVHPFP Trigger: GGGGAATGGGTGGACTCTTCAGCGTTGGGGAAACCA...AGAGACAGCACCACCTGCCGAGGCCTGTCCCGTGGAATCCTGTCCCGTGGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS-3UTR GCA 90 bp | CTCCCACGGGACAGGATTCCACGGGACAGGCCTCGGCAGGTGGTGCTGTCTCTCAAGAGTGGGTCTGCATaGTCCAGATACCAGCCAGCG | + |
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Preference number: 4 (lower is better) Translates to: LPRDRIPRDRPRQVVLSLKSGSA*SRYQPA Trigger: CGCTGGCTGGTATCTGGAGCATGCAGACCCACTCTT...GAGAGACAGCACCACCTGCCGAGGCCTGTCCCGTGGAATCCTGTCCCGTGGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS-3UTR CCA 90 bp | GCTGCAATGGAGGCCATCCCCTCCGCCTGGCTGACTCGACGGCCGGCTCTGCAGTTCCTCAAGTCGTCCTaGGCACCGGTTGTAATTCTC | + |
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Preference number: 4 (lower is better) Translates to: AAMEAIPSAWLTRRPALQFLKSS*APVVIL Trigger: GAGAATTACAACCGGTGCCCAGGACGACTTGAGGAA...CTGCAGAGCCGGCCGTCGAGTCAGCCAGGCGGAGGGGATGGCCTCCATTGCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS-3UTR TCA 90 bp | TCTCCCACGGGACAGGATTCCACGGGACAGGCCTCGGCAGGTGGTGCTGTCTCTCCTTGCCACGCGGGATaGTGGAGACCTTTAAGAGTG | + |
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Preference number: 4 (lower is better) Translates to: SPTGQDSTGQASAGGAVSPCHAG*WRPLRV Trigger: CACTCTTAAAGGTCTCCATCATCCCGCGTGGCAAGG...AGAGACAGCACCACCTGCCGAGGCCTGTCCCGTGGAATCCTGTCCCGTGGGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS-3UTR TCA 90 bp | GCAGTTGTGAAGCCCTCAGCTGCAATGGAGGCCATCCCCTCCGCCTGGCTGACTCAGCCTTCTTCTCTGTaGGAAGAGCCACCGTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: AVVKPSAAMEAIPSAWLTQPSSL*EEPPSF Trigger: GAAGGACGGTGGCTCTTCTCACAGAGAAGAAGGCTG...AGTCAGCCAGGCGGAGGGGATGGCCTCCATTGCAGCTGAGGGCTTCACAACTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS-3UTR TCA 90 bp | AAGCCCTCAGCTGCAATGGAGGCCATCCCCTCCGCCTGGCTGACTCGACGGCCGTCCTTGTTCCAATCCTaGAGGCCTTCAGGAAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: KPSAAMEAIPSAWLTRRPSLFQS*RPSGRE Trigger: TTCTCTTCCTGAAGGCCTTCAGGATTGGAACAAGGA...CGGCCGTCGAGTCAGCCAGGCGGAGGGGATGGCCTCCATTGCAGCTGAGGGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS-3UTR GCA 90 bp | GCAGTTGTGAAGCCCTCAGCTGCAATGGAGGCCATCCCCTCCGCCTGGCTGACTGAGAATCTTCTTTCTTaGCACGGCGCTTCCCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: AVVKPSAAMEAIPSAWLTENLLS*HGASLP Trigger: GGGGAGGGAAGCGCCGTGGCAAGAAAGAAGATTCTC...AGTCAGCCAGGCGGAGGGGATGGCCTCCATTGCAGCTGAGGGCTTCACAACTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS-3UTR CCA 90 bp | AAGCCCTCAGCTGCAATGGAGGCCATCCCCTCCGCCTGGCTGACTCGACGGCCGATCCTTGTCATCCCATaGGAAGTCACCCTTCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: KPSAAMEAIPSAWLTRRPILVIP*EVTLLE Trigger: TTCCAGAAGGGTGACTTCCCATGGGATGACAAGGAT...CGGCCGTCGAGTCAGCCAGGCGGAGGGGATGGCCTCCATTGCAGCTGAGGGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS-3UTR TCA 90 bp | CTCCCACGGGACAGGATTCCACGGGACAGGCCTCGGCAGGTGGTGCTGTCTCTCCAAAGTCTTTCCACGTaGTTTCTCTCCCAGAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: LPRDRIPRDRPRQVVLSLQSLST*FLSQSS Trigger: AGAGCTCTGGGAGAGAAATCACGTGGAAAGACTTTG...GAGAGACAGCACCACCTGCCGAGGCCTGTCCCGTGGAATCCTGTCCCGTGGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS-3UTR TCA 90 bp | GCTGCAATGGAGGCCATCCCCTCCGCCTGGCTGACTCGACGGCCGGCTCTGCAGGTGAACTTTGAAGATTaGGGCTCGTCCTTTTATGTC | + |
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Preference number: 4 (lower is better) Translates to: AAMEAIPSAWLTRRPALQVNFED*GSSFYV Trigger: GACATAAAAGGACGAGCCTCAATCTTCAAAGTTCAC...CTGCAGAGCCGGCCGTCGAGTCAGCCAGGCGGAGGGGATGGCCTCCATTGCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS-3UTR CCA 90 bp | TCTCCCACGGGACAGGATTCCACGGGACAGGCCTCGGCAGGTGGTGCTGTCTCTCATCCTTTAAGACCTTaGCTGTGGTTTCCCCAACGC | + |
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Preference number: 4 (lower is better) Translates to: SPTGQDSTGQASAGGAVSHPLRP*LWFPQR Trigger: GCGTTGGGGAAACCACAGCCAAGGTCTTAAAGGATG...AGAGACAGCACCACCTGCCGAGGCCTGTCCCGTGGAATCCTGTCCCGTGGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS-3UTR CCA 90 bp | CCAGCCCCTGGCAGTTGCTGCAGTTGTGAAGCCCTCAGCTGCAATGGAGGCCATCATGTCCCCCTGTCGTaGGAGGTCAAAGGAGATCTG | + |
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Preference number: 4 (lower is better) Translates to: PAPGSCCSCEALSCNGGHHVPLS*EVKGDL Trigger: CAGATCTCCTTTGACCTCCCACGACAGGGGGACATG...ATGGCCTCCATTGCAGCTGAGGGCTTCACAACTGCAGCAACTGCCAGGGGCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS-3UTR TCA 90 bp | GCAGTTGTGAAGCCCTCAGCTGCAATGGAGGCCATCCCCTCCGCCTGGCTGACTCATTGGTGGTTGTGTTaGAGCCGTCCATCTCCACAA | + |
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Preference number: 4 (lower is better) Translates to: AVVKPSAAMEAIPSAWLTHWWLC*SRPSPQ Trigger: TTGTGGAGATGGACGGCTTCAACACAACCACCAATG...AGTCAGCCAGGCGGAGGGGATGGCCTCCATTGCAGCTGAGGGCTTCACAACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS-3UTR TCA 90 bp | CAGCCCCTGGCAGTTGCTGCAGTTGTGAAGCCCTCAGCTGCAATGGAGGCCATCTTGTGCCTGCCAGGATaGCCACATTGGTGGTTGTGT | + |
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Preference number: 4 (lower is better) Translates to: QPLAVAAVVKPSAAMEAILCLPG*PHWWLC Trigger: ACACAACCACCAATGTGGTCATCCTGGCAGGCACAA...GATGGCCTCCATTGCAGCTGAGGGCTTCACAACTGCAGCAACTGCCAGGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS-3UTR CCA 90 bp | TCTCCCACGGGACAGGATTCCACGGGACAGGCCTCGGCAGGTGGTGCTGTCTCTCGGGCCCTCTTCTTATaGTGTAGAGTAGAAAAGCGA | + |
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Preference number: 4 (lower is better) Translates to: SPTGQDSTGQASAGGAVSRALFL*CRVEKR Trigger: TCGCTTTTCTACTCTACACCATAAGAAGAGGGCCCG...AGAGACAGCACCACCTGCCGAGGCCTGTCCCGTGGAATCCTGTCCCGTGGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS-3UTR CCA 90 bp | TCTCCCACGGGACAGGATTCCACGGGACAGGCCTCGGCAGGTGGTGCTGTCTCTGGACTTTTCTGTAAATaGTCTGGGACCGAGAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: SPTGQDSTGQASAGGAVSGLFCK*SGTEKL Trigger: CAGCTTCTCGGTCCCAGACCATTTACAGAAAAGTCC...AGAGACAGCACCACCTGCCGAGGCCTGTCCCGTGGAATCCTGTCCCGTGGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS-3UTR GCA 90 bp | GCAGTTGTGAAGCCCTCAGCTGCAATGGAGGCCATCCCCTCCGCCTGGCTGACTGGTCCAATAAAAATCTaGCTGTCAAAGCGGCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: AVVKPSAAMEAIPSAWLTGPIKI*LSKRPG Trigger: ACCAGGCCGCTTTGACAGGCAGATTTTTATTGGACC...AGTCAGCCAGGCGGAGGGGATGGCCTCCATTGCAGCTGAGGGCTTCACAACTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS-3UTR CCA 90 bp | TGCAGCAGGGCCCTTGTTCAGACTGAAGCCCTGGGAGGACAAAGGAAAGGGGCCCCATTATTTCTAGCTTaGCCTCCTCACAGCCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: CSRALVQTEALGGQRKGAPLFLA*PPHSQP Trigger: TGGCTGGCTGTGAGGAGGCCAAGCTAGAAATAATGG...GGCCCCTTTCCTTTGTCCTCCCAGGGCTTCAGTCTGAACAAGGGCCCTGCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS-3UTR CCA 90 bp | CCAGCCCCTGGCAGTTGCTGCAGTTGTGAAGCCCTCAGCTGCAATGGAGGCCATCTATCATCCTCGCAGTaGCCTCACTGTAAGGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: PAPGSCCSCEALSCNGGHLSSSQ*PHCKAS Trigger: AGAAGCCTTACAGTGAGGCCACTGCGAGGATGATAG...ATGGCCTCCATTGCAGCTGAGGGCTTCACAACTGCAGCAACTGCCAGGGGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS-3UTR TCA 90 bp | CCAGCCCCTGGCAGTTGCTGCAGTTGTGAAGCCCTCAGCTGCAATGGAGGCCATGTCGAAGGTGAACTTTaGAGATTGAGGCTCGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: PAPGSCCSCEALSCNGGHVEGEL*RLRLVL Trigger: AAGGACGAGCCTCAATCTTCAAAGTTCACCTTCGAC...ATGGCCTCCATTGCAGCTGAGGGCTTCACAACTGCAGCAACTGCCAGGGGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS-3UTR GCA 90 bp | AGTTGCTGCAGTTGTGAAGCCCTCAGCTGCAATGGAGGCCATCCCCTCCGCCTGATCCTGTCCAGCAGCTaGTCCTTTGTGTACAGATAC | + |
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Preference number: 4 (lower is better) Translates to: SCCSCEALSCNGGHPLRLILSSS*SFVYRY Trigger: GTATCTGTACACAAAGGAGCAGCTGCTGGACAGGAT...CAGGCGGAGGGGATGGCCTCCATTGCAGCTGAGGGCTTCACAACTGCAGCAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS-3UTR GCA 90 bp | TGCAGCAGGGCCCTTGTTCAGACTGAAGCCCTGGGAGGACAAAGGAAAGGGGCCCGTCTAAGCTGCCAGTaGCTTCCACAAATTCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: CSRALVQTEALGGQRKGARLSCQ*LPQILH Trigger: ATGAAGAATTTGTGGAAGGCACTGGCAGCTTAGACG...GGCCCCTTTCCTTTGTCCTCCCAGGGCTTCAGTCTGAACAAGGGCCCTGCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS-3UTR TCA 90 bp | TGCAGCAGGGCCCTTGTTCAGACTGAAGCCCTGGGAGGACAAAGGAAAGGGGCCCATCAATCTCATCAATaGAGAGAATGCAAGGCGCAT | + |
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Preference number: 4 (lower is better) Translates to: CSRALVQTEALGGQRKGAHQSHQ*RECKAH Trigger: ATGCGCCTTGCATTCTCTTCATTGATGAGATTGATG...GGCCCCTTTCCTTTGTCCTCCCAGGGCTTCAGTCTGAACAAGGGCCCTGCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS-3UTR CCA 90 bp | AGTTGCTGCAGTTGTGAAGCCCTCAGCTGCAATGGAGGCCATCCCCTCCGCCTGACTGTCCAGCTTCAATaGTCGAAGGTGAACTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: SCCSCEALSCNGGHPLRLTVQLQ*SKVNFE Trigger: TTCAAAGTTCACCTTCGACCATTGAAGCTGGACAGT...CAGGCGGAGGGGATGGCCTCCATTGCAGCTGAGGGCTTCACAACTGCAGCAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS-3UTR CCA 90 bp | CCAGCCCCTGGCAGTTGCTGCAGTTGTGAAGCCCTCAGCTGCAATGGAGGCCATACTTTTCAAATCCTTTaGGAGGTCGAGAACAGAATC | + |
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Preference number: 4 (lower is better) Translates to: PAPGSCCSCEALSCNGGHTFQIL*EVENRI Trigger: GATTCTGTTCTCGACCTCCCAAAGGATTTGAAAAGT...ATGGCCTCCATTGCAGCTGAGGGCTTCACAACTGCAGCAACTGCCAGGGGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS-3UTR GCA 90 bp | ATCAAAATATTCTTATTAGGACTCCAACTGAATTTCACAGCACGTCTGCAGAGATTGAGTGTGTTCTCCTaGTCGCTCTGCCCACCGAAG | + |
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Preference number: 4 (lower is better) Translates to: IKIFLLGLQLNFTARLQRLSVFS*SLCPPK Trigger: CTTCGGTGGGCAGAGCGAGCAGGAGAACACACTCAA...TCTCTGCAGACGTGCTGTGAAATTCAGTTGGAGTCCTAATAAGAATATTTTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS-3UTR CCA 90 bp | ATCAAAATATTCTTATTAGGACTCCAACTGAATTTCACAGCACGTCTGCAGAGAGTCTCGGACTCTGGCTaGACCAACGCCAACAAACAT | + |
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Preference number: 4 (lower is better) Translates to: IKIFLLGLQLNFTARLQRVSDSG*TNANKH Trigger: ATGTTTGTTGGCGTTGGTCCAGCCAGAGTCCGAGAC...TCTCTGCAGACGTGCTGTGAAATTCAGTTGGAGTCCTAATAAGAATATTTTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS-3UTR TCA 90 bp | ATCAAAATATTCTTATTAGGACTCCAACTGAATTTCACAGCACGTCTGCAGAGAAGAGAAAGTACATCCTaGAATCCTTGTCATCCCATG | + |
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Preference number: 4 (lower is better) Translates to: IKIFLLGLQLNFTARLQRRESTS*NPCHPM Trigger: CATGGGATGACAAGGATTTCAGGATGTACTTTCTCT...TCTCTGCAGACGTGCTGTGAAATTCAGTTGGAGTCCTAATAAGAATATTTTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS-3UTR CAA 90 bp | TCTCCCACGGGACAGGATTCCACGGGACAGGCCTCGGCAGGTGGTGCTGTCTCTACATTGGTGGTTGTGTaGAAGCCGTCCATCTCCACA | + |
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Preference number: 5 (lower is better) Translates to: SPTGQDSTGQASAGGAVSTLVVV*KPSIST Trigger: TGTGGAGATGGACGGCTTCAACACAACCACCAATGT...AGAGACAGCACCACCTGCCGAGGCCTGTCCCGTGGAATCCTGTCCCGTGGGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS-3UTR CAA 90 bp | CCAGCCCCTGGCAGTTGCTGCAGTTGTGAAGCCCTCAGCTGCAATGGAGGCCATTCCATTATTTCTAGCTaGGCCTCCTCACAGCCAGCC | + |
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Preference number: 5 (lower is better) Translates to: PAPGSCCSCEALSCNGGHSIISS*ASSQPA Trigger: GGCTGGCTGTGAGGAGGCCAAGCTAGAAATAATGGA...ATGGCCTCCATTGCAGCTGAGGGCTTCACAACTGCAGCAACTGCCAGGGGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS-3UTR CAA 90 bp | GCAGTTGTGAAGCCCTCAGCTGCAATGGAGGCCATCCCCTCCGCCTGGCTGACTCATCTGAAAGGTGTCTaGCAGCAATCAAAGCAGCTT | + |
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Preference number: 5 (lower is better) Translates to: AVVKPSAAMEAIPSAWLTHLKGV*QQSKQL Trigger: AAGCTGCTTTGATTGCTGCAAGACACCTTTCAGATG...AGTCAGCCAGGCGGAGGGGATGGCCTCCATTGCAGCTGAGGGCTTCACAACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS GCA 90 bp | TGGTCTCAACAGAGCTGGATCCAGGATGTCTGGTCGATTTGTGCCTaGCAGGATGACCACATTGGTGGTTGTGTTGAAGCCGTCCATCTC | + |
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Preference number: 5 (lower is better) Translates to: WSQQSWIQDVWSICA*QDDHIGGCVEAVHL Trigger: GAGATGGACGGCTTCAACACAACCACCAATGTGGTCATCCTGGCAGGCACAAATCGACCAGACATCCTGGATCCAGCTCTGTTGAGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS-3UTR CAA 90 bp | CAGCCCCTGGCAGTTGCTGCAGTTGTGAAGCCCTCAGCTGCAATGGAGGCCATCATCAAAGCAGCTTCATaGCAGACATTGGCAACATCA | + |
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Preference number: 5 (lower is better) Translates to: QPLAVAAVVKPSAAMEAIIKAAS*QTLATS Trigger: TGATGTTGCCAATGTCTGCAATGAAGCTGCTTTGAT...GATGGCCTCCATTGCAGCTGAGGGCTTCACAACTGCAGCAACTGCCAGGGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS-3UTR CAA 90 bp | CAGCCCCTGGCAGTTGCTGCAGTTGTGAAGCCCTCAGCTGCAATGGAGGCCATCTACTTTTCAAATCCTTaGGGAGGTCGAGAACAGAAT | + |
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Preference number: 5 (lower is better) Translates to: QPLAVAAVVKPSAAMEAIYFSNP*GGREQN Trigger: ATTCTGTTCTCGACCTCCCAAAGGATTTGAAAAGTA...GATGGCCTCCATTGCAGCTGAGGGCTTCACAACTGCAGCAACTGCCAGGGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS GCA 90 bp | TTTTTCTCCAAGCCTCCAATCACTCGCTCAATCGCTTGTTCGAAGTaGTTCTCATTAATGGCATCTGAAAGGTGTCTTGCAGCAATCAAA | + |
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Preference number: 5 (lower is better) Translates to: FFSKPPITRSIACSK*FSLMASERCLAAIK Trigger: TTTGATTGCTGCAAGACACCTTTCAGATGCCATTAATGAGAAGCACTTCGAACAAGCGATTGAGCGAGTGATTGGAGGCTTGGAGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS CCA 90 bp | TCTTCATATGTGGACTTTTCTGTAAATGGTCTGGGACCGAGAAGCTaGACCATGTCATTCTTGTCTAGGACTTCCTTTTCTAACAGTAAG | + |
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Preference number: 5 (lower is better) Translates to: SSYVDFSVNGLGPRS*TMSFLSRTSFSNSK Trigger: CTTACTGTTAGAAAAGGAAGTCCTAGACAAGAATGACATGGTCCAGCTTCTCGGTCCCAGACCATTTACAGAAAAGTCCACATATGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS GCA 72 bp | CGGCCGCCCAGAGTCATGCACATCCTGTCCAGCAGCTaGTCCTTTGTGTACAGATACTGCTCCTTGGGCAAG | + |
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Preference number: 6 (lower is better) Translates to: RPPRVMHILSSS*SFVYRYCSLGK Trigger: CTTGCCCAAGGAGCAGTATCTGTACACAAAGGAGCAGCTGCTGGACAGGATGTGCATGACTCTGGGCGGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS GCA 72 bp | AGAAGATCTCCTCGGAGACACGGCCGCCCAGAGTCATaGACATCCTGTCCAGCAGCTGCTCCTTTGTGTACA | + |
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Preference number: 6 (lower is better) Translates to: RRSPRRHGRPES*TSCPAAAPLCT Trigger: TGTACACAAAGGAGCAGCTGCTGGACAGGATGTGCATGACTCTGGGCGGCCGTGTCTCCGAGGAGATCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS GCA 72 bp | CAGAGCTGGATCCAGGATGTCTGGTCGATTTGTGCCTaGCAGGATGACCACATTGGTGGTTGTGTTGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: QSWIQDVWSICA*QDDHIGGCVEA Trigger: GGCTTCAACACAACCACCAATGTGGTCATCCTGGCAGGCACAAATCGACCAGACATCCTGGATCCAGCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS GCA 72 bp | GGAGGTCAAAGGAGATCTGCCCCACTTTCTCGTTCATaGCAAACTGAACGATCTGGGCATAGGCACTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: GGQRRSAPLSRS*QTERSGHRHSG Trigger: CCCAGAGTGCCTATGCCCAGATCGTTCAGTTTGGCATGAACGAGAAAGTGGGGCAGATCTCCTTTGACCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS CCA 72 bp | TGGGGGTCCAATAAAAATCTGCCTGTCAAAGCGGCCTaGTCTCAACAGAGCTGGATCCAGGATGTCTGGTCG | + |
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Preference number: 6 (lower is better) Translates to: WGSNKNLPVKAA*SQQSWIQDVWS Trigger: CGACCAGACATCCTGGATCCAGCTCTGTTGAGACCAGGCCGCTTTGACAGGCAGATTTTTATTGGACCCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS GCA 72 bp | GAAGGCCTTCAGGAAGAGAAGTGTCCTCGTCTAAGCTaGCAGTGCCTTCCACAAATTCTTCATATGTGGACT | + |
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Preference number: 6 (lower is better) Translates to: EGLQEEKCPRLS*QCLPQILHMWT Trigger: AGTCCACATATGAAGAATTTGTGGAAGGCACTGGCAGCTTAGACGAGGACACTTCTCTTCCTGAAGGCCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS CAA 90 bp | TTTTCTGTAAATGGTCTGGGACCGAGAAGCTGGACCATGTCATTCTaGTCTAGGACTTCCTTTTCTAACAGTAAGAGAGCGACCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: FSVNGLGPRSWTMSF*SRTSFSNSKRATFS Trigger: GGAGAAGGTCGCTCTCTTACTGTTAGAAAAGGAAGTCCTAGACAAGAATGACATGGTCCAGCTTCTCGGTCCCAGACCATTTACAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS GCA 72 bp | AAGCCTCCAATCACTCGCTCAATCGCTTGTTCGAAGTaGTTCTCATTAATGGCATCTGAAAGGTGTCTTGCA | + |
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Preference number: 6 (lower is better) Translates to: KPPITRSIACSK*FSLMASERCLA Trigger: TGCAAGACACCTTTCAGATGCCATTAATGAGAAGCACTTCGAACAAGCGATTGAGCGAGTGATTGGAGGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS CCA 72 bp | GTGGACTTTTCTGTAAATGGTCTGGGACCGAGAAGCTaGACCATGTCATTCTTGTCTAGGACTTCCTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: VDFSVNGLGPRS*TMSFLSRTSFS Trigger: AGAAAAGGAAGTCCTAGACAAGAATGACATGGTCCAGCTTCTCGGTCCCAGACCATTTACAGAAAAGTCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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| CDS CCA 72 bp | TTCCACAAATTCTTCATATGTGGACTTTTCTGTAAATaGTCTGGGACCGAGAAGCTGGACCATGTCATTCTT | + |
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Preference number: 6 (lower is better) Translates to: FHKFFICGLFCK*SGTEKLDHVIL Trigger: AAGAATGACATGGTCCAGCTTCTCGGTCCCAGACCATTTACAGAAAAGTCCACATATGAAGAATTTGTGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025408.10 |
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